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Gordonibacter pamelaeae (species) Products
Samples do not report on all of the bacteria producing end products-- numbers are rough estimates from available data.
List may be truncated if there is a very large number
Taxon Rank above species are aggregations of the species under it. Only some children may produce the end product.
Products are based on genes in bacteria. Not all bacteria have been sequenced.
End Product
Enzymes Producing
Species Producing
(+)-(1E,4E,6S,7R)-germacra-1(10),4-dien-6-ol
1
(+)-(2S,3R,9R)-pristinol
1
(+)-(S)-carvone
1
(+)-5-oxo-1,2-campholide
1
(+)-6-hydroxypinoresinol
1
(+)-beta-caryophyllene
1
(+)-corvol ether A
1
(+)-corvol ether B
1
(+)-epi-isozizaene
1
(+)-isoafricanol
1
(+)-kolavelool
1
(+)-lariciresinol
1
(+)-O-methylkolavelool
1
(+)-pinoresinol
1
(-)-5-oxo-1,2-campholide
1
(-)-carvone
2
(-)-geosmin
1
(-)-lariciresinol
1
(-)-perillyl alcohol
2
(-)-pinoresinol
1
(1,4-alpha-D-galacturonosyl)n
1
(10aS)-10,10a-dihydrophenazine-1-carboxylate
1
(10aS)-5,10-dihydrophenazine-1-carboxylate
1
(1R,10aS)-1,4,10,10a-tetrahydrophenazine-1,6-dicarboxylate
1
(1R,2R)-3-chlorocyclohexa-3,5-diene-1,2-diol
1
(1R,2S)-1,2-dihydronaphthalene-1,2-diol
1
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
1
(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate
1
(1R,6S)-1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate
1
(1R,6S)-6-amino-5-oxocyclohex-2-ene-1-carboxylate
1
(2'R)-2'-hydroxydihydroceramide
1
(2,3-dihydroxybenzoyl)adenylate
1
(2-amino-1-hydroxyethyl)phosphonate
1
(25R)-26-oxocholest-4-en-3-one
1
(25S)-26-oxocholest-4-en-3-one
1
(25S)-3-oxocholest-4-en-26-oate
1
(25S)-3-oxocholest-4-en-26-oyl-CoA
1
(2E)-2-enoyl-CoA
1
(2E)-alk-2-enoyl-CoA
1
(2E,4E)-2,4-dienoyl-CoA
2
(2E,4E,6E)-2,6-dimethylocta-2,4,6-trienedial
1
(2E,4Z)-2,4-dienoyl-CoA
2
(2R)-2-amino-4-oxopentanoate
3
(2R)-2-hydroxybutane-1,2,4-tricarboxylate
1
(2S)-2-amino-4-{[(1R)-1-carboxy-2-(1H-imidazol-4-yl)ethyl]amino}butanoate
1
(2S)-3-(4-hydroxyphenyl)-2-isocyanopropanoate
1
(2S,3S)-2-hydroxybutane-1,2,3-tricarboxylate
1
(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate
1
(3,4-dihydroxybenzoyl)adenylate
1
(3-phenoxyphenyl)methanol
1
(3E)-2-oxohex-3-enedioate
2
(3R)-3,4-epoxy-3-methylbut-1-ene
1
(3R)-3-hydroxy-4-oxobutanoate
1
(3S)-2,3-epoxy-2,3-dihydrosqualene
4
(3S)-2-oxo-3-phenylbutanoate
2
(3S)-3-hydroxy-L-enduracididine
1
(3S)-3-hydroxy-N6,N6,N6-trimethyl-L-lysine
1
(3S)-6-acetamido-3-aminohexanoate
1
(3S,3'S)-astaxanthin
1
(3S,5S)-3,5-diaminohexanoate
1
(3Z)-4-(2-carboxyphenyl)-2-oxobut-3-enoate
1
(4,5-dihydro-5-oxofuran-2-yl)-acetate
1
(4R)-4-hydroxy-N-[(2R)-2-hydroxy-very-long-chain-acyl]-1-O-{[6-O-(alpha-D-mannosyl)-1D-myo-inositol-1-O-yl]hydroxyphosphoryl}sphinganine
1
(4R)-4-hydroxysphinganine ceramide
1
(5aS)-5,5a-dihydrophenazine-1,6-dicarboxylate
1
(5R)-albaflavenol
1
(5Z,8Z,11Z,13E)-(15S)-15-hydroperoxyicosa-5,8,11,13-tetraenoate
1
(6E)-8-hydroxylinalool
1
(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate
1
(9Z)-hexadec-9-enoyl-Kdo2-lipid IVA
1
(acetamidomethyl)phosphonate
1
(deoxyribonucleotide)n+m
4
(E)-1-(L-cysteinylglycin-S-yl)-N-hydroxy-omega-(methylsulfanyl)alkan-1-imine
1
(E)-beta-farnesene
1
(L-cysteinylglycine)-S-conjugate
1
(R)-citramalyl-CoA
1
(R)-mandelate
2
(ribonucleotide)n-3'-(5'-diphosphoguanosine)
1
(S)-2,3,4,5-tetrahydropyridine-2-carboxylate
4
(S)-4-Hydroxy-5-phosphonooxypentane-2,3-dione
1
(S)-allantoin
1
(Z)-2-methylaminoacrylate
1
(Z)-3-oxooctadec-11-enoyl-[acyl-carrier protein]
1
(Z)-3-ureidoacrylate
1
[(1->2)-beta-D-glucosyl]n-1
1
[(1->2)-beta-D-mannosyl]n-1
1
[acetyl-CoA C-acetyltransferase]-S-acetyl-L-cysteine
1
[amino-group carrier protein]-C-terminal-[N-(1-carboxy-5-oxopentyl)-L-glutamine]
1
[beta-D-galactofuranosyl-(1->5)-beta-D-galactofuranosyl-(1->6)]14-beta-D-galactofuranosyl-(1->5)-beta-D-galactofuranosyl-(1->4)-alpha-L-rhamnopyranosyl-(1->3)-N-acetyl-alpha-D-glucosaminyl-diphospho-trans,octacis-decaprenol
1
[Co(I) methylamine-specific corrinoid protein]
1
[collagen]-(5R)-5-O-(beta-D-galactosyl)-5-hydroxy-L-lysine
1
[corrinoid adenosyltransferase]-cob(I)alamin (spontaneous)
1
[dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylpropanoyl)dihydrolipoyllysine
1
[DsbD protein] carrying a disulfide bond
1
[enzyme]-lysine
1
[L-Asp(4-L-Arg)]n-1
1
[LarE]-dehydroalanine
1
[prolipoprotein]-S-1,2-diacyl-sn-glyceryl-L-cysteine
1
[protein] carrying a disulfide bond
2
[protein]-(S)-2-(C-substituted-aminomethyl)-4-acyl-1,3-thiazole
1
[protein]-3-O-(N-acetyl-beta-D-glucosaminyl)-L-serine
1
[protein]-L-lysine
3
[RNA ligase]-Ntau-(5'-guanosyl-phosphono)-L-histidine
1
1,2-diacyl-sn-glycerol
9
1,4-benzoquinone
1
17-(4-hydroxyphenyl)heptadecanoyl-[(4-hydroxyphenyl)alkanoate synthase]
1
1D-myo-inositol 1,2,3,5,6-pentakisphosphate
1
2''-nucleotidylgentamicin
1
2'-deoxyribonucleoside 5'-triphosphate
1
2'-O-methyluridine2479 in 23S rRNA
1
2'-O-methyluridine32 in tRNA
1
2,3-bis-(O-geranylgeranyl)-sn-glycerol 1-phosphate
2
2,3-dihydroxy-p-cumate
1
2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose
1
2,4-dibromophenol
1
2-(alpha-D-mannosyl)-3-phosphoglycerate
1
2-hydroxy-7-methoxy-5-methyl-1-naphthoate
1
2-O-(6-phospho-alpha-D-mannopyranosyl)-D-glycerate[side 2]
1
2-O-(beta-D-mannosyl)-bis(myo-inositol) 1,3'-phosphate
1
2-thiouracil34 in tRNA
1
23S rRNA pseudouridine746
1
2D-2,3,5/4,6-pentahydroxycyclohexanone
2
3-dehydro-D-glucose 6-phosphate
2
3-methylbutanol
1
3-oxo-5beta-cholan-24-oate
4
4-(1-D-ribitylamino)-5-amino-2,6-dihydroxypyrimidine
1
4-hydroxyphenyl acetate
1
4-nitrocatechol
1
4-O-(2-N-acetyl-beta-D-glucosaminyl-D-ribitylphospho)n-di[(2R)-1-glycerophospho]-N-acetyl-beta-D-mannosaminyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol
1
5'-(5'-diphosphoadenosine)-(ribonucleotide)m
1
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
1
5alpha-cholesta-7,24-dien-3beta-ol
1
6-phospho-2-dehydro-D-gluconate
2
6-sulfo-D-quinovose
1
adenine
12
cis-aconitate
2
cis-cyclohexa-3,5-diene-1,2-diol
1
citrate
4
CMP
41
CMP-3-deoxy-D-glycero-D-galacto-non-2-ulopyranosonate
1
CMP-5,7-diacetamido-3,5,7,9-tetradeoxy-L-glycero-alpha-L-manno-2-nonulopyranosonic acid
1
CMP-N,N'-diacetyllegionaminate
1
CMP-N-acylneuraminate
1
CMP-N-glycoloylneuraminate
1
CO2
401
Co2+
1
CoA
253
CoA [cpd:<a href="/dbget-bin/www_bget?cpd:C00010">C00010</a>]
1
CoA-disulfide
1
dTDP-4-acetamido-4,6-dideoxy-alpha-D-glucose
1
keratan 6'-sulfate
1
N2-methylguanine1207 in 16S rRNA
1
NDP
5
nitrous oxide
2
peptide-3-hydroxy-L-aspartate
1
phospholipid cyclopropane fatty acid
1
R-S-S-R
1
RCHO
2
reduced [2Fe-2S] ferredoxin
1
validoxylamine A
1
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