Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank Bacteria BiomeSight
4653 Samples		 Thryve
1543 Samples		 uBiome
802 Samples		 Thorne
289 Samples		 custom
76 Samples		 SequentiaBiotech
35 Samples		 CosmosId
32 Samples		 es-xenogene
32 Samples		 BiomeSightRdp
31 Samples		 Microba
28 Samples		 AmericanGut
15 Samples		 Tiny
12 Samples		 Medivere
8 Samples		 GanzimmunDiag
6 Samples		 GutScan
5 Samples		 Precision
4 Samples		 CerbaLab
3 Samples		 vitract
2 Samples		 bugspeak
1 Samples		 Microba1
1 Samples
biotype Mycobacterium tuberculosis variant caprae 1
biotype Mycobacterium tuberculosis variant pinnipedii 342
biotype Toxoplasma gondii type III 1
clade 50 kb inversion clade 1082 11 4 2 1 1 3
clade Acanthomorphata 6
clade Acidobacteriota subdivision 22 31
clade Alveolata 2 5 2 1 1
clade Amniota 63 1 1 18
clade Amoebozoa 1 1 2 2 1
clade ant endosymbionts 1139 12 4 2 6
clade ant, tsetse, mealybug, aphid, etc. endosymbionts 1169 1 13 4 2 6 2
clade aphid secondary symbionts 75 1 1 1
clade Archamoebae 1 1 2
clade Archelosauria 14 13
clade Archosauria 14 13
clade Asgard group 1 2
clade asterids 18 16 22
clade Bacillariophycidae 2
clade Bacteria candidate phyla 199 90 7 6 4 1 2 1
clade Bacteroidota/Chlorobiota group 4653 1543 788 111 74 35 32 32 31 27 15 11 7 6 4 3 3 2 1 1
clade Bilateria 1215 8 11 61 1 1 6 22 1
clade Blastocystis sp. subtypes 3 1 1 1
clade Boreoeutheria 55 1 1 16
clade Caldisericota/Cryosericota group 4 9 5 1 1 1
clade campanulids 22
clade Candida/Lodderomyces clade 45 9 8
clade Candidatus Dependentiae 3 3 1
clade Candidatus Peribacteraceae 20
clade Candidatus Uzinura 1
clade Centramoebida 1 2 1
clade Coelurosauria 14 13
clade core chlorophytes 2 1 2
clade core genistoids 1083 11 25 2 1 1 3
clade CRESS viruses 1
clade CRuMs 1
clade CS clade 2 1 2
clade Ctenosquamata 6
clade CUG-Ser1 clade 64 9 12
clade CUG-Ser2 clade 1
clade Cyanobacteriota/Melainabacteria group 4451 1088 31 97 15 17 6 25 1 6 1 7 6 3 2 2 1
clade delta/epsilon subdivisions 4599 1491 691 98 44 33 20 29 31 21 13 1 7 3 2 1 1
clade Deuterostomia 5 63 1 2 20
clade DHVE2 group 2
clade Dicondylia 537 7 11 1 1 4 22 1
clade Dictyostelia 1 2 2
clade Dinosauria 14 13
clade Dipnotetrapodomorpha 5 35 1 2 20
clade Discoba 1 1
clade Ditrysia 20
clade dothideomyceta 32 9 2 1 1 1
clade DPANN group 1 1
clade Duplodnaviria 33 10 12 4 1
clade Ecdysozoa 537 7 11 1 1 6 22 1
clade Elliptochloris clade 1 1
clade Embryophyta 1092 11 18 15 2 1 22 3 2
clade Euacanthomorphacea 1
clade eudicotyledons 1092 11 18 16 2 1 22 3 2
clade Eumetazoa 1238 8 11 33 1 1 6 22 1
clade Euphyllophyta 1092 11 18 16 2 1 22 3 2
clade Eurypterygia 6
clade Euteleostomi 5 33 1 2 20
clade Eutheria 27 1 1 16
clade fabids 1081 11 1 2 1 1 3
clade FCB group 4653 1543 788 110 74 35 32 32 31 28 15 11 7 6 4 3 3 2 1 1
clade Gadariae 6
clade genistoids sensu lato 1082 11 4 2 1 1 3
clade Gnathostomata 5 32 1 2 20
clade Gunneridae 1092 11 18 17 2 1 22 3 2
clade Haptista 1 1
clade Heliantheae alliance 22
clade Heteroconchia 609 1
clade Human endogenous retroviruses 1
clade lamiids 18 16
clade leotiomyceta 95 10 2 2 1 1 1
clade lice endosymbionts 1
clade Liliopsida 1
clade Lophotrochozoa 841 1 1 3 2
clade Luna-1 subcluster 3 3 1 40 3
clade malvids 1
clade Mandibulata 537 7 11 1 1 4 22 1
clade mealybug secondary endosymbionts 1
clade Mesangiospermae 1092 11 18 16 2 1 22 3 2
clade Metamonada 1 1 4 1
clade Methanomada group 1138 330 220 31 34 15 3 22 17 4 9 1 7 6 2 2 2 1 1 1
clade Microgenomates group 2 1
clade Monodnaviria 25 12 23 7
clade Neoteleostei 6
clade Nitrospinota/Tectimicrobiota group 20 16 2
clade Obtectomera 20
clade OCC clade 1
clade Ochrophyta 2 1
clade OM182 clade 1
clade OMG group 1
clade Opalozoa 2 5 2 1 2 1
clade Opisthokonta 1238 8 11 78 14 1 16 22 10 2 6 3 3 1
clade Osteoglossocephalai 5
clade OUU clade 1
clade Ovalentaria 1
clade Panarthropoda 537 7 11 1 1 4 22 1
clade Pancrustacea 537 7 11 1 1 4 22 1
clade Paracanthopterygii 6
clade Patescibacteria group 4 3 1 1 1 1
clade Pentapetalae 1092 11 18 19 2 1 22 3 2
clade Percomorphaceae 1
clade Pinnipedia 11
clade Pithoviruses 1
clade Protostomia 1210 8 11 1 1 6 22 1
clade Prymnesiophyceae 1
clade PVC group 4379 1345 566 98 41 28 19 31 23 10 11 5 5 6 4 2 3 2 1 1
clade PX clade 1 1
clade Rhizaria 2 2 1
clade Riboviria 9 1 1
clade rosids 1081 11 2 2 1 1 3
clade saccharomyceta 95 14 12 2 2 6 3 1
clade Sar 2 7 7 2 1 2 2 1 1
clade SAR116 cluster 1 1
clade Sauria 14 13
clade Saurischia 14 13
clade Sauropsida 14 13
clade Silicofilosea 1
clade sordariomyceta 95 10 2 1 1 1
clade Spermatophyta 1092 11 18 16 2 1 22 3 2
clade Spiralia 841 1 1 3 2
clade Spirocuta 1
clade Stenosarchaea group 30 6 10 37 9 17 1 2 1
clade Stramenopiles 2 5 2 1 2 1 1
clade sulfur-oxidizing symbionts 1 1 2 1
clade TACK group 48 9 19 5 1 1 1 2 1 1
clade TCBD clade 1
clade Teleostomi 5 33 1 2 20
clade Terrabacteria group 4653 1543 790 111 75 35 32 32 31 28 15 11 7 6 4 3 3 2 1 1
clade Tetrapoda 5 63 1 2 20
clade Theria 27 1 1 16
clade Theropoda 14 13
clade Tracheophyta 1092 11 18 16 2 1 22 3 2
clade Trypanosoma with unspecified subgenus 1
clade UAG-readthrough crAss clade 8 1
clade Varidnaviria 3 1
clade Vertebrata 5 32 1 2 20
clade Zeiogadaria 6
class Acidimicrobiia 733 637 2 192 3 1 5 1 3 2
class Acidithiobacillia 39 230 1 1 2
class Aconoidasida 5 2 1
class Actinomycetes 4637 1542 783 107 60 34 32 32 31 22 14 11 7 6 2 4 3 2 1 1
class Actinopteri 6
class Agaricomycetes 199 2 1 1 1
class Alphaproteobacteria 4572 1463 438 275 17 31 4 18 31 21 6 1 7 4 3 3 2 1
class Amphibia 5 1 1 2
class Anaerolineae 1917 370 9 248 1 5 4 1 7 2
class Anthozoa 35 2 1
class Aquificia 36 143 222 3 4 6 2 1
class Archaeoglobi 1 3 2 4 2 1
class Ardenticatenia 27 209 3 1 1
class Arfiviricetes 3
class Armatimonadia 2 3 2
class Atribacteria 2
class Aves 14 13
class Bacillariophyceae 2
class Bacilli 4653 1543 786 284 65 35 32 32 31 26 15 11 7 6 4 4 3 2 1 1
class Bacteriovoracia 24 132 1 72 1 1 4 2
class Bacteroidia 4653 1543 788 288 74 35 32 32 31 27 15 11 7 6 4 4 3 2 1 1
class Balneolia 253 829 20 2 7 3 1 1 2
class Bangiophyceae 2 1
class Bdellovibrionia 71 139 1 85 1 3 1 1 2
class Betaproteobacteria 4632 1519 746 275 42 35 30 26 31 23 15 7 7 6 4 3 2 2 1 1
class Bigyra 2 27 2 1 2 1
class Bivalvia 609 1
class Blastocatellia 203 1 36 3 2
class Caldilineae 1486 609 56 2 3 2 7 2
class Caldisericia 4 9 10 1 1 1
class Calditrichia 1082 13 60 1 5 7 2
class Candidatus Babeliae 3 3 1
class Candidatus Brocadiia 39 37 1 2 1
class Candidatus Cloacimonadia 5 2 2
class Candidatus Dadabacteria 2
class Candidatus Desulfofervidia 1 1
class Candidatus Izimaplasma 40 1 2
class Candidatus Lokiarchaeia 1 2
class Candidatus Methanoliparia 1
class Candidatus Nanoarchaeia 1
class Candidatus Nanohalobia 1
class Candidatus Nanosyncoccalia 1
class Candidatus Peribacteria 29
class Candidatus Saccharimonadia 7 2 1 2
class Candidatus Sumerlaeia 14
class Candidatus Thermofonsia 2
class Candidatus Uabimicrobiia 1 1
class Caudoviricetes 209 10 12 4 1
class Cestoda 3 2
class Chitinispirillia 19 1
class Chitinivibrionia 2
class Chitinophagia 2412 1237 5 270 1 5 5 13 1 1 6 3 1 1
class Chlamydiia 462 141 244 1 2 1 1 2 1 1
class Chlorarachniophyceae 2 1 1
class Chlorobiia 3912 120 1 268 5 5 23 2 2
class Chloroflexia 11 111 2 228 1 14 2 1 2
class Chlorophyceae 2 1 2
class Chloropicophyceae 2
class Choanoflagellata 2
class Chromadorea 5 2
class Chrysiogenia 897 25 85 1 1 2 1
class Chthonomonadia 7 168 13 3
class Chytridiomycetes 17 1
class Clostridia 4653 1543 790 288 73 35 32 32 31 27 15 11 7 6 4 4 3 2 1 1
class Compsopogonophyceae 1
class Conoidasida 13 5 2 1
class Coprothermobacteria 79 113 7 4 2
class Coriobacteriia 4613 1538 785 275 55 35 32 32 31 21 15 11 7 6 4 4 3 2 1 1
class Coscinodiscophyceae 1
class Cryptophyceae 2
class Cyanophyceae 4439 933 16 96 3 10 6 24 1 6 1 7 2 2 1
class Cytophagia 4568 1321 7 271 4 11 5 24 1 6 4 3 2 1
class Dacrymycetes 3
class Deferribacteres 1444 153 1 218 5 5 8 4 2
class Deferrisomatia 45 1
class Dehalococcoidia 261 250 1 254 1 1 4 2 1 2
class Deinococci 2927 281 7 270 1 13 6 20 1 7 2 1
class Deltaproteobacteria 4585 1454 646 275 43 32 20 29 31 21 12 1 7 3 2 1 1
class Desulfarculia 262 1 64 1 3 2
class Desulfobaccia 3 28 4 1 1 2
class Desulfobacteria 1162 968 3 96 15 7 21 6 1 2 2 2 1
class Desulfobulbia 49 258 96 9 1 18 2 1
class Desulfomonilia 715 13 29 1 1 2
class Desulfovibrionia 4495 1325 646 98 58 31 20 31 29 21 12 9 7 6 4 4 3 2 1 1
class Desulfurellia 11 22 1 12 4 8 1 2
class Desulfuribacillia 9 1
class Desulfuromonadia 2521 214 1 96 16 1 18 13 1 5 2 1
class Dethiobacteria 749 12 1 2 1 5 2
class Dictyochophyceae 1
class Dictyoglomia 1 138 39 2 2
class Dinophyceae 1
class Dissulfuribacteria 14
class Dothideomycetes 206 9 2 1 1 1
class Duplopiviricetes 1
class Ellioviricetes 27
class Elusimicrobia 39 102 7 1 1 19 2 22 2 7 2
class Endomicrobiia 110 2 2
class Epsilonproteobacteria 2765 654 266 98 28 6 3 31 10 6 1 7 2 2 1 1
class Erysipelotrichia 4646 1542 784 275 35 35 31 28 31 20 14 11 7 4 3 3 2 1 1
class Euglenida 1
class Eumycetozoa 1 2 2
class Eurotiomycetes 207 10 2 1 1 1
class Eustigmatophyceae 1
class Exobasidiomycetes 33 1 1
class Faserviricetes 12 12
class Fibrobacteria 334 293 187 183 4 1 2
class Fimbriimonadia 8 73 37 3 2
class Flasuviricetes 1
class Flavobacteriia 4232 837 458 275 12 11 1 5 24 4 2 1 7 1 3 2 1
class Florideophyceae 2 1 8
class Fusobacteriia 2394 797 144 271 37 7 2 31 5 3 2 1 6 3 2 2 3 2 1
class Gammaproteobacteria 4646 1540 720 277 60 35 30 31 31 25 15 7 7 6 4 4 3 2 1 1
class Gastropoda 300 1 1
class Gemmatimonadia 17 69 1 141 3 15 1 26 1 7 2
class Glaucocystophyceae 1 1
class Gloeobacteria 21 34 1 1 1 2
class Glomeromycetes 6 1 2
class Halobacteria 18 1 208 1 2 1 2
class Herviviricetes 54 1
class Holophagae 2289 925 2 4 2
class Howeltoviricetes 1
class Hydrogenophilia 2415 259 6 15 1 14 1 2
class Ignavibacteria 51 975 2 196 4 15 4 6 1 2
class Imbricatea 1
class Insecta 537 7 11 1 1 4 22 1
class Insthoviricetes 1
class Kinetoplastea 1 1
class Kiritimatiellia 72 1 1 2
class Ktedonobacteria 440 26 178 1 1 3 3 2 1
class Lecanoromycetes 11
class Lentisphaeria 398 284 237 6 6 3 1 4 2 5 1 4 3 2 1
class Leotiomycetes 142 9 2
class Leviviricetes 2
class Limnochordia 3 175 2 1 2
class Magnoliopsida 1092 11 18 16 2 1 22 3 2
class Malasseziomycetes 99 1
class Malgrandaviricetes 154 9 22 7
class Mamiellophyceae 2
class Mammalia 232 1 1 16
class Mediophyceae 1
class Megaviricetes 14 1
class Methanobacteria 1142 330 220 200 34 15 3 22 17 4 9 1 7 6 2 2 2 1 1 1
class Methanococci 1 80 9 12 2
class Methanomicrobia 12 5 10 201 9 17 2 1
class Methylacidiphilae 35 3 1 1 2
class Microbotryomycetes 11 1
class Mixiomycetes 1
class Mollicutes 4528 1412 167 272 19 24 1 6 26 2 2 1 6 4 3 2 2 1
class Monjiviricetes 3
class Mortierellomycetes 1
class Mucoromycetes 17 1
class Myxococcia 858 693 2 97 1 1 1 5 4 1 3 2 1
class Naldaviricetes 1
class Negativicutes 4651 1543 790 275 53 33 32 32 31 25 14 7 7 6 4 4 3 2 1 1
class Nephroselmidophyceae 1
class Nitriliruptoria 2728 157 157 3 1 1 2
class Nitrososphaeria 35 9 4 1 1 1
class Nitrospinia 15 16 2
class Nitrospiria 1091 73 1 204 1 5 6 2
class Oligoflexia 56 119 1 265 1 1 4 1 1 2
class Oligohymenophorea 1 1
class Oligosphaeria 48 1
class Opitutia 2966 583 96 253 3 1 1 4 14 1 4 1 2 1
class Papovaviricetes 22
class Pedinophyceae 1
class Pelagophyceae 1
class Peptococcia 2
class Pezizomycetes 1
class Phaeophyceae 1 1
class Phycisphaerae 2 237 1 5 1 2
class Pisoniviricetes 3 1 1
class Planctomycetia 39 128 1 270 1 5 1 2 1
class Pokkesviricetes 3 1
class Pucciniomycetes 1 1
class Quintoviricetes 9 1
class Raphidophyceae 1 1
class Revtraviricetes 43
class Rhodellophyceae 2
class Rhodothermia 4324 296 88 2 6 5 6 1 1 2 1
class Rhynchonellata 2
class Rubrobacteria 35 189 228 3 4 5 2
class Saccharomycetes 248 14 12 2 6 3
class Saprospiria 191 261 201 4 2 1 2
class Schizosaccharomycetes 4 8 6
class Solibacteres 18 1
class Sordariomycetes 271 10 2 1 1 1
class Spartobacteria 54 59 2
class Sphingobacteriia 4648 752 18 272 8 25 5 30 4 1 7 4 3 2 1
class Spirochaetia 2061 265 16 272 28 25 5 1 1 1 3 2
class Stelpaviricetes 1
class Stylonematophyceae 1
class Synergistia 3718 662 237 269 3 1 1 13 20 2 1 4 7 2 3 1 1 1
class Syntrophia 735 90 70 1 5 1 1 1 2
class Syntrophobacteria 2556 509 5 88 3 1 4 14 2 2
class Syntrophorhabdia 30 1
class Synurophyceae 1
class Taphrinomycetes 1 1
class Tepidiformia 62 2
class Terriglobia 717 1034 111 266 4 4 1 2 2 2 1 1
class Terrimicrobiia 6
class Thermoanaerobaculia 96
class Thermococci 11 1 130 6 1 2
class Thermodesulfobacteria 461 79 162 2 1 2 2 1
class Thermodesulfovibrionia 1080 27 8 4 2 1 6 2
class Thermoflexia 4
class Thermoleophilia 50 171 66 3 2 1 2
class Thermolithobacteria 71
class Thermomicrobia 44 149 1 1 2
class Thermoplasmata 55 36 159 9 1 2 2
class Thermoprotei 10 44 4 1 2 1 1
class Thermotogae 155 57 256 1 5 6 2 1
class Tichowtungiia 33 2
class Tissierellia 4628 1529 514 277 28 14 9 32 29 7 7 6 7 4 2 2 2 1
class Trebouxiophyceae 1 1
class Trematoda 2
class Tremellomycetes 196 9 1 10
class Ulvophyceae 1
class Ustilaginomycetes 113 8 2
class Verrucomicrobiia 4075 1227 490 273 37 25 18 31 21 10 10 5 3 6 4 3 3 2 1 1
class Vicinamibacteria 105 1 3
class Wallemiomycetes 1
class Zetaproteobacteria 51 1 154 1 1 2
cohort Endopterygota 3 20
cohort Euteleosteomorpha 6
cohort Paraneoptera 532 2 11 2 1 22
cohort Polyneoptera 7 7 1 1 1 1
family Acanthamoebidae 1 2 1
family Acanthopleuribacteraceae 55 1
family Acaryochloridaceae 3 11 2
family Acetobacteraceae 1622 456 2 271 1 1 5 5 3 1 3 1 3 1
family Acetomicrobiaceae 52 53 1 2
family Acholeplasmataceae 4268 1099 19 264 2 14 6 8 6 2 1
family Acidaminococcaceae 4379 1439 564 274 44 21 22 31 24 19 10 6 7 4 4 3 2 1 1
family Acidiferrobacteraceae 16 191 4 2
family Acidilobaceae 1
family Acidilutibacteraceae 5 2
family Acidimicrobiaceae 732 619 13 2 1 5 3 1
family Acidithiobacillaceae 39 230 1 1 2
family Acidobacteriaceae 712 293 87 265 3 4 1 2 2 2 1 1
family Acidothermaceae 61 9 1
family Ackermannviridae 124 1
family Acrospermaceae 1
family Actinomycetaceae 3574 1372 634 275 17 23 29 15 12 3 6 4 7 4 2 2 1
family Actinopolymorphaceae 222 2 10 1
family Actinopolysporaceae 859 291 36 1 6 1
family Acutalibacteraceae 1 4
family Acytosteliaceae 1 1
family Aerococcaceae 2016 1282 80 267 4 3 5 10 1 1 7 1 2 1
family Aeromonadaceae 1185 314 7 272 1 4 1 5 1 2 2 2 1
family Afifellaceae 4 1
family Agaricaceae 1
family Ahrensiaceae 1
family Ajellomycetaceae 2 2
family Akkermansiaceae 3901 1165 488 273 37 25 18 31 9 10 10 5 2 6 4 3 3 2 1 1
family Albuginaceae 1
family Alcaligenaceae 4577 228 6 275 3 10 5 7 1 1 7 4 2 2 1
family Alcanivoracaceae 578 29 258 1 2 2 1
family Alcidae 14
family Algiphilaceae 49
family Aliceevansviridae 13 1
family Alicyclobacillaceae 7 637 259 3 6 5 4 2 1
family Alsobacteraceae 2
family Alterococcaceae 34 1
family Alteromonadaceae 1637 593 272 1 5 2 1 1 1 2 1 1
family Amaranthaceae 15 12
family Aminiphilaceae 517 6 5
family Aminobacteriaceae 351 134 98 87 1 10 2 2
family Amoebophilaceae 4330 3 52 1 1 5 1
family Amorphaceae 1 2
family Amphipleuraceae 2
family Anacardiaceae 1
family Anaerohalosphaeraceae 47 1 2
family Anaerolineaceae 777 369 8 242 1 5 1 1 2
family Anaeromyxobacteraceae 1 590 237 1 1 2 2
family Anaeroplasmataceae 601 589 128 1 8 2 8 2 2 4 1 1
family Anaerotignaceae 4
family Anaerovoracaceae 3 4 1
family Anaplasmataceae 1414 24 197 1 1 5 1 2 2 1
family Anaulaceae 1
family Ancalomicrobiaceae 1 1
family Anthocerotibacteraceae 1
family Anthribidae 2
family Aphanizomenonaceae 3229 3 82 5 11 7 2
family Aphanothecaceae 1 7 141 1 1 2 1
family Aphididae 7 22
family Apiaceae 1
family Aplosporellaceae 2
family Aquaspirillaceae 8 80 60 3 4 2 1
family Aquificaceae 36 92 86 2 3 6 2
family Archaeoglobaceae 3 2 4 2 1
family Archangiaceae 174 72 237 1 2 2 1
family Arcobacteraceae 251 20 1 94 1 5 1 1 2
family Ardenticatenaceae 27 209 3 1 1
family Arenaviridae 27
family Armatimonadaceae 2 3
family Arthrodermataceae 4
family Aspergillaceae 201 10 2 1 1 1
family Asteraceae 1 22
family Astroviridae 1
family Atopobiaceae 1645 1067 165 272 12 10 4 25 6 1 1 3 3 2 1
family Atribacteraceae 2
family Aurantimonadaceae 68 19 258 1 1 2 2 1
family Autographiviridae 107 1
family Azonexaceae 480 22 230 1 1 2
family Azospirillaceae 2410 709 1 97 1 2 5 9 3 1 2 2 2 1
family Babesiidae 1 1
family Bacillaceae 4293 1228 232 275 16 30 4 32 31 9 1 7 2 2 1
family Bacillales Family X. Incertae Sedis 4632 864 3 3 22 7 2 1
family Bacillariaceae 2
family Bacillidae 7 6 4 1 1
family Bacteriovoracaceae 24 93 1 34 1 1 2
family Bacteroidaceae 4653 1543 782 286 68 34 32 32 31 27 15 11 7 6 4 4 3 2 1 1
family Baculoviridae 1
family Baekduiaceae 64 2
family Balneatrichaceae 39
family Balneicellaceae 20
family Balneolaceae 255 825 3 2 1 1
family Bangiaceae 1
family Barnesiellaceae 1252 513 271 28 10 18 31 8 19 15 4 2 4 3 2 1 1
family Bartonellaceae 185 9 254 1 5 2 1
family Bathycoccaceae 2
family Batrachospermaceae 2
family Beijerinckiaceae 139 17 230 4 1 1 2
family Berkeleyaceae 1
family Bernardetiaceae 143 19 2 1 2
family Beutenbergiaceae 69 1 2
family Bianqueaceae 3
family Bifidobacteriaceae 4586 1520 615 282 49 25 25 32 30 20 12 10 7 6 2 3 3 2 1 1
family Bionectriaceae 2
family Blastocatellaceae 25 1
family Blastochloridaceae 16 35 1 2
family Blastocystidae 2 29 1 1 2 1
family Blattabacteriaceae 216 1 5 2
family Bogoriellaceae 36 47 128 6 2
family Boletaceae 1
family Bondarzewiaceae 1 1
family Borreliaceae 44 2 169 9 5 1
family Boseaceae 9 1 79 1 4 2
family Botryosphaeriaceae 2 1
family Bovidae 2
family Brachyspiraceae 43 13 252 1 5 1 2
family Bradymonadaceae 164 2 2
family Brassicaceae 1
family Breoghaniaceae 15 2 1
family Brevibacteriaceae 297 163 60 266 9 30 1 1 7 2 1 1
family Brevinemataceae 6 1
family Breznakiellaceae 7 59 1 1 2 1
family Brucellaceae 501 48 25 255 1 4 5 2 1 2 1
family Bruguierivoracaceae 28 34 70 3 4 2
family Bryobacteraceae 19 1 1 2
family Buccinidae 7 1
family Budviciaceae 308 172 1 4 19 2
family Burkholderiaceae 4171 506 27 275 7 17 5 25 1 3 1 7 2 3 2 1 1
family Butyricicoccaceae 4
family Caedimonadaceae 2 1 1
family Caldicellulosiruptoraceae 4380 123 95 4 1 6 26 6 2
family Caldicoprobacteraceae 51 236
family Caldilineaceae 1490 607 56 2 3 2 7 2
family Caldisericaceae 3 9 10 1 1 1
family Caldisphaeraceae 3
family Calditerrivibrionaceae 7 13 1 1 2
family Calditrichaceae 1082 13 60 1 5 7 2
family Caliciviridae 1
family Callithamniaceae 1
family Calotrichaceae 1887 120 198 1 5 4 6 2
family Campylobacteraceae 1795 562 265 274 27 6 3 31 7 6 1 7 3 2 1 1
family Candidatus Absconditicoccaceae 1
family Candidatus Actinomarinaceae 5
family Candidatus Babeliaceae 2 3
family Candidatus Brocadiaceae 39 37 1 2 1
family Candidatus Cenarchaeaceae 11
family Candidatus Chazhemtobacteraceae 1
family Candidatus Chromulinivoraceae 3 1 1
family Candidatus Cloacimonadaceae 7 2 2
family Candidatus Comchoanobacteraceae 1
family Candidatus Competibacteraceae 180 2 2
family Candidatus Desulfofervidaceae 1 1
family Candidatus Fermentimicrarchaeaceae 1
family Candidatus Gastranaerophilaceae 4
family Candidatus Izemoplasmataceae 2
family Candidatus Methanoliparaceae 1
family Candidatus Methanoperedenaceae 1 1
family Candidatus Midichloriaceae 1 1 1 2
family Candidatus Nanohalobiaceae 1
family Candidatus Nanopelagicaceae 219 1 3 2 1
family Candidatus Nanosynbacteraceae 3 1 1 2
family Candidatus Nanosyncoccacae 1
family Candidatus Paracaedibacteraceae 1 2
family Candidatus Pelagibacteraceae 7 147 1 1 1 2
family Candidatus Prometheoarchaeaceae 1 2
family Candidatus Promineifilaceae 69 1 1
family Candidatus Rhabdochlamydiaceae 420 1
family Candidatus Saccharimonadaceae 7 2
family Candidatus Scalinduaceae 39
family Candidatus Sumerlaeaceae 14
family Candidatus Uabimicrobiaceae 1 1
family Canidae 16
family Capillimicrobiaceae 1
family Cardiobacteriaceae 95 180 2 171 1 1 2
family Carnobacteriaceae 3094 920 326 268 6 5 13 6 13 1 2 1 7 2 2 2 1 1
family Caryophyllaceae 2
family Casimicrobiaceae 43 2
family Catabacteriaceae 288 101 1 1 3 1 6
family Catalimonadaceae 80
family Catenulisporaceae 1 4 24 5 2
family Caulerpaceae 1
family Caulobacteraceae 2270 244 9 272 2 5 15 3 1 1 2 1 1
family Cavenderiaceae 1 1 1
family Celerinatantimonadaceae 12 2
family Cellulomonadaceae 250 146 254 1 2 5 1 2 1
family Cellulosilyticaceae 1461 15 96 1 2 6 8 1 3
family Cellvibrionaceae 367 91 257 1 5 2 1
family Ceramiaceae 1
family Cerasicoccaceae 1233 267 1 10 1 2 1
family Cesiribacteraceae 65
family Chaetocerotaceae 1
family Chaetomiaceae 74 9 1
family Chamaesiphonaceae 5 3
family Chaseviridae 50
family Chattonellaceae 1 1
family Chelatococcaceae 16 9 95 2
family Chenopodiaceae 1
family Chitinibacteraceae 4 54 39 4 2 1
family Chitinispirillaceae 19 1
family Chitinivibrionaceae 2
family Chitinophagaceae 2414 1237 5 270 1 5 5 13 1 1 6 3 1 1
family Chlamydiaceae 1 3 101 1 1 2 1 1
family Chlamydomonadaceae 2 2
family Chlorellaceae 1
family Chlorobiaceae 3912 120 268 5 5 23 2 2
family Chloroflexaceae 22 2 43 2 2
family Chlorogloeopsidaceae 31
family Chloroherpetonaceae 23 30 7 1 2
family Chloropicaceae 2
family Chlorosarcinaceae 1
family Christensenellaceae 436 181 273 12 23 24 6 9 2 12 4 7 4 4 3 2 1 1
family Chromatiaceae 3868 785 2 267 3 1 4 16 6 2 2
family Chromobacteriaceae 674 145 269 9 11 1 2 2 1
family Chroococcaceae 2034 2 41 1 2 2
family Chroococcidiopsidaceae 7 55 1 2 1
family Chrysiogenaceae 900 25 95 1 1 2 1
family Chrysochromulinaceae 1
family Chthoniobacteraceae 54 10
family Chthonomonadaceae 7 168 13 3
family Cicadellidae 1
family Clavicipitaceae 61 8 1
family Clostridiaceae 4652 1543 787 275 66 35 32 32 31 24 14 11 7 6 4 4 3 2 1 1
family Clostridiales Family XI. Incertae Sedis 3 218
family Clostridiales Family XVI. Incertae Sedis 2743 134 200 4 1 2 2 2
family Clostridiales Family XVII. Incertae Sedis 127 195 257 1 1 6 5 2 2
family Coccidae 446 1 1
family Coelosphaeriaceae 134 1
family Cohaesibacteraceae 1 169 1
family Coleofasciculaceae 17 14 63 2 1
family Collodictyonidae 1
family Colwelliaceae 5 219 228 1 5 2 2 1 1
family Comamonadaceae 4175 264 112 275 7 3 5 12 8 6 2 2 2 1
family Compsopogonaceae 1
family Conexibacteraceae 13 8 57 3 2
family Coniophoraceae 1 1 1
family Coprobacillaceae 4609 1271 394 97 24 5 27 6 29 8 11 7 4 4 3 2 1 1
family Coprothermobacteraceae 79 113 7 4 2
family Coraliomargaritaceae 1410 123 11 1 1
family Cordycipitaceae 15 1
family Coriobacteriaceae 4613 1350 781 275 41 33 23 32 21 15 5 7 6 4 4 3 2 1
family Corynebacteriaceae 1932 891 443 276 30 7 13 31 19 8 6 1 1 2 1 2 2 1
family Coxiellaceae 119 50 2 159 1 1 1 2
family Crenotrichaceae 4
family Criblamydiaceae 43
family Crocinitomicaceae 5 34 199 1 2 1 2 1
family Cryomorphaceae 5 142 1 3 1 1
family Cryphonectriaceae 1
family Cryptobasidiaceae 1 1
family Cryptococcaceae 66 8 10
family Cryptosporangiaceae 5 2
family Cryptosporidiidae 9 4
family Cucurbitariaceae 1
family Cyanidiaceae 1
family Cyanobacteriaceae 736 62 1
family Cyanophoraceae 1 1
family Cyanothecaceae 2 5 1
family Cyclobacteriaceae 384 264 1 5 1 2 2 1
family Cyclonatronaceae 21 3 2
family Cyphellophoraceae 1
family Cyphellopsidaceae 6
family Cytophagaceae 4387 1083 3 270 1 3 5 3 6 4 2 2 1
family Dacrymycetaceae 3
family Dacryobolaceae 1 1
family Dasyaceae 1
family Debaryomycetaceae 199 9 12
family Deferribacteraceae 1447 153 1 243 5 4 8 4 2
family Deferrisomataceae 45 1
family Defluviitaleaceae 480 18 9 3 8 4 1 1
family Dehalococcoidaceae 261 67 240 1 1 1 2
family Deinococcaceae 2271 172 6 270 1 1 6 12 4 2 1
family Demequinaceae 40 77 1 2
family Demerecviridae 207
family Dermabacteraceae 730 126 55 271 1 6 5 2 2
family Dermacoccaceae 23 36 2 198 1 1 1 1 2 1
family Dermatophilaceae 2 10 143 1 1 1 2
family Dermocarpellaceae 5 9 1 1
family Desulfallaceae 2116 357 68 3 1 7 2
family Desulfarculaceae 262 180 1 3 2
family Desulfatibacillaceae 4 57 5 10 2 1
family Desulfatiglandaceae 32
family Desulfatirhabdiaceae 2
family Desulfitibacteraceae 16 130 1 2 1
family Desulfitobacteriaceae 2335 618 1 96 21 2 28 12 1 7 3 1
family Desulfobaccaceae 3 28 6 1 1 2
family Desulfobacteraceae 1121 870 2 268 15 2 13 6 2 2 2
family Desulfobacteriaceae 5 363 63 1 1 2
family Desulfobulbaceae 49 258 266 9 1 14 2 1
family Desulfocapsaceae 23 15 82 9 7 2
family Desulfococcaceae 20 55 76 9 12 2 1
family Desulfofabaceae 24 65 1
family Desulfohalobiaceae 986 79 34 3 1 7 1 1
family Desulfolunaceae 2
family Desulfomicrobiaceae 282 310 242 9 21 6 2 1
family Desulfomonilaceae 715 13 31 1 1 2
family Desulfonatronaceae 1272 60 2
family Desulfonatronovibrionaceae 696 12 1 2
family Desulfonauticaceae 381 27 7
family Desulfoplanaceae 25
family Desulforegulaceae 79 2
family Desulfosalsimonadaceae 8
family Desulfosarcinaceae 292 32 92 1 1 2
family Desulfosudaceae 56 9 8 2
family Desulfothermaceae 15
family Desulfotomaculaceae 3030 1308 2 96 24 9 6 15 11 7 3 2 1
family Desulfovibrionaceae 4443 1314 646 272 58 31 20 31 29 21 12 9 7 6 4 4 3 2 1 1
family Desulfurellaceae 12 22 25 4 7 1 2
family Desulfuribacillaceae 9 1
family Desulfurisporaceae 2630 879 2 2 2
family Desulfurobacteriaceae 30 47 1 2 1
family Desulfurococcaceae 5 2
family Desulfuromonadaceae 2323 116 261 12 17 9 5 2 1
family Dethiobacteraceae 750 12 1 2 1 5 2
family Dethiosulfovibrionaceae 3003 412 45 4 1 1 16 6 3 1 1
family Devosiaceae 1860 89 76 5 5 1 2
family Diapheromeridae 1
family Diaporthaceae 1
family Diaspididae 3
family Dictyoglomaceae 138 39 2 2
family Dictyosteliaceae 1 2 2
family Didymellaceae 4 1
family Didymosphaeriaceae 1
family Dientamoebidae 1 2
family Dietziaceae 144 205 2 189 1 1 8 2 1
family Diphyllobothriidae 2
family Dipodascaceae 5 9 10
family Dissoconiaceae 1
family Dissulfuribacteraceae 14
family Dissulfurispiraceae 1 2
family Dixoniellaceae 1
family Dothioraceae 2
family Drexlerviridae 8
family Dunaliellaceae 2
family Dysgonomonadaceae 3975 1023 46 268 12 4 5 4 1 2 7 3 1 1
family Ectocarpaceae 1
family Ectothiorhodospiraceae 3375 334 1 265 3 5 5 2 2 1
family Edwardsiidae 35 16 1
family Eggerthellaceae 4556 1508 773 274 49 34 32 32 31 21 11 11 7 6 4 4 3 2 1 1
family Egibacteraceae 10 1 1
family Egicoccaceae 17 1 1
family Eimeriidae 2 1
family Elioraeaceae 3 2
family Elusimicrobiaceae 39 83 7 1 1 2 2 2
family Emcibacteraceae 249 113 1 3 2
family Endomicrobiaceae 110 2 2
family Endozoicomonadaceae 4 48 2 2
family Entamoebidae 3 1 1
family Enterobacteriaceae 4458 1012 595 277 58 31 26 31 31 22 14 7 7 6 3 3 2 1 1
family Enterococcaceae 4250 551 141 275 37 27 25 32 22 4 8 2 4 3 2 3 3 2 1 1
family Entomoplasmataceae 2119 130 199 1 6 2 2 2
family Eriococcidae 1 11
family Erwiniaceae 1142 434 177 274 3 4 5 1 9 2 1 2
family Erysipelotrichaceae 4646 1542 784 275 35 35 31 26 30 20 14 11 7 4 4 3 2 1 1
family Erysiphaceae 3
family Erythrobacteraceae 324 53 2 268 1 5 1 1 2 1
family Erythrotrichiaceae 1
family Eubacteriaceae 4640 1543 300 273 35 35 32 31 31 23 11 2 7 6 2 3 3 1 1
family Eubacteriales Family XII. Incertae Sedis 1395 897 18 6 5 6 3
family Eubacteriales Family XIII. Incertae Sedis 3880 1459 656 271 15 30 18 8 28 3 10 4 7 3 3 1 1 1
family Euglenaceae 1
family Euzebyaceae 2726 150 64 1 1 1 2
family Fabaceae 1081 11 3 2 1 1 3
family Fastidiosibacteraceae 21
family Faucheaceae 8
family Feifaniaceae 3
family Ferrimonadaceae 51 51 121 2 2
family Ferrovaceae 3 1
family Fervidicoccaceae 1
family Fervidobacteriaceae 59 2 166 1 5 1 2 1
family Fibrobacteraceae 334 277 140 183 2 1 2
family Fibroporiaceae 1
family Fiersviridae 4
family Filifactoraceae 1
family Filobasidiaceae 1
family Fimbriimonadaceae 8 73 37 3 2
family Flammeovirgaceae 1252 465 1 245 3 4 4 2 2
family Flaviviridae 1
family Flavobacteriaceae 4232 741 455 275 6 2 1 5 24 2 1 7 3 2 1
family Flexibacteraceae 7 1 2 14
family Flexistipitaceae 1 98 6 1 1
family Fluviibacteraceae 2
family Fortieaceae 18
family Francisellaceae 205 96 2 257 4 5 1 2 1
family Frankiaceae 7 12 235 1 5 2 1
family Fulvivirgaceae 12 190 152 2 5 3
family Fusobacteriaceae 2223 662 121 271 36 7 2 31 3 3 2 1 6 3 2 2 3 2 1
family Gaiellaceae 59 2
family Galaxauraceae 1
family Galdieriaceae 3 1
family Gallionellaceae 745 30 247 2 1 1 2 1
family Geitlerinemataceae 23 2 1
family Gemellaceae 4358 901 176 97 7 3 17 6 9 2 6 3 2 1
family Geminicoccaceae 183 25 2 5 1
family Geminigeraceae 2
family Geminocystaceae 730 62 59 3 1 2 1
family Gemmataceae 16 15 1 227 1 1 2
family Gemmatimonadaceae 17 53 1 231 3 1 2
family Geoalkalibacteraceae 9 65 2 1
family Geobacteraceae 256 84 269 5 5 4 1 2
family Geodermatophilaceae 52 137 1 118 4 2 1
family Geopsychrobacteraceae 2233 10 1 9 5 1
family Geothermobacteraceae 2
family Geovibrionaceae 14 3 27 4 2
family Gigartinaceae 1
family Gloeobacteraceae 21 184 1 1 1 2
family Gloeomargaritaceae 1
family Gloeophyllaceae 1
family Gloeotrichiaceae 4
family Glomeraceae 2 1 2
family Glomerellaceae 54 1
family Glycomycetaceae 184 183 48 1 1 1 2
family Gomontiellaceae 120 1 3 2
family Gomphosphaeriaceae 136 1
family Gordoniaceae 110 179 1 255 1 5 2 1
family Gottschalkiaceae 209 202 12 23 1 2 2 1
family Gracilibacteraceae 725 9 3 2 5
family Granulosicoccaceae 92 115 1 2
family Gregarinidae 1
family Guelinviridae 63
family Haematococcaceae 1
family Haemonchidae 2
family Hafniaceae 388 71 14 261 14 2 10 3
family Hahellaceae 575 282 100 2 3 1 2
family Haladaptataceae 2
family Halanaerobiaceae 854 340 1 259 3 5 9 2 2 3
family Halarsenatibacteraceae 100
family Halieaceae 90 229 1 1 2
family Halimedaceae 1
family Haliscomenobacteraceae 1 140 77 3 2
family Haloarculaceae 11 1 165 2 2
family Halobacteriaceae 18 1 122 1 1 1
family Halobacteriovoraceae 23 39 108 1 4 2
family Halobacteroidaceae 102 553 191 3 3 1 4 2
family Haloferacaceae 4 161 1 1 2
family Halomonadaceae 1789 619 269 4 2 1 5 9 1 3 2 1 1
family Haloplasmataceae 30 1 1
family Halorubraceae 3 1
family Halosphaeriaceae 1
family Halothecacae 1
family Halothermotrichaceae 235 9 2 2 6 2 2
family Halothiobacillaceae 71 159 75 2 1
family Hapalidiaceae 1
family Hapalosiphonaceae 16 1 1
family Helicobacteraceae 1701 67 3 259 24 30 4 1 2 1
family Heliobacteriaceae 2240 331 254 2 3 1 10 6 5 2
family Herelleviridae 46 4
family Herpesviridae 51 1
family Herpetosiphonaceae 6 15 1
family Herpotrichiellaceae 173 1 1 1
family Hesperiidae 20
family Heteroderidae 1
family Heteroleibleiniaceae 18
family Hexamitidae 7 4
family Hippeaceae 13 2 2
family Histionidae 1
family Holophagaceae 2289 886 2 3
family Holosporaceae 19 1 3 1
family Hominidae 220 1 1
family Hoplolaimidae 1
family Hoyosellaceae 43 12
family Hujiaoplasmataceae 41
family Hungateiclostridiaceae 578 696 142 1 34 7 4 3 6 6
family Hyaloscyphaceae 1
family Hydrogenimonadaceae 2 2
family Hydrogenophilaceae 2421 258 5 15 1 14 1 2
family Hydrogenothermaceae 42 101 1 2
family Hyellaceae 1 1 2
family Hymenobacteraceae 3463 233 2 270 1 5 9 1 1 2 1
family Hymenochaetaceae 1
family Hymenolepididae 1
family Hyphomicrobiaceae 2472 178 261 1 4 9 1 5 2
family Hyphomonadaceae 308 857 1 237 1 4 2 3 2 1
family Hypocreaceae 62 2
family Iamiaceae 1 34 80 2
family Ichthyobacteriaceae 1 1
family Idiomarinaceae 159 51 164 1 1 2 2
family Ignatzschineriaceae 6 11 2
family Ignavibacteriaceae 51 47 1 60 1 1 2
family Ilumatobacteraceae 200 35 2
family Immundisolibacteraceae 33 4 2
family Inoviridae 12 12
family Intestinicryptomonaceae 1
family Intestiviridae 9 8 4 1
family Intrasporangiaceae 147 90 264 3 4 2 1
family Isonidae 1
family Isosphaeraceae 15 5 1 218 4 2 1
family Jatrophihabitantaceae 12 8 1 2
family Jiangellaceae 56 21 93 4 1
family Jonesiaceae 100 124 17 2
family Juglandaceae 1
family Kaistiaceae 27 62 1
family Kallotenuaceae 31
family Kangiellaceae 43 88 1 2
family Kareniaceae 1
family Ketobacteraceae 15 2 1
family Kiloniellaceae 1155 562 5 1 2 1
family Kineosporiaceae 66 119 19 1 2
family Kiritimatiellaceae 58 1 2
family Kofleriaceae 428 44 89 3 3 1
family Koleobacteraceae 2
family Kordiimonadaceae 251 2
family Kosmotogaceae 37 3 103 1 1 2
family Kribbellaceae 289 428 11 1 2 5 2
family Ktedonobacteraceae 1 1
family Ktedonosporobacteraceae 35 1 2
family Kytococcaceae 1 1 2 22 1 1
family Labilitrichaceae 49 63 2
family Lachnospiraceae 4653 1543 789 288 70 35 32 32 31 27 15 11 7 6 4 4 3 2 1 1
family Lacipirellulaceae 17 100 1 2 1
family Lactobacillaceae 4527 1531 771 277 41 27 26 32 29 8 8 10 7 6 4 4 3 2 1
family Lamiaceae 14
family Laminariaceae 1
family Laqueidae 2
family Lawsonellaceae 88 1 2 3 2
family Legionellaceae 3160 94 1 262 1 5 16 3 2 2 1
family Lentisphaeraceae 6 2
family Leptolyngbyaceae 1184 5 1 124 1 4 2 2
family Leptosphaeriaceae 16 1
family Leptospiraceae 1285 82 236 4 5 1 2
family Leptotrichiaceae 417 272 38 271 2 5 3 1 2 1 1
family Leuconostocaceae 3748 1429 103 1 9 3 4 5 9 1 6
family Leucosporidiaceae 1
family Lewinellaceae 189 11 2
family Lichenihabitantaceae 13 1 1
family Lichtheimiaceae 1
family Limisphaeraceae 32 2
family Limnochordaceae 3 175 2 2
family Linyphiidae 4
family Listeriaceae 2862 365 1 272 9 1 11 2 3 1 1 2 1 1
family Litorivicinaceae 300 67 3 1 3
family Luteibaculaceae 2
family Lycaenidae 3
family Lycoperdaceae 5
family Lysobacteraceae 3825 418 19 275 4 5 15 1 6 1 6 2 1
family Magnaporthaceae 1
family Magnetococcaceae 25 194 1 1 2
family Malasseziaceae 99 1
family Maliibacteriaceae 96 6 3
family Mallomonadaceae 1
family Malvaceae 1
family Mamiellaceae 1
family Mangrovivirgaceae 2
family Maricaulaceae 36 41 13 1 1 2
family Marinifilaceae 375 200 1 4 1 4 3
family Marinilabiliaceae 792 1 188 6 2 7 4 2 2
family Marinobacteraceae 220 208 96 1 5 1 2 1 1
family Mariprofundaceae 51 1 148 1 1 2
family Marivirgaceae 3 5 2 1 2 1
family Mastigamoebidae 1
family Melioribacteraceae 966 38 2 15 4 6 1
family Merismopediaceae 28 2
family Mesoaciditogaceae 6 2
family Metamycoplasmataceae 3605 734 4 26 1 6 2 2 2 1
family Methanobacteriaceae 1142 325 220 200 34 2 3 22 7 4 9 1 1 6 2 2 2 1 1 1
family Methanocaldococcaceae 1 4 8 5 2
family Methanocellaceae 34 2
family Methanococcaceae 1 44 9 12 2
family Methanocorpusculaceae 5 1 1 5 4 3 2
family Methanomassiliicoccaceae 55 31 76 9 1 2 2
family Methanomethylophilaceae 23 4 2
family Methanomicrobiaceae 72 2 2 1
family Methanoregulaceae 2 14 1 2
family Methanosarcinaceae 7 1 190 9 17 2
family Methanospirillaceae 1 4 3 2
family Methanothermaceae 1
family Methanotrichaceae 1 11 1 2
family Methylacidiphilaceae 35 3 1 1 2
family Methylobacteriaceae 268 89 4 267 1 5 2 1
family Methylococcaceae 16 258 1 266 3 5 1 2 1
family Methylocystaceae 49 33 247 1 4 2 1
family Methylophilaceae 2117 327 249 1 1 2 2 2 1
family Methylothermaceae 61 1 1 1
family Metschnikowiaceae 6 4 1
family Microascaceae 1
family Microbacteriaceae 1391 877 49 274 2 6 6 2 1 5 2 1 1
family Microbulbiferaceae 14 1 259 1 4 2 1
family Micrococcaceae 1554 770 150 275 14 25 22 25 2 3 1 2 6 2 2 1
family Microcoleaceae 1053 462 1 167 1 5 2 1 2
family Microcystaceae 23 28 2 1 2 1
family Micromonosporaceae 1404 399 1 268 1 6 5 1 1 6 2 1
family Micropepsaceae 16
family Microscillaceae 219 1
family Microvenatoraceae 4 1
family Microviridae 154 9 22 7
family Miltoncostaeaceae 1 2
family Minwuiaceae 1
family Mitoviridae 1
family Mixiaceae 1
family Mollisiaceae 1
family Monodopsidaceae 1
family Monoglobaceae 3
family Monomastigaceae 1
family Mooreiaceae 10
family Moorellaceae 3705 70 92 2 5 19 1 2
family Moraxellaceae 2557 695 21 272 22 7 4 31 19 14 5 1 6 2 2 1 1
family Morchellaceae 1
family Morganellaceae 738 597 17 270 26 16 1 26 10 1 7 3 7 2 1
family Moritellaceae 3 1 49 1 2
family Mortierellaceae 1
family Motilibacteraceae 10
family Mrakiaceae 1
family Mucispirillaceae 6 5 4 2
family Muribaculaceae 273 3 6 1 3 3 3 3
family Mychonastaceae 1
family Mycobacteriaceae 653 104 59 272 1 2 6 3 1 1 1 2 1
family Mycoplasmataceae 4003 1137 11 271 10 6 6 18 2 5 2 1
family Mycoplasmoidaceae 122 217 10 31 8 3 2 2
family Mycosphaerellaceae 8 1
family Myoviridae 2 7 1
family Mytilinidiaceae 1
family Myxococcaceae 4 6 254 1 5 1 2
family Mzabimycetaceae 205
family Nakamurellaceae 2 157 4 2
family Nannocystaceae 265 27 1
family Nanopusillaceae 1
family Natranaerobiaceae 63 50 1 2
family Natranaerofabaceae 1 2
family Natrialbaceae 3 180 1 1 2
family Natronoarchaeaceae 1 1
family Nautiliaceae 7 54 179 1 2 2
family Nectriaceae 71 8 1 1
family Neisseriaceae 1519 223 68 273 2 10 5 5 16 4 3 1 7 4 1 2 2 1 1
family Neomegalonemataceae 27 1
family Nephroselmidaceae 1
family Nevskiaceae 3555 174 2 198 1 2 13 2
family Nitratiruptoraceae 2 1 2
family Nitriliruptoraceae 13 7 2
family Nitrobacteraceae 188 90 11 272 1 5 1 1 1 1 2 1
family Nitrosomonadaceae 64 406 8 239 3 3 4 3 2 2
family Nitrosopumilaceae 8 8 11 1 1 1
family Nitrososphaeraceae 27 1
family Nitrospinaceae 16 16 2
family Nitrospiraceae 1091 73 1 250 1 5 5 2
family Nocardiaceae 488 38 21 269 1 6 1 1 2 1 1
family Nocardioidaceae 586 552 1 271 2 5 1 6 2 1
family Nocardiopsaceae 5 479 237 1 4 2 2 2 1
family Nodosilineaceae 2 9 3 2
family Noelaerhabdaceae 1
family Nostocaceae 4059 5 252 1 2 6 17 1 7 2 1
family Nyctaginaceae 2
family Oceanospirillaceae 1164 456 262 1 5 1 2
family Oculatellaceae 16 11 1 2
family Odoribacteraceae 4375 1368 621 275 46 32 24 32 28 23 13 10 7 6 4 3 3 2 1 1
family Oedogoniaceae 1
family Oleaceae 1
family Oleiphilaceae 3 3 1 2
family Oligoflexaceae 1
family Oligosphaeraceae 48
family Onchocercidae 1
family Onygenaceae 1 1
family Ophiocordycipitaceae 2 1 1
family Ophiostomataceae 30 1
family Opitutaceae 32 55 250 1 1 4 1 2
family Orbaceae 13 140 1 5 2
family Ornithinimicrobiaceae 79 21 72 1 4 2
family Orobanchaceae 12
family Orthoherpesviridae 7 1
family Orthomyxoviridae 1
family Oscillatoriaceae 2292 160 72 4 2 2
family Oscillochloridaceae 4 1
family Oscillospiraceae 4653 1543 786 288 61 35 32 32 31 26 15 11 7 6 4 4 3 2 1 1
family Ostreobiaceae 1
family Oxalobacteraceae 2832 627 259 274 17 24 2 25 15 7 1 7 6 4 2 2 2 1
family Paenibacillaceae 3815 1346 1 274 4 28 6 19 5 1 7 2 1 1
family Palmariaceae 1
family Paludibacteraceae 8 155 1 238 2 3 5 1 1 1 3
family Papillomaviridae 18
family Parachlamydiaceae 7 6 44 1 2
family Paracoccaceae 862 360 4 273 1 4 1 5 2 1 1 7 2 2 1
family Parameciidae 1
family Parodontellaceae 1
family Parvibaculaceae 3 17 18 4 2
family Parvicellaceae 2
family Parvoviridae 9 1
family Parvularculaceae 26 1 2 1
family Pasteurellaceae 3805 1155 548 275 19 28 18 9 21 10 14 1 7 2 2 3 2 1
family Pasteuriaceae 217
family Patulibacteraceae 5 7 1
family Paulinellidae 1
family Pavlovaceae 1
family Pectobacteriaceae 252 511 2 270 1 1 5 3 2 1
family Peduoviridae 1
family Pelagicoccaceae 1615 101 1 5 4
family Peptococcaceae 4610 1468 519 272 35 23 6 28 22 8 7 4 2 3 2 1
family Peptoniphilaceae 4532 1455 507 277 27 6 7 30 26 7 7 6 7 2 2 2 1 1
family Peptostreptococcaceae 4093 1538 788 275 59 29 30 27 22 12 12 11 7 6 2 4 3 2 1 1
family Perlucidibacaceae 3
family Peronosporaceae 1
family Persicobacteraceae 8 116 1 4 1 2 2
family Petrotogaceae 72 36 158 1 5 6 2
family Peyssonneliaceae 1
family Pezizaceae 1
family Phaeodactylaceae 1
family Phaeosphaeriaceae 1
family Phaffomycetaceae 8 4 1
family phages with long non-contractile tails 2 10 1
family Phakopsoraceae 1
family Phanerochaetaceae 1 1
family Phocidae 11
family Phototrophicaceae 2
family Phreatobacteraceae 1 59 1 2
family Phycidae 6
family Phycisphaeraceae 2 107 2 2
family Phycodnaviridae 1 1
family Phycomycetaceae 1
family Phyllobacteriaceae 94 53 35 268 5 6 3 1 1 2 1 1
family Physalacriaceae 7
family Pichiaceae 6 8 5
family Picobirnaviridae 1
family Picornaviridae 3 1
family Pirellulaceae 7 50 145 1 2 1
family Piscirickettsiaceae 696 489 2 260 3 5 1 2 1
family Pisolithaceae 1
family Planctomycetaceae 18 120 260 1 1 2 1
family Planococcaceae 2501 1340 39 270 10 21 16 31 5 1 7 2 1 1
family Plasmodiidae 5 2 1
family Plectosphaerellaceae 8 2
family Pleioneaceae 2
family Pleomorphomonadaceae 8 10 29 2 1
family Pleosporaceae 55 2 1
family Pleurastraceae 1
family Pleuroascaceae 1
family Poaceae 1
family Podosporaceae 63
family Podoviridae 7 1
family Polyangiaceae 204 11 1 236 1 4 1 2
family Polyomaviridae 5
family Polyporaceae 29 1
family Pomatiopsidae 2
family Porphyromonadaceae 4632 1524 523 272 21 34 26 24 26 5 9 7 4 3 3 2 1
family Porticoccaceae 5
family Postiaceae 1
family Poxviridae 3 1
family Prevotellaceae 4598 1522 567 277 53 20 13 32 31 3 14 9 7 6 4 3 3 2 1 1
family Prochloraceae 2 2 231 1 4
family Prochlorococcaceae 1
family Prochlorococcaceae 6 8 1 88 1 4 1 2
family Prochlorotrichaceae 9 28 3 2
family Prolixibacteraceae 226 260 1 2 3 1 3
family Promicromonosporaceae 10 87 231 5 1 4 1 2 1
family Propionibacteriaceae 136 751 118 275 9 13 9 25 2 2 4 1 2 1
family Proteidae 5 8 1 2
family Proteinivoraceae 3677 677 5 8 7 2
family Proteromonadidae 1
family Psathyrellaceae 1
family Pseudanabaenaceae 1494 9 30 4 2 2 2
family Pseudeurotiaceae 2 1
family Pseudoalteromonadaceae 93 66 266 1 5 1 2 1
family Pseudobdellovibrionaceae 52 8 235 1 3 1 1 2
family Pseudococcidae 105 2 27 1
family Pseudohongiellaceae 13 1 2 1
family Pseudomonadaceae 1114 583 51 275 27 8 2 31 7 9 4 5 3 1 1
family Pseudonocardiaceae 1227 490 271 3 5 4 1 4 3 1
family Pseudoxanthobacteraceae 5
family Psychromonadaceae 46 55 24 4 2 1
family Pucciniaceae 1 1
family Pumilibacteraceae 3
family Punctulariaceae 3 1
family Puniceicoccaceae 2954 560 7 35 1 1 14 4 1
family Pycnococcaceae 1
family Pyrenomonadaceae 1
family Pyriculariaceae 9 8
family Pyrinomonadaceae 44
family Rarobacteraceae 65
family Reichenbachiellaceae 1 63
family Retroviridae 43
family Reyranellaceae 5 1
family Rhabditidae 1
family Rhizobiaceae 1219 111 8 275 9 13 14 5 1 1 7 2 1
family Rhizopodaceae 2 1
family Rhodanobacteraceae 3159 273 261 1 5 5 3 2 1
family Rhodellaceae 1
family Rhodobiaceae 10 24 3 209 4
family Rhodocyclaceae 2952 484 70 254 1 2 1 1 1 2 2 2 1
family Rhodomelaceae 1
family Rhodospirillaceae 3977 1080 371 275 3 24 5 25 21 7 2 1 1
family Rhodothalassiaceae 70 18
family Rhodothermaceae 4324 270 248 2 6 5 6 1 2 1
family Rhodovibrionaceae 947 511 1 7
family Rickettsiaceae 2801 285 220 1 4 11 6 2
family Rikenellaceae 168 1488 733 280 62 34 31 32 9 25 15 8 7 6 4 4 3 2 1 1
family Rivulariaceae 2057 121 4 4 6 2
family Robiginitomaculaceae 67
family Rosaceae 1
family Roseiarcaceae 5
family Roseiflexaceae 2 23 169 1 2
family Roseivirgaceae 1 66 38
family Roseobacteraceae 255 95 1 93 1 5 1 2 2 2 1
family Rountreeviridae 3
family Ruaniaceae 94 1 2
family Rubricoccaceae 11
family Rubritaleaceae 1633 211 8 6 1
family Rubrobacteraceae 35 138 214 3 4 5 2
family Ruminococcaceae 4653 1543 786 6 35 26 4 31 27 15 1 7 1 1
family Saccharomycetaceae 184 14 8 1 5 3
family Saccharomycodaceae 4
family Saccharomycopsidaceae 1
family Saccharospirillaceae 130 552 116 1 1 2
family Saccotheciaceae 7
family Salinibacteraceae 22 34 1 1 2
family Salinisphaeraceae 31 20 1 2
family Salinivirgaceae 98 1 2
family Salisaetaceae 946 248 1 1
family Salmonidae 1
family Salpingoecidae 2
family Sandaracinaceae 16 57 1 2
family Sanguibacteraceae 9 3 87 1 1 2
family Saprospiraceae 191 114 90 1 1 1
family Sarcocystidae 5 1
family Schistosomatidae 2
family Schizophyllaceae 1
family Schizosaccharomycetaceae 3 8 6
family Schleiferiaceae 29 37 1 2
family Sclerotiniaceae 30 9 1
family Scolopacidae 13
family Scytonemataceae 24 20 4
family Sedimenticolaceae 14 1 2
family Sedimentisphaeraceae 170 1 4 2
family Segniliparaceae 41 16 2 1 1
family Selenastraceae 1
family Selenomonadaceae 4611 877 99 275 26 12 3 31 25 1 1 7 4 3 2 1
family Shewanellaceae 2999 185 272 26 29 15 5 2 1
family Silvanigrellaceae 3
family Simkaniaceae 15 1 1 1
family Sirenicapillariaceae 2 3 1
family Smacoviridae 3
family Smithellaceae 22 13
family Sneathiellaceae 11 1
family Solanaceae 11 1
family Solemoviridae 1
family Solibacteraceae 7 1 2 1
family Solirubrobacteraceae 34 28
family Sordariaceae 10 8 2
family Soricidae 2
family Sparassidaceae 1
family Sphaerobacteraceae 35 95 2
family Sphaerochaetaceae 8 3 86 1 1 1 2
family Sphaerotilaceae 933 57 2 63 2 4 3 2 2 2 1
family Sphingobacteriaceae 4640 752 4 272 6 23 5 30 4 1 7 4 3 2 1
family Sphingomonadaceae 1658 770 17 275 2 14 5 14 1 1 6 2 1
family Sphingosinicellaceae 20 24 5 1 1
family Spirillaceae 5 14
family Spirochaetaceae 1109 184 272 1 5 1 2 2
family Spiroplasmataceae 627 262 1 6 3 2
family Spirosomataceae 3919 911 84 3 2 5 8 1 6 2
family Spirulinaceae 10
family Spongiibacteraceae 1 257 32 1 1 2
family Sporanaerobacteraceae 3 388 3 1 4 5 1
family Sporichthyaceae 22 15 59 1
family Sporidiobolaceae 11 1
family Sporolactobacillaceae 1549 232 219 2 1 1 2 1 1
family Sporomusaceae 3295 1123 34 266 3 5 4 7 2 1 1
family Sporormiaceae 1
family Staphylinidae 3 8
family Staphylococcaceae 3453 461 207 275 31 3 3 32 16 7 4 2 5 3 1 1
family Stappiaceae 5 87 1 5 1 2 1
family Steigviridae 1
family Stellaceae 293 63 2 2
family Stemonuraceae 10
family Stereaceae 2 1
family Steroidobacteraceae 40 46 67 2
family Sterolibacteriaceae 792 75 11 258 1 5 2 2 2 2
family Straboviridae 1 1 1
family Streptococcaceae 4620 1540 774 280 51 35 31 32 31 23 14 9 7 6 4 4 3 2 1 1
family Streptomycetaceae 816 369 275 10 2 32 2 1 6 2 1 1
family Streptosporangiaceae 1992 233 246 1 2 10 1 2 2 1
family Strongyloididae 2
family Stylonemataceae 1
family Succinivibrionaceae 1430 328 15 230 9 19 3 2 1 2 1
family Suillaceae 1 1
family Sulfolobaceae 4 1 2
family Sulfuricellaceae 4 239 2 2
family Sulfurimonadaceae 17 11 187 1 4 2
family Sulfurospirillaceae 45 4 68 5 5 2
family Sulfurovaceae 6 191 1 1 2
family Suoliviridae 8 3
family Sutterellaceae 4576 1461 712 265 33 35 28 4 31 22 15 6 7 6 4 3 2 2 1 1
family Symbiobacteriaceae 3061 446 222 3 4 4 2
family Synchytriaceae 9 1
family Synechococcaceae 1498 14 1 268 1 6 2
family Synergistaceae 3690 662 237 269 3 1 1 11 20 2 1 3 7 2 3 1 1
family Syntrophaceae 736 90 197 1 5 1 1 2
family Syntrophobacteraceae 1666 441 196 2 1 13 2 2
family Syntrophomonadaceae 3870 765 11 208 3 4 2 5 2
family Syntrophorhabdaceae 30 1
family Syntrophotaleaceae 59 4 56 2 2
family Tannerellaceae 4618 1491 718 281 55 33 32 32 26 21 15 11 7 6 4 4 3 2 1 1
family Taphrinaceae 1
family Temperatibacteraceae 1
family Tenuifilaceae 118 2
family Tepidamorphaceae 4
family Tepidanaerobacteraceae 1705 23 228 1 2 2 2
family Tepidiformaceae 62 2
family Tepidimicrobiaceae 98 507 43 3 3 2 1
family Tepidisphaeraceae 1
family Terasakiellaceae 9 18 1 2
family Terrimicrobiaceae 6
family Tettigoniidae 1
family Thalassobaculaceae 248 3 5 2
family Thalassospiraceae 1153 52 359 65 1 10 2 1
family Theaceae 11
family Theileriidae 4
family Thermaceae 1484 103 1 262 1 5 1 5 2 1
family Thermincolaceae 88 1 60 1 4 3 2
family Thermoactinomycetaceae 3042 886 1 262 4 5 4 6 2 1 1
family Thermoanaerobacteraceae 4152 504 211 268 23 28 23 4 2 2
family Thermoanaerobacterales Family III. Incertae Sedis 4539 246 266 23 1 25 26 7 2
family Thermoanaerobacterales Family IV. Incertae Sedis 35 142 1 2
family Thermoanaerobaculaceae 96
family Thermoascaceae 2 1
family Thermococcaceae 11 1 130 6 1 2
family Thermodesulfatatoraceae 455 2 1 2 2
family Thermodesulfobacteriaceae 461 79 164 2 1 2 2 1
family Thermodesulfobiaceae 79 144 17 20 2 4 2 1 2
family Thermodesulforhabdaceae 26
family Thermodesulfovibrionaceae 1082 27 10 3 2 6 2
family Thermofilaceae 2
family Thermoflexaceae 4
family Thermoflexibacteraceae 110
family Thermogemmatisporaceae 440 5 65 3 3
family Thermoguttaceae 39 4 1 1
family Thermohalobacteraceae 1280 74 4 3 6 2
family Thermoleophilaceae 104 1 1
family Thermolithobacteraceae 71
family Thermomicrobiaceae 5 6 1 2
family Thermomonosporaceae 1165 90 239 1 5 11 1 3 2 1
family Thermonemataceae 59 2
family Thermoplasmataceae 1
family Thermoproteaceae 2 1 4 2 1 1
family Thermosediminibacteraceae 292 72 105 1 3 6 2
family Thermospiraceae 2
family Thermosporotrichaceae 21 9
family Thermosynechococcaceae 22 2 1
family Thermotogaceae 157 4 210 1 5 6 2
family Thermotomaculaceae 16 1 2
family Thermovirgaceae 3 3 2
family Thioalkalibacteraceae 36 1 53 2
family Thioalkalispiraceae 61 1 137 4 1
family Thiobacillaceae 844 57 6 205 2 1 1 2
family Thiofilaceae 5
family Thiohalobacteraceae 162 21 1 1
family Thiohalomonadaceae 9 44 3 1
family Thiohalophilaceae 1
family Thiohalorhabdaceae 2289 205 2 1
family Thiohalospiraceae 13
family Thiolinaceae 2
family Thioprofundaceae 10
family Thioreductoraceae 4
family Thiotrichaceae 3299 136 1 146 1 20 2 3 4 2
family Thorselliaceae 79
family Tichowtungiaceae 45 2
family Tilletiariaceae 1
family Tissierellaceae 165 675 1 263 23 1 2 27 7 1 3 2 2 1
family Tolypothrichaceae 1
family Trebouxiaceae 1 1
family Tremellaceae 1
family Treponemataceae 1103 88 97 25 25 4 1 1 3 1
family Trichocoleusaceae 3
family Trichocomaceae 37 8 1 1
family Trichomonadidae 1
family Trichomonascaceae 8 1
family Trichosporonaceae 151 1
family Trichostrongylidae 1
family Tropherymataceae 84 1
family Trueperaceae 24 78 2
family Trypanosomatidae 1 1
family Tsukamurellaceae 276 8 137 4 1 2
family Tuberaceae 1
family Tulasnellaceae 1
family Turicibacteraceae 3007 968 473 98 14 8 14 6 15 3 9 2 5 4 2 1
family Tylenchidae 1
family Ulvaceae 1
family unclassified Actinobacteria (class) (miscellaneous) 2 1
family unclassified Bacillales 20 40
family unclassified Burkholderiales 200 194 18 12 13 4 3 3 2
family unclassified Clostridiales 692 781 9 34 29 5 3 3 1 1 1 1
family unclassified Rickettsiales 4
family Unikaryonidae 8
family Unionidae 609 1
family Uronemataceae 1
family Usitatibacteraceae 13 1
family Ustilaginaceae 110 8 2
family Vacuolariaceae 1
family Vallitaleaceae 135 260 4 3 3 9 1 3
family Veillonellaceae 4651 1534 743 275 30 31 27 31 25 13 13 6 7 6 4 4 3 2 1
family Verrucomicrobiaceae 4073 290 219 223 3 2 6 1 3 4 2 2
family Vibrionaceae 323 151 272 7 5 1 4 3 1
family Vicinamibacteraceae 105 1 3
family Victivallaceae 392 284 1 5 6 3 4 5 4 3 1
family Viviparidae 291 1 1
family Volvocaceae 1
family Vulgatibacteraceae 100 2
family Waddliaceae 33 1 1 1 2
family Wallemiaceae 1
family Weeksellaceae 335 149 9 273 7 5 2 1 6 3 1
family Wenzhouxiangellaceae 59 20 1 1 1 1
family 'Williamsiaceae' 4 4
family Wilmottiaceae 37
family Woeseiaceae 6 1 1
family Xanthobacteraceae 94 19 256 1 1 1 1 6 2
family Xenococcaceae 7
family Yeguiaceae 3
family Yersiniaceae 3507 216 20 274 29 6 23 10 10 2 1
family Zhaonellaceae 2
family Zoogloeaceae 1280 205 1 268 1 1 5 3 2 3 2
family Zooshikellaceae 4 1
family Zymomonadaceae 1 1 56 8 11 2
forma Volvox carteri f. nagariensis 1
forma specialis Buchnera aphidicola (Acyrthosiphon kondoi) 1
forma specialis Buchnera aphidicola (Acyrthosiphon pisum) 2
forma specialis Buchnera aphidicola (Aphis glycines) 1
forma specialis Buchnera aphidicola (Cinara cedri) 1
forma specialis Buchnera aphidicola (Cinara confinis) 1
forma specialis Buchnera aphidicola (Cinara pseudotaxifoliae) 1
forma specialis Buchnera aphidicola (Cinara tujafilina) 1
forma specialis Buchnera aphidicola (Diuraphis noxia) 1
forma specialis Buchnera aphidicola (Myzus persicae) 4
forma specialis Buchnera aphidicola (Schizaphis graminum) 1
forma specialis Buchnera aphidicola (Schlechtendalia chinensis) 1
forma specialis Buchnera aphidicola (Tuberolachnus salignus) 1
forma specialis Buchnera aphidicola (Uroleucon ambrosiae) 1
forma specialis cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 1
forma specialis endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 1
forma specialis primary endosymbiont of Heteropsylla cubana 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans 4
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 3
genus Aaosphaeria 1
genus Abiotrophia 263 199 9 180 2 3 2
genus Absiella 388 544 3 11 3 1 1
genus Abyssalbus 2
genus Abyssicoccus 43 1
genus Abyssivirga 1
genus Acanthamoeba 1 2 1
genus Acanthopleuribacter 55
genus Acaromyces 1 1
genus Acaryochloris 3 11 2
genus Acetanaerobacterium 780 123 6 1 6
genus Acetatifactor 1423 2 6 1 6 1 4 1
genus Acetilactobacillus 16 3 1
genus Acetitomaculum 1047 138 15 3 2
genus Acetivibrio 4603 1443 32 265 7 25 2 6 8 7 2 1
genus Acetoanaerobium 901 235 4 3 7 2 2 1
genus Acetobacter 62 19 260 1 1 4 3 1 2
genus Acetobacterium 4597 704 257 4 4 28 7 3 1
genus Acetobacteroides 354
genus Acetohalobium 68 7 140 1 3 2
genus Acetomicrobium 53 53 1 2
genus Acetonema 378 2 1
genus Acholeplasma 3405 1098 6 248 2 1 6 3 3 2 1
genus Achromatium 66
genus Achromobacter 484 1 268 1 9 4 2 1 2 2 1
genus Acidaminobacter 1153 514 3 3 3
genus Acidaminococcus 3486 795 97 270 14 3 1 25 15 1 4 1 3 3 1
genus Acidianus 2 1 2
genus Acidibacter 53
genus Acidibrevibacterium 6 1 2
genus Acidicaldus 4
genus Acidicapsa 73 1
genus Acididesulfobacillus 2
genus Acidiferrobacter 10 7 3 1
genus Acidihalobacter 165 1 1 2
genus Acidilobus 1
genus Acidilutibacter 5 2
genus Acidimicrobium 654 1 7 1 3 1 1
genus Acidiphilium 130 3 42 2 1 1 2
genus Acidipila 1 1
genus Acidipropionibacterium 34 1 213 5 10 2 1
genus Acidisarcina 8 2
genus Acidisoma 19
genus Acidisphaera 4 1
genus Aciditerrimonas 260 2
genus Acidithiobacillus 39 230 1 1 2
genus Acidobacterium 1 46 3 2
genus Acidocella 12 4 2
genus Acidothermus 61 9 1
genus Acidovorax 295 44 1 266 1 5 1 1 4 2 2 1 1
genus Acinetobacter 998 376 16 272 21 6 4 31 1 14 5 1 4 2 2 1
genus Acrocarpospora 5
genus Actibacter 1
genus Actibacterium 5 1 2
genus Actimicrobium 5
genus Actinoallomurus 7 1
genus Actinoalloteichus 2 162 4 1
genus Actinobacillus 2648 330 90 242 4 7 4 10 5 2
genus Actinobaculum 310 16 17 51 7 1 1 2
genus Actinocatenispora 1237 206 5 1 1
genus Actinocorallia 19 4 2
genus Actinokineospora 19 3
genus Actinomadura 75 49 211 1 1 2 2 1
genus Actinomarinicola 25 2
genus Actinomyces 3199 1231 579 272 8 10 28 6 9 3 2 7 4 2 2 1
genus Actinomycetospora 19 2
genus Actinophytocola 1
genus Actinoplanes 30 141 246 1 5 2
genus Actinopolymorpha 224 2 18 1
genus Actinopolyspora 859 289 36 1 6 1
genus Actinorugispora 2
genus Actinosynnema 17 1 1
genus Actinotalea 2 9
genus Actinotignum 49 97 29 118 1 2
genus Acutalibacter 1 9 1 3 1
genus Acuticoccus 1 2
genus Adhaeretor 2
genus Adhaeribacter 15 34 15 2
genus Adlercreutzia 3267 536 271 24 5 27 27 16 1 5 4 6 4 3 2 1 1
genus Advenella 6 134 1 3 2
genus Aegicerativicinus 1 2
genus Aeoliella 2 1 2
genus Aequoribacter 1
genus Aequorivita 4 9 56 1 1 2
genus Aeribacillus 29 14 2 2
genus Aeriscardovia 241
genus Aerococcus 54 464 16 267 1 5 4 2
genus Aeromicrobium 47 3 1 188 1 3 1
genus Aeromonas 194 7 272 1 4 1 5 2 1
genus Aerosphaera 48
genus Aerosticca 8 3 2
genus Aestuariibacter 3 1
genus Aestuariispira 558 2 1 1
genus Afifella 4 1
genus Afipia 8 1 1 32 3 1
genus Agaribacter 343
genus Agaricus 1
genus Agarilytica 1 2 1
genus Agarivorans 22 3 2 2
genus Agathobacter 1449 106 16 29 19 8 12 1 6 6 4 1
genus Agathobaculum 1505 1 16 8 27 9 11 4 1
genus Aggregatibacter 1181 288 171 225 7 2 3 1 14 1 5 1 2 2
genus Aggregatimonas 4 2
genus Aggregicoccus 2
genus Agitococcus 2
genus Agreia 2 1
genus Agrilactobacillus 184
genus Agrobacterium 126 271 1 5 2 1 2
genus Agrococcus 100 2 3 77 1 1 1 1
genus Agromyces 824 155 177 1 2 1 1 2 1
genus Ahniella 8 1 2
genus Ahrensia 1
genus Akkermansia 3902 1165 486 273 37 25 18 31 9 10 10 4 2 6 4 3 3 2 1 1
genus Albibacterium 1
genus Albidovulum 1 1
genus Albimonas 11
genus Albugo 1
genus Alca 14
genus Alcaligenes 12 2 231 2 3 1
genus Alcanivorax 578 17 253 1 2 2 1
genus Alcyoneusvirus 1
genus Algibacter 1 3 66 1 2
genus Algicella 7
genus Algicola 64
genus Algimonas 34
genus Algiphilus 49
genus Algivirga 4
genus Algorimarina 3
genus Algoriphagus 128 60 1 3 2
genus Aliamphritea 1
genus Aliarcobacter 144 4 1 7 5 1 2
genus Alicycliphilus 21 4 69 1 3 1
genus Alicyclobacillus 7 226 202 3 2 4 2 2 1
genus Alienimonas 43 1
genus Aliicoccus 3
genus Aliidiomarina 23
genus Aliidongia 1
genus Aliifodinibius 247
genus Aliihoeflea 1
genus Aliiroseovarius 2
genus Aliivibrio 90 1 1 2
genus Alishewanella 886 86 2 1
genus Alistipes 19 1484 733 280 61 32 31 32 9 25 9 8 7 6 4 4 3 2 1 1
genus Alkalibacillus 288 6
genus Alkalibacter 147 2 1 2
genus Alkalibacterium 1694 7 1 1 6 7
genus Alkalibaculum 383 1 2
genus Alkalicella 2
genus Alkalicoccobacillus 5
genus Alkalicoccus 52
genus Alkaliflexus 67 1 1 2 2
genus Alkalihalobacillus 35 40 8 244 1 6 2
genus Alkalihalobacterium 22
genus Alkalihalophilus 3 2 2 31 2 2
genus Alkalilimnicola 74 1 1
genus Alkalimarinus 18 1
genus Alkaliphilus 4554 435 254 5 4 6 18 7 2
genus Alkalispirillum 1
genus Alkalispirochaeta 1
genus Alkalitalea 176 1 2
genus Alkanibacter 1
genus Alkanindiges 20 5
genus Allisonella 321 69 3 2 3 1
genus Alloacidobacterium 1
genus Alloactinosynnema 25 5 2
genus Alloalcanivorax 4 12 1 2
genus Allobacillus 2
genus Allobaculum 373 259 8 2 2
genus Allobranchiibius 1
genus Allocatelliglobosispora 2
genus Allochromatium 275 71 1 2
genus Allocoleopsis 1 1
genus Allofrancisella 8 6 1 2
genus Allofustis 28 2 2 1
genus Allohahella 569 132 2 1
genus Alloiococcus 5 124 1
genus Allokutzneria 1 39 1
genus Allomeiothermus 3 8 2 2 2
genus Allomuricauda 91 7 145 5 2
genus Alloprevotella 24 634 82 257 7 2 1 1 3 1
genus Allopseudospirillum 1
genus Allorhizobium 7 3 1
genus Allosaccharopolyspora 10
genus Alloscardovia 305 220 19 5 2 1
genus Allosphingosinicella 19 1
genus Alloyangia 92 2
genus Alphabaculovirus 1
genus Alphainfluenzavirus 1
genus Alphapapillomavirus 5
genus Alphapolyomavirus 3
genus Alsobacter 2
genus Alteracholeplasma 88 70 12 1 2 1 2
genus Altererythrobacter 17 2 249 1 4 1
genus Alteribacillus 8
genus Alteribacter 22
genus Alterileibacterium 2 6
genus Alteriqipengyuania 1
genus Alternaria 4 1
genus Alterococcus 34 1
genus Alteromonas 2 42 255 1 5 2
genus Altibacter 3 1
genus Alysiella 5 1
genus Amaricoccus 179 3 2
genus Amedibacillus 3080 626 1 2 10 3 3 3 2 1
genus Amedibacterium 270 1 2 5 3
genus Aminicella 1012
genus Aminiphilus 523 6 5
genus Aminipila 269 1 1 6 3
genus Aminivibrio 85
genus Aminobacter 32 1 114 4 2 2
genus Aminobacterium 351 38 7 2 2 2
genus Aminomonas 86 4
genus Ammonifex 1734 8 92 1 2
genus Ammoniphilus 268 61
genus Amniculibacterium 2
genus Amphibacillus 51 90 5 2
genus Amphritea 148 6 2
genus Amycolatopsis 54 5 250 1 5 1 1 2 1
genus Amylibacter 5
genus Amylolactobacillus 2
genus Anabaena 2 2 3 2
genus Anabaenopsis 1 1
genus Anaerobacillus 1248 5 20 2
genus Anaerobacter 1 59
genus Anaerobacterium 63 47 1 3 1
genus Anaerobiospirillum 17 46 69
genus Anaerobium 528 1 18 9 1
genus Anaerobranca 3677 643 3 6 7
genus Anaerobutyricum 1427 1 274 25 31 27 20 9 20 9 4 3 1
genus Anaerocella 206
genus Anaerococcus 1821 880 374 272 6 4 1 6 13 3 4 5 1 2 1 1
genus Anaerocolumna 1270 268 31 8 14 6 1 3 1
genus Anaerofilum 4593 889 250 3 7 5 31 1 7 4 2 1 1
genus Anaerofustis 920 1065 204 1 7 7 1 2 1 1
genus Anaeroglobus 828 14 7
genus Anaerohalosphaera 47 1 2
genus Anaerolinea 332 130 4 34 1 2 2
genus Anaeromassilibacillus 1 1 8 8 5 1 4 1
genus Anaeromicropila 170 1 2 1 3
genus Anaeromusa 381 22
genus Anaeromyxobacter 1 590 237 1 1 2 2
genus Anaeropeptidivorans 1 3
genus Anaerophaga 16 1
genus Anaeroplasma 601 241 48 1 1 1 7 2
genus Anaerorhabdus 45 2
genus Anaerosacchariphilus 1 12 1 3
genus Anaerosalibacter 378 4 1
genus Anaerosinus 80 34 1
genus Anaerosphaera 155 6
genus Anaerospora 7 320 1
genus Anaerosporobacter 841 550 1 4 1 1 1
genus Anaerostipes 4201 1532 778 278 38 35 32 32 31 24 10 10 7 4 4 3 2 1 1
genus Anaerotaenia 1 3
genus Anaerotardibacter 4
genus Anaerotignum 1468 264 12 20 8 5 9 4 6 4 3 1
genus Anaerotruncus 4495 1292 730 24 28 21 2 18 2 5 7 7 6 4 4 3 1 1 1
genus Anaerovibrio 4262 31 9 3 1 9 1 1 1
genus Anaerovirgula 2
genus Anaerovorax 119 274 1 13 3
genus Anaplasma 8 6 2
genus Anatilimnocola 2
genus Ancalomicrobium 1
genus Ancrocorticia 1
genus Ancylobacter 26 67 2
genus Anderseniella 1 15 4
genus Andhravirus 13
genus Andreesenia 22
genus Andreprevotia 1
genus Aneurinibacillus 6 77 230 1 3 2
genus Angelakisella 20 6 3 4
genus Angustibacter 5
genus Annwoodia 1
genus Anoxybacillus 223 68 3 230 1 2 1 1 1 2 1
genus Anoxybacter 143 1 4 4 2
genus Anoxynatronum 929 1
genus Anseongella 108 2
genus Antarcticibacterium 61 2
genus Antarcticimonas 1
genus Antarctobacter 2 11 1 2
genus Anthocerotibacter 1
genus Anthracocystis 2 1
genus Anthropogastromicrobium 1
genus Antribacter 1
genus Apibacter 165 1 1 2 1
genus Apilactobacillus 15 7 4 2
genus Apiotrichum 15 1
genus Aplosporella 2
genus Aquabacterium 16 78 5 81 1 1 1
genus Aquamicrobium 3 21
genus Aquaspirillum 64 83 1
genus Aquella 2 1 2
genus Aquibacter 9 1
genus Aquibium 12 1
genus Aquicella 5 12 24 2
genus Aquifex 1 2
genus Aquiflexum 15 18 1 1
genus Aquihabitans 27 2
genus Aquiluna 2 26
genus Aquimarina 10 50 184 1 4 2 1
genus Aquimonas 40 27
genus Aquincola 9 2
genus Aquipluma 78 1
genus Aquipuribacter 6
genus Aquirhabdus 1 2
genus Aquirufa 6 2
genus Aquisalibacillus 3
genus Aquisalimonas 72
genus Aquisphaera 2 91 2 1
genus Aquitalea 65 9 239 1 4 1 2
genus Arabiibacter 1 266 1 1 1 1
genus Arachidicoccus 210 1 4 2 1
genus Arachnia 1 1 205 1 2 1 1 2
genus Arcanobacterium 148 49 31 224 1 1 2 2 1
genus Archaeoglobus 3 4 2 1
genus Archangium 10 103 2 2 1
genus Arcicella 2 152
genus Arcobacter 255 20 1 252 1 5 1 2
genus Arcobacter group 86 17 1 45 1 4 1 2
genus Arcticibacterium 2 1 2
genus Ardenticatena 27 2
genus Arenibacter 5 2 9 4 2
genus Arenibacterium 1
genus Arenimonas 10 45 8
genus Arhodomonas 19
genus Aridibacter 25
genus Aristophania 1
genus Armatimonas 2 3
genus Armillaria 7
genus Aromatoleum 44 2 1
genus Arsenicicoccus 6 4 33 1
genus Arsenophonus 78 33 45 1 2
genus Arthrobacter 490 10 10 269 1 1 6 3 1 2 1
genus Arthronema 22 1
genus Arthrospira 41 3 1 10 1 1 2
genus Asaccharobacter 11 1 7
genus Asaccharospora 3 99 1
genus Asaia 4 6 1 1
genus Asanoa 1
genus Ascidianibacter 1
genus Asinibacterium 12
genus Aspergillus 200 10 2 1 1 1
genus Asteriusvirus 1
genus Asteroleplasma 428 73 7 1 2 1
genus Asticcacaulis 1896 93 130 1 12 1 1
genus Athalassotoga 2
genus Atlantibacter 61 1 2
genus Atlanticus 1
genus Atopobacter 6
genus Atopobium 1527 641 98 12 3 3 2 3 1 3 1 2
genus Atopococcus 30 1
genus Atopomonas 6
genus Atopostipes 112 2
genus Atribacter 2
genus Aurantiacibacter 17 5 1
genus Aurantimicrobium 76 1 2
genus Aurantimonas 66 2 2 1
genus Auraticoccus 3 18 3
genus Aureibacter 15
genus Aureibaculum 13 2
genus Aureicoccus 1
genus Aureimonas 8 162 1 2 2
genus Aureispira 1
genus Aureitalea 1 3
genus Aureliella 1
genus Aureobasidium 7
genus Aureococcus 1
genus Auricoccus 1
genus Auritidibacter 33 1
genus Austwickia 22 1 2
genus Auxenochlorella 1
genus Avibacterium 572 89 39 2 1 4 2
genus Azoarcus 321 4 264 1 1 1 2
genus Azohydromonas 23 3
genus Azomonas 8
genus Azonexus 17 1
genus Azorhizobium 8 62 2
genus Azorhizophilus 11
genus Azospira 25 6 9 215 1 2 2 1
genus Azospirillum 919 412 267 1 2 4 9 3 2 2 2 1
genus Azotobacter 2 157 2 1
genus Babesia 1 1
genus Bacillus 7 6 140 1 1
genus Bacillus 3220 725 66 154 13 26 1 32 22 7 1 6 2 2 1
genus Bacteria Latreille et al. 1825 1
genus Bacterioplanes 1 8 1 1
genus Bacteriovorax 24 82 34 1 2
genus Bacteroides 4653 1543 782 286 65 34 32 32 31 27 15 11 7 6 4 4 3 2 1 1
genus Baekduia 64 2
genus Baia 94
genus Balneatrix 39
genus Balneola 255 401
genus Bariatricus 1 1 1 4 1 1
genus Barnesiella 1153 412 271 27 4 15 31 8 17 2 4 2 4 3 2 1 1
genus Barrientosiimonas 30
genus Bartonella 185 9 254 1 5 2 1
genus Basfia 7 20 1 1
genus Basilea 5 1 2
genus Bathycoccus 1
genus Bdellovibrio 52 8 234 1 1 1 1 2
genus Beauveria 1
genus Beduini 1 2 1 1
genus Beggiatoa 4 1 1 2
genus Beijerinckia 4 3 1 1
genus Belliella 22 8 3 2
genus Bellilinea 15 1
genus Belnapia 3 1 1
genus Bergeyella 81 5 2
genus Berkeleya 1
genus Bermanella 12 1 1
genus Bernardetia 113 19 1 2
genus Berryella 96 1 1 1 2
genus Besnoitia 1 1
genus Beta 1
genus Betapapillomavirus 8
genus Betapolyomavirus 1
genus Beutenbergia 18 1 2
genus Bhargavaea 9
genus Bianquea 2
genus Bibersteinia 2 10 1 1
genus Bifidobacterium 4571 1490 609 282 49 21 25 32 30 14 12 10 6 6 2 3 3 2 1 1
genus Bigelowiella 2 1
genus Bilophila 4136 267 605 178 35 31 20 1 28 20 12 8 7 6 4 4 2 1 1
genus Biomaibacter 186 2
genus Biostraticola 34
genus Bipolaris 3 1
genus Birpovirus 8 1
genus Bisgaardia 116 27 1 1
genus Bittarella (ex Durand et al. 2017) 3 8 6 7 3
genus Bizionia 2 2 1
genus Blastocatella 1
genus Blastochloris 17 105 1 2
genus Blastococcus 24 3 1 6 1 2 1
genus Blastocystis 2 44 1 1 2 1
genus Blastomonas 21 29 1
genus Blastomyces 1 2
genus Blastopirellula 22
genus Blattabacterium 216 1 5 2
genus Blautia 4653 1543 787 279 66 35 31 32 31 27 15 7 7 6 4 4 3 2 1 1
genus Blohavirus 8 1
genus Blumeria 1
genus Bogoriella 10
genus Bombilactobacillus 148 4 1 2
genus Bombiscardovia 17 19
genus Bordetella 47 268 1 4 2
genus Borrelia 44 2 70 4 1
genus Borreliella 48 8 5 1
genus Bos 1
genus Bosea 9 1 157 1 4 2
genus Bosea 15 92
genus Boseongicola 2 31
genus Botrytis 23 9 1
genus Boudabousia 20 20 2
genus Bowdeniella 24
genus Bowmanella 94
genus Brachybacterium 676 27 5 254 1 2 5 2
genus Brachymonas 4
genus Brachyspira 43 13 252 1 5 1 2
genus Brackiella 7 2 1
genus Bradymonas 45 1 1
genus Bradyrhizobium 135 3 10 270 1 5 1 1 2 1
genus Brassicibacter 1138 3 3 4
genus Bremerella 13 2 1 1
genus Brenneria 191 485 208 1 2 3 2
genus Breoghania 45 2 1
genus Brettanomyces 1
genus Brevefilum 60 1 2
genus Brevibacillus 669 153 261 1 1 6 3 1 2 1 1
genus Brevibacterium 297 161 60 266 9 30 1 1 7 2 1 1
genus Brevifollis 27
genus Brevinema 6 1
genus Brevirhabdus 13 1
genus Brevundimonas 122 58 7 259 1 5 2 1 2 1
genus Breznakia 4
genus Breznakibacter 21 4 4 2
genus Breznakiella 2
genus Brigitvirus 129
genus Brochothrix 2595 62 78 1 1 1 1 2
genus Brockia 44
genus Brucella 31 2 4 169 3 1
genus Brucepastera 1 2
genus Brussowvirus 14
genus Bruynoghevirus 1
genus Bryobacter 8
genus Bryocella 4
genus Buchavirus 8
genus Buchnera 100
genus Buchnera 147 1 5 2
genus Bulboplastis 1
genus Bulleidia 1064 92 2 1 2 1 5 2 2 2 1
genus Burkholderia 1257 43 1 274 1 11 5 5 1 1 5 3 2 1
genus Buttiauxella 169 79 1 1
genus Butyribacter 1 2 2 1 1 4
genus Butyricicoccus 951 76 223 23 33 28 8 23 1 3 4 3 2 1
genus Butyricimonas 3651 1201 456 272 31 28 11 23 24 15 12 4 7 4 4 3 2
genus Butyrivibrio 3114 1502 416 271 24 27 26 31 6 1 2 1 7 6 3 1
genus Bythopirellula 17 1
genus Caballeronia 25 91 4 1
genus Caedibacter 6
genus Caenibius 1
genus Caenispirillum 26 1
genus Caenorhabditis 1
genus Caldalkalibacillus 209 1 2 2 1
genus Caldanaerobacter 157 123 1 134 2 1 2
genus Caldanaerobius 61 3
genus Caldanaerovirga 7
genus Caldibacillus 8 40 3 1 2
genus Caldicellulosiruptor 4380 123 261 4 1 6 26 6 2
genus Caldichromatium 6 2
genus Caldicoprobacter 50 119
genus Caldilinea 1490 12 52 3 7 2
genus Caldimicrobium 3 1 1 1
genus Caldimonas 196 26 2 13 1 2 1
genus Caldinitratiruptor 436 1 3 2
genus Caldisalinibacter 763 3
genus Caldisericum 3 9 10 1 1
genus Caldisphaera 3
genus Calditerricola 8
genus Calditerrivibrio 7 20 1 1 2
genus Caldithrix 1082 13 60 1 5 7 2
genus Caldivirga 4 1
genus Callithamnion 1
genus Calochaete 18
genus Calonectria 1
genus Caloramator 4568 1077 1 246 7 8 2 18 7 2
genus Caloranaerobacter 197 2 5 2
genus Caloribacterium 19
genus Calothrix 1889 120 6 5 4 6 2
genus Camelimonas 4
genus Caminibacter 4 4 9 1
genus Caminicella 81 972 2
genus Campylobacter 1650 549 263 274 27 6 3 31 7 6 7 2 2 1 1
genus Candida 94 9 8
genus Candida 9 7
genus Candidatus Absconditicoccus 1
genus Candidatus Accumulibacter 209 3
genus Candidatus Aciduliprofundum 2
genus Candidatus Actinomarina 5
genus Candidatus Alangreenwoodia 2
genus Candidatus Alectryocaccomicrobium 1
genus Candidatus Allobeggiatoa 4
genus Candidatus Allobutyricicoccus 1
genus Candidatus Allocopromorpha 1
genus Candidatus Amoebophilus 4330 3 2 1 1 5 1
genus Candidatus Anammoxoglobus 1
genus Candidatus Annandia 2 1
genus Candidatus Aphodomonas 1
genus Candidatus Aphodoplasma 1
genus Candidatus Aphodovivens 2
genus Candidatus Arthromitus 167 1 5 2
genus Candidatus Atelocyanobacterium 1 2
genus Candidatus Avimicrobium 4
genus Candidatus Avimonas 2
genus Candidatus Avispirillum 2
genus Candidatus Azobacteroides 317 120 4 1
genus Candidatus Babela 2 2
genus Candidatus Bandiella 2
genus Candidatus Bipolaricaulis 17 1
genus Candidatus Blochmanniella 1140 30 4 2 6
genus Candidatus Borkfalkia 2
genus Candidatus Caccoplasma 1
genus Candidatus Cardinium 9 1 1
genus Candidatus Carsonella 2 1
genus Candidatus Cenarchaeum 3
genus Candidatus Chazhemtobacterium 1
genus Candidatus Choladocola 4
genus Candidatus Choladousia 4
genus Candidatus Chromulinivorax 3 1 1
genus Candidatus Cibiobacter 3
genus Candidatus Cloacimonas 15 2 2
genus Candidatus Comchoanobacter 1
genus Candidatus Contubernalis 669 5 2
genus Candidatus Coproplasma 1
genus Candidatus Coprovicinus 2
genus Candidatus Cytomitobacter 2
genus Candidatus Desulfofervidus 1
genus Candidatus Desulforudis 141 1 2
genus Candidatus Doolittlea 4
genus Candidatus Egerieenecus 4
genus Candidatus Egerieimonas 1
genus Candidatus Endobugula 318
genus Candidatus Endolissoclinum 2 1 1
genus Candidatus Endoriftia 2
genus Candidatus Enterenecus 4
genus Candidatus Entotheonella 5
genus Candidatus Epulonipiscium 59 2 1
genus Candidatus Excrementavichristensenella 1
genus Candidatus Faecaligallichristensenella 1
genus Candidatus Faecimorpha 2
genus Candidatus Faecivicinus 3
genus Candidatus Fermentimicrarchaeum 1
genus Candidatus Fimadaptatus 1
genus Candidatus Fimihabitans 1
genus Candidatus Fimisoma 2
genus Candidatus Fimivivens 2
genus Candidatus Fonsibacter 1
genus Candidatus Formimonas 64 1 2 1
genus Candidatus Forterrea 1
genus Candidatus Fukatsuia 3 2
genus Candidatus Gallacutalibacter 3
genus Candidatus Geddesella 2
genus Candidatus Glomeribacter 2194 2 2 7 3
genus Candidatus Gullanella 2
genus Candidatus Halobonum 2
genus Candidatus Hamiltonella 4 1
genus Candidatus Heliomonas 1 1
genus Candidatus Hepatoplasma 1
genus Candidatus Heritagella 2
genus Candidatus Hoaglandella 10
genus Candidatus Howiella 2
genus Candidatus Hydrogenisulfobacillus 45
genus Candidatus Hydrogenosomobacter 1
genus Candidatus Ichthyocystis 1
genus Candidatus Ishikawella 1
genus Candidatus Karelsulcia 84 1 4 2
genus Candidatus Kinetoplastibacterium 41 5 2
genus Candidatus Kleidoceria 1
genus Candidatus Korarchaeum 1
genus Candidatus Korobacter 7 91 1 2
genus Candidatus Kuenenia 6 2
genus Candidatus Limenecus 2
genus Candidatus Limiplasma 3
genus Candidatus Limisoma 1
genus Candidatus Limivicinus 3
genus Candidatus Limivivens 4
genus Candidatus Megaera 1
genus Candidatus Merdicola 2
genus Candidatus Merdimorpha 1
genus Candidatus Merdiplasma 2
genus Candidatus Merdisoma 4
genus Candidatus Merdivicinus 4
genus Candidatus Merdousia 1
genus Candidatus Metalachnospira 4
genus Candidatus Methanoliparum 1
genus Candidatus Methanoperedens 1
genus Candidatus Methanoplasma 2 2
genus Candidatus Methylomirabilis 16
genus Candidatus Methylopumilus 172 1
genus Candidatus Methylospira 76 1
genus Candidatus Midichloria 1 1
genus Candidatus Minimicrobia 1 1
genus Candidatus Moanabacter 1
genus Candidatus Moranella 7
genus Candidatus Mycosynbacter 2
genus Candidatus Nanogingivalis 1
genus Candidatus Nanohalobium 1
genus Candidatus Nanopelagicus 11 1
genus Candidatus Nanopusillus 1
genus Candidatus Nanosynbacter 3 1 1 2
genus Candidatus Nanosyncoccus 1
genus Candidatus Nardonella 1
genus Candidatus Neoehrlichia 1
genus Candidatus Nitrosoglobus 1
genus Candidatus Nitrosotenuis 1
genus Candidatus Nitrotoga 8
genus Candidatus Nucleicultrix 1 1
genus Candidatus Onthomonas 2
genus Candidatus Palibaumannia 3 1 1
genus Candidatus Paracaedibacter 2
genus Candidatus Parachristensenella 2
genus Candidatus Pararuminococcus 4
genus Candidatus Pelagibacter 7 108 1 1 1 2
genus Candidatus Pelagisphaera 2
genus Candidatus Pelethomonas 3
genus Candidatus Peribacter 29
genus Candidatus Phaeomarinobacter 7
genus Candidatus Phlomobacter 37
genus Candidatus Phycorickettsia 1
genus Candidatus Phytoplasma 3924 2 215 1 7 5 5 2 2
genus Candidatus Planktoluna 1
genus Candidatus Planktophila 187 1 2 2 1
genus Candidatus Portiera 6 16 2
genus Candidatus Profftella 1
genus Candidatus Profftia 1
genus Candidatus Prometheoarchaeum 1 2
genus Candidatus Promineifilum 209 1 1
genus Candidatus Protochlamydia 7 1 1 2
genus Candidatus Protoclostridium 1
genus Candidatus Pseudobutyricicoccus 3
genus Candidatus Pseudothioglobus 1
genus Candidatus Pullichristensenella 3
genus Candidatus Pullilachnospira 3
genus Candidatus Puniceispirillum 2 1 1
genus Candidatus Regiella 76 2 1
genus Candidatus Reidiella 21 1
genus Candidatus Rhabdochlamydia 420 1
genus Candidatus Riesia 1
genus Candidatus Ruthturnera 1
genus Candidatus Saccharimonas 7 2
genus Candidatus Scalindua 39
genus Candidatus Scatenecus 2
genus Candidatus Scatocola 2
genus Candidatus Scatomonas 4
genus Candidatus Scatomorpha 2
genus Candidatus Scatosoma 4
genus Candidatus Soleaferrea 3 506 1 4
genus Candidatus Solibacter 7 2 1
genus Candidatus Spyradocola 3
genus Candidatus Stoquefichus 2 120 1 1 6 1
genus Candidatus Sulfidibacterium 2
genus Candidatus Sumerlaea 14
genus Candidatus Symbiobacter 33 1 2
genus Candidatus Syntrophocurvum 44 2
genus Candidatus Tachikawaea 1
genus Candidatus Tammella 1912 2 3
genus Candidatus Tenderia 111 1
genus Candidatus Thioglobus 9 1
genus Candidatus Tokpelaia 13
genus Candidatus Tremblaya 1
genus Candidatus Uabimicrobium 1 1
genus Candidatus Vallotia 1 1
genus Candidatus Velamenicoccus 7 1 2
genus Candidatus Ventrenecus 2
genus Candidatus Ventricola 4
genus Candidatus Vestibaculum 2
genus Candidatus Viadribacter 4 1
genus Candidatus Vidania 1
genus Candidatus Walczuchella 1
genus Candidatus Xianfuyuplasma 2
genus Candidatus Xiphinematobacter 18 2
genus Candidimonas 1
genus Canhaevirus 8 2
genus Canicola 131 3
genus Canis 16
genus Capillimicrobium 1 2
genus Capnocytophaga 59 18 2 268 1 5 1 2 1
genus Caproicibacter 2 1 3
genus Caproicibacterium 1 2 3 1
genus Caproiciproducens 1 269 2 28 6 9 1 3 1
genus Capronia 2
genus Carboxydocella 2743 134 200 4 1 2 2 2
genus Carboxydothermus 38 26 4 2 2
genus Carboxylicivirga 362 1
genus Cardiobacterium 95 142 2 110 1 2
genus Carnimonas 37
genus Carnobacterium 181 5 8 254 1 6 1 2 2 2
genus Carteria 1 2
genus Casadabanvirus 1
genus Casaltella 1033 2 5
genus Casimicrobium 43 2
genus Castellaniella 61 1 1
genus Catabacter 288 100 1 3 1 6
genus Catalinimonas 1
genus Catellatospora 4 2
genus Catellicoccus 1
genus Catenibacillus 1 4 1 1
genus Catenibacterium 1357 422 292 5 14 2 5 6 1 2 2 3 1 1
genus Catenisphaera 128 2 1
genus Catenovulum 6 5 1 2
genus Catenulispora 1 4 24 5 2
genus Catenuloplanes 1
genus Catonella 3665 1501 1 1 3 15 1 6 1 4
genus Caulerpa 1
genus Caulifigura 6
genus Caulobacter 27 20 1 255 2 5 2 1
genus Cavenderia 1 1 1
genus Ceceduovirus 1
genus Cecembia 19
genus Cedecea 105 246 5 1 1
genus Ceduovirus 13
genus Celeribacter 198 4 1
genus Celerinatantimonas 12 2
genus Cellulomonas 81 146 244 1 2 5 2 1
genus Cellulophaga 1 4 129 2 4 2
genus Cellulosibacter 253
genus Cellulosilyticum 1461 15 267 1 2 6 8 3
genus Cellulosimicrobium 4 80 2 1 2
genus Cellvibrio 52 53 205 1 3 2
genus Centipeda 6
genus Cerasicoccus 1237 267 1 10 1 1
genus Cercospora 8
genus Cereibacter 5 7 56 1 2 1 1
genus Cesiribacter 51
genus Cetobacterium 277 54 4 1 2
genus Chaetoceros 1
genus Chaetomium 5
genus Chamaesiphon 5 3
genus Changchengzhania 2
genus Changpingibacter 32 2
genus Chania 24 20 3 2
genus Chattonella 1 1
genus Chelativorans 4 15 23 1 1
genus Chelatococcus 16 5 95 2
genus Chelonobacter 141 2 1
genus Chenggangzhangella 2
genus Chiayiivirga 2
genus Chishuiella 6
genus Chitinibacter 9 1
genus Chitinilyticum 3
genus Chitinimonas 28 57 2
genus Chitiniphilus 1
genus Chitinispirillum 19 1
genus Chitinivibrio 2
genus Chitinivorax 20
genus Chitinolyticbacter 1 21 1 1
genus Chitinophaga 133 30 268 1 3 5 1 3
genus Chlamydia 1 3 101 1 1 2 1 1
genus Chlamydiifrater 1
genus Chlamydomonas 2
genus Chloracidobacterium 18 36 3 2
genus Chlorobaculum 3911 8 218 5 4 22 2 1
genus Chlorobium 8 226 1 1 2
genus Chloroflexus 22 42 2 2
genus Chlorogloeopsis 31
genus Chloroherpeton 24 30 19 1 2
genus Chloroparvula 1
genus Chloropicon 2
genus Chlorosarcinopsis 1
genus Chlorovirus 1 1
genus Chondrocystis 1 2
genus Chondromyces 204 1 70 1 2
genus Chondrus 1
genus Chordicoccus 2 3
genus Christensenella 435 180 273 3 15 24 6 9 2 1 4 7 2 1 3 1 1
genus Christiangramia 79 2 224 1 4 6 2 1
genus Chromatium 824 12
genus Chromatocurvus 1
genus Chromobacterium 469 21 257 9 11 1 2
genus Chromohalobacter 1 2 11 1 1
genus Chroococcidiopsis 7 53 1 2 1
genus Chroococcus 2034 2 2
genus Chroothece 1
genus Chryseobacterium 284 43 2 274 1 5 1 1 6 2 1
genus Chryseoglobus 5 1
genus Chryseolinea 35 152 5 2
genus Chryseomicrobium 39 1 1
genus Chrysochromulina 1
genus Chthoniobacter 45 10
genus Chthonomonas 7 168 13 3
genus Ciceribacter 1
genus Cissites 3
genus Citreitalea 6
genus Citricoccus 13 4 44 1
genus Citrifermentans 5 9 52 2 3 2
genus Citrobacter 919 16 55 275 31 16 7 29 15 3 2 3 3 1 2 1
genus Citromicrobium 1 17 3
genus Cladophialophora 1 1
genus Clavibacter 2 1 111 4 1
genus Clavispora 2
genus Cloacibacillus 381 194 107 236 2 1 2 5 1 3 2 3 1
genus Cloacibacterium 18 2 65 4 4 1 2
genus Clostridiisalibacter 23
genus Clostridioides 199 486 274 39 3 30 25 2 6 6 6 3 2 1
genus Clostridium 4652 1536 777 275 60 34 32 32 31 1 14 3 7 6 4 4 3 2 1
genus Cnuella 3
genus Cnuibacter 1 2
genus Cobetia 6 1 118 1
genus Coccomyxa 1 1
genus Cocleimonas 2
genus Coenonia 10
genus Coetzeevirus 4
genus Cognaticolwellia 1
genus Cognatishimia 1
genus Cohaesibacter 1 53 1
genus Cohnella 1609 83 252 3 6 2 1 7 2 1
genus Coleofasciculus 1
genus Colibacter 1
genus Colidextribacter 1 7 22 9 3 1
genus Colletotrichum 54 1
genus Collimonas 24 39 239 4 2
genus Collinsella 3609 1295 770 275 41 31 20 32 15 12 3 7 6 2 3 3 1 1
genus Colunavirus 1
genus Colwellia 2 62 117 1 4 2 1 1
genus Comamonas 370 44 23 264 1 4 7 1 2 1
genus Commensalibacter 3 2 1
genus Companilactobacillus 475 207 1 258 10 1 13 1 2
genus Conchiformibius 14 3 5 1
genus Conexibacter 13 8 57 3 2
genus Confluentimicrobium 1
genus Congregibacter 13
genus Coniophora 1 1 1
genus Constantimarinum 1
genus Constrictibacter 2 1
genus Coprinopsis 1
genus Coprobacillus 4542 826 154 54 12 5 26 2 22 2 7 7 2 3 1 1
genus Coprobacter 789 336 7 7 8 10 1 5 1 2 4 3
genus Coprococcus 4638 1538 2 275 38 30 31 28 31 2 14 1 7 6 4 4 3 2 1
genus Coprophilus 5
genus Coprothermobacter 79 113 7 4 2
genus Coraliomargarita 1415 123 18 1 1
genus Corallibacter 1
genus Corallococcus 2 197 4 1
genus Cordyceps 5 1
genus Coriobacterium 272 45 229 4 2 3 2 1
genus Corticibacter 5
genus Corynebacterium 1932 885 443 276 30 7 13 31 19 6 1 1 2 1 2 2 1
genus Costertonia 5 1
genus Couchioplanes 5 39 1
genus Coxiella 28 1 1 2
genus Coxiella 2
genus Crassaminicella 238 1 2 2 1
genus Crateriforma 5
genus Craurococcus 2
genus Crenobacter 33
genus Crenothrix 4
genus Criblamydia 43
genus Criibacterium 1
genus Crinalium 2 1 2
genus Crithidia 1
genus Croceibacter 7 1 1 1
genus Croceibacterium 6 1
genus Croceicoccus 96 1 2
genus Croceimicrobium 2
genus Croceitalea 1
genus Crocosphaera 2
genus Cronobacter 83 83 253 6 7 1 2 2 1
genus Cruoricaptor 83 1 1
genus Cryobacterium 4 3 11 143 2 2 1
genus Cryocola 3
genus Cryomorpha 136
genus Cryptanaerobacter 12 3
genus Cryptobacterium 638 1 148 1 2 1 2 1
genus Cryptococcus 3 8 10
genus Cryptococcus 4
genus Cryptosporangium 5
genus Cryptosporidium 9 4
genus Cucumibacter 2
genus Cucurbitaria 1
genus Culturomica 8
genus Cuneatibacter 9 1 1
genus Cupriavidus 21 53 1 271 1 5 1 2 1
genus Curtobacterium 30 1 168 1 1 1 1
genus Curvibacter 162 5 6 67 2
genus Cutaneotrichosporon 4 1
genus Cutibacterium 9 16 29 269 1 3 1 2
genus Cyanobacterium 734 62 55 1 1
genus Cyanobium 7 1 162 1 1 1
genus Cyanophora 1 1
genus Cyanoptyche 1
genus Cyanothece 2 5 1
genus Cyberlindnera 4 4 1
genus Cyclobacterium 50 59 4 2
genus Cycloclasticus 64 20 26 1 1
genus Cyclonatronum 39 3 2
genus Cylindroides 2
genus Cylindrospermopsis 1 2
genus Cylindrospermum 1 1
genus Cyphellophora 1
genus Cystobacter 174 41 44 1 2
genus Cytobacillus 320 201 1 1 5 2 1
genus Cytomegalovirus 1
genus Cytophaga 78 84 1 1 4 2 2
genus Dacrymyces 3
genus Dactylococcopsis 3 1
genus Dactylosporangium 66 7 2
genus Daejeonella 1
genus Dasania 51
genus Daucus 1
genus Debaryomyces 5 8 9
genus Dechloromonas 480 9 230 1 1
genus Deefgea 4 9 1 2
genus Deferribacter 587 37 7 4 4 2
genus Deferrisoma 45 1
genus Defluviicoccus 9 20 1 2
genus Defluviimonas 1 1 15 1
genus Defluviitalea 412 2 6 6 4 1 1
genus Defluviitoga 28 3 1 2
genus Dehalobacter 9 312 255 1 2 5 2 1
genus Dehalobacterium 1922 2 9 213 2 2 9 6 3 4 2 1
genus Dehalococcoides 1 67 240 1 1 1 2
genus Dehalogenimonas 261 188 153 4 2 2
genus Deinobacterium 1
genus Deinococcus 2271 170 6 270 1 1 6 12 4 2 1
genus Delftia 29 22 64 197 3 2
genus Dellaglioa 150 11
genus Delmidovirus 8
genus Deltapolyomavirus 1
genus Demequina 40 76 1 2
genus Dendrosporobacter 86
genus Denitratisoma 642 25 1 198 2 1 1
genus Denitrificimonas 1
genus Denitrobacter 23
genus Denitrobacterium 13 1 244 1 6 3 2
genus Denitrovibrio 2 47 3 2
genus Dependoparvovirus 1
genus Dermabacter 114 104 52 228 1 2 1
genus Dermacoccus 22 1 98 1 1 1 1
genus Dermatobacter 2
genus Dermatophilus 2 23 1
genus Derxia 52
genus Desemzia 3 313
genus Desertibacter 7
genus Deserticella 22
genus Desmospora 15 1
genus Desulfacinum 287 5
genus Desulfallas 82 176 3 1
genus Desulfarculus 157 180 1 2
genus Desulfatibacillum 4 145 5 10 2 1
genus Desulfatiferula 37
genus Desulfatiglans 32
genus Desulfatirhabdium 2
genus Desulfatitalea 9
genus Desulfitibacter 16 130 1 2 1
genus Desulfitispora 79 1
genus Desulfitobacterium 909 144 1 266 9 27 3 3 3 1
genus Desulfobacca 3 28 9 1 1 2
genus Desulfobacter 349 12 21 8 4 1 2
genus Desulfobacterium 5 363 152 1 1 2
genus Desulfobacula 1 50 8 9 2
genus Desulfobaculum 44
genus Desulfobotulus 9 1
genus Desulfobulbus 23 225 239 9 13 2 1
genus Desulfocapsa 11 2 13 8 3 2
genus Desulfocarbo 143 3
genus Desulfocella 440 1 2 5
genus Desulfococcus 20 5 211 9 12 2
genus Desulfoconvexum 1
genus Desulfocurvibacter 1 182 1 2
genus Desulfocurvus 8
genus Desulfofaba 24 65 1
genus Desulfofalx 1066
genus Desulfofarcimen 137 324 103 1 4 2
genus Desulfofrigus 568 45
genus Desulfofundulus 837 130 196 1
genus Desulfofustis 8
genus Desulfoglaeba 264 53 2
genus Desulfogranum 152
genus Desulfohalobium 10 22 3 1
genus Desulfohalophilus 3
genus Desulfohalotomaculum 537 994 1 1 1
genus Desulfohalovibrio 5 84
genus Desulfolucanica 74
genus Desulfoluna 2
genus Desulfolutivibrio 1 67 1 1
genus Desulfomarina 2
genus Desulfomicrobium 282 294 242 9 21 6 2 1
genus Desulfomonile 716 13 53 1 1 2
genus Desulfonatronobacter 6
genus Desulfonatronospira 1
genus Desulfonatronovibrio 699 12 1 2
genus Desulfonatronum 1272 60 2
genus Desulfonauticus 383 27 7
genus Desulfonema 50 2 1
genus Desulfonispora 114
genus Desulfopila 3 229 1
genus Desulfoplanes 25
genus Desulforadius 134 1 1
genus Desulforamulus 307 313 80 20 18 2 1
genus Desulforapulum 7 39 1 2
genus Desulforegula 79 2
genus Desulforhabdus 1
genus Desulforhopalus 6 1
genus Desulfosalsimonas 3
genus Desulfosarcina 293 23 247 1 1 2
genus Desulfoscipio 19 68 1 1 2
genus Desulfosediminicola 64 2
genus Desulfosoma 148 2
genus Desulfosporomusa 2
genus Desulfosporosinus 2171 315 1 255 21 1 16 9 7 2 1
genus Desulfosudis 56 9 8 2
genus Desulfotalea 9 1 2 8 5 2
genus Desulfothermus 15
genus Desulfotignum 4
genus Desulfotomaculum 2552 1300 2 264 24 9 6 15 11 7 3 2 1
genus Desulfotruncus 9
genus Desulfovectis 117 1
genus Desulfovermiculus 9
genus Desulfovibrio 3871 1212 381 272 41 19 7 31 26 10 9 2 7 6 4 2 3 2 1
genus Desulfovirga 38
genus Desulfurella 12 9 9 4 7 1
genus Desulfuribacillus 9 1
genus Desulfurispira 5
genus Desulfurispirillum 900 1 95 1 2 1
genus Desulfurispora 2635 879 2 2 2
genus Desulfurivibrio 6 108 4 3 2
genus Desulfurobacterium 10 11 1 2
genus Desulfurococcus 1 1
genus Desulfuromonas 189 55 235 11 14 2
genus Desulfuromusa 2238 6 1 9 5 1
genus Dethiobacter 99 12 1 2 1 1
genus Dethiosulfatibacter 523 1
genus Dethiosulfovibrio 2989 222 1 16 6 1
genus Devosia 1860 86 227 5 5 1 2
genus Devriesea 43 2 1
genus Dialister 3334 1314 475 272 17 10 11 6 9 5 11 6 5 6 2 3 2 1
genus Diaminobutyricimonas 11 1
genus Diaphorobacter 22 7 209 1 1 2
genus Diaporthe 1
genus Dichelobacter 1 3 10 1 2
genus Dichomitus 1
genus Dichotomaria 1
genus Dichotomicrobium 20
genus Dickeya 93 71 267 1 1 4 2
genus Dictyoglomus 138 39 2 2
genus Dictyomenia 1
genus Dictyostelium 1 2 1
genus Didymella 2
genus Dielma 854 309 2 9 16 4 5 1 1
genus Dientamoeba 1 2
genus Dietzia 144 205 1 189 1 1 2 1
genus Dinoroseobacter 1 26 1 1
genus Diorhovirus 8
genus Diphylleia 1
genus Diplocloster 3
genus Diplorickettsia 14
genus Dirofilaria 1
genus Discophora 10
genus Dispar 20
genus Dissoconium 1
genus Dissulfuribacter 14
genus Dissulfurimicrobium 2
genus Dissulfurispira 1 2
genus Dokdonella 1866 38 18 1 1
genus Dokdonia 28 55 4 2
genus Dolichospermum 3202 2 1 1 11 7 2
genus Dolosicoccus 11 1
genus Dolosigranulum 367 178 2
genus Donellivirus 1
genus Dongia 205 5
genus Dongshaea 27 1 2
genus Dorea 4603 1523 778 236 34 34 32 2 30 22 15 11 7 6 4 4 3 2 1
genus Draconibacterium 21 234 1 2
genus Drancourtella 3 6 3 1 1
genus Drulisvirus 2 1
genus Duffyella 8 1 2
genus Duganella 3 109 1 1
genus Dulcicalothrix 48
genus Dunaliella 2
genus Duncaniella 266 1 5 3
genus Duodenibacillus 7 1 3 1 3 1
genus Dyadobacter 1312 103 221 1 5 5 1 4 2
genus Dyella 10 10 211 1 2 2
genus Dysgonomonas 3976 1003 10 247 9 4 1 4 1 1 7 2 1 1
genus Dysosmobacter 272 13 10 18 10 4 3 1
genus Echinicola 52 241 1 5 2 1
genus Ectobacillus 54 1 2
genus Ectocarpus 1
genus Ectothiorhodosinus 4
genus Ectothiorhodospira 764 39 136 1 2
genus Edaphobacter 493 47 1 2
genus Edwardsiella 390 28 123 5 2 1
genus Edwardsiella 35 129 1
genus Effusibacillus 396 3 2
genus Efquatrovirus 1
genus Eganvirus 2
genus Eggerthella 3390 1325 573 274 42 23 31 32 7 12 7 11 6 6 4 4 3 1 1
genus Eggerthia 594 1 1
genus Egibacter 10 1 1
genus Egicoccus 17 1 1
genus Ehrlichia 1402 11 34 1 2 1 2 1
genus Eikenella 51 11 5 173 1 1 2 2
genus Eimeria 2 1
genus Eionea 1
genus Eisenbergiella 1215 517 19 24 3 9 6 7 6 4 1 1
genus Eisenibacter 218
genus Ekhidna 1 1
genus Elioraea 3 2
genus Elizabethkingia 6 22 259 1 4 2
genus Ellagibacter 1 1
genus Elstera 6
genus Elusimicrobium 39 83 7 1 1 2 2
genus Emcibacter 249 113 3 1
genus Emergencia 2 2 8 1 4 3 1 1
genus Emiliania 1
genus Empedobacter 1 8 169 1 2 1
genus Emticicia 3486 179 117 1 2 1 5 2
genus Encephalitozoon 8
genus Endobacter 1
genus Endomicrobium 110 2 2
genus Endozoicomonas 3 48 2 2
genus Enhydrobacter 55
genus Enorma 239 68 2 2 3 1 1
genus Ensifer 2 227 1 1 2
genus Entamoeba 3 1 1
genus Enterobacter 2111 73 208 275 21 9 6 31 6 2 12 2 7 6 2 3 1
genus Enterocloster 1439 2 275 36 32 28 31 9 11 11 4 4 3 2 1 1
genus Enterococcus 3824 339 139 275 36 26 25 32 21 4 7 2 4 3 2 2 3 2 1 1
genus Enterorhabdus 685 264 7 12 1 14
genus Enteroscipio 2
genus Enterovibrio 1
genus Entomohabitans 1
genus Entomomonas 1 2
genus Entomoplasma 20 37 33 6 1
genus Entomospira 2
genus Ephemeroptericola 1 2
genus Epibacterium 21 1 2
genus Epichloe 4 1
genus Epidermidibacterium 59 1
genus Epilithonimonas 41 2 4 2 2
genus Eponavirus 21
genus Epseptimavirus 2
genus Ercella 419
genus Ereboglobus 129 3
genus Eremococcus 45 21
genus Eremococcus 1 11
genus Eremothecium 1 8
genus Erwinia 1148 238 1 272 2 1 5 1 9 2 2
genus Erysipelatoclostridium 1532 755 54 17 34 29 25 9 20 1 7 3 1 1
genus Erysipelothrix 4034 1014 266 7 3 4 6 7 2
genus Erythrobacter 294 25 252 1 2 1 1
genus Erythromicrobium 22
genus Escherichia 3841 344 1 275 45 10 22 31 19 17 1 4 6 6 3 3 2 1
genus Ethanoligenens 2383 1313 266 7 6 20 3
genus Eubacterium 4475 1542 151 273 35 35 32 31 16 23 11 2 7 6 3 3 1
genus Eudoraea 80
genus Eunotogramma 1
genus Euryhalocaulis 10
genus Eutreptiella 1
genus Euzebya 2726 150 64 1 1 1 2
genus Euzebyella 3 1 2
genus Evansella 7 14 2 2
genus Evtepia 10 11 7 4
genus Ewingella 28 1
genus Exiguobacterium 76 59 260 1 6 3 2
genus Exophiala 43 1 1 1
genus Exserohilum 2
genus Exsudoporus 1
genus Extensimonas 2
genus Extibacter 8 3
genus Ezakiella 426 230 3 2 4 5 2
genus Fabibacter 7
genus Facklamia 305 1185 50 11 2 9 1
genus Faecalibacillus 2 2 9 4 3 1
genus Faecalibacter 1 1
genus Faecalibacterium 4651 1537 770 286 47 34 32 32 23 6 15 11 7 6 4 4 3 2 1
genus Faecalibaculum 261 1 2 3
genus Faecalicatena 1052 6 5 20 1 3 1 1
genus Faecalicoccus 932 3 2 1 5 1 1
genus Faecalimonas 9 1 2 5
genus Faecalitalea 521 201 273 3 18 18 5 2 1 1
genus Faecousia 4
genus Falcatimonas 1 1 14 1
genus Fallax 2
genus Falseniella 1038 2 6
genus Falsihalocynthiibacter 2
genus Falsiporphyromonas 379 2
genus Falsirhodobacter 1 1 1
genus Falsiroseomonas 13 1
genus Fangia 15
genus Fannyhessea 315 2 6 2 1
genus Fastidiosipila 162 74 253 1 1 4 2
genus Feifania 3
genus Felixounavirus 4
genus Fenollaria 831 2 3 2 1 7 1 2
genus Fermentimonas 239 1 4
genus Ferribacterium 1 2
genus Ferrigenium 1
genus Ferrimicrobium 74 2 1
genus Ferrimonas 51 49 121 2 2
genus Ferriphaselus 39
genus Ferrithrix 321
genus Ferroglobus 1
genus Ferrovibrio 2 66 2
genus Ferrovum 3 1
genus Ferruginibacter 111 2
genus Fervidicella 18 1
genus Fervidicoccus 1
genus Fervidobacterium 54 47 4 1 2
genus Fibrella 1 212 1 3 2
genus Fibrobacter 334 273 85 183 2 1 2
genus Fibroporia 1
genus Fictibacillus 49 217 1 5 2
genus Filifactor 1349 505 252 9 17 14 1 1 2
genus Filimonas 62 4 1 2
genus Filomicrobium 2 1 1
genus Fimbriimonas 8 73 37 2 2
genus Finegoldia 2020 1112 444 274 23 4 3 29 18 3 4 1 2 2 1
genus Fischerella 16 1 1
genus Flagellatimonas 2
genus Flagellimonas 1 5 1 2
genus Flammeovirga 1246 36 189 1 4 1 2
genus Flaviaesturariibacter 1
genus Flavicella 4
genus Flaviflexus 32 175 3 2 1
genus Flavihumibacter 3 25 1 2
genus Flavilitoribacter 9
genus Flaviramulus 1
genus Flavisolibacter 74 1 1 229 1 5 1 2
genus Flavitalea 9
genus Flavivirga 7 1 2 2
genus Flavobacterium 202 45 394 272 3 5 1 7 3 1
genus Flavonifractor 1491 766 276 26 30 31 27 9 1 11 7 6 4 3 1
genus Flectobacillus 6 97
genus Flexibacter 7 1 2
genus Flexispira 15
genus Flexistipes 1 98 7 1 1
genus Flexithrix 19
genus Flintibacter 269 2 24 2 2 9 3 3 1
genus Flocculibacter 1
genus Floricoccus 2
genus Fluoribacter 1
genus Fluviibacter 2
genus Fluviicola 5 18 199 1 2 1 2
genus Fluviimonas 640 1
genus Fluviispira 3
genus Fodinibius 5 2
genus Fodinicola 2
genus Fodinicurvata 506 1 7
genus Fomitiporia 1
genus Fonsecaea 3
genus Fontibacillus 3
genus Fontibacter 42
genus Fonticella 201 2
genus Formicincola 2
genus Formosa 3 177 4 2
genus Fournierella 1 8 16 5 1 4
genus Francisella 205 72 2 251 4 5 1 2 1
genus Franconibacter 16 1
genus Frankia 7 227 1 4 2 1
genus Frateuria 5 46 1 2
genus Frederiksenia 5 2 1
genus Fretibacter 17
genus Fretibacterium 21 98 242 1 8
genus Friedmanniella 60 35 68 1 1
genus Frigidibacter 1 4 1
genus Frigoribacterium 5
genus Frigoriglobus 1
genus Frischella 2 5 3 2
genus Frisingicoccus 8 4 1
genus Frondihabitans 55 1 1
genus Fructilactobacillus 222 150 1 78 1 1 2
genus Fructobacillus 220 55 1
genus Fuchsiella 33
genus Fucophilus 4
genus Fuerstia 22
genus Fuerstiella 28 2
genus Fulvibacter 1
genus Fulvimarina 1
genus Fulvitalea 86
genus Fulvivirga 12 97 1 3
genus Fumia 2
genus Fundidesulfovibrio 1667 108 3
genus Furfurilactobacillus 1913 69 31 1 1 2
genus Fusarium 55 8 1 1
genus Fuscovulum 1 7 3 1
genus Fusibacter 370 343 3 3 6 3
genus Fusicatenibacter 2 1509 759 2 9 16 22 1 11 4 1 1
genus Fusobacterium 2075 633 121 271 36 5 2 31 2 1 2 6 3 2 2 3 1 1
genus Gabonia 1 3 3
genus Gabonibacter 1 1 10 1
genus Gaetbulibacter 1
genus Gaeumannomyces 1
genus Gaiella 59 2
genus Galbibacter 7 1
genus Galdieria 3 1
genus Galenea 58 2
genus Gallaecimonas 5 6 1
genus Gallibacterium 85 58 1 26 1 1 2
genus Gallicola 93 70 1
genus Gallintestinimicrobium 1
genus Gallionella 745 26 48 1 1 1 2
genus Galliscardovia 1
genus Gammapapillomavirus 3
genus Gammaretrovirus 3
genus Ganoderma 1
genus Garciella 26 2
genus Gardnerella 203 173 40 214 1 1 1 2 2 1 3 2
genus Garicola 2
genus Garritya 2
genus Geitlerinema 49 2 1
genus Gelderlandvirus 2 1
genus Gelria 22 210 2 2
genus Gemella 4358 901 154 270 7 3 17 6 9 2 6 3 2
genus Geminicoccus 100 5
genus Geminisphaera 12
genus Geminocystis 19 1 2
genus Gemmata 16 10 1 122 1 2
genus Gemmatimonas 17 41 186 1 2
genus Gemmatirosa 11 159 1 2
genus Gemmiger 1367 1 14 15 11 9 10 4 1
genus Gemmobacter 2 12 4 2 1
genus Gemsvirus 1
genus Geoalkalibacter 9 140 2 1
genus Geoanaerobacter 7 9 2 3
genus Geobacillus 1198 92 7 247 1 10 2 8 1 3 2
genus Geobacter 256 69 269 3 5 1 1 2
genus Geodermatophilus 14 23 19 2
genus Geofilum 137
genus Geomicrobium 54
genus Geomonas 1 2
genus Geopsychrobacter 4
genus Georgenia 36 40 128 2
genus Georgfuchsia 2 1
genus Georhizobium 14 1 2
genus Geosmithia 1
genus Geosporobacter 253 2 6 3
genus Geotalea 120 51 3 2
genus Geothermobacter 2
genus Geothermobacterium 1
genus Geothrix 2289 772 2 2
genus Geotoga 1
genus Geotrichum 1 5
genus Geovibrio 16 1 33 4 2
genus Gephyromycinifex 18 1
genus Giardia 7 4
genus Gibbsiella 30 4 1
genus Giesbergeria 50 1
genus Gilliamella 12 2 2
genus Gillisia 3111 56 2 1 1
genus Gilvibacter 17
genus Gilvimarinus 1
genus Gimesia 2 1 1
genus Glaciecola 597 110 115 3 2
genus Glaciimonas 2 1
genus Glaesserella 4 97 1 2 1
genus Gleimia 123 57 1
genus Globicatella 22 2 1 1
genus Gloeobacter 21 184 1 1 1 2
genus Gloeocapsa 2
genus Gloeomargarita 1
genus Gloeophyllum 1
genus Gloeothece 1 1 10 2
genus Gloeotrichia 4
genus Gluceribacter 1
genus Gluconacetobacter 36 8 21 1
genus Gluconobacter 462 3 220 1 2 1
genus Gluta 1
genus Glutamicibacter 376 85 247 1 1 1
genus Glycocaulis 1 29 1 1
genus Glycomyces 184 15 1 1
genus Gonium 1
genus Gorbachella 1 1 1
genus Gordonia 110 178 1 182 1 5 2 1
genus Gordonia 78
genus Gordonibacter 1018 456 273 6 23 23 3 7 8 7 3 3 1
genus Gottfriedia 1 2
genus Gottschalkia 209 202 12 23 1 2 2 1
genus Gracilibacillus 354 43 1 1 2
genus Gracilibacter 725 3 3 2 5
genus Gracilimonas 408 2 1
genus Gracilinema 4 1 2
genus Granulibacter 2 101 4
genus Granulicatella 2181 157 321 37 3 13 2 8 2 1 5 1 2
genus Granulicella 254 38 216 1 2
genus Granulosicoccus 90 17 1 2
genus Gregarina 1
genus Grimontella 1
genus Grimontia 57 2
genus Grosmannia 1 1
genus Gryllotalpicola 12 13 1 1
genus Gudongella 172 1 2 2
genus Guggenheimella 564 2 5
genus Guillardia 1
genus Guizotia 22
genus Gulbenkiania 11 2
genus Gulosibacter 129 17 29 2 1 2
genus Guopingia 4
genus Guyparkeria 36 1 53 2
genus Gymnodinialimonas 2
genus Gynuella 57 2 1 2
genus Haematobacter 29 3 1
genus Haematococcus 1
genus Haematomicrobium 1
genus Haematospirillum 4 2 1
genus Haemonchus 2
genus Haemophilus 3491 1071 528 273 18 20 18 9 6 10 14 6 1 3 2
genus Haererehalobacter 1
genus Hafnia 14 119 14 2 8 3
genus Hahella 575 278 51 3 2
genus Haladaptatus 2
genus Halalkaliarchaeum 1
genus Halalkalibacter 3 1 23 2 2
genus Halalkalibacterium (ex Joshi et al. 2022) 19 3 2
genus Halamphora 2
genus Halanaeroarchaeum 1
genus Halanaerobacter 35 5 4
genus Halanaerobaculum 6
genus Halanaerobium 854 14 201 1 5 3 2 2
genus Halapricum 1 1
genus Halarchaeum 1 1
genus Halarcobacter 8 51 1 3 2
genus Halarsenatibacter 100
genus Haliangium 428 38 89 3 3 1
genus Haliea 6
genus Halimeda 1
genus Halioglobus 1 170 1 2
genus Haliscomenobacter 1 130 77 3 2
genus Hallella 657 370 6 2 2 6 1
genus Haloactinopolyspora 2
genus Haloanella 2
genus Haloarcula 15 1
genus Halobacillus 40 224 1 5 2 2 1
genus Halobacteriovorax 23 39 108 1 4 2
genus Halobacterium 20
genus Halobacteroides 8 31 1 2
genus Halobaculum 3 1
genus Halobellus 10 1 1
genus Halobiforma 1 1
genus Halocatena 1
genus Halocella 11 137 1 4
genus Halochromatium 282 269 2
genus Halodesulfovibrio 1 7
genus Halodesulfurarchaeum 1
genus Haloechinothrix 3
genus Haloferax 1 14 1 2
genus Haloferula 61 2
genus Halogeometricum 1
genus Haloglycomyces 1
genus Halolactibacillus 37
genus Halolamina 3 1
genus Halomarina 1
genus Halomicroarcula 1
genus Halomicrobium 2 1 1
genus Halomicronema 2 19 3 2
genus Halomonas 408 528 269 3 1 1 5 1 1 3 2 1 1
genus Halonatronum 3
genus Halopenitus 2
genus Halopiger 1
genus Haloplanus 9 1
genus Haloplasma 30 1 1
genus Halopolyspora 206 2
genus Haloprofundus 1 1
genus Halopseudomonas 12 21 2 2
genus Haloquadratum 1
genus Halorhabdus 4 2 1
genus Halorhodospira 113 111 63 1 1 2 1
genus Halorientalis 1 1
genus Halorubrum 38 1
genus Halorussus 1
genus Halosimplex 4 1
genus Halosolutus 1
genus Halospina 8
genus Halospirulina 1
genus Halostagnicola 1 1
genus Halostella 1
genus Halotalea 1 32 1 1
genus Haloterrigena 2 1 1
genus Halothece 1
genus Halothermothrix 235 11 2 2 6 2 2
genus Halothiobacillus 70 56 75 2 1
genus Halovivax 2
genus Halpernia 5
genus Halydictyon 1
genus Hamadaea 1
genus Hankyongella 19 1
genus Hanseniaspora 4
genus Haploplasma 232 35 1 4 2 2
genus Harryflintia 1 4 3 2
genus Hartmannibacter 55 2 1
genus Hathewaya 4599 973 223 23 24 2 7 2
genus Hazenella 26
genus Helcococcus 183 267 19 113
genus Helicobacter 1677 55 3 256 24 30 4 1 2 1
genus Heliimonas 10
genus Heliobacillus 21
genus Heliobacterium 9 50 241 1 1 2 1
genus Heliomicrobium 1 88 1 1 2
genus Heliophilum 52 1
genus Heliorestis 1679 11 70 7 5 2
genus Heliothrix 3
genus Hellea 8
genus Helmutkoenigia 7
genus Hendrixvirus 9
genus Henriciella 601 1
genus Hephaestia 2
genus Herbaspirillum 1812 85 251 256 2 13 4 1 3 2 1
genus Herbiconiux 27 2
genus Herbinix 617 266 2 6 5 4 1 3 1
genus Herminiimonas 118 189 55 4 1 1
genus Herpetomonas 1
genus Herpetosiphon 6 15 1
genus Herposiphonia 1
genus Hespellia 1492 500 2 15 6 1 1
genus Heterobasidion 1 1
genus Heterodera 1
genus Heterostelium 1 1
genus Heyndrickxia 155 2 1 86 1 3 1 2 1
genus Hippea 13 2 2
genus Hirschia 1 1
genus Hirsutella 1 1
genus Histophilus 18 84 2 1
genus Histoplasma 1
genus Hoeflea 7 1 1
genus Holdemanella 2514 687 13 2 15 3 1 6 3 1
genus Holdemania 4125 1301 565 2 21 22 27 30 8 8 7 4 4 2 1 1
genus Hollowayvirus 1
genus Holophaga 11
genus Holospora 1
genus Holzapfeliella 87
genus Hominenteromicrobium 3
genus Hominicoprocola 3
genus Hominifimenecus 3
genus Hominilimicola 3
genus Hominisplanchenecus 4
genus Hominiventricola 3
genus Homo 220 1 1
genus Hoppeia 1
genus Hornefia 1
genus Horticoccus 2
genus Howardella 1117 123 8 2 2
genus Hoylesella 2979 1316 292 92 13 1 2 7 8 3 7 2 3
genus Hoyosella 43 22
genus Huchismacovirus 3
genus Hugenholtzia 38 2
genus Hujiaoplasma 41
genus Humibacter 43 24
genus Humidesulfovibrio 75 344
genus Humisphaera 1
genus Hungateiclostridium 576 539 2 1 3 4 3 6
genus Hungatella 1476 269 14 31 29 15 6 11 9 7 3 3 2 1 1
genus Hutsoniella 257
genus Hwangdonia 20
genus Hyaloscypha 1
genus Hydrocarboniclastica 16 2
genus Hydrocarboniphaga 3537 2 10
genus Hydrocoleum 50 1
genus Hydrogenibacillus 180 2 3 4 2 1
genus Hydrogeniiclostridium 1 2 1
genus Hydrogenimonas 2 2
genus Hydrogenispora 656
genus Hydrogenoanaerobacterium 1264 222 2 3 1
genus Hydrogenobacter 17 3 2
genus Hydrogenobaculum 35 2 2 2 1 3
genus Hydrogenophaga 65 13 1 255 1 1 1 2
genus Hydrogenophilus 2141 232 3 15 1 14
genus Hydrogenothermus 22
genus Hydrogenovibrio 97 33 48 1 2
genus Hydrotalea 29
genus Hylemonella 17 25
genus Hymenobacter 3137 82 1 270 1 5 6 2 1
genus Hymenolepis 1
genus Hypericibacter 124 2
genus Hyphobacterium 1
genus Hyphococcus 2
genus Hyphomicrobium 690 31 213 4 2 4 2
genus Hyphomonas 271 20 159 2 3 1 1
genus Hyphopichia 1 2
genus Iamia 1 7 2
genus Ianmoorea 3
genus Ichthyobacterium 1 1
genus Ichthyophthirius 1
genus Ideonella 2 1 2
genus Idiomarina 159 24 143 1 1 2
genus Ignatzschineria 4 8 1
genus Ignavibacterium 51 47 60 1 1 2
genus Ignavigranum 103 2 2
genus Ihubacter 2 27 8 1
genus Ileibacterium 2
genus Ilumatobacter 200 8 2
genus Ilyobacter 111 5 2
genus Ilyomonas 1
genus Immersiporthe 1
genus Immundisolibacter 33 4 2
genus Impatiophila 3
genus Imperialibacter 29
genus Imtechella 3 1 2
genus Indibacter 46 1
genus Indioceanicola 52 3 2
genus Infirmifilum 1
genus Inhella 38 2
genus Inquilinus 27 16 1
genus Insolitispirillum 2902 292 8
genus Intestinibacillus 1 1 8 4
genus Intestinibacter 1169 769 10 18 21 1 9 9 3
genus Intestinibaculum 266 1 6 3
genus Intestinimonas 1495 721 270 21 33 29 19 9 1 10 4 3 1 1
genus Intrasporangium 3 10
genus Iocasia 3
genus Iodobacter 13 18 3 2
genus Iso 1
genus Isoalcanivorax 558 3 29 1 1
genus Isobaculum 1
genus Isochromatium 8
genus Isoptericola 87 1 2
genus Isosphaera 16 2
genus Ithacavirus 1
genus Izhakiella 107 2
genus Jahgtovirus 8 1
genus Jahnella 4
genus Jaminaea 1
genus Janibacter 5 130 1 2
genus Jannaschia 12 1 3 1 1
genus Janthinobacterium 189 7 249 4 3 3 2
genus Japonica 3
genus Jatrophihabitans 12 15 1 2
genus Jejubacter 37 2
genus Jeongeupia 44 2 1
genus Jeotgalibaca 257 1 5 2
genus Jeotgalibacillus 1 20 141 1 1 2
genus Jeotgalicoccus 43 98 1 1 2
genus Jhaorihella 1
genus Jiangella 56 3 93 4 1
genus Jiaodavirus 1
genus Jingyaoa 2
genus Jinshanibacter 5 3 2
genus Johnsonella 4547 1161 10 1 12 7
genus Jonesia 100 124 17 2
genus Jonquetella 214 10 1 1 1
genus Jouyvirus 1
genus Juglans 1
genus Jutongia 1
genus Kaistella 1 8 3 2
genus Kaistia 27 42 1
genus Kallipyga 108 1 1
genus Kallotenue 31
genus Kalmanozyma 1
genus Kamptonema 1
genus Kandleria 188 2
genus Kangiella 41 88 1 2
genus Karlodinium 1
genus Kastovskya 13
genus Kaustia 1
genus Kayfunavirus 1
genus Kazachstania 2 8
genus Kehishuvirus 4
genus Keratinibaculum 31 1 2
genus Kerstersia 1 1
genus Ketobacter 39 2 1
genus Ketogulonicigenium 3 100 2 1
genus Kibdelosporangium 96 2
genus Kiloniella 65 3 2
genus Kineobactrum 67 1
genus Kineococcus 20 18 19 1 2
genus Kineosporia 41 1
genus Kineothrix 1 1
genus Kingella 35 5 2 43 1 2
genus Kinneretia 1 1
genus Kiritimatiella 58 1 2
genus Kistimonas 1
genus Kitasatospora 115 21 139 5 1 5 2
genus Klebsiella 1435 93 144 275 32 7 13 31 17 20 9 3 5 6 2 2 1 1
genus Kluyvera 33 539 142 1 4 7 2
genus Kluyveromyces 1 8
genus Knoellia 4
genus Kocuria 139 43 6 261 9 1 24 1 2
genus Kofleria 4
genus Koinonema 1 2
genus Koleobacter 2
genus Komagataeibacter 55 251 1 4 2
genus Komvophoron 1
genus Kordia 1 27 2 1
genus Kordiimonas 2 2
genus Kosakonia 223 321 264 4 4 2 1
genus Kosmotoga 38 2 5 1 2
genus Kouleothrix 2
genus Kovacikia 2
genus Kozakia 1 11 3 1
genus Kribbella 296 428 27 1 2 5 2
genus Kriegella 1 1
genus Krischvirus 1
genus Kroppenstedtia 4 200 1 1 2
genus Ktedonobacter 1
genus Ktedonospora 1
genus Ktedonosporobacter 35 1 2
genus Kurthia 7 132 1 3 2 1
genus Kushneria 1216 15 164 1 6 2 2
genus Kuttervirus 1
genus Kutzneria 28 1 3
genus Kwoniella 3
genus Kyrpidia 192 90 2 2
genus Kytococcus 1 1 2 65 1 1
genus Labilibacter 3
genus Labilibaculum 200 1 4 3
genus Labilithrix 49 63 2
genus Labrenzia 242 1 2 2 1
genus Labrys 12
genus Labrys 20 29 6 2
genus Laceyella 51 8 12 1 2
genus Lachancea 1
genus Lachnoanaerobaculum 1505 12 268 2 5 6 8 1 3 1
genus Lachnobacterium 4340 1159 12 5 27 1 30 7 4 4 3 1 1
genus Lachnoclostridium 1537 2 275 40 35 29 25 9 23 1 3 3 4 3 3 2 1 1
genus Lachnospira 4650 1537 713 279 36 34 32 30 31 20 15 1 7 6 4 4 3 2 1
genus Lachnotalea 3 8 2 1
genus Lacibacter 12 3 2 1
genus Lacibacterium 136
genus Lacihabitans 7
genus Lacimicrobium 47 1 1
genus Lacinutrix 4 2 34 4 2
genus Lacipirellula 36 1
genus Lacnuvirus 1
genus Lacrimispora 579 1 273 22 31 15 32 1 1 1 3 3 1
genus Lacticaseibacillus 1029 104 141 268 10 3 9 13 1 5 9 3 1 3 1
genus Lactiplantibacillus 595 25 65 263 14 11 23 5 1 4 3 1 1
genus Lactivibrio 2
genus Lactobacillus 4221 1514 571 277 41 22 22 26 29 8 7 2 6 6 2 4 2 2 1
genus Lactococcus 2374 892 260 274 15 9 10 32 17 1 6 5 3 6 4 3 2
genus Lactonifactor 1095 477 4 26 1 9 1 7
genus Lactovum 408
genus Lactuca 1
genus Lacunisphaera 86 3 2
genus Lagaffevirus 1
genus Lagierella 1
genus Lambdavirus 3 1
genus Lamprocystis 3
genus Lampropedia 1
genus Lancefieldella 217 174 4 243 9 2 14 1 1 1 2
genus Lapidilactobacillus 4 5 2
genus Laribacter 5 150 3 2
genus Larkinella 1 1 2
genus Larsenimonas 1
genus Lasiodiplodia 1
genus Latilactobacillus 14 33 24 10 4 15 2
genus Lautropia 270 63 8 202 1 2 1 2
genus Lawsonella 239 1 2 3 2
genus Lawsonia 5
genus Lawsonia 39 672 108 3 1 3
genus Lawsonia 4
genus Lawsonibacter 3 6 10 2 6 4 1 1
genus Leadbettera 59 1 1 2 1
genus Leadbetterella 14 33 3 2
genus Lebetimonas 38
genus Leclercia 265 1 1 2
genus Lederbergia 2 8 1 2
genus Lederbergvirus 4
genus Leeuwenhoekiella 9 1
genus Legionella 3160 92 1 261 1 5 16 3 2 2 1
genus Leifsonia 3 1 216 1 2 1 1
genus Leishmania 1 1
genus Leisingera 172 2 2
genus Lelliottia 1470 2 165 4 1 2 2
genus Leminorella 4 24 1 2
genus Lentibacillus 846 73 152 2 2
genus Lentihominibacter 4
genus Lentilactobacillus 261 7 14 219 10 2 21 1 2
genus Lentilitoribacter 13 1
genus Lentisphaera 6 2
genus Lentivirus 4
genus Lentzea 5 1 15 1 1 1
genus Leptodesmis 2
genus Leptofauchea 8
genus Leptogranulimonas 1 2
genus Leptographium 1
genus Leptolinea 144
genus Leptolyngbya 1175 1 1 124 1 4 2 2
genus Leptonema 33
genus Leptosphaeria 16 1
genus Leptospira 1285 33 224 2 5 2
genus Leptospirillum 20 35 2 2
genus Leptothermofonsia 1
genus Leptothrix 26
genus Leptothrix 708 5 27 1 2 1
genus Leptotrichia 194 70 29 268 2 5 1 2
genus Leucobacter 59 64 221 1 2 2 1
genus Leuconostoc 2336 1099 78 263 11 3 7 18 17 1 6 2 1 2 1
genus Leucosporidium 1
genus Leucothrix 21 6 1
genus Levilactobacillus 180 64 5 223 7 1 16 1 2
genus Levilinea 1
genus Levyella 499 2
genus Lewinella 189 11 2
genus Leyella 2073 800 7 2 2 2 4 2 2 1
genus Libanicoccus 1
genus Liberibacter 139 3 18 5 1 7
genus Lichenicola 2
genus Lichenihabitans 13 1 1
genus Lichtheimia 1
genus Lientehia 1
genus Ligaoa 2
genus Ligilactobacillus 621 235 65 268 12 5 31 1 6 1 1 3 1
genus Lignipirellula 2
genus Lihuaxuella 1
genus Limibacillus 22
genus Limibacter 1
genus Limihaloglobus 32 1 2
genus Limimaricola 2
genus Limimonas 6
genus Limisphaera 32 2
genus Limnobacter 3466 38 1 6 1 2 1
genus Limnobaculum 14 1 2
genus Limnochorda 3 175 2 2
genus Limnoglobus 17 2
genus Limnohabitans 45 3 121 2 2 1
genus Limnoraphis 3 1
genus Limnospira 2 6
genus Limosa 13
genus Limosilactobacillus 726 434 75 267 14 2 4 26 1 2 1 1 1 2 2
genus Liquorilactobacillus 230 227 1 2 2
genus Lishizhenia 2 1
genus Listeria 837 322 1 271 9 1 11 1 3 1 2 1 1
genus Litchfieldia 1 1
genus Litoreibacter 4 1
genus Litoribacillus 88
genus Litoribacter 47
genus Litoribrevibacter 15
genus Litorilinea 31 2 1
genus Litorilituus 90 4 1 2
genus Litorimonas 1
genus Litorivicinus 300 67 3 1 3
genus Lobosporangium 1
genus Lodderomyces 1 1
genus Loigolactobacillus 16 227 1 1 1 2
genus Loktanella 10 11 1
genus Longibaculum 271 2 5 1 5 2 3
genus Longicatena 1 3 2 3 6 1 3 1
genus Longilinea 23 3
genus Longimonas 127
genus Longimycelium 2
genus Lonsdalea 47 66 2
genus Lotharella 1
genus Lughvirus 135
genus Luminiphilus 73
genus Lunatimonas 3
genus Luoshenia 2
genus Luteibacter 2527 65 125 2 3 2
genus Luteibaculum 2
genus Luteimicrobium 12
genus Luteimonas 83 27 164 1 1 2 1
genus Luteipulveratus 15 1
genus Luteitalea 105 1 3
genus Luteithermobacter 15 1 1
genus Luteivirga 4
genus Luteococcus 13 1
genus Luteolibacter 1995 43 114 2 1 2
genus Lutibacter 36 4 2
genus Lutibacterium 21
genus Lutibaculum 1
genus Lutimonas 4
genus Lutispora 494 3 1 4
genus Lymphocryptovirus 41
genus Lyngbya 2
genus Lysinibacillus 700 24 5 265 2 6 1 3 1 2 1
genus Lysinimonas 7 1
genus Lysobacter 1064 111 1 255 1 5 3 1 2 1
genus Lyticum 2
genus Macellibacteroides 5
genus Macrococcus 1783 15 249 2 4 8 3 2
genus Macroventuria 1
genus Mageeibacillus 266 1 2 8 2 1
genus Magnetococcus 25 194 1 1 2
genus Magnetospira 29 23 1 1
genus Magnetospirillum 26 17 238 1 1 2
genus Magnetovibrio 4 2
genus Mahella 35 142 1 2
genus Mailhella 3 1 2
genus Maioricimonas 12 2
genus Malaciobacter 106 190 1 5 2
genus Malacoplasma 179 5 1 2
genus Malassezia 99 1
genus Maledivibacter 97 1
genus Maliibacterium 96 6 3
genus Mamastrovirus 1
genus Mameliella 13 1
genus Mammaliicoccus 36 30 1 49 1 3 2
genus Mammarenavirus 27
genus Mangrovibacillus 2
genus Mangrovibacter 6
genus Mangroviflexus 2
genus Mangrovivirga 2
genus Mannheimia 2001 138 8 233 2 1 1 6 2
genus Marasmitruncus 6
genus Maribacter 5 1 202 1 4 2
genus Maribellus 71 1 3
genus Maribius 12
genus Maricaulis 26 25 6 2
genus Marichromatium 731 38 1 45 1
genus Maridesulfovibrio 167 22 65 5 17 1 2
genus Marinagarivorans 1 1
genus Mariniblastus 2 2
genus Marinicauda 2 1
genus Marinicella 12
genus Marinifilum 375
genus Mariniflexile 5 9 4 2
genus Marinilabilia 67 1 2
genus Marinilactibacillus 90 4 2
genus Marinimicrobium 2 5
genus Marininema 2 2 3
genus Mariniphaga 23
genus Mariniplasma 2
genus Mariniradius 9
genus Marinitalea 4
genus Marinithermofilum 2
genus Marinithermus 2 43 2
genus Marinitoga 71 5 72 5 6 2
genus Marinobacter 222 194 269 1 5 1 2 1 1
genus Marinobacterium 4 38 95 4 1
genus Marinococcus 137 4 1 1
genus Marinomonas 46 52 77 1 2 2
genus Marinoscillum 36
genus Marinospirillum 963 76
genus Marinosulfonomonas 1
genus Marinovum 24 1
genus Mariprofundus 51 148 1 1 2
genus Marisediminicola 11 1
genus Marisediminitalea 3
genus Marispirillum 101
genus Maritalea 7 1 2
genus Maritimibacter 3
genus Marivirga 3 5 2 1 2 1
genus Marivita 7 1
genus Marivivens 1
genus Marixanthomonas 36 1
genus Marmoricola 24 11 1 1
genus Marnyiella 4
genus Marseillibacter 1 33
genus Martelella 2 1 238 1 1 2 1
genus Marvinbryantia 1399 606 7 3 15 2 16 1 3 6 4 4 3 2 1
genus Massilia 21 5 263 1 19 5 2 1
genus Massilicoli 5 2
genus Massiliimalia 8 4 2 1
genus Massilimalia 1
genus Massilimicrobiota 1 2 4 1 1
genus Massilioclostridium 1 1 21 7 2 4 1
genus Massiliprevotella 3 5
genus Massilistercora 270 1 5 6 2 1 3 1
genus Mastigamoeba 1
genus Mechercharimyces 23 39
genus Mediterranea 2 3 4 22
genus Mediterraneibacter 4642 1539 2 279 56 32 29 21 9 24 11 7 6 4 4 3 2 1 1
genus Megalodesulfovibrio 1 43 4 1
genus Megamonas 734 356 65 273 12 2 2 5 1 1 4 3 1 1
genus Megasphaera 4295 1071 519 272 11 1 30 8 2 1 7 3 1 1
genus Meinhardsimonia 1
genus Meiothermus 1164 39 1 181 1 2 2
genus Melaminivora 1 24 1
genus Melanopsichium 1
genus Melghiribacillus 14
genus Melghirimyces 87
genus Melioribacter 966 38 2 11 4 6 1
genus Melissococcus 273 5 53 3 2
genus Melittangium 9 96 1 1
genus Meniscus 76
genus Merdibacter 1 5 3 1 3
genus Merdimmobilis 1 4
genus Merdimonas 1 1 1 22 2 1
genus Mergibacter 2
genus Merismopedia 1
genus Merotricha 1
genus Mesoaciditoga 6
genus Mesobacillus 17 84 218 1 3 2
genus Mesoflavibacter 1 1 2
genus Mesomycoplasma 11 523 4 2 2 1
genus Mesonia 7 15
genus Mesoplasma 2118 54 150 6 1 2 2
genus Mesorhizobium 27 10 6 267 1 5 1 2 1
genus Mesosutterella 3 1
genus Mesotoga 34 1 2
genus Metabacillus 69 2 123 1 7 2
genus Metabacterium 1 2
genus Metakosakonia 2 1 1
genus Metallibacterium 10
genus Metallosphaera 2 1
genus Metalysinibacillus 62
genus Metamycoplasma 16 49 4 1 2
genus Metaplanococcus 6 1
genus Metaprevotella 2
genus Metarhizium 5
genus Methanimicrococcus 1
genus Methanobacterium 7 76 8 5 2
genus Methanobrevibacter 1081 315 216 175 31 2 3 21 7 4 9 1 6 2 2 1 1 1
genus Methanocaldococcus 1 2 8 5 2
genus Methanocella 34 2
genus Methanococcoides 1 1
genus Methanococcus 1 35 9 12 2
genus Methanocorpusculum 5 1 1 5 4 3 2
genus Methanoculleus 45 2
genus Methanofervidicoccus 1
genus Methanofollis 1 2 1
genus Methanogenium 2
genus Methanohalobium 4 5 1
genus Methanohalophilus 8 5 1
genus Methanolacinia 2 2
genus Methanolinea 1 1
genus Methanolobus 3 1
genus Methanomassiliicoccus 55 16 21 8 1 2
genus Methanomethylophilus 23 4 2
genus Methanomethylovorans 2
genus Methanomicrobium 2
genus Methanoplanus 1
genus Methanoregula 1 6 2
genus Methanosalsum 3 2
genus Methanosarcina 3 1 152 9 15 2
genus Methanosphaera 207 36 39 21 11 1 1 15 2 2
genus Methanosphaerula 1
genus Methanospirillum 1 4 3 2
genus Methanothermobacter 3 3 1
genus Methanothermococcus 1 1
genus Methanothermus 1
genus Methanothrix 1 11 1 2
genus Methanotorris 1
genus Methylacidimicrobium 1 2
genus Methylacidiphilum (ex Ratnadevi et al. 2023) 3 1 1 2
genus Methylarcula 32
genus Methylibium 29 78 1 1
genus Methylobacillus 2109 129 18 2 2 1
genus Methylobacter 14 2 1
genus Methylobacterium 250 53 4 262 1 5 2 1
genus Methylocaldum 6 2 20 4 2
genus Methyloceanibacter 97 1
genus Methylocella 121 8 80 4 1 1
genus Methylococcus 2 121 1 2
genus Methylocystis 13 173 2 2
genus Methylogaea 100 1 2 2 1
genus Methyloglobulus 101
genus Methylohalobius 29
genus Methylohalomonas 15
genus Methyloligella 3 34 1
genus Methylomagnum 24 2
genus Methylomarinovum 29 1
genus Methylomicrobium 2 12 62 1 1
genus Methylomonas 8 8 238 1 5 2
genus Methylomusa 139 1 4 2
genus Methylonatrum 2966 6 1 1
genus Methyloparacoccus 2
genus Methylophaga 101 333 38 1 1 1
genus Methylophilus 21 9 1
genus Methylopila 7
genus Methylorubrum 192 4 2
genus Methylosinus 35 57 3 1 1
genus Methylosoma 2
genus Methylosphaera 5
genus Methylotenera 23 102 1 2
genus Methylothermus 1
genus Methylotuvimicrobium 2 7 1 1
genus Methyloversatilis 188 36 60 2 1
genus Methylovirgula 8 2
genus Methylovorus 69 1 1
genus Methylovulum 3 5 1 2
genus Metschnikowia 4 1
genus Meyerozyma 1
genus Micavibrio 79 3 1
genus Microaerobacter 52
genus Microbacter 281 2
genus Microbacterium 485 377 267 1 5 2 1 2 2 1
genus Microbispora 12
genus Microbulbifer 14 1 259 1 4 2 1
genus Microcella 2 24 1
genus Microchaete 3
genus Micrococcus 92 5 4 214 1 1 1
genus Microcoleus 728 1
genus Microcystis 23 28 2 1 2 1
genus Microlunatus 4 168 188 1 2 1
genus Micromonas 1
genus Micromonospora 141 21 259 1 5 1 1 6 2 1
genus Micropruina 1 169 1 1
genus Microscilla 2 1
genus Microsporum 1
genus Microterricola 63 4 1
genus Microtetraspora 50 23
genus Microvenator 4 1
genus Microvirga 33 12 189 1 2
genus Microvirgula 8 35 1 4 1
genus Microvirus 7
genus Millionella 1
genus Millisia 1
genus Miltoncostaea 1 2
genus Minicystis 5 79
genus Miniimonas 20 1 1
genus Miniphocaeibacter 1 2
genus Minwuia 1
genus Mirabilis 2
genus Mitsuaria 2 36 3
genus Mitsuokella 1980 131 18 3 2 2 1 19 1
genus Mixia 1
genus Mixta 200 1 2
genus Mizugakiibacter 35
genus Mobilibacterium 2
genus Mobilicoccus 35
genus Mobilitalea 152 3 1
genus Mobiluncus 409 469 123 171 9 2 2 13 1 1 1 2
genus Modestobacter 23 108 20 1
genus Modicisalibacter 1
genus Moesziomyces 2
genus Mogibacterium 3880 1185 491 270 2 1 6 3 25 10 1 7 1 3 1 1
genus Moheibacter 15
genus Moineauvirus 97 1
genus Molluscipoxvirus 2 1
genus Monaibacterium 11
genus Mongoliicoccus 37
genus Mongoliitalea 1 2
genus Monoglobus 2 6 4 3 1
genus Monomastix 1
genus Monoraphidium 1
genus Monosiga 2
genus Mooglevirus 3
genus Mooreia 10
genus Moorella 3706 69 245 2 5 19 1 2
genus Moorena 80 4 2
genus Moraxella 122 372 2 252 1 2 18 3 2
genus Morchella 1
genus Mordavella 1 2 6 1 4 9 1
genus Morganella 19
genus Morganella 417 215 4 183 11 1 20 1 7 1 2
genus Morganella 16
genus Moritella 3 1 49 1 2
genus Morococcus 1
genus Mortierella 1
genus Moryella 606 1203 659 8 4 10 2 2
genus Motilibacter 10
genus Mucilaginibacter 53 267 1 4 5 2 2
genus Mucinivorans 90 237 1 1 2
genus Mucisphaera 32 1 2
genus Mucispirillum 6 5 4 2
genus Multiformis 1
genus Murdochiella 2 227 269 1 1 5 5 2
genus Muribacter 5
genus Muribaculum 268 2 5 1 2 3
genus Muricomes 1 6 1 2
genus Muriicola 1 1
genus Murimonas 1422 3 3 1 2 1 1
genus Mushuvirus 1
genus Musicola 31 17 1 2
genus Muvirus 7
genus Myceligenerans 73
genus Mycetocola 3 12 2 1 2
genus Mycetohabitans 35 19
genus Mychonastes 1
genus Mycoavidus 3 2
genus Mycobacterium 653 61 23 270 1 2 5 3 1 1 2 1
genus Mycobacteroides 1 198 3 2
genus Mycolicibacillus 10
genus Mycolicibacter 4 4 127
genus Mycolicibacterium 27 29 270 1 6 1 2 1
genus Mycoplana 11 1 1
genus Mycoplasma 3994 1125 4 271 10 1 6 13 1 4 2 1
genus Mycoplasmoides 8 2 2
genus Mycoplasmopsis 3595 328 69 1 3 2 2
genus Myohalovirus 1
genus Myroides 112 36 234 1 1 1 1 2
genus Mytilinidion 1
genus Myxococcus 1 236 1 2 2
genus Nafulsella 14
genus Naganishia 1
genus Nakamurella 2 157 4 2
genus Nakaseomyces 8
genus Nanchangia 2
genus Nannochloropsis 1
genus Nannocystis 265 22 1
genus Natranaerobaculum 4
genus Natranaerobius 54 50 1 2
genus Natranaerofaba 1 2
genus Natranaerovirga 1121 3 7 8
genus Natrarchaeobaculum 5
genus Natribacillus 4
genus Natrinema 10 1 2
genus Natroniella 5 11
genus Natronincola 3758 108 3 1 7
genus Natronobacterium 1
genus Natronococcus 3 1 1
genus Natronoglycomyces 2
genus Natronomonas 11 28 2
genus Natronorubrum 1 1
genus Natronosporangium 1
genus Naumannella 32
genus Naumovozyma 8
genus Nautilia 2 7 117 1 1
genus Ndongobacter 256 1 1 2
genus Necropsobacter 12
genus Negativibacillus 1 1 7 26 5 9 3 4 3
genus Negativicoccus 2503 519 125 247 2 3 12 1 2
genus Neglectibacter 6 9 7 3 1 1
genus Neisseria 926 57 63 271 2 10 4 5 16 4 1 7 2 1 1
genus Neoasaia 2 18 1
genus Neobacillus 2 183 1 3 1 2
genus Neobittarella 7 2 2 1
genus Neochlamydia 1 1 1
genus Neokomagataea 133 1
genus Neolewinella 42 1
genus Neomegalonema 27 1
genus Neomicrococcus 34
genus Neonectria 1
genus Neorhizobium 204 1 4 2
genus Neorickettsia 35 1 1 1
genus Neoroseomonas 7
genus Neoscardovia 95
genus Neospora 5
genus Neotabrizicola 1
genus Nephroselmis 1
genus Neptuniibacter 7
genus Neptunomonas 13 1 20 2
genus Nesterenkonia 70 137 52 1 2 1 1
genus Neurospora 1 8
genus Nevskia 82 26 1 3
genus Nia 6
genus Niabella 962 1150 180 1 4 2 1 2 1
genus Niallia 10 1 5 2
genus Niameybacter 1
genus Niastella 102 4 1 92 2 2
genus Nibribacter 72 27 1 1
genus Nibricoccus 15 2
genus Nicoletella 22 2
genus Nicoliella 2
genus Nisaea 251 1 1 2
genus Nissabacter 109 1
genus Nitratidesulfovibrio 5 16
genus Nitratifractor 4 47 1
genus Nitratireductor 1 1 141 1 4 2
genus Nitratiruptor 2 1 1
genus Nitriliruptor 13 7 2
genus Nitrincola 6 1 2 2
genus Nitritalea 16
genus Nitrobacter 10 5 39 1
genus Nitrococcus 60
genus Nitrogeniibacter 25 2
genus Nitrolancea 32
genus Nitrosococcus 729 50 27 1 2
genus Nitrosomonas 396 2 188 3 3 3 3 2 2
genus Nitrosophilus 2
genus Nitrosopumilus 8 8 3 1 1
genus Nitrososphaera 27 1
genus Nitrosospira 34 1 88 2 1 1
genus Nitrosovibrio 24
genus Nitrospina 16 16 2
genus Nitrospira 6 18 237 1 1 2
genus Nitrospirillum 5 83 2 2
genus Niveibacterium 1
genus Niveispirillum 356 92 1 1
genus Nocardia 55 15 265 1 5 1 1 2 1
genus Nocardioides 25 188 265 2 5 1 2 1
genus Nocardiopsis 5 59 185 1 4 2 2 1
genus Nodularia 610 1 1
genus Nodularia 609 2 3 1
genus Nonagvirus 1
genus Nonlabens 7 242 1 5 2 1 1
genus Nonomuraea 819 51 225 1 2 5 1 1 2 1
genus Nordella 1 32 1
genus Norovirus 1
genus Nosocomiicoccus 15 6 2
genus Nostoc 1908 3 230 1 6 7 3 2 1
genus Nostocoides 41 48 10
genus Novacetimonas 7 1
genus Novibacillus 11 9 5 2
genus Noviherbaspirillum 49 52 1
genus Novispirillum 2908 210 2 4 2
genus Novisyntrophococcus 2 3 1
genus Novosphingobium 243 58 4 246 1 2 3 1 1 2 1
genus Numidum 1
genus Obesumbacterium 20 1
genus Oblitimonas 3 1 2
genus Occallatibacter 2
genus Occultella 7 2
genus Oceanibacterium 1
genus Oceanibaculum 2
genus Oceanicaulis 10 3
genus Oceanicoccus 56 1 1 1
genus Oceanicola 6
genus Oceanidesulfovibrio 5 23 77 1 2
genus Oceanihabitans 1
genus Oceanimonas 2 40 114
genus Oceanirhabdus 21 2 4
genus Oceanisphaera 57 3 7 1
genus Oceanispirochaeta 11 80 1 2
genus Oceanithermus 112 1 2 1
genus Oceanitis 1
genus Oceanobacillus 1 39 190 1 5 1 2 1
genus Oceanobacter 1
genus Oceanospirillum 23 178
genus Oceanotoga 2 1
genus Ochrobactrum 484 6 24 231 1 4 1 1
genus Octadecabacter 13 3 109 3 2
genus Octavius 4
genus Odoribacter 4177 1153 590 275 44 30 24 26 27 23 12 10 7 6 4 4 3 2 1 1
genus Oecophyllibacter 18 1
genus Oedogonium 1
genus Oengusvirus 111 1
genus Oenococcus 1062 134 93 4 5 3 1 2
genus Oerskovia 9 26 2
genus Ohtaekwangia 83 2
genus Okeania 2
genus Olea 1
genus Olegusella 2
genus Oleibacter 4
genus Oleidesulfovibrio 272 914 81 22 14 2
genus Oleiphilus 3 3 2
genus Oleispira 7 1 1
genus Oleomonas 416 1
genus Oligella 283 51 2 8 1
genus Oligoflexus 1
genus Oligosphaera 48
genus Oligotropha 1 1 1
genus Oliverpabstia 2 8 4 1
genus Olivibacter 3626 29 2 16 5 3
genus Olleya 9 5 1
genus Olsenella 290 894 58 271 9 7 2 24 3 2 2 1
genus Oncorhynchus 1
genus Opitutus 32 10 167 4 2
genus Orbus 5 13 2
genus Orenia 87
genus Oribacterium 4181 1525 28 1 10 25 8 10 1 1 7 1 1
genus Oricola 7 1
genus Orientia 109 1
genus Ornatilinea 9
genus Ornithinicoccus 2
genus Ornithinimicrobium 170 4 2
genus Ornithobacterium 5 195 1 4 3
genus Orrella 82 1 2
genus Orthopoxvirus 1
genus Oryza 1
genus Oryzomicrobium 43 1
genus Oscheius 1
genus Oscillatoria 1345 1 16 4 2
genus Oscillibacter 1528 700 274 33 34 32 31 9 6 1 1 7 6 3 1
genus Oscillochloris 4 1
genus Oscillospira 4650 7 588 24 17 30 22 14 7 6 4 2
genus Oslovirus 1
genus Ostreobium 1
genus Ostreococcus 2
genus Otariodibacter 35 7 1
genus Ottowia 141 3 2
genus Ovatus 22
genus Owenweeksia 3 1 1 1
genus Oxalicibacterium 121
genus Oxalobacter 1823 390 180 14 7 2 25 4 7 1 6 6 4 3 2 2
genus Oxalophagus 90
genus Oxobacter 363 5 5
genus Oxynema 6 3 1
genus Pacificimonas 1
genus Pacificitalea 1 1 1
genus Paecilomyces 2 1
genus Paenacidovorax 6 1
genus Paenalcaligenes 3 1
genus Paenalkalicoccus 5 2
genus Paenarthrobacter 1 4 1
genus Paenibacillus 1644 1293 1 274 4 10 6 11 4 1 5 2 1
genus Paeniclostridium 149 254 10 26 2
genus Paeniglutamicibacter 1 1
genus Paenimyroides 12 1
genus Paeniroseomonas 4 1
genus Paenisporosarcina 70 126 98 9 12 2
genus Pahexavirus 6
genus Palaeococcus 1 1
genus Palmaria 1
genus Palpitomonas 1
genus Paludibacter 8 155 238 2 3 5 1 1 3
genus Paludibacterium 5 1 2
genus Paludibaculum 11 1 2
genus Paludicola 3
genus Paludisphaera 71 3 2
genus Panacagrimonas 4
genus Panacibacter 29 1 2
genus Pandoraea 5 27 263 1 4 1 2 1
genus Pandorina 1
genus Pankowvirus 1
genus Pannonibacter 3 132 4 1
genus Pantoea 176 176 272 2 1 5 6 1 2
genus Papillibacter 833 397 3 27 9 4 1
genus Parabacteroides 4618 1488 717 281 55 33 32 32 26 21 15 11 7 6 4 4 3 2 1 1
genus Parablautia 1
genus Paraburkholderia 1068 142 270 2 1 5 1 2 2 1
genus Parachlamydia 3 1 1 2
genus Paracholeplasma 780 19 1 2 1 2 1
genus Paracidovorax 16 10 30 3 4
genus Paraclostridium 45 246 29 22 1 1 2
genus Paracoccidioides 1
genus Paracoccus 105 170 1
genus Paracoccus 74 61 1 106 1 1 5 1 2 1
genus Paracrocinitomix 2
genus Paradesulfitobacterium 130 1
genus Paradesulfovibrio (ex Waite et al. 2020) 1 2
genus Paradevosia 2
genus Paraeggerthella 236 15 4 3 1
genus Parafannyhessea 96 92 1 3
genus Paraferrimonas 2
genus Parafilimonas 130
genus Paraflavitalea 142 4 2
genus Parageobacillus 263 20 1 2
genus Paraglaciecola 10 29 1 2 1
genus Parahymenobacter Reddy 2013 3
genus Paralcaligenes 2 1
genus Paraliobacillus 1 17 3 2
genus Paramaledivibacter 3
genus Paramecium 1
genus Paramuribaculum 2
genus Paraneptunicella 1 2
genus Paraoerskovia 18 2
genus Parapedobacter 1771 27 1
genus Paraperlucidibaca 1
genus Paraphaeosphaeria 1
genus Paraphotobacterium 1
genus Paraprevotella 3720 1143 201 272 22 6 8 32 22 2 8 2 6 2 3 3 2 1
genus Pararheinheimera 34 12
genus Pararhodospirillum 1 58 1 4 2
genus Pararoseburia 3
genus Parasaccharibacter 12 1 1
genus Parascardovia 931 4 1 159 1 1 4 1 2
genus Parasedimentitalea 11 1
genus Parasegetibacter 6
genus Parashewanella 8 8 1 2
genus Parasphaerochaeta 6 3 36 1 2
genus Parasphingopyxis 2 42
genus Parasphingorhabdus 7 7 1
genus Parasporobacterium 567 161 1 15 6
genus Parastrongyloides 1
genus Parasutterella 1264 558 148 14 20 23 8 2 1 6 7 4 1
genus Paratractidigestivibacter 2
genus Paraurantiacibacter 7
genus Parazoarcus 71 1 1 1
genus Parechovirus 3
genus Paremcibacter 6 1
genus Paroceanicella 58 2
genus Parolsenella 262 1 2 2
genus Parvibacter 219 88 2 1 2
genus Parvibaculum 3 15 12 2
genus Parvicella 2
genus Parvimonas 309 77 256 5 2 5 1 1 1 3 2 1 2
genus Parvularcula 26 1 1 1
genus Pasteurella 438 50 20 243 1 4 3 1 2
genus Pasteuria 217
genus Patulibacter 5 7 1
genus Paucibacter 137 1 73 1 1 2 1
genus Paucidesulfovibrio 2 8
genus Paucilactobacillus 44 351 167 1 2 1 2
genus Paucimonas 1 8 2
genus Paulinella 1
genus Pauljensenia 168 1 1 4 1
genus Pavlova 1
genus Pectinatus 4037 241 182 2 1 1 12 7 3
genus Pectobacterium 84 2 265 1 4 2 1
genus Pediococcus 2658 258 30 233 5 1 4 14 1 3 2 1
genus Pedobacter 4602 336 2 265 4 20 5 28 1 7 3 2 1
genus Pedococcus 3 3
genus Pedomicrobium 125 8 4
genus Pedosphaera 27
genus Peduovirus 2 1
genus Pelagerythrobacter 2 2
genus Pelagibaca 17 1 1
genus Pelagibacterium 1 22 1
genus Pelagibius 3
genus Pelagicoccus 1620 101 1 5 4
genus Pelagovum 1
genus Pelistega 8 1 3 2
genus Pelobacter 61 37 240 1 4 2
genus Pelodictyon 141 1 2
genus Pelolinea 13 129 1 1 2
genus Pelomonas 38 18 6 1
genus Pelosinus 424 242 1 5 2 1
genus Pelospora 101
genus Pelotalea 1
genus Pelotomaculum 1745 208 176 1
genus Peltaster 1
genus Peltaster 5
genus Penaeicola 1
genus Penicilliopsis 2
genus Penicillium 28 1 1
genus Peptacetobacter 153 168 258 2 2 3
genus Peptidiphaga 1
genus Peptoanaerobacter 87 4
genus Peptoclostridium 305 623 224 1 2 2
genus Peptococcus 4577 616 381 61 11 4 11 1 2 1 1
genus Peptoniphilus 4485 1326 412 274 5 4 3 3 22 4 7 1 2 1 1
genus Peptostreptococcus 1111 745 184 74 4 2 2 2 4 2 1 1 1
genus Peredibacter 15
genus Perexilibacter 48
genus Peribacillus 17 69 236 1 3 2 1
genus Periphykon 1
genus Periweissella 3 1 1
genus Perlucidibaca 3
genus Permianibacter 42 4 2
genus Persephonella 2 11 1 2
genus Persicimonas 108 1 2
genus Persicirhabdus 50 2
genus Persicitalea 77 2 1
genus Persicobacter 8 14 1 4 1 2 2
genus Peterkaempfera 34 2
genus Peteryoungia 1 2
genus Petrimonas 46 263 1 5 3
genus Petrocella 260 1 3 3
genus Petroclostridium 1
genus Petrotoga 24 1 1 4 2
genus Phaeobacter 50 1 227 1 4 2 2
genus Phaeobacterium 16
genus Phaeochromatium 15
genus Phaeocystidibacter 8
genus Phaeodactylibacter 8
genus Phaeodactylum 1
genus Phaeospirillum 7 1 2
genus Phaffia 1
genus Phakopsora 1
genus Phanerochaete 1
genus Phascolarctobacterium 4277 1282 522 270 43 18 22 31 22 4 9 6 7 4 4 3 2 1 1
genus Phaseolibacter 15
genus Phenylobacterium 210 80 1 90 4 1 1 2
genus Phialocephala 1
genus Phietavirus 8
genus Phifelvirus 3
genus Phlebiopsis 1
genus Phnomibacter 16 2
genus Phoca 11
genus Phocaeicola 4651 1541 759 285 56 33 30 32 9 26 11 7 6 2 4 3 2 1 1
genus Phocea 1 10 5 9 1 3 1
genus Phoenicibacter 254 1 2 2
genus Phormidium 43 1
genus Photobacterium 19 42 232 7 2 1 2 1
genus Photorhabdus 1 128 114 2 4 2 1
genus Phototrophicus 2
genus Phreatobacter 1 177 1 2
genus Phycicoccus 11 2 44 1 2 1
genus Phycis 6
genus Phycisphaera 2 92 1 2
genus Phycomyces 1
genus Phyllobacterium 34 29 15 1 2
genus Phytoactinopolyspora 16
genus Phytobacter 2 27 1
genus Phytohabitans 66 1 2 1
genus Phytomonospora 51
genus Phytophthora 1
genus Pichia 5 8 5
genus Picobirnavirus 1
genus Picosynechococcus 2 2
genus Pigmentiphaga 272 175 1 3 4 2
genus Pijolavirus 2
genus Pikeienuella 20
genus Pilibacter 72
genus Pilimelia 79 4
genus Pimelobacter 2 13 3
genus Pirellula 7 27 11 2
genus Pirellulimonas 26 2
genus Piscibacillus 1
genus Pisciglobus 21
genus Piscinibacter 16 1
genus Piscirickettsia 14 11 1 1 1
genus Pisolithus 1
genus Pistricoccus 12 1
genus Planctomyces 11 182 1 1 2
genus Planctopirus 2 6 8 1 1
genus Planifilum 3033 60 1 1 6
genus Planktomarina 4
genus Planktothricoides 1
genus Planktothrix 8 17 2 3 2
genus Planococcus 1013 201 157 2 6 1 2 1
genus Planococcus 2 114 1
genus Planomicrobium 263 6 36 170 1 1 2
genus Planotetraspora 1
genus Plantactinospora 75 2 2
genus Plantibacter 49 1 1
genus Plasmodium 5 2 1
genus Plasticicumulans 180 2 2
genus Pleionea 2
genus Plenodomus 1
genus Pleomorphomonas 8 10 30 1
genus Plesiocystis 1 5
genus Plesiomonas 98 34 2 4 1 2
genus Pleurastrum 1
genus Pleurocapsa 1 2
genus Pluralibacter 141 43 225 1 5 2
genus Pochonia 1 8
genus Podospora 63
genus Polaribacter 57 2 254 1 5 1 5 2 1
genus Polaromonas 50 7 229 1 2 1 2
genus Pollutimonas 4 1 1
genus Polyangium 2
genus Polycladomyces 83 2
genus Polymorphobacter 7
genus Polymorphospora 2
genus Polymorphum 17 3
genus Polynucleobacter 891 9 253 1 2 2 3 2 1
genus Polysiphonia 1
genus Polysphondylium 1
genus Polystyrenella 2
genus Pontibaca 15
genus Pontibacillus 691 311 40 1 1 2
genus Pontibacter 1813 33 1 262 1 4 1 1 2
genus Pontibrevibacter 5
genus Ponticaulis 4
genus Pontimonas 5 1
genus Pontivivens 1 1
genus Porcincola 1
genus Poriferisphaera 1 2
genus Porphyra 1
genus Porphyrobacter 7 1 164 1 1 1
genus Porphyromonas 3920 1237 328 272 16 14 25 24 16 2 9 6 2 3 3 2 1
genus Porphyropsis 1
genus Portibacter 5
genus Porticoccus 5
genus Poseidonibacter 3 1
genus Posidoniimonas 1
genus Postia 1 1
genus Povalibacter 6
genus Pradoshia 70 2
genus Pragia 304 78 1 4 2
genus Prauserella 6 16 1 1 1
genus Prescottella 4 19 1
genus Prevotella 4574 1517 429 277 49 19 12 32 31 14 4 7 6 4 4 3 2 1
genus Prevotellamassilia 3 1 1
genus Priestia 15 6 75 1 1 6 2 1
genus Prochlorococcus 6 2 231 1 4 2
genus Prochlorothrix 7
genus Profundibacter 10 1 2
genus Prolixibacter 8 1
genus Promicromonospora 6 2
genus Propionibacterium 100 52 99 257 9 10 4 23 1 1 2
genus Propioniciclava 85 1
genus Propionicimonas 3 1
genus Propioniferax 220 3 1
genus Propionigenium 181 13 5
genus Propionimicrobium 1 10 238
genus Propionispira 63 1
genus Propionispora 3228 167 7 1
genus Propionivibrio 288 51 1
genus Prosthecobacter 536 35 1 1 2
genus Prosthecochloris 10 213 5 2
genus Prosthecomicrobium 20
genus Protaetiibacter 10 1
genus Proteiniborus 457 3 9
genus Proteiniclasticum 3 1 4
genus Proteiniphilum 41 37 244 4 4 3
genus Proteinivorax 149 2 5
genus Proteocatella 362 2 3 4
genus Proteomonas 1
genus Proteromonas 1
genus Proteus 182 144 14 200 22 15 1 18 9 2 3 7 2
genus Proteus 5 46 1 2
genus Protofrankia 5
genus Provencibacterium 4 1
genus Providencia 306 258 260 23 22 1 1 2
genus Przondovirus 1
genus Pseudacidovorax 4
genus Pseudactinotalea 26 2
genus Pseudaeromonas 64
genus Pseudalgibacter 1 2
genus Pseudalkalibacillus 1 13 2
genus Pseudaminobacter 1 4
genus Pseudanabaena 27 4 2
genus Pseudarcicella 60 2 1
genus Pseudarcobacter 1
genus Pseudarthrobacter 252 1 1 1
genus Pseudazoarcus 32 2
genus Pseudemcibacter 1
genus Pseudescherichia 26 61 1
genus Pseudidiomarina 94 10 2
genus Pseudoalteromonas 93 266 1 5 1 2 1
genus Pseudobacter 126 2
genus Pseudobacteroides 2 7 9
genus Pseudobdellovibrio 26 3 1 1 1
genus Pseudobutyrivibrio 4510 991 782 269 11 23 6 2 13 1 7 6 2 3 1
genus Pseudochrobactrum 9 21 1 1 2
genus Pseudocitrobacter 2
genus Pseudoclavibacter 142 601 45 1 3 2 2
genus Pseudoclostridium 3969 29 248 4 5 3 6 3
genus Pseudocnuella 33 2 2
genus Pseudodesulfovibrio 174 117 262 1 5 1 2 1
genus Pseudoduganella 19 23 3 2 1
genus Pseudoflavitalea 1 4
genus Pseudoflavonifractor 1327 469 44 12 27 29 1 9 5 7 6 4 1 1
genus Pseudofrankia 13 1 2
genus Pseudofulvibacter 3
genus Pseudoglutamicibacter 2 10 2 1
genus Pseudogulbenkiania 36 1 1
genus Pseudogymnoascus 2 1
genus Pseudohalocynthiibacter 5
genus Pseudohongiella 13 5 2 1
genus Pseudokineococcus 59
genus Pseudolabrys 1 89 1 1
genus Pseudoleptotrichia 5 43 76 1 2
genus Pseudolysobacter 17 1 1
genus Pseudomaricurvus 6
genus Pseudomonas 1109 568 50 275 27 4 2 31 7 9 3 5 3 1 1
genus Pseudo-nitzschia 1
genus Pseudonocardia 141 46 221 1 5 1 1 2 1
genus Pseudooceanicola 5 1
genus Pseudopedobacter 268 96 2 1 2 2 2 2
genus Pseudophaeobacter 9
genus Pseudoprevotella 93 1 3
genus Pseudopropionibacterium 1 1 2 1 1
genus Pseudopuniceibacterium 1 1
genus Pseudoramibacter 1926 250 2 2 4
genus Pseudorhizobium 1
genus Pseudorhodobacter 125 5 1 1
genus Pseudorhodoferax 3
genus Pseudorhodoplanes 32 1 2
genus Pseudoroseomonas 1 1
genus Pseudoruminococcus 8 8 1
genus Pseudoscardovia 863 5
genus Pseudoscillatoria 518
genus Pseudostreptobacillus 1
genus Pseudosulfitobacter 16 2
genus Pseudotevenvirus 1
genus Pseudothauera 1
genus Pseudothermotoga 1 9 4 2
genus Pseudovibrio 2 63 1
genus Pseudovirgaria 1
genus Pseudoxanthobacter 5
genus Pseudoxanthomonas 30 55 2 136 4 1 2
genus Pseudozobellia 1
genus Pseudozyma 1 2
genus Psychrilyobacter 32
genus Psychrobacillus 7 39 2
genus Psychrobacter 2035 228 1 196 1 1 3 4 2 1
genus Psychroflexus 591 39 2 3 2 2
genus Psychroglaciecola 1
genus Psychromicrobium 23 1 1
genus Psychromonas 46 55 24 4 2 1
genus Psychroserpens 36 3
genus Psychrosinus 25
genus Psychrosphaera 2 1
genus Pterothamnion 1
genus Puccinia 1 1
genus Pukyongia 1 3
genus Pukyongiella 7 2
genus Pullulanibacillus 17 169
genus Pulveribacter 17
genus Pulvinaster 1
genus Punavirus 1 1
genus Punctularia 3 1
genus Puniceicoccus 451 192
genus Purpureocillium 2
genus Pusillibacter 2 3 3 1
genus Pusillimonas 2 124 2 2
genus Pustulibacterium 1
genus Pycnococcus 1
genus Pygmaiobacter 3
genus Pyramidobacter 78 47 43 5 3
genus Pyrenophora 1
genus Pyricularia 9 8
genus Pyrinomonas 44
genus Pyrobaculum 1
genus Pyrococcus 1
genus Pyruvatibacter 45 1
genus Pyxidicoccus 4
genus Qiania 2 3
genus Qingshengfaniella 2 1
genus Qipengyuania 282 1 15 2 2 1
genus Quadrisphaera 1
genus Quasibacillus 21
genus Quatrionicoccus 2
genus Qubevirus 30
genus Radiobacillus 20 2
genus Rahnella 10 214 1 2 1 1
genus Raineyella 54 2
genus Ralstonia 307 101 14 274 5 4 2 1 1 2
genus Ramlibacter 64 5 218 1 1 1 2
genus Ramularia 1
genus Raoultella 28 232 5 8 3 1 1 2
genus Raoultibacter 1 11 2 9 1 3
genus Raphidiopsis 1 3
genus Rapidithrix 9
genus Rarobacter 65
genus Rasamsonia 1
genus Rasiella 2 1
genus Rathayibacter 21 1 237 1 2
genus Ravinvirus 4
genus Reclinomonas 1
genus Rehaibacterium 2
genus Reichenbachiella 28
genus Reinekea 27 240 1 1 2
genus Renibacterium 5 6 1
genus Reyranella 5 1
genus Rhabdochromatium 22 1
genus Rhabdothermus 5
genus Rheinheimera 77 122 1 71 1 1
genus Rhizobacter 29 42 1 1
genus Rhizobium 39 45 5 271 1 4 5 1 2 1
genus Rhizochromulina 1
genus Rhizomicrobium 16
genus Rhizophagus 1 2
genus Rhizopus 2 1
genus Rhizorhabdus 27 1 11 1 2
genus Rhizorhapis 1
genus Rhodanobacter 12 83 43 2 3 2
genus Rhodella 1
genus Rhodobaca 6 11 1 1
genus Rhodobacter 139 4 1 254 1 4 1 1 2 1
genus Rhodobium 7
genus Rhodobium 7
genus Rhodoblastus 22
genus Rhodococcus 410 21 21 268 1 6 2
genus Rhodococcus 449 1 1
genus Rhodocyclus 12
genus Rhodocytophaga 39 50 1 1
genus Rhodoferax 359 4 254 1 1 2
genus Rhodoligotrophos 1
genus Rhodoluna 3 86 3
genus Rhodomicrobium 4 32 1 2
genus Rhodonellum 72
genus Rhodophyticola 2
genus Rhodopila 1
genus Rhodopirellula 1 1 2
genus Rhodoplanes 283 1 27 1 2 3 2
genus Rhodopseudomonas 40 2 244 1 4 1 2
genus Rhodospira 9 1 1
genus Rhodospirillum 2308 3 150 2 2 4 13 5 6 2
genus Rhodothalassium 72 18
genus Rhodothermus 4304 16 202 1 2 1 2 1
genus Rhodotorula 10 1
genus Rhodovastum 1 2
genus Rhodovibrio 950 38 3
genus Rhodovulum 13 71 1 93 4 2
genus Richelia 1
genus Rickettsia 2801 212 182 4 11 6 1
genus Rickettsiella 113 13 5 1 1
genus Riemerella 5 81 4 3
genus Rikenella 149 26 2 5 3 4
genus Rippkaea 2
genus Riquetophycus 1
genus Risungbinella 69
genus Rivibacter 1
genus Rivihabitans 12
genus Rivularia 291 1 1
genus Rivularia 291 1 2
genus Robbsia 4 11
genus Robertmurraya 2
genus Robiginitalea 6 81 1 2
genus Robiginitomaculum 10
genus Robinsoniella 1209 168 6 30 1 3 2 1
genus Rockefellervirus 2
genus Rodentibacter 181 19 70 1 1
genus Romboutsia 1228 520 271 39 2 10 20 9 12 1 8 4 2 1 1
genus Roseateles 1 5 71 1
genus Roseburia 4631 1533 784 279 44 35 32 32 31 23 14 11 7 6 4 4 3 2 1 1
genus Roseiarcus 5
genus Roseibacterium 3 1 1 1
genus Roseibium 1 1
genus Roseicitreum 2
genus Roseiflexus 21 169 1 2
genus Roseimarinus 34
genus Roseimaritima 9 2
genus Roseimicrobium 75 95 2 2
genus Roseitalea 15 1 1
genus Roseivirga 1 66 38
genus Roseivivax 3 4 71
genus Rosenbergiella 185
genus Roseobacter 3 92 3 1
genus Roseococcus 58 39 3 3
genus Roseomonas 329 19 1 170 4 1 2 1
genus Roseospira 940 9 2 5
genus Roseovarius 1 7 200 4 1
genus Rosistilla 2
genus Rossellomorea 16 1 61 1 2 2
genus Rothia 1059 597 134 132 6 22 21 3 1 2 1 2 2 1
genus Rothia 1085 11 167 2 1 1 3
genus Rotylenchulus 1
genus Rouxiella 28 2
genus Ruania 41 2
genus Rubellimicrobium 161 41 1
genus Rubidibacter 6 1
genus Rubidimonas 113
genus Rubinisphaera 4 2
genus Rubneribacter 1 1 1 1 1
genus Rubribacterium 1
genus Rubrimonas 6
genus Rubripirellula 2
genus Rubritalea 1638 211 8 1
genus Rubritepida 1
genus Rubrivivax 39 4 106 1 3 1 1
genus Rubrobacter 35 138 214 3 4 5 2
genus Rudaea 7
genus Rudanella 15
genus Ruegeria 12 2 105 1 1 1
genus Rufibacter 45 219 4 3 2
genus Ruficoccus 2
genus Rugamonas 1
genus Rugosibacter 3 2
genus Ruminiclostridium 3588 1528 32 246 7 34 7 5 1 19 4 2 3 1 1
genus Ruminobacter 76 82
genus Ruminococcus 4651 1540 2 280 56 35 32 32 31 23 14 1 7 6 4 3 3 2 1 1
genus Ruminofilibacter 1
genus Rummeliibacillus 22 88 30 1 2
genus Runella 1812 69 203 3 5 2
genus Ruoffia 82 128 2
genus Ruthenibacterium 1 274 15 30 8 31 2 11 4 3 1 1
genus Saccharibacillus 96 231 1 1 2
genus Saccharibacter 14
genus Saccharicrinis 55 1
genus Saccharina 1
genus Saccharobesus 1 1
genus Saccharofermentans 188 1 1 1
genus Saccharolobus 1
genus Saccharomonospora 23 343 65 2 2 2
genus Saccharomyces 112 12 8 1 5 3
genus Saccharomycopsis 1
genus Saccharophagus 1 1
genus Saccharopolyspora 1059 170 130 1 2 2 2 1
genus Saccharospirillum 104 14 30 1 2
genus Saccharothrix 6 72 1 1 1
genus Sagittula 38 1
genus Sakamotonia 4
genus Salaquimonas 22 1
genus Salarchaeum 1 1
genus Salegentibacter 3 55 4 2
genus Salibacterium 13
genus Salicibibacter 44 1 2
genus Salicola 5
genus Salidesulfovibrio 620 85 1 2
genus Salimicrobium 38 136 1 3 2 1
genus Salinactinospora 8
genus Salinadaptatus 6
genus Salinarchaeum 1 1
genus Salinibacillus 33
genus Salinibacter 2 104 1 1 2
genus Salinibacterium 28 76 2 1
genus Salinibaculum 1
genus Salinicoccus 2080 178 213 2 4 2 2 1
genus Salinicola 3 22 1
genus Salinifilum 18
genus Salinimicrobium 9 1 4 1
genus Salinimonas 1 136 5 1
genus Salininema 1
genus Saliniradius 6 1 2
genus Salinirubellus 2
genus Salinisphaera 31 20 1 2
genus Salinispira 89 4 2
genus Salinispirillum 361
genus Salinispora 2 5 50 1 1
genus Salinivenus 20
genus Salinivibrio 127 46 31 1 4
genus Salinivirga 98 1 2
genus Salipiger 28 3 1
genus Salisaeta 950 134 1 1
genus Salisediminibacterium 18 53 4 2
genus Salmo 1
genus Salmonella 425 34 4 275 30 18 2 30 1 8 2 2 2 1
genus Salpingoeca 1
genus Salsuginibacillus 4 1
genus Salvelinus 1
genus Sandaracinobacter 9
genus Sandaracinobacteroides 1
genus Sandaracinus 16 57 1 2
genus Sandinevirus 1
genus Sanguibacter 9 3 87 1 1 2
genus Sanguibacteroides 3
genus Saprochaete 2
genus Saprospira 18 1 1
genus Sarcina 2535 62 758 2 2 2 1 2 4 1 2
genus Savagea 4
genus Scandinavium 48 1
genus Scardovia 166 65 8 69 1 2
genus Scedosporium 1
genus Schaalia 2179 983 483 273 6 11 5 2 3 6 3 2 1
genus Schaedlerella 3 3 1
genus Scheffersomyces 8 6
genus Schinkia 1
genus Schistosoma 2
genus Schizocladia 1
genus Schizophyllum 1
genus Schizosaccharomyces 3 8 6
genus Schlegelella 199 5 2 1 1 2
genus Schleiferia 20
genus Schleiferilactobacillus 26 2 32 2
genus Schlesneria 1
genus Schnuerera 12 43 2 1
genus Schumannella 1
genus Schwartzia 23
genus Sclerogaster 1
genus Sclerotinia 1
genus Scopulibacillus 3 1
genus Scytonema 1 4
genus Sebaldella 125 3 161 1 4 1 1 2
genus Secundilactobacillus 21 107 42 2
genus Sedimentibacter 4577 348 2 4 2 23 1 7 2
genus Sedimenticola 12 45 3 2 1
genus Sedimentisphaera 89 1 4 2
genus Sedimentitalea 1
genus Sediminibacillus 15 2 1
genus Sediminibacterium 8 40 2 1 2
genus Sediminicoccus 1
genus Sediminicola 2 1
genus Sediminispirochaeta 25 86 1 2
genus Sediminitomix 102 2 1
genus Segatella 4387 1371 7 95 38 3 23 9 6 7 6 4 2 3 1 1
genus Segetibacter 615 46 1
genus Segniliparus 41 16 2 1 1
genus Seinonella 61
genus Selenihalanaerobacter 112 2
genus Selenomonas 4432 246 13 270 15 7 2 31 4 5 3 2 1
genus Sellimonas 3 4 2 1 7 3 1
genus Seminibacterium 13
genus Senegalia 1
genus Senegalimassilia 501 215 5 12 11 1 2
genus Senquatrovirus 1
genus Seohaeicola 3
genus Seonamhaeicola 3 2 1
genus Sepunavirus 7
genus Serinicoccus 79 21 173 1 3 1
genus Serpentinicella 1 1
genus Serpentinimonas 102 2 1
genus Serratia 3456 185 6 274 29 5 23 9 10 2
genus Sextaecvirus 2
genus Shackletoniella 16
genus Sharpea 2116 76 1 1 2 1
genus Shewanella 2999 185 272 26 29 15 5 2 1
genus Shigella 369 1 145 25 6 26 6 2 2 1
genus Shimazuella 15 3
genus Shimia 5 1
genus Shimwellia 33 1 1
genus Shinella 27 6 3 61 4 2 1
genus Shivajiella 5
genus Shouchella 52 5 23 1 4 2
genus Shuttleworthella 2499 1179 249 9 17 1 4 1 1
genus Shuzhengia 3
genus Siansivirga 1 4 3 1
genus Siccationidurans 8
genus Siccibacter 1
genus Siculibacillus 1
genus Sideroxyarcus 1
genus Sideroxydans 138 1
genus Silanimonas 37
genus Silene 2
genus Silicimonas 10 1 2
genus Silvibacterium 1
genus Simiaoa 2 3 3
genus Simiduia 21 6 1 2
genus Siminovitchia 1 2
genus Simkania 15 1 1 1
genus Simonsiella 6 3 1
genus Simplicispira 1 2 23 3 1 1
genus Sinanaerobacter 1
genus Singulisphaera 15 3 50 3 2
genus Sinibacillus 123 2
genus Sinimarinibacterium 85 1 1
genus Sinobaca 4
genus Sinobacterium 137
genus Sinomicrobium 2
genus Sinomonas 5 4 117 1 1
genus Sinorhizobium 8 1 249 9 13 2 1
genus Sinosporangium 19
genus Sinsheimervirus 17 22
genus Siphonobacter 30
genus Skermanella 2076 80 1 63 1 2
genus Skunavirus 56
genus Slackia 3955 969 250 263 13 18 6 3 24 4 4 1 7 2 2 1 1
genus Smithella 22 13
genus Sneathia 133 154 9 139 1 1 1 2
genus Sneathiella 10 1
genus Snodgrassella 1 59 1 1
genus Snowella 136
genus Sobemovirus 1
genus Sodaliphilus 95 1 2 3
genus Sodalis 28 173 3 4 2
genus Sodiomyces 1 1
genus Soehngenia 112 1 1
genus Solanum 3 1
genus Solibacillus 7 7 198 1 5 1 2
genus Solibaculum 2 3 3
genus Solidesulfovibrio 275 96 73 8 5 2
genus Solimonas 8 71 2 1
genus Solirubrobacter 34 28
genus Solitalea 35 65 2 1 2 2
genus Solobacterium 747 303 88 1 2 6 2 3
genus Sorangium 1 1 1 217 1 4 2
genus Sordaria 7 2
genus Sparassis 1
genus Spartinivicinus 1
genus Spathaspora 1
genus Spelaeicoccus 4
genus Sphaerimonospora 4
genus Sphaerisporangium 8
genus Sphaerobacter 3 95 2
genus Sphaerochaeta 8 3 239 1 1 1 2
genus Sphaerospermopsis 2 1
genus Sphaerotilus 2 43 2
genus Sphingobacterium 4465 207 1 270 5 1 5 4 4 1 7 3
genus Sphingobium 574 131 2 258 2 5 9 3 2 1
genus Sphingomicrobium 12
genus Sphingomonas 835 634 13 268 2 14 5 1 1 2 1
genus Sphingopyxis 53 33 2 248 1 2 1 2
genus Sphingorhabdus 14 210 1 1 1
genus Sphingosinicella 5 61 5 1
genus Sphingosinithalassobacter 11 1
genus Spinacia 1
genus Spiractinospora 2
genus Spiribacter 25 149 2 4 1 2
genus Spirilliplanes 2
genus Spirillospora 1
genus Spirillum 5 14
genus Spirochaeta 1 64 226 1 1 2 2
genus Spirometra 2
genus Spiroplasma 627 262 1 6 3 2
genus Spirosoma 8 9 267 1 5 2
genus Spirulina 9
genus Spongiibacter 1 6 1 2
genus Spongiimonas 1
genus Spongiispira 1
genus Spongitalea 2
genus Sporacetigenium 168 2
genus Sporanaerobacter 3 15 3 1 4 1
genus Sporichthya 22 15
genus Sporisorium 3 8 1
genus Sporobacter 1439 407 4 8 9 7 4
genus Sporobacterium 978 1 2 1 8 6 7
genus Sporobolomyces 1
genus Sporocytophaga 7 1
genus Sporofaciens 1
genus Sporohalobacter 54 1
genus Sporolactobacillus 1544 14 143 1 1 1 2 1
genus Sporomusa 424 204 1 1 4 2 1
genus Sporosalibacterium 120 2 1
genus Sporosarcina 764 1290 260 1 21 2 2 2 2
genus Sporothrix 3 1
genus Sporotomaculum 2117 281 7
genus Stackebrandtia 168 46 1 1
genus Stagonosporopsis 1
genus Stanieria 5 9 1 1
genus Staphylococcus 1553 259 206 275 30 2 3 32 13 6 4 2 1 3 1 1
genus Staphylospora 151 2 2
genus Staphylothermus 1
genus Stappia 70 1 1
genus Starkeya 90 2
genus Starria 116 3
genus Stella 292 195 1 2
genus Stenotrophomonas 548 53 16 271 1 4 3 4 1 2 2 1
genus Stenoxybacter 44 1 1
genus Stereum 2 1
genus Steroidobacter 40 40 62 2
genus Sterolibacterium 25 15 22
genus Stieleria 3
genus Stigmatella 17 87 1 2
genus Stomatobaculum 706 8 2 3 4 1
genus Storeatula 1
genus Stratiformator 1
genus Streptacidiphilus 163 193 1 1 2 1
genus Streptantibioticus 2 2 2
genus Streptobacillus 24 78 1 126 1 3 2 1 1
genus Streptococcus 4612 1531 765 278 51 35 31 32 31 23 13 9 7 6 4 4 3 2 1 1
genus Streptohalobacillus 9
genus Streptomonospora 443 36 1 2 1
genus Streptomyces 488 329 275 10 2 32 2 1 4 2 1 1
genus Streptosporangium 58 15 141 1 1 2
genus Strigomonas 1
genus Strongyloides 2
genus Stutzerimonas 49 44 68 1 5 2
genus Subdoligranulum 1505 776 1 12 19 31 2 9 22 1 7 3 3 1
genus Subsaximicrobium 1
genus Succinatimonas 75 5 1
genus Succiniclasticum 177 489 34 4 4 2 1 1
genus Succinimonas 78
genus Succinispira 175 2 4
genus Succinivibrio 1375 131 9 192 9 19 3 2 2
genus Sugiyamaella 8 1
genus Suicoccus 110 2 2
genus Suillus 1 1
genus Sukhumvitvirus 1
genus Sulfidibacter 1
genus Sulfitobacter 3 245 1 4 1 2 1 1
genus Sulfobacillus 127 96 14 1 4 2
genus Sulfodiicoccus 2
genus Sulfolobus 2
genus Sulfuricaulis 69 3 1
genus Sulfuricella 25 1 1
genus Sulfuricurvum 10 9 43 4
genus Sulfuricystis 25 4
genus Sulfuriferula 4 175 1 2
genus Sulfuriflexus 30 1 1
genus Sulfurifustis 6 29 1 2
genus Sulfurihydrogenibium 22 1 2
genus Sulfurimicrobium 72
genus Sulfurimonas 8 8 136 1 2 2
genus Sulfuriroseicoccus 2
genus Sulfurisoma 5
genus Sulfuritalea 5 28 1 1
genus Sulfuritortus 64 1
genus Sulfurivermis 137 3 1
genus Sulfurivirga 37
genus Sulfurospirillum 45 4 204 5 5 2
genus Sulfurovum 2 90 1 2
genus Suncus 2
genus Sungkyunkwania 1
genus Sunxiuqinia 98
genus Suspvirus 1
genus Sutcliffiella 3 23 3 2
genus Sutterella 4576 1266 520 263 26 28 14 4 27 14 15 3 7 6 4 4 2 2 1
genus Suttonella 38 1
genus Swaminathania 1
genus Swingsia 17
genus Symbiobacterium 3061 22 222 3 4 1 2
genus Symbiochloris 1
genus Symbiopectobacterium 1
genus Symmachiella 2
genus Symploca 70
genus Synarthrophyton 1
genus Synchytrium 9 1
genus Synechococcus 6 266 1 6 2
genus Synechocystis 27
genus Synergistes 149 13 15 1 1
genus Syntrophaceticus 66
genus Syntrophobacter 34 13 145 1 1
genus Syntrophobacterium 2
genus Syntrophobotulus 17 179 1 1 2
genus Syntrophococcus 910 31 23 4 11 4 7
genus Syntrophomonas 1279 688 3 93 3 1 2 2
genus Syntrophorhabdus 30
genus Syntrophotalea 59 4 56 2 2
genus Syntrophothermus 58 4 1 2
genus Syntrophus 2 40 27 4 2
genus Syntrophus 13
genus Synura 1
genus Tabrizicola 8
genus Tahibacter 1 1
genus Taibaiella 63
genus Talaromyces 25 8 1
genus Tamilnaduibacter 21
genus Tamlana 4 5 1 1 1
genus Tangfeifania 16
genus Tannerella 22 490 2 270 11 12 29 3 3 3 1
genus Tannockella 2 3
genus Tanticharoenia 6 1
genus Taonella 3
genus Taphrina 1
genus Tapinothrix 18
genus Taranisvirus 145
genus Tardibacter 22 1
genus Tardiphaga 1 32
genus Tateyamaria 3 1
genus Tatlockia 9 1
genus Tatumella 13 182 1 1 2
genus Tautonia 29
genus Taylorella 11 34 1 2 1
genus Telluria 2 1
genus Tellurirhabdus 1
genus Telmatocola 1 2
genus Telmatospirillum 154 46
genus Temperatibacter 1
genus Tenacibaculum 161 5 210 1 4 2 2 1
genus Tenuibacillus 21
genus Tenuifilum 118 2
genus Tepidamorphus 3
genus Tepidanaerobacter 1708 23 94 1 1 2 2
genus Tepidibacillus 110
genus Tepidibacter 1167 132 1 12 1 2 1
genus Tepidiforma 62 2
genus Tepidimicrobium 99 484 3
genus Tepidimonas 96 36 11 1 1 2
genus Tepidiphilus 1 2
genus Tepiditoga 2
genus Tequintavirus 2
genus Terasakiella 9 38 1 2
genus Terasakiispira 5
genus Teredinibacter 7 1 1 2
genus Terrabacter 4
genus Terracoccus 6
genus Terrahaemophilus 1
genus Terribacillus 21 32 154 1 3 2
genus Terricaulis 55 1
genus Terriglobus 1 9 226 1 4 2 1
genus Terrihabitans 2 2
genus Terrimicrobium 6
genus Terrimonas 19
genus Terrisporobacter 1286 604 80 3 6 14 2 4 1 3 3 1
genus Tessaracoccus 330 22 243 1 2 1 2
genus Testudinibacter 1
genus Tetragenococcus 2770 242 2 197 10 19 1 3 2
genus Tetrapisispora 9 1
genus Texcoconibacillus 128 2
genus Thalassiosira 1
genus Thalassobacillus 3
genus Thalassobaculum 4
genus Thalassococcus 4 3 1
genus Thalassocola 3
genus Thalassolituus 4 2 1 1
genus Thalassomonas 3 14 1 1 1
genus Thalassospira 1155 19 359 187 1 8 2 1
genus Thalassotalea 73 60 1 2 2
genus Thalassovita 10 11 1
genus Thauera 622 87 250 1 5 3 1 1
genus Thaumasiovibrio 1
genus Theileria 4
genus Theobroma 1
genus Thermacetogenium 13 19 115 1 1 2
genus Thermaerobacter 83 249 1 6 2 2
genus Thermanaeromonas 2 4 3
genus Thermanaerosceptrum 2 2
genus Thermanaerothrix 3 1
genus Thermanaerovibrio 6 84 1 2
genus Thermasporomyces 46
genus Thermicanus 3945 822 3 20 7
genus Thermincola 88 1 155 1 4 3 2
genus Thermoactinomyces 18 336 42 3 2
genus Thermoanaerobacter 1255 40 242 1 5 3 2 2
genus Thermoanaerobacterium 819 8 260 20 27 2
genus Thermoanaerobaculum 96
genus Thermobacillus 85 18 220 1 1 2
genus Thermobaculum 791 239 2 1 2
genus Thermobifida 53 1 2
genus Thermobispora 18 23 1 1
genus Thermobrachium 2
genus Thermocaproicibacter 1
genus Thermochaetoides 1
genus Thermochromatium 13 1
genus Thermoclostridium 2887 410 245 1 5 9 5 3 1
genus Thermococcus 10 104 6 1 2
genus Thermocoleostomius 2
genus Thermocrinis 29 1 2
genus Thermodesulfatator 460 2 1 2 2
genus Thermodesulfobacterium 10 2 2
genus Thermodesulfobium 32 20 2 1 2 1 2
genus Thermodesulfomicrobium 165 1
genus Thermodesulforhabdus 26
genus Thermodesulfovibrio 1086 27 17 3 2 6 2
genus Thermofilum 2
genus Thermoflexibacter 110
genus Thermoflexus 4
genus Thermogemmatispora 440 5 65 3 3
genus Thermogladius 1
genus Thermogutta 39 4 1 1
genus Thermogymnomonas 21
genus Thermohalobacter 52
genus Thermohydrogenium 43
genus Thermoleophilum 104 1 1
genus Thermoleptolyngbya 9 1
genus Thermolithobacter 71
genus Thermolongibacillus 106
genus Thermomarinilinea 53
genus Thermomicrobium 5 6 1 2
genus Thermomonas 21 4 46 1 2
genus Thermomonospora 5 86 4 2
genus Thermonema 59 2
genus Thermophagus 108
genus Thermophilibacter 2
genus Thermoplasma 1
genus Thermopolyspora 6
genus Thermoproteus 1 1
genus Thermorudis 10
genus Thermosediminibacter 34 105 1 3 2
genus Thermosinus 10
genus Thermosipho 8 25
genus Thermosipho 7 2 79 1 2 2 1
genus Thermosphaera 1
genus Thermospira 2
genus Thermosporothrix 21 9
genus Thermostaphylospora 5
genus Thermosulfidibacter 4 1
genus Thermosulfurimonas 20 2
genus Thermosulfuriphilus 1 2
genus Thermosynechococcus 38 2 1
genus Thermosyntropha 5
genus Thermotalea 1
genus Thermothelomyces 2 8
genus Thermothielavioides 1 9
genus Thermotoga 138 1 2 2
genus Thermotomaculum 16 1 2
genus Thermovenabulum 294 30 6
genus Thermovibrio 16 3 1 2 1
genus Thermovirga 3 3 2
genus Thermovorax 1
genus Thermus 500 39 234 1 4 1 5 2
genus Thioalbus 2
genus Thioalkalicoccus 5
genus Thioalkalispira 9
genus Thioalkalivibrio 725 47 236 1 5 2 2 1
genus Thiobacillus 850 57 1 150 2 1 1 2
genus Thiobacter 22 2
genus Thiocapsa 1289 134 9 3 2
genus Thioclava 4 13 1 1
genus Thiococcus 2
genus Thiocystis 23 106 58 3 2
genus Thiodictyon 152 2 2
genus Thiofaba 3
genus Thiofilum 5
genus Thioflavicoccus 96 1 2
genus Thiohalobacter 162 70 1 1
genus Thiohalocapsa 112 1
genus Thiohalomonas 9
genus Thiohalophilus 1
genus Thiohalorhabdus 2290 205 2 1
genus Thiohalospira 13
genus Thiolamprovum 354
genus Thiolapillus 28 1 1
genus Thiolinea 2
genus Thiomicrorhabdus 1 1 198 1 2 1
genus Thiomicrospira 571 109 1 23 1 1 1
genus Thiomonas 1285 276 1 194 1 4 1 2 1
genus Thiophaeococcus 17
genus Thioploca 27
genus Thioprofundum 10
genus Thiopseudomonas 6 2
genus Thioreductor 4
genus Thiorhodococcus 973 16 3 1
genus Thiorhodospira 90 5 1
genus Thiorhodovibrio 87
genus Thiospirochaeta 1 6 1 2
genus Thiosulfativibrio 2
genus Thiothrix 3283 114 1 80 20 2 2 2
genus Thiovirga 3 94
genus Thomasclavelia 1526 482 97 25 26 27 28 9 8 7 2 3 3 2 1 1
genus Thorsellia 79
genus Thyridium 1
genus Tichowtungia 45 2
genus Tidjanibacter 3 2
genus Tilletiaria 1
genus Tilletiopsis 2 1
genus Tindallia 4048 172 1 11 2
genus Tissierella 112 241 20 25 3 2
genus Tistlia 1 1
genus Tistrella 98 78 2 1
genus Tolumonas 1168 4 72 1 2 2
genus Tolypothrix 1
genus Tomitella 26 40
genus Tonsilliphilus 9
genus Toutatisvirus 141 1 1
genus Toxoplasma 5 1
genus Trabulsiella 880 1 4 2 1 2 1
genus Trachelomonas 1
genus Tractidigestivibacter 190 3 1
genus Trametes 10 1
genus Tranquillimonas 1
genus Traorella 1 4
genus Traversvirus 1
genus Trebouxia 1 1
genus Treponema 1107 88 271 25 25 4 1 3 1
genus Trichlorobacter 64 1 5 2
genus Trichococcus 474 33 2 1 1
genus Trichocoleus 3
genus Trichoderma 61 2
genus Trichodesmium 434 1 3 1
genus Trichomonas 1
genus Trichormus 1 2 1 1
genus Trichosporon 60
genus Trichostrongylus 1
genus Trieres 1
genus Trinickia 6 15 1 2
genus Tritonibacter 2
genus Tropheryma 84 1
genus Truepera 24 78 2
genus Trueperella 60 24 6 256 1 6 2 2 2 2 1
genus Tryblionella 1
genus Trypanosoma 1
genus Tsukamurella 276 8 137 4 1 2
genus Tsunamia 1
genus Tsuneonella 16 4 1 1
genus Tuberibacillus 27 1
genus Tulasnella 1
genus Tumebacillus 70 233 1 2 2
genus Tunicatimonas 72
genus Turicella 18 8
genus Turicibacter 3007 968 473 272 14 8 14 6 15 3 9 2 5 4 2 1
genus Turicimonas 1 3
genus Turneriella 18 4 2 1 2
genus Tuwongella 2 2
genus Tychonema 438 1
genus Tyzzerella 1531 226 10 33 27 5 9 17 3 2 1
genus Uliginosibacterium 552 113 1 3
genus Ulva 1
genus Umboniibacter 1
genus Umezawaea 1
genus Uncinocarpus 1 1
genus Undibacterium 38 4 125 3 2 1
genus Urbifossiella 1
genus Ureaplasma 123 49 10 76 3 2 1
genus Urechidicola 2 4 1
genus Ureibacillus 129 101 193 1 1 2
genus Urmitella 2 2
genus Uronema 1
genus Ursidibacter 77
genus Uruburuella 2 2
genus Usitatibacter 13 1
genus Usta 3
genus Ustilaginoidea 1
genus Ustilago 2 1
genus Vaginimicrobium 87 2
genus Vagococcus 1484 64 5 257 1 6 2
genus Vallitalea 135 3 3 2 9 3
genus Vampirococcus 13 1
genus Vampirovibrio 67 1 3
genus Vanrija 1
genus Varibaculum 704 398 260 62 5 5 4 2 3 2
genus Variibacter 2 19 3 1
genus Variovorax 79 15 266 1 1 5 3 2 1
genus Varunaivibrio 2
genus Veillonella 4542 1282 534 274 21 22 24 27 12 2 7 6 7 6 2 3 2 1
genus Venatoribacter 2
genus Ventrimonas 4
genus Venustampulla 1
genus Vequintavirus 4
genus Verminephrobacter 45 25 2 1 1
genus Verrucomicrobium 122 115 2 1
genus Verrucosispora 6 3 10 1
genus Verticiella 1
genus Verticillium 3 1
genus Vescimonas 2 4 3 1
genus Vespertiliibacter 3 5
genus Vibrio 214 72 272 1 5 1 2 3
genus Victivallis 392 282 1 5 6 3 4 1 4 3 1
genus Virgibacillus 339 54 1 264 1 5 2 1
genus Virgisporangium 2
genus Viridibacillus 858 25 2 2
genus Vitreoscilla 1 29 49 1 1 2
genus Vogesella 202 29 61 1 2
genus Volucribacter 69 24
genus Volvox 1
genus Vulcanibacillus 19 1
genus Vulcaniibacterium 10 2
genus Vulcanisaeta 1 2
genus Vulcanithermus 18
genus Vulgatibacter 100 2
genus Waddlia 33 1 1 1 2
genus Wadgaonvirus 1
genus Wallemia 1
genus Waltera 6 3 1
genus Wansuia 2 3 3
genus Warwickvirus 3
genus Wautersiella 6
genus Webervirus 4
genus Weeksella 7 7 1 2
genus Weissella 2614 995 31 260 9 4 1 17 12 3 2 2 1
genus Weizmannia 85 1 47 1 3 1 1 2
genus Wenyingzhuangia 11 8 3 2
genus Wenzhouxiangella 59 20 1 1 1 1
genus Westerdykella 1
genus Wickerhamomyces 1
genus Wielerella 2
genus Wigglesworthia 5
genus Williamsia 4 4
genus Williamsoniiplasma 6 8 1
genus Wilmottia 37
genus Winkia 154 322 5 1 1
genus Winogradskyella 5 8 206 1 5 2 1
genus Woeseia 3 1 1
genus Wohlfahrtiimonas 2 3 2
genus Wolbachia 2 76 1 4 1
genus Wolinella 1 2
genus Woronichinia 1
genus Wujia 2 1 3
genus Xanthobacter 14 10 91 1 1
genus Xanthomonas 200 44 268 1 5 1 2 1
genus Xaviernesmea 1
genus Xenophilus 25 1 1
genus Xenorhabdus 252 222 9 14 2 1
genus Xiamenia 2 2
genus Xylanimicrobium 5 1 1
genus Xylanimonas 56 1 4 2
genus Xylella 4 1 4 3 1
genus Xylophilus 4 83 1
genus Yangia 4 4 2
genus Yaniella 51 5
genus Yanshouia 2
genus Yarrowia 3 8 8
genus Yeguia 4
genus Yeosuana 1
genus Yersinia 2
genus Yersinia 455 30 4 269 1 2 4 1 2
genus Yimella 3 1
genus Yinghuangia 2
genus Yokenella 42 4 8 2
genus Yonghaparkia 6
genus Yoonia 8 12 1
genus Youhaiella 1
genus Youngiibacter 220
genus Youngimonas 32
genus Youxingia 3
genus Yunnanensis 1
genus Zavarzinella 2
genus Zeaxanthinibacter 2
genus Zhaonella 2
genus Zhenpiania 1
genus Zhihengliuella 18 16 3 1
genus Zhongshania 46 1 1
genus Zhouia 8 2
genus Zobellella 112 189 1 3 2
genus Zobellia 36 2 20 1 3 4 1
genus Zoogloea 24 18 1 2
genus Zooshikella 4
genus Zophobihabitans 6 2
genus Zunongwangia 19 2 2
genus Zygosaccharomyces 8
genus Zymobacter 73 10
genus Zymomonas 1 1 133 8 11 2
genus Zymoseptoria 8
infraclass Neognathae 14 13
infraclass Neoptera 537 7 11 2 1 4 22 1
infraclass Teleostei 5
infraorder Anareolatae 1
infraorder Aphidomorpha 7 22
infraorder Areolatae 7 6 2 1 1
infraorder Cicadomorpha 1
infraorder Cucujiformia 2
infraorder Neolepidoptera 20
infraorder Panagrolaimomorpha 2
infraorder Pecora 1
infraorder Rhabditomorpha 1
infraorder Simiiformes 15 1 1
infraorder Spiruromorpha 1
infraorder Staphyliniformia 3 8
infraorder Tettigoniidea 1
infraorder Tylenchomorpha 1
isolate Albugo laibachii Nc14 1
isolate Bacteroides timonensis AP1 9
isolate Candidatus Arthromitus sp. SFB-mouse-Japan 1
isolate Candidatus Atelocyanobacterium thalassa isolate ALOHA 1
isolate Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 11 3
isolate Candidatus Carsonella ruddii CE isolate Thao2000 1
isolate Candidatus Carsonella ruddii HC isolate Thao2000 1
isolate Candidatus Carsonella ruddii HT isolate Thao2000 1
isolate Candidatus Carsonella ruddii PC isolate NHV 1
isolate Candidatus Koribacter versatilis Ellin345 16 1
isolate Candidatus Solibacter usitatus Ellin6076 1
isolate Cardinium endosymbiont cEper1 of Encarsia pergandiella 1
isolate Chlamydia caviae GPIC 1
isolate Trichomonas vaginalis G3 1
kingdom Bamfordvirae 3 1
kingdom Fungi 96 14 12 2 10 2 6 3 3 1
kingdom Heunggongvirae 33 10 12 4 1
kingdom Loebvirae 2 12
kingdom Metazoa 1238 8 11 33 1 1 6 22 1
kingdom Mobiluncus/Falcivibrio group 47
kingdom Orthornavirae 8 1 1
kingdom Pararnavirae 2
kingdom Sangervirae 23 9 22 7
kingdom Shotokuvirae 5 1 1
kingdom Viridiplantae 736 11 18 15 2 3 25 1 3 2
MXU569 Anaerococcus marasmi 3
no rank Acidobacteriota incertae sedis 31
no rank Actinomycetes incertae sedis 215 2 1
no rank Agaricomycetes incertae sedis 16 1 1
no rank Aleutian mink disease parvovirus (STRAIN G) 1
no rank Alphaproteobacteria incertae sedis 5 20 3 1
no rank Alteromonadales genera incertae sedis 1
no rank Alteromonas/Salinimonas group 3 42 88 1 5 2
no rank Altibacter/Constantimarinum group 3 1
no rank Aneurinibacillus group 273 200 1 84 1 3 2
no rank Anthribidae incertae sedis 2
no rank Aquificales genera incertae sedis 4 1
no rank artificial sequences 1
no rank Bacillales Family XII. Incertae Sedis 76 59 3 93 1 6 3 2
no rank Bacillales incertae sedis 4634 1198 179 94 6 6 17 6 26 1 7 2 1
no rank Bacilli incertae sedis 1
no rank Bacillota sensu stricto incertae sedis 657 92 8 26 13 1 9 3 4 2 2
no rank Bacillus thuringiensis serovar andalousiensis 1
no rank Bacillus thuringiensis serovar chinensis 1
no rank Bacillus thuringiensis serovar coreanensis 1
no rank Bacillus thuringiensis serovar huazhongensis 1
no rank Bacillus thuringiensis serovar pulsiensis 1
no rank Bacteria incertae sedis 12 201 90 7 19 4 1 2 2 1
no rank Bacteroidales incertae sedis 317 179 3 51 4 1 1 1
no rank Bacteroides phage crAss001 12
no rank Bacteroidetes incertae sedis 13 1 2
no rank Betaproteobacteria incertae sedis 22 20 1 81 1 5 2
no rank Brucella/Ochrobactrum group 479 7 24 88 1 5 1 1 1
no rank Burkholderiales genera incertae sedis 1639 401 18 70 4 8 3 1 4 2 1
no rank Calidifontibacillus/Schinkia group 1
no rank Calonectria kyotensis species complex 1
no rank Campylobacter sputorum subsp. sputorum 1
no rank Campylobacterales incertae sedis 3
no rank Campylobacterota incertae sedis 6 3
no rank Candidatus Pelagibacterales incertae sedis 1
no rank Candidatus Phytoplasma incertae sedis 60
no rank cellular organisms 4653 1543 790 110 76 35 32 32 31 28 15 11 7 6 4 3 3 2 1 1
no rank Cercopithecine betaherpesvirus 5 1
no rank Chlamydia/Chlamydophila group 1 3 43 1 1 2 1 1
no rank Chlorobium/Pelodictyon group 8 81 1 1 2
no rank Chloroflexota incertae sedis 785 239 2 1 2
no rank Chlorophyceae incertae sedis 1
no rank Christensenellaceae incertae sedis 2
no rank Chromatiales incertae sedis 146 10 1
no rank Chromobacterium group 215 27 52 9 10 1 2
no rank Chryseobacterium group 283 43 2 98 1 5 1 1 6 2 1
no rank Chytridiomycota incertae sedis 1 1
no rank Clostridia incertae sedis 1 3
no rank Clostridiaceae incertae sedis 1
no rank Clostridium botulinum A 3
no rank Clostridium botulinum B 1 15 1 5
no rank Clostridium botulinum B1 str. Okra 3
no rank Clostridium botulinum F 1
no rank Clostridium perfringens A 1
no rank Clostridium saccharoperbutylacetonicum N1-4(HMT) 3
no rank Clupeocephala 6
no rank Colletotrichum boninense species complex 1
no rank Colletotrichum destructivum species complex 1
no rank Coriobacteriaceae incertae sedis 1
no rank Coriobacteriia incertae sedis 2
no rank Corynebacteriales incertae sedis 28 20 1
no rank Cyanobacteriota incertae sedis 1
no rank Cytophagales incertae sedis 90 1 4
no rank Deltaproteobacteria incertae sedis 46 1 1 1 2
no rank Dothideomycetes incertae sedis 1 1 1
no rank Enterobacter phage phiT5282H 1
no rank Enterobacterales incertae sedis 12 3 1 1
no rank Enterobacteria phage SP 205
no rank Enterobacteriaceae incertae sedis 1168 1 10 1 4 2 6 2
no rank Entylomatales incertae sedis 1
no rank environmental samples 8 1
no rank environmental samples 34 2
no rank environmental samples 2
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 59 1 2
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 1 3
no rank environmental samples 1 1
no rank environmental samples 1
no rank environmental samples 9
no rank environmental samples 4 1 3
no rank environmental samples 15 1 3
no rank environmental samples 1
no rank environmental samples 1 3
no rank environmental samples 41 2
no rank environmental samples 2
no rank environmental samples 3 1
no rank environmental samples 3
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 17
no rank environmental samples 2
no rank environmental samples 14 3
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 6 1 2
no rank environmental samples 3
no rank environmental samples 24 4 8 3
no rank environmental samples 33 1 12
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 15 1 3
no rank environmental samples 1 3
no rank environmental samples 2 2
no rank environmental samples 4
no rank environmental samples 1
no rank environmental samples 3 1
no rank environmental samples 16 1 7 1 1 1 3
no rank environmental samples 38
no rank environmental samples 2
no rank environmental samples 31 1 1 3
no rank environmental samples 32 1 1 1 3
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 3
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 11 2
no rank environmental samples 3
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 1 2
no rank environmental samples 2
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 12
no rank environmental samples 11 1 3
no rank environmental samples 1 49 3 19 2 1 3
no rank environmental samples 5 1 3
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 1
no rank environmental samples 1 2
no rank environmental samples 1
no rank environmental samples 29 1 3
no rank environmental samples 3
no rank environmental samples 1 1 2
no rank environmental samples 86 4 18 3
no rank environmental samples 16 1
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 1 3
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 2
no rank environmental samples 1
no rank environmental samples 4
no rank environmental samples 92 1 1 3
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 2 1
no rank environmental samples 2 1 2
no rank environmental samples 24 3
no rank environmental samples 19
no rank environmental samples 2
no rank environmental samples 20 1 3
no rank environmental samples 1
no rank environmental samples 28 1 1 3
no rank environmental samples 6
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 2 1
no rank environmental samples 1 103 4 1 3
no rank environmental samples 2
no rank environmental samples 11 1 1 3
no rank environmental samples 2
no rank environmental samples 2
no rank environmental samples 1 3
no rank environmental samples 1 3
no rank environmental samples 1
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 3
no rank environmental samples 4 1 3
no rank environmental samples 2
no rank environmental samples 1 3
no rank environmental samples 1 2 1 1 2
no rank environmental samples 1
no rank environmental samples 6
no rank environmental samples 1 30 1 3
no rank environmental samples 10
no rank environmental samples 23
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 3
no rank environmental samples 3
no rank environmental samples 80 1
no rank environmental samples 3
no rank environmental samples 3
no rank environmental samples 1 1 3
no rank environmental samples 3 1 3
no rank environmental samples 1 1
no rank environmental samples 2
no rank environmental samples 70 1 3
no rank environmental samples 1 3
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 17 1 3
no rank environmental samples 1
no rank environmental samples 1 2
no rank environmental samples 86 2
no rank environmental samples 10 1 1 3
no rank environmental samples 2
no rank environmental samples 2
no rank environmental samples 1
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 21
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 2
no rank environmental samples 2
no rank environmental samples 2 1
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 1 1
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 17 2
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 1
no rank environmental samples 1 3
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 1 1
no rank environmental samples 2
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 1
no rank environmental samples 2
no rank environmental samples 2
no rank environmental samples 1 2
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 1
no rank environmental samples 23 1 1 1 2
no rank environmental samples 1
no rank environmental samples 1
no rank environmental samples 1
no rank environmental samples 3
no rank environmental samples 3
no rank environmental samples 3
no rank environmental samples 2
no rank environmental samples 1
no rank Erysipelotrichaceae incertae sedis 14 6 1 3
no rank Erythrobacter/Porphyrobacter group 290 31 1 93 1 2 1 1 1
no rank Escherichia coli 3.4880 3
no rank Escherichia coli 7.1982 3
no rank Escherichia coli 95.0083 3
no rank Escherichia coli ATCC 700728 3
no rank Escherichia coli BW25113 3
no rank Escherichia coli BW2952 4 3
no rank Escherichia coli E22 3
no rank Escherichia coli ER2796 3
no rank Escherichia coli O103:H2 str. 12009 3
no rank Escherichia coli O103:H2 str. 2009C-3279 3
no rank Escherichia coli O103:H2 str. 2010C-4433 3
no rank Escherichia coli O103:H2 str. 2011C-3750 3
no rank Escherichia coli O103:H2 str. CVM9450 3
no rank Escherichia coli O121 str. RM8352 3
no rank Escherichia coli O127:H27 str. C43/90 3
no rank Escherichia coli O127:H6 str. E2348/69 substr. CVDNalr 3
no rank Escherichia coli O127:H6 str. E2348/69 substr. UMD753 3
no rank Escherichia coli O139:H1 3
no rank Escherichia coli O141:H4 3
no rank Escherichia coli O145:H34 3
no rank Escherichia coli O15:H12 3
no rank Escherichia coli O157 str. NCCP15738 3
no rank Escherichia coli O157 str. NCCP15739 3
no rank Escherichia coli O157 typing phage 4 4
no rank Escherichia coli O157: str. 2010EL-2044 3
no rank Escherichia coli O157: str. 2010EL-2045 3
no rank Escherichia coli O157:H16 str. 98-3133 3
no rank Escherichia coli O158:H23 3
no rank Escherichia coli O16:H48 3
no rank Escherichia coli O169:H41 str. F9792 3
no rank Escherichia coli O170:H18 3
no rank Escherichia coli O18ac:H14 3
no rank Escherichia coli O19:H7 3
no rank Escherichia coli O20:H12 3
no rank Escherichia coli O25:H16 3
no rank Escherichia coli O25b:H4-ST131 3
no rank Escherichia coli O26:NM str. 2010C-4347 3
no rank Escherichia coli O26:NM str. 2010C-4788 3
no rank Escherichia coli O43 str. RM10042 1 3
no rank Escherichia coli O55:H7 1 2 3
no rank Escherichia coli O68:H12 3
no rank Escherichia coli O7:H15 3
no rank Escherichia coli O80:H26 8 3
no rank Escherichia coli O84:H7 3
no rank Escherichia coli O85:H1 3
no rank Escherichia coli O91:H21 str. 2009C-3740 3
no rank Escherichia coli O91:H21 str. 2009C-4646 3
no rank Escherichia coli O91:H21 str. B2F1 3
no rank Escherichia coli PA11 3
no rank Escherichia coli PA13 3
no rank Escherichia coli PA19 3
no rank Escherichia coli PA35 3
no rank Escherichia coli STEC O174:H46 str. I-151 3
no rank Escherichia coli str. K-12 substr. DH10B 3
no rank Escherichia coli str. K-12 substr. MC4100 3
no rank Escherichia coli str. K-12 substr. MDS42 3
no rank Escherichia coli str. K-12 substr. MG1655 9 1 3
no rank Escherichia coli str. K-12 substr. MG1655star 3
no rank Escherichia coli str. K-12 substr. W3110 3
no rank Escherichia phage EdH4 4
no rank Escherichia phage fp01 1
no rank Escherichia phage ime 1
no rank Escherichia phage isim 4
no rank Escherichia phage LL12 4
no rank Escherichia phage Mu 6
no rank Escherichia phage naam 4
no rank Escherichia phage naswa 1
no rank Escherichia phage nimi 1
no rank Escherichia phage nomine 4
no rank Escherichia phage nomo 4
no rank Escherichia phage pangalan 1
no rank Escherichia phage PDX 4
no rank Escherichia phage phiAPCEc03 1
no rank Escherichia phage phiX174 3 22
no rank Escherichia phage pinkbiff 1
no rank Escherichia phage SP15 1
no rank Escherichia phage tiwna 3
no rank Eubacteriales incertae sedis 4227 1542 766 97 37 34 32 19 28 10 10 11 7 3 3 3 1 1 1
no rank Eukaryota incertae sedis 1
no rank Euryarchaeota incertae sedis 6
no rank Flavobacteriales incertae sedis 42 1 5 1 2
no rank Frankiales incertae sedis 1
no rank Fungi incertae sedis 15 10 2
no rank Gammaproteobacteria incertae sedis 3586 389 1 23 3 4 2 2 2 1
no rank Goose parvovirus 1
no rank Halanaerobiales incertae sedis 60 1 4 4 2
no rank Halothece cluster 1
no rank Heterobasidion annosum species complex 1
no rank human gammaherpesvirus 4 41
no rank Human polyomavirus 6 1
no rank Hyphomicrobiales incertae sedis 55 5 19 1 2
no rank Influenza A virus 1
no rank Klebsiella phage 13 2
no rank Klebsiella phage JY917 2
no rank Klebsiella phage KL 1
no rank Klebsiella phage KP1801 2
no rank Klebsiella phage KpCHEMY26 1
no rank Klebsiella phage KPV15 1
no rank Klebsiella phage Mineola 1
no rank Klebsiella phage NJS3 1
no rank Klebsiella phage PhiKpNIH-10 2
no rank Klebsiella phage PhiKpNIH-2 1
no rank Klebsiella phage Pylas 1
no rank Klebsiella phage Shelby 1
no rank Klebsiella phage Sin4 2
no rank Klebsiella phage Skenny 1
no rank Klebsiella phage ST13-OXA48phi12.1 2
no rank Klebsiella phage Sweeny 1
no rank Klebsiella/Raoultella group 1434 93 155 98 32 7 13 31 17 20 9 3 5 6 2 2 1 1
no rank Lachnospiraceae incertae sedis 1 3
no rank Lactobacillales incertae sedis 48
no rank Lactobacillus phage Lc-Nu 1
no rank Lactobacillus phage LJ 2
no rank Lactococcus lactis subsp. lactis bv. diacetylactis 2 2
no rank Lactococcus phage 05802 1
no rank Lactococcus phage 16802 2
no rank Lactococcus phage 30804 5
no rank Lactococcus phage 50504 1
no rank Lactococcus phage 51701 1
no rank Lactococcus phage 62402 1
no rank Lactococcus phage 62605 1
no rank Lactococcus phage 62606 1
no rank Lactococcus phage 63302 2
no rank Lactococcus phage 936 group phage PhiS0139 4
no rank Lactococcus phage 96401 2
no rank Lactococcus phage 96603 2
no rank Lactococcus phage BK5-T 3
no rank Lactococcus phage CHPC1020 1
no rank Lactococcus phage CHPC116 1
no rank Lactococcus phage CHPC1161 1
no rank Lactococcus phage CHPC1170 1
no rank Lactococcus phage CHPC1182 1
no rank Lactococcus phage CHPC122 1
no rank Lactococcus phage CHPC1242 1
no rank Lactococcus phage CHPC361 2
no rank Lactococcus phage CHPC958 2
no rank Lactococcus phage CHPC959 3
no rank Lactococcus phage CHPC966 1
no rank Lactococcus phage P680 3
no rank Lactococcus phage phi7 1
no rank Lactococcus phage Q33 1
no rank Leotiomycetes incertae sedis 1
no rank Leptolyngbya group 1174 1 1 55 1 4 2 2
no rank Leptospira biflexa serovar Patoc 1
no rank Leptospira interrogans serovar Copenhageni/Icterohaemorrhagiae 1
no rank Leptospira interrogans serovar Linhai 1
no rank Leptospira interrogans serovar Manilae 1
no rank Luna cluster 3 3 1 40 3
no rank Lysobacteraceae incertae sedis 1
no rank Marivivens group 1
no rank Mesorhizobium ciceri biovar biserrulae 1
no rank Methanococcales incertae sedis 1
no rank Micrococcales incertae sedis 44 6 1
no rank Microcystis aeruginosa PCC 7806SL 1
no rank Microgenomates group incertae sedis 1
no rank Mollicutes incertae sedis 1
no rank Mycoplasma mycoides subsp. capri LC 1
no rank Mycoplasmatota incertae sedis 9 1 2
no rank Neorhizobium galegae bv. officinalis 3 1
no rank Neorhizobium galegae bv. orientalis 1 4
no rank Nitrososphaerota incertae sedis 1
no rank Norovirus isolates 1
no rank Norwalk-like virus Hu/NLV/GI/629/US 1
no rank Nostocales incertae sedis 3
no rank Oceanospirillales incertae sedis 5
no rank Oscillatoriales incertae sedis 518 4 2
no rank Oscillospiraceae incertae sedis 1535 1 100 22 21 27 18 9 6 7 3 2 1
no rank other entries 1 1
no rank other sequences 1 1
no rank Oxytelinae group 5
no rank Pasteurellaceae incertae sedis 1807 7 8 2 3
no rank Penicillium chrysogenum species complex 1 1
no rank Peptostreptococcaceae incertae sedis 3588 1012 2 1 2 3
no rank Phallomycetidae incertae sedis 1
no rank plasmids 1
no rank Plenodomus lingam/Leptosphaeria maculans 'brassicae' group 1
no rank Plenodomus lingam/Leptosphaeria maculans 'lepidii' group 1
no rank Plenodomus lingam/Leptosphaeria maculans species complex 1
no rank Pleosporales incertae sedis 1
no rank Polyporales incertae sedis 1
no rank prasinophyte incertae sedis 1
no rank Prymnesium kappa virus 1
no rank Pseudomonas amygdali pv. lachrymans 3
no rank Pseudomonas phage JD024 1
no rank Pseudomonas syringae group pathovars incertae sedis 1
no rank Pseudomonas syringae pv. actinidiae 1
no rank Pseudomonas syringae pv. maculicola 2
no rank Pseudomonas syringae pv. pisi 2
no rank Pseudomonas syringae pv. syringae 3
no rank Puniceicoccales incertae sedis 1 2
no rank Rhizobium gallicum bv. gallicum 1
no rank Rhizobium leguminosarum bv. trifolii 4
no rank Rhizobium leguminosarum bv. viciae 1
no rank Rhizobium/Agrobacterium group 158 45 5 97 1 4 5 2 1 2 1
no rank Rhodospirillaceae incertae sedis 2
no rank Rhodospirillales incertae sedis 10 8
no rank Rickettsiales genera incertae sedis 2
no rank root 4653 1543 790 82 76 35 32 32 31 28 15 11 7 6 4 3 3 2 1 1
no rank Saccharomycetales incertae sedis 31 9 1
no rank Salmonella enterica subsp. enterica serovar Agona 1
no rank Salmonella enterica subsp. enterica serovar Antsalova 3
no rank Salmonella enterica subsp. enterica serovar Gallinarum 3
no rank Salmonella enterica subsp. enterica serovar Heidelberg 15
no rank Salmonella enterica subsp. enterica serovar Montevideo 1
no rank Salmonella enterica subsp. enterica serovar Sloterdijk 1
no rank Salmonella enterica subsp. enterica serovar Waycross 1
no rank Salmonella enterica subsp. salamae serovar 55:k:z39 3
no rank Salmonella phage L6jm 1
no rank Salmonella phage vB_SnwM_CGG4-1 1
no rank Shigella phage Sf15 1
no rank Shigella phage Sf19 1
no rank Silvanigrellales incertae sedis 3
no rank Sinorhizobium/Ensifer group 8 3 91 9 13 2 1
no rank Sorangiineae incertae sedis 5 18
no rank Staphylininae group 4
no rank Stramenopiles incertae sedis 1
no rank Streptococcus gordonii str. Challis substr. CH1 2
no rank Streptococcus phage 5093 2
no rank Streptococcus phage 53 1
no rank Streptococcus phage 9874 1
no rank Streptococcus phage CHPC1041 4
no rank Streptococcus phage CHPC1042 2
no rank Streptococcus phage CHPC1109 1
no rank Streptococcus phage CHPC1148 1
no rank Streptococcus phage CHPC1152 1
no rank Streptococcus phage CHPC1156 1
no rank Streptococcus phage CHPC1230 2
no rank Streptococcus phage CHPC1246 1
no rank Streptococcus phage CHPC663 1
no rank Streptococcus phage CHPC879 1
no rank Streptococcus phage P7601 1
no rank Streptococcus phage SW1151 1
no rank Streptococcus phage SW4 1
no rank Streptococcus phage TP-J34 1
no rank Tachyporinae group 3
no rank Telluria group 41 5 95 1 19 5 1 2 1 1
no rank Thermomicrobia incertae sedis 10
no rank Thermoplasmatales incertae sedis 21
no rank Tissierellia incertae sedis 4577 990 14 94 5 1 1 3 25 6 7 2
no rank Trebouxiophyceae incertae sedis 1 1
no rank unclassified Abiotrophia 1
no rank unclassified Absiella 4 1
no rank unclassified Acetanaerobacterium 2 3
no rank unclassified Acetatifactor 2 3
no rank unclassified Acetivibrio 1
no rank unclassified Acetobacter 4 1
no rank unclassified Acetobacteraceae 44 2
no rank unclassified Acetobacterium 79 1
no rank unclassified Acholeplasma 1
no rank unclassified Acholeplasmatales 1
no rank unclassified Achromobacter 18 2 1
no rank unclassified Acidaminococcaceae 3
no rank unclassified Acidaminococcus 31 1
no rank unclassified Acidianus 2
no rank unclassified Acidiferrobacter 3 1
no rank unclassified Acidithiobacillus 2
no rank unclassified Acidobacteriaceae 3 2
no rank unclassified Acidocella 2
no rank unclassified Acidovorax 1 38 2 1
no rank unclassified Acinetobacter 9 12 5 2 2
no rank unclassified Actibacterium 1 2
no rank unclassified Actinoalloteichus 2
no rank unclassified Actinobaculum 24 7 1 2
no rank unclassified Actinomadura 16 2
no rank unclassified Actinomyces 2 279 93 26 2 3 2 1
no rank unclassified Actinomycetaceae 1 1
no rank unclassified Actinomycetes 91 9 1 3
no rank unclassified Actinomycetota 2 3
no rank unclassified Actinoplanes 15 2 2
no rank unclassified Actinotalea 5
no rank unclassified Acutalibacter 2
no rank unclassified Acuticoccus 1 2
no rank unclassified Adlercreutzia 1
no rank unclassified Aequorivita 3 1 2
no rank unclassified Aerococcaceae 1
no rank unclassified Aeromicrobium 1 6 1
no rank unclassified Aeromonas 1 3 1 1
no rank unclassified Afipia 5 3
no rank unclassified Agathobacter 3
no rank unclassified Agathobaculum 1 1
no rank unclassified Aggregatibacter 1 1
no rank unclassified Aglimvirinae 1
no rank unclassified Agreia 1
no rank unclassified Agrobacterium 1 1
no rank unclassified Agrococcus 7 1
no rank unclassified Agromyces 5 2 1
no rank unclassified Akkermansia 5 2
no rank unclassified Alcaligenaceae 11
no rank unclassified Alcaligenes 2
no rank unclassified Alcanivorax 12 2 2
no rank unclassified Algibacter 2
no rank unclassified Algoriphagus 2
no rank unclassified Aliceevansviridae 7
no rank unclassified Alicyclobacillus 2
no rank unclassified Alistipes 3 528 94 14 10 25 27 3 3
no rank unclassified Alkaliflexus 1 2
no rank unclassified Alkalihalobacillus 1 2
no rank unclassified Alkaliphilus 1 2
no rank unclassified Alloactinosynnema 11 5 2
no rank unclassified Allobaculum 2
no rank unclassified Allomuricauda 2
no rank unclassified Alphabaculovirus 1
no rank unclassified Alphaproteobacteria 1 2
no rank unclassified Altererythrobacter 13 1 1
no rank unclassified Alteromonas 3 2 2
no rank unclassified Aminobacter 13 2
no rank unclassified Amniculibacterium 2
no rank unclassified Amycolatopsis 15 4 2
no rank unclassified Anabaena 3 2
no rank unclassified Anaerococcus 2 234 1 1
no rank unclassified Anaerocolumna 1
no rank unclassified Anaerofilum 1 5 1
no rank unclassified Anaerolineaceae 62 1 3
no rank unclassified Anaerolineae 16 3
no rank unclassified Anaeromassilibacillus 8 3 1
no rank unclassified Anaeromyxobacter 55 1 2
no rank unclassified Anaerosalibacter 1
no rank unclassified Anaerostipes 1 69 23 3 8 3
no rank unclassified Anaerotignum 1 1
no rank unclassified Anaerotruncus 3 135 10 1 3 1
no rank unclassified Anaerovibrio 7
no rank unclassified Ancylobacter 10 2
no rank unclassified Anderseniella 6 4
no rank unclassified Aneurinibacillus 43 2
no rank unclassified Angelakisella 3
no rank unclassified Anoxybacillus 3 1
no rank unclassified Antarcticibacterium 1
no rank unclassified Aquabacterium 2
no rank unclassified Aquaspirillum 32 1
no rank unclassified Aquihabitans 2
no rank unclassified Aquiluna 2
no rank unclassified Aquimarina 13 4 2
no rank unclassified Aquitalea 6 3
no rank unclassified Arachidicoccus 20 4 2 1
no rank unclassified Arcanobacterium 26 4 2
no rank unclassified Archaea 1
no rank unclassified Arcobacter 1 1
no rank unclassified Arcobacteraceae 4 1
no rank unclassified Armatimonadota 21
no rank unclassified Arsenicicoccus 17 1
no rank unclassified Arsenophonus 1 1
no rank unclassified Arthrobacter 5 51 4 2 1
no rank unclassified Arthrospira 1
no rank unclassified Asteriusvirus 1
no rank unclassified Asticcacaulis 1
no rank unclassified Atopobiaceae 1 2
no rank unclassified Atopobium 60 3 1 1 2
no rank unclassified Aurantimicrobium 8 1 2
no rank unclassified Aurantimonas 2 1
no rank unclassified Aureimonas 5 1 2
no rank unclassified Auritidibacter 12
no rank unclassified Azoarcus 42 1 2
no rank unclassified Azospira 6
no rank unclassified Azospirillum 14 4 2 2
no rank unclassified Babesia 1
no rank unclassified Bacillaceae 5
no rank unclassified Bacilli 1 2
no rank unclassified Bacillota 60 9 20 2 18 3 2
no rank unclassified Bacillus (in: firmicutes) 9 26 78 1 8 2 1
no rank unclassified Bacillus cereus group 1 1
no rank unclassified Bacteria 2 90 10 27 1 3 1
no rank unclassified bacterial viruses 20 1 12
no rank unclassified Bacteroidaceae 1 3
no rank unclassified Bacteroidales 2 72 1 3
no rank unclassified Bacteroides 4 748 97 15 29 29 30 3 3 1
no rank unclassified Bacteroidia 2
no rank unclassified Bacteroidota 24 2 3
no rank unclassified Balneolaceae 2
no rank unclassified Barnesiella 33 1 2 3
no rank unclassified Barnesiellaceae 1
no rank unclassified Bartonella 1 2
no rank unclassified Bdellovibrio 2
no rank unclassified Beijerinckiaceae 14 1
no rank unclassified Bergeyella 3
no rank unclassified Betaproteobacteria 1 9 1 3
no rank unclassified Bifidobacteriaceae (miscellaneous) 2
no rank unclassified Bifidobacterium 2 66 1 3 5 1 2 1
no rank unclassified Bilophila 89 3 19 3
no rank unclassified Bizionia 1
no rank unclassified Blastococcus 2 1
no rank unclassified Blastocystis 1
no rank unclassified Blattabacterium 1
no rank unclassified Blautia 3 409 97 36 16 29 28 3 3 1
no rank unclassified Bordetella 41 1 1
no rank unclassified Borrelia 1
no rank unclassified Bosea (in: a-proteobacteria) 1 24 3 2
no rank unclassified Boseongicola 4
no rank unclassified Brachybacterium 5 20 1 2
no rank unclassified Brachyspira (in: bacteria) 2
no rank unclassified Bradyrhizobiaceae 1
no rank unclassified Bradyrhizobium 4 41 4 2 1
no rank unclassified Brenneria 1
no rank unclassified Breoghania 15 2 1
no rank unclassified Brevibacillus 34 2 2
no rank unclassified Brevibacterium 1 16 1
no rank unclassified Brevundimonas 4 17 3 2
no rank unclassified Bulleidia 1 2
no rank unclassified Burkholderia 26 4 2 2
no rank unclassified Burkholderiaceae 18
no rank unclassified Burkholderiales 80 5 23 4 3
no rank unclassified Buttiauxella 4 1
no rank unclassified Butyricicoccus 84 3 9 3 1
no rank unclassified Butyricimonas 284 1 15 3 2
no rank unclassified Butyrivibrio 1
no rank unclassified Caballeronia 1
no rank unclassified Caldimonas 2
no rank unclassified Caloramator 90 2 2
no rank unclassified Calothrix 3 2
no rank unclassified Campylobacter 7 6 2 2 2
no rank unclassified Candidatus Accumulibacter 13
no rank unclassified Candidatus Arthromitus 32 2 2
no rank unclassified Candidatus Blochmanniella 1
no rank unclassified Candidatus Cardinium 1
no rank unclassified Candidatus Dependentiae 2 1 1
no rank unclassified Candidatus Gastranaerophilales 3
no rank unclassified Candidatus Gracilibacteria 1
no rank unclassified Candidatus Izimaplasma 18 1 2
no rank unclassified Candidatus Melainabacteria 51 1 1
no rank unclassified Candidatus Methanoliparum 1
no rank unclassified Candidatus Methanoperedenaceae 1
no rank unclassified Candidatus Nanopusillus 1
no rank unclassified Candidatus Nanosynbacter 1 1
no rank unclassified Candidatus Nitrosotenuis 1
no rank unclassified Candidatus Pelagibacter 1 1 2
no rank unclassified Candidatus Profftia 1
no rank unclassified Candidatus Saccharibacteria 58 1 5 1
no rank unclassified Candidatus Stoquefichus 2
no rank unclassified Candidatus Xiphinematobacter 1
no rank unclassified Capnocytophaga 1 18 5 2
no rank unclassified Caproicibacterium 1
no rank unclassified Caproiciproducens 95 1 6 3 1
no rank unclassified Cardiobacterium 2
no rank unclassified Carnobacterium 22 5 1 2 2
no rank unclassified Catellatospora 2
no rank unclassified Catenibacterium 7 1 3 1
no rank unclassified Caudoviricetes 27 2 1
no rank unclassified Caulobacter 12 3 3 2
no rank unclassified Caulobacteraceae 4
no rank unclassified Ceceduovirus 1
no rank unclassified Cellulomonas 11 2 2
no rank unclassified Cellulophaga 2
no rank unclassified Cellulosilyticum 87 6 3
no rank unclassified Cellulosimicrobium 1 2 1
no rank unclassified Cellvibrio 8 1 2
no rank unclassified Chelativorans 10 1
no rank unclassified Chelatococcus 9 2
no rank unclassified Chitiniphilus 1
no rank unclassified Chitinophaga 68 3 2
no rank unclassified Chlamydia 1
no rank unclassified Chlorobaculum 4
no rank unclassified Chondrocystis 1 2
no rank unclassified Christensenella 52 5 2 1 3
no rank unclassified Christensenellaceae 1 1 3
no rank unclassified Christiangramia 1 1
no rank unclassified Chromatiaceae 25 1 2
no rank unclassified Chromatiales 1
no rank unclassified Chromobacterium 13 1
no rank unclassified Chroococcidiopsis 1 1
no rank unclassified Chryseobacterium 2 39 5 2 1
no rank unclassified Citricoccus 1
no rank unclassified Citrobacter 51 18 1 3 1
no rank unclassified Citrobacter freundii complex 6 1
no rank unclassified Citromicrobium 7 3
no rank unclassified Clostridia 2 8 1 3
no rank unclassified Clostridiaceae 1 85 5 20 2 3
no rank unclassified Clostridiales Family XIII 3 2
no rank unclassified Clostridioides 1
no rank unclassified Clostridium 1 1 97 15 33 30 6 8 1 3 3 1
no rank unclassified Cobetia 3
no rank unclassified Coccomyxa (in: green algae) 1
no rank unclassified Coetzeevirus 1
no rank unclassified Cohaesibacter 24 1
no rank unclassified Cohnella 14 2 1
no rank unclassified Colidextribacter 3 1
no rank unclassified Collinsella 3 17 2 2 1
no rank unclassified Colwellia 3 2
no rank unclassified Comamonas 6 9 1
no rank unclassified Conexibacter 2
no rank unclassified Coprobacillaceae 1
no rank unclassified Coprobacillus 2 20 3 1
no rank unclassified Coprobacter 1
no rank unclassified Coprococcus 2 98 10 21 27 18 3 1
no rank unclassified Coraliomargarita 1
no rank unclassified Coriobacteriaceae 1 1 1 2 3
no rank unclassified Coriobacteriia 2
no rank unclassified Corynebacteriaceae 66
no rank unclassified Corynebacterium 2 297 86 2 2
no rank unclassified Crassvirales 10 8 4 1
no rank unclassified Craurococcus 1
no rank unclassified Cressdnaviricota 1
no rank unclassified Croceicoccus 2
no rank unclassified Cronobacter 1
no rank unclassified Cryobacterium 2 6 1 2
no rank unclassified Cryptococcus (in: basidiomycete fungi) 10
no rank unclassified Cupriavidus 1
no rank unclassified Curtobacterium 1 3 1 1
no rank unclassified Curvibacter 1
no rank unclassified Cyanobacteriota 1 1 1
no rank unclassified Cyanobium 24
no rank unclassified Cyanothece 3
no rank unclassified Cyclobacteriaceae 10
no rank unclassified Cycloclasticus 1 1
no rank unclassified Cytophagales 5 3
no rank unclassified Dechloromonas 21
no rank unclassified Defluviicoccus 1
no rank unclassified Dehalobacter 8 1 2
no rank unclassified Dehalogenimonas 2
no rank unclassified Deinococcus 29 1 2 1
no rank unclassified Delftia 1 14 1
no rank unclassified Deltaproteobacteria 1
no rank unclassified Demequina 2
no rank unclassified Denitratisoma 18
no rank unclassified Dermabacter 27
no rank unclassified Dermacoccus 1
no rank unclassified Desulfomicrobium 1 1
no rank unclassified Desulfosarcina 2
no rank unclassified Desulfosporosinus 1
no rank unclassified Desulfotomaculum 3 6 3 1
no rank unclassified Desulfovibrio 92 82 4 2 12 3
no rank unclassified Desulfovibrionaceae 1 3
no rank unclassified Desulfuromonas 49 8 11 2
no rank unclassified Devosia 26 3 2
no rank unclassified Dialister 286 1
no rank unclassified Diaminobutyricimonas 6 1
no rank unclassified Diapherotrites 1
no rank unclassified Diaphorobacter 37 1
no rank unclassified Dickeya 1 1
no rank unclassified Dietzia 11 1
no rank unclassified Dirofilaria 1
no rank unclassified Dokdonia 3 2
no rank unclassified Dolichospermum 1
no rank unclassified Dorea 7 6 29 3 1
no rank unclassified Drancourtella 1 1
no rank unclassified dsDNA viruses 1
no rank unclassified Duganella 8 1
no rank unclassified Duncaniella 4 3
no rank unclassified Duodenibacillus 1
no rank unclassified Dyadobacter 17 2
no rank unclassified Dyella 7 1
no rank unclassified Dysgonomonas 44 1 2 1
no rank unclassified Dysosmobacter 1 3 1
no rank unclassified Echinicola 2
no rank unclassified Ectobacillus 2
no rank unclassified Ectothiorhodospira 10 1 2
no rank unclassified Ectothiorhodospiraceae 1 26
no rank unclassified Edaphobacter 25 1
no rank unclassified Edwardsiella (in: enterobacteria) 1
no rank unclassified Eggerthella 3 86 93 8 27 20 3 2
no rank unclassified Eggerthellaceae 52 2 1 3 2
no rank unclassified Ehrlichia 1
no rank unclassified Eisenbergiella 2 3
no rank unclassified Elizabethkingia 12 2
no rank unclassified Emergencia 1
no rank unclassified Emticicia 2
no rank unclassified Endozoicomonas 1 2
no rank unclassified Ensifer 2
no rank unclassified Enterobacter 64 36 3 2 2 1 1
no rank unclassified Enterobacter cloacae complex 4 2 1
no rank unclassified Enterobacteriaceae 30 10 4 2 1 1
no rank unclassified Enterocloster 3
no rank unclassified Enterococcus 39 12 2 1 2 2 1
no rank unclassified Enterorhabdus 3
no rank unclassified entries 1 2
no rank unclassified Erwinia 1 9 1 2
no rank unclassified Erwiniaceae 2
no rank unclassified Erysipelothrix 49 1 2
no rank unclassified Erysipelotrichaceae 98 2 26 5 3
no rank unclassified Erysipelotrichales 1
no rank unclassified Erythrobacter 11 1 1
no rank unclassified Escherichia 7 1 2 1 2 2
no rank unclassified Eubacteriaceae 2 3
no rank unclassified Eubacteriales 2 98 14 28 24 10 3
no rank unclassified Eubacterium (in: firmicutes) 2 44 3 5 3 30 2 1 3 3 1
no rank unclassified Eunotogramma 1
no rank unclassified Evansella 1
no rank unclassified Exiguobacterium 6 4 2
no rank unclassified Facklamia 9
no rank unclassified Faecalibacillus 3 1
no rank unclassified Faecalibacterium 575 9 4 12 2 3 3 1
no rank unclassified Faecalicatena 1 1 3
no rank unclassified Falcatimonas 1
no rank unclassified Ferrimonas 2
no rank unclassified Fibrella 26 1 2
no rank unclassified Filimonas 1
no rank unclassified Fimbriimonadaceae 1
no rank unclassified Fimbriimonadales 1
no rank unclassified Finegoldia 3 171 1
no rank unclassified Fischerella 3 1 1
no rank unclassified Flagellimonas 2
no rank unclassified Flammeovirga 47 3 2
no rank unclassified Flammeovirgaceae 50 4
no rank unclassified Flaviramulus 1
no rank unclassified Flavisolibacter 1
no rank unclassified Flavobacteriaceae 1 44 4 2
no rank unclassified Flavobacteriales 4 1
no rank unclassified Flavobacterium 2 37 5 2
no rank unclassified Flavonifractor 9 1 1
no rank unclassified Flintibacter 96 2 2 1 3 1
no rank unclassified Formosa 2 3 2
no rank unclassified Francisella 2 2 1
no rank unclassified Frankia 3 3
no rank unclassified Frankiales 4 1
no rank unclassified Frisingicoccus 5
no rank unclassified Frondihabitans 12 1 1
no rank unclassified Fungi 1
no rank unclassified Fusibacter 1
no rank unclassified Fusicatenibacter 1 3 1
no rank unclassified Fusobacterium 54 9 1 1 1 2
no rank unclassified Galbibacter 4 1
no rank unclassified Galdieria 1
no rank unclassified Gammaproteobacteria 63 1 4 2
no rank unclassified Gardnerella 18
no rank unclassified Geitlerinema 22 2 1
no rank unclassified Gelderlandvirus 1
no rank unclassified Gelria 2
no rank unclassified Gemella 1 23 20 3 2
no rank unclassified Geminocystis 1 1 2
no rank unclassified Gemmata 2
no rank unclassified Gemmataceae 11
no rank unclassified Gemmiger 5 3 1
no rank unclassified Geobacillus 3 1 1
no rank unclassified Geobacter 50 80 3 2
no rank unclassified Geomonas 2
no rank unclassified Georgenia 1
no rank unclassified Gilliamella 2
no rank unclassified Gillisia 1
no rank unclassified Glaciimonas 1
no rank unclassified Glaesserella 10 1 2
no rank unclassified Gloeocapsa 2
no rank unclassified Glutamicibacter 1
no rank unclassified Gokushovirinae 3 1
no rank unclassified Gordonia (in: high G+C Gram-positive bacteria) 16 1 2
no rank unclassified Gordonibacter 2 1
no rank unclassified Gram-positive bacteria 1
no rank unclassified Granulicatella 1
no rank unclassified Granulicella 28 1
no rank unclassified Haemophilus 2 36 2 7 1 1
no rank unclassified Hafnia 4
no rank unclassified Hahella 2 2
no rank unclassified Halarchaeum 1
no rank unclassified Halobacillus 1 2
no rank unclassified Halobacteriovorax 1 1
no rank unclassified Halobacterium 1
no rank unclassified Halobaculum 1
no rank unclassified Halocella 53 4
no rank unclassified Halolamina 1
no rank unclassified Halomarina 1
no rank unclassified Halomicrobium 1
no rank unclassified Halomonas 15 4 2
no rank unclassified Haloplanus 1
no rank unclassified Haloprofundus 1
no rank unclassified Halorhabdus 1
no rank unclassified Halorientalis 1 1
no rank unclassified Halothece 1
no rank unclassified Halothiobacillus 11 1
no rank unclassified Halovivax 2
no rank unclassified Helicobacter 1 2
no rank unclassified Heliobacterium 1
no rank unclassified Herbaspirillum 30 3 9 4 2
no rank unclassified Herbiconiux 12 2
no rank unclassified Herelleviridae 4
no rank unclassified Hoeflea 4 1
no rank unclassified Holdemanella 1 1
no rank unclassified Holdemania 5 1 1
no rank unclassified Holosporaceae 3
no rank unclassified Humibacter 7
no rank unclassified Hungatella 3
no rank unclassified Hydrogenibacillus 2
no rank unclassified Hydrogenobaculum 1 1
no rank unclassified Hydrogenophaga 1 33 1 2
no rank unclassified Hymenobacter 76 5 2
no rank unclassified Hyphobacterium 1
no rank unclassified Hyphomicrobiales 11 1 2
no rank unclassified Hyphomicrobium 9 1
no rank unclassified Hyphomonas 8 1 1
no rank unclassified Iamia 2
no rank unclassified Idiomarina 1 1
no rank unclassified Idiomarinaceae 1
no rank unclassified Ignavibacteriota 27 1
no rank unclassified Inoviridae 2 12
no rank unclassified Intestinibacillus 1
no rank unclassified Intestinimonas 11 1 3 1
no rank unclassified Intestiviridae 9 4
no rank unclassified Iodobacter 2 3 2
no rank unclassified Janibacter 2
no rank unclassified Jannaschia 1 1
no rank unclassified Janthinobacterium 17 4 1
no rank unclassified Jatrophihabitans 8
no rank unclassified Jeongeupia 22 2 1
no rank unclassified Jeotgalibaca 1 4 2
no rank unclassified Jeotgalicoccus 1 2
no rank unclassified Jiangella 8 4
no rank unclassified Jonquetella 4
no rank unclassified Jouyvirus 1
no rank unclassified Kaistella 2
no rank unclassified Kaistia 1
no rank unclassified Kibdelosporangium 10
no rank unclassified Kinneretia 1 1
no rank unclassified Kitasatospora 6 2 2
no rank unclassified Klebsiella 137 7 3 1 2
no rank unclassified Kluyvera 3 1
no rank unclassified Kocuria 1 3 1 1
no rank unclassified Koinonema 1 2
no rank unclassified Kordia 1
no rank unclassified Kordiimonas 2
no rank unclassified Kosakonia 7 1
no rank unclassified Kurthia 17 3 1
no rank unclassified Kutzneria 1
no rank unclassified Labrenzia 17 2 2 1
no rank unclassified Labrys (in: a-proteobacteria) 2
no rank unclassified Lachnoanaerobaculum 9 5
no rank unclassified Lachnobacterium 1 1 3
no rank unclassified Lachnoclostridium 98 1 4 4 3 1
no rank unclassified Lachnospira 2 3 1
no rank unclassified Lachnospiraceae 19 1256 2 102 28 30 30 9 13 1 1 6 3 3
no rank unclassified Lachnotalea 8 2 1
no rank unclassified Lacinutrix 1 2
no rank unclassified Lacrimispora 1
no rank unclassified Lactobacillaceae 1
no rank unclassified Lactobacillus 2 68 11 1 3 2 2 2
no rank unclassified Lactococcus 1 60 2
no rank unclassified Lactonifactor 1
no rank unclassified Lambdavirus 1
no rank unclassified Lancefieldella 1
no rank unclassified Larkinella 1
no rank unclassified Lautropia 8
no rank unclassified Lawsonibacter 3 1
no rank unclassified Leclercia 16 1 1
no rank unclassified Lederbergvirus 1
no rank unclassified Leeuwenhoekiella 4
no rank unclassified Legionella 1
no rank unclassified Leifsonia 4
no rank unclassified Leisingera 1 2
no rank unclassified Lelliottia 5 1 1
no rank unclassified Lentibacillus 18 1 2
no rank unclassified Lentilitoribacter 2 1
no rank unclassified Lentisphaeria 2 2
no rank unclassified Lentisphaerota 1
no rank unclassified Leptolyngbya 7 3 2
no rank unclassified Leptolyngbyaceae 3
no rank unclassified Leptotrichia 11 64 5 2
no rank unclassified Leucobacter 2 1
no rank unclassified Leuconostoc 3 1
no rank unclassified Ligilactobacillus 1
no rank unclassified Limnobacter 1
no rank unclassified Limnohabitans 16 2 1
no rank unclassified Listeria 12 2
no rank unclassified Longibaculum 97 1 4 1 3
no rank unclassified Luteibacter 2
no rank unclassified Luteimonas 4 1 2
no rank unclassified Luteitalea 2
no rank unclassified Lutibacter 2
no rank unclassified Lysinibacillus 38 4 2
no rank unclassified Lysobacter 3 2 1 1 1
no rank unclassified Lysobacteraceae 1
no rank unclassified Macrococcus 19 1
no rank unclassified Magnetospira 13 1 1
no rank unclassified Magnetospirillum 9 1 2
no rank unclassified Mamastrovirus 1
no rank unclassified Mannheimia 1 7 1
no rank unclassified Maribacter 7 4 2
no rank unclassified Maribius 3
no rank unclassified Marinifilaceae 4
no rank unclassified Mariniflexile 4 4 2
no rank unclassified Marinilactibacillus 29 4 2
no rank unclassified Marinitoga 2
no rank unclassified Marinobacter 23 2 1 1
no rank unclassified Marinobacterium 1
no rank unclassified Marinomonas 1 1
no rank unclassified Marixanthomonas 1
no rank unclassified Martelella 28 1
no rank unclassified Massilia 18 11 4 2
no rank unclassified Massilimicrobiota 1
no rank unclassified Massilioclostridium 3
no rank unclassified Mediterraneibacter 1 3 1
no rank unclassified Megamonas 1
no rank unclassified Megasphaera 32 1
no rank unclassified Meiothermus 1
no rank unclassified Melaminivora 3 1
no rank unclassified Mesobacillus 2
no rank unclassified Mesoflavibacter 2
no rank unclassified Mesorhizobium 4 20 2 2 1
no rank unclassified Metabacillus 2
no rank unclassified Methanobacterium 1
no rank unclassified Methanobrevibacter 9 4 8 1 13 2
no rank unclassified Methanofervidicoccus 1
no rank unclassified Methanofollis 1
no rank unclassified Methanogenium 1
no rank unclassified Methanolinea 1
no rank unclassified Methanomassiliicoccaceae 4 1
no rank unclassified Methanomicrobia 10
no rank unclassified Methanosarcina 8 8 2
no rank unclassified Methanosarcinales 1
no rank unclassified Methanosphaera 2 8 1 8 2
no rank unclassified Methanospirillum 1
no rank unclassified Methanothrix 1
no rank unclassified Methylacidimicrobium 2
no rank unclassified Methylibium 4
no rank unclassified Methylobacter 2
no rank unclassified Methylobacterium 3 19 4 2
no rank unclassified Methyloceanibacter 10 1
no rank unclassified Methylococcus 1
no rank unclassified Methylocystis 2 1
no rank unclassified Methyloligella 15 1
no rank unclassified Methylomonas 5 1 1
no rank unclassified Methylophilaceae 1
no rank unclassified Methylophilus 1
no rank unclassified Methylosinus 5 1 1
no rank unclassified Methyloversatilis 23 2
no rank unclassified Methylovirgula 2
no rank unclassified Microbacteriaceae 12
no rank unclassified Microbacterium 21 2 2 1
no rank unclassified Microbulbifer 25 3 2
no rank unclassified Microcella 1
no rank unclassified Micrococcus 5
no rank unclassified Microcystis 1
no rank unclassified Microlunatus 10 1
no rank unclassified Micromonospora 5 2 1
no rank unclassified Micropruina 11
no rank unclassified Microscilla 1
no rank unclassified Microvirga 11 2
no rank unclassified Microviridae 12 9 7
no rank unclassified Miniimonas 8 1 1
no rank unclassified Mitoviridae 1
no rank unclassified Mitsuaria 17 3
no rank unclassified Mitsuokella 5 2
no rank unclassified Mobiluncus 1
no rank unclassified Modestobacter 1
no rank unclassified Mogibacterium 2 1
no rank unclassified Moineauvirus 1
no rank unclassified Monomastix 1
no rank unclassified Moorella (in: firmicutes) 1 2
no rank unclassified Moraxella 2 2
no rank unclassified Moraxellaceae 1
no rank unclassified Mucilaginibacter 42 3 2
no rank unclassified Murdochiella 161
no rank unclassified Muribaculaceae 1
no rank unclassified Muricomes 2
no rank unclassified Muvirus 1
no rank unclassified Mycetocola 1
no rank unclassified Mycobacterium 2 5 13 1 1 2
no rank unclassified Mycolicibacterium 1
no rank unclassified Mycoplasma 3 1 2
no rank unclassified Mycoplasmatales 1
no rank unclassified Mycoplasmatota 47 5
no rank unclassified Myroides 1 2
no rank unclassified Nakamurella 3 1 1
no rank unclassified Natrinema 1 1
no rank unclassified Natronococcus 1
no rank unclassified Nautilia 1
no rank unclassified Negativicoccus 100
no rank unclassified Neisseria 25 2 2
no rank unclassified Neisseriaceae 1
no rank unclassified Neobacillus 1
no rank unclassified Neochlamydia 1 1
no rank unclassified Neorhizobium 12 4 1
no rank unclassified Nesterenkonia 23 1 1
no rank unclassified Nevskia 1
no rank unclassified Niallia 1 2
no rank unclassified Nissabacter 33
no rank unclassified Nitratireductor 27 3 2
no rank unclassified Nitratiruptor 1
no rank unclassified Nitrosomonadales 1
no rank unclassified Nitrosomonas 1 3 1
no rank unclassified Nitrospira 2
no rank unclassified Nocardia 12
no rank unclassified Nocardioidaceae 3
no rank unclassified Nocardioides 15 2 2
no rank unclassified Nonlabens 3 2
no rank unclassified Nonomuraea 18 1 2
no rank unclassified Nordella 15 1
no rank unclassified Nostoc 6 2 1
no rank unclassified Nostocales 3
no rank unclassified Nostocoides 3
no rank unclassified Noviherbaspirillum 20 1
no rank unclassified Novosphingobium 1 7 1 2 1
no rank unclassified Oceanicola 1
no rank unclassified Oceanihabitans 1
no rank unclassified Oceanimonas 52
no rank unclassified Oceanirhabdus 2
no rank unclassified Oceanotoga 1
no rank unclassified Ochrobactrum 19 1
no rank unclassified Octadecabacter 2 1
no rank unclassified Odoribacter 4 3
no rank unclassified Odoribacteraceae 1 2
no rank unclassified Oenococcus 1 1
no rank unclassified Oerskovia 13 2
no rank unclassified Oliverpabstia 3
no rank unclassified Olivibacter 2 3
no rank unclassified Olleya 5 1
no rank unclassified Olsenella 44 96 8 1 21 1 1 2 1
no rank unclassified Opitutaceae 42 1 3
no rank unclassified Opitutia 2
no rank unclassified Opitutus 29 4
no rank unclassified Oribacterium 22 1
no rank unclassified Ornithinimicrobium 3 2
no rank unclassified Oscheius 1
no rank unclassified Oscillatoriales 3
no rank unclassified Oscillibacter 1 1 97 12 23 28 27 9 3 3 1
no rank unclassified Oscillospiraceae 33 12 28 5 2 3
no rank unclassified Oslovirus 1
no rank unclassified Ostreococcus 2
no rank unclassified Ottowia 27 3 2
no rank unclassified Oxalobacteraceae 12
no rank unclassified Paenibacillaceae 59 1
no rank unclassified Paenibacillus 92 6 2 1
no rank unclassified Paeniglutamicibacter 1 1
no rank unclassified Paenisporosarcina 4 4 2 2
no rank unclassified Paludibacterium 1 2
no rank unclassified Pandoraea 15 3 1
no rank unclassified Pantoea 2 52 29 1 2
no rank unclassified Parabacteroides 142 97 12 2 29 30 2 3 2
no rank unclassified Parablautia 1
no rank unclassified Paraburkholderia 13 2 1
no rank unclassified Paracoccaceae 37 1 2
no rank unclassified Paracoccus (in: a-proteobacteria) 28 1 2 2
no rank unclassified Paraeggerthella 4
no rank unclassified Parageobacillus 2
no rank unclassified Paraglaciecola 2
no rank unclassified Paralcaligenes 2
no rank unclassified Paramuribaculum 1
no rank unclassified Paraprevotella 2
no rank unclassified Parasutterella 2 3
no rank unclassified Parvimonas 3 2 1
no rank unclassified Pasteurellaceae 15 1
no rank unclassified Paucibacter 1 33 1 1
no rank unclassified Pedinophyceae 1
no rank unclassified Pediococcus 14
no rank unclassified Pedobacter 27 3 2 3 1
no rank unclassified Peduovirinae 1
no rank unclassified Pelagibacteraceae 1
no rank unclassified Pelomonas 1
no rank unclassified Pelosinus 62 3 2
no rank unclassified Peptococcaceae 36 1 2 1
no rank unclassified Peptococcus 79 1
no rank unclassified Peptoniphilaceae 1 1
no rank unclassified Peptoniphilus 3 403 92 1 2 2
no rank unclassified Peptostreptococcaceae 2 94 1 1 3
no rank unclassified Peptostreptococcus 5 1
no rank unclassified Persicobacter 1 4 2
no rank unclassified Petrimonas 73
no rank unclassified Phaeobacter 3
no rank unclassified Phascolarctobacterium 68 2 9 11 1 4 3 1
no rank unclassified Phenylobacterium 2
no rank unclassified Phocaeicola 2
no rank unclassified Photobacterium 1
no rank unclassified Phycicoccus 5 2 1
no rank unclassified Phycisphaerae 29 2
no rank unclassified Phyllobacterium 1
no rank unclassified Phytobacter 2 1
no rank unclassified phytoplasmas 3
no rank unclassified Picobirnavirus 1
no rank unclassified Picornavirales 1
no rank unclassified Picornaviridae 1
no rank unclassified Picosynechococcus 2 2
no rank unclassified Pigmentiphaga 39 3 2
no rank unclassified Pirellula 2
no rank unclassified Piscinibacter 1
no rank unclassified Planctomyces 45 1 2
no rank unclassified Planctomycetaceae 3
no rank unclassified Planctomycetota 46 2
no rank unclassified Planococcus (in: firmicutes) 16 3 2
no rank unclassified Planomicrobium 23
no rank unclassified Plantactinospora 5 2 2
no rank unclassified Plantibacter 1 1
no rank unclassified Pleomorphomonas 11 1
no rank unclassified Pleurocapsa 1 2
no rank unclassified Polaribacter 13 5 2
no rank unclassified Polaromonas 12 1
no rank unclassified Polynucleobacter 1 2
no rank unclassified Polysiphonia 1
no rank unclassified Pontibacillus 17 2
no rank unclassified Pontibacter 38 2
no rank unclassified Porphyrobacter 1 8 1 1
no rank unclassified Porphyromonadaceae 1 2 1 1 1 1
no rank unclassified Porphyromonas 126 1 2 22 1 3 2
no rank unclassified Pradoshia 35 2
no rank unclassified Prevotella 1 55 94 9 3 7 2 3 1
no rank unclassified Prevotellaceae 1 2
no rank unclassified Priestia 1
no rank unclassified Prochlorococcus 1
no rank unclassified Propionibacterium 42 8 1
no rank unclassified Propioniciclava 1
no rank unclassified Propionispora 1
no rank unclassified Prosthecochloris 51 4 2
no rank unclassified Proteiniclasticum 1
no rank unclassified Proteomonas 1
no rank unclassified Proteus (in: enterobacteria) 1
no rank unclassified Providencia 1
no rank unclassified Przondovirus 1
no rank unclassified Pseudactinotalea 11 2
no rank unclassified Pseudanabaena 1 3 2
no rank unclassified Pseudarthrobacter 3
no rank unclassified Pseudoalteromonas 1 1
no rank unclassified Pseudobutyrivibrio 1 2 19 1
no rank unclassified Pseudochrobactrum 1 2
no rank unclassified Pseudoclavibacter 26 2
no rank unclassified Pseudodesulfovibrio 39 2
no rank unclassified Pseudoflavonifractor 9 1
no rank unclassified Pseudogulbenkiania 13 1 1
no rank unclassified Pseudolabrys 7 1
no rank unclassified Pseudomonadota 51 1 3
no rank unclassified Pseudomonas 1 37 30 4 4 2 1
no rank unclassified Pseudonocardia 7 5 2
no rank unclassified Pseudosulfitobacter 1
no rank unclassified Pseudotevenvirus 1
no rank unclassified Pseudovibrio 29 1
no rank unclassified Pseudoxanthomonas 1 1 1
no rank unclassified Psychrobacillus 2
no rank unclassified Psychrobacter 1 1 2
no rank unclassified Psychroflexus 2
no rank unclassified Psychromonas 1 1
no rank unclassified Puniceicoccaceae 1
no rank unclassified Pusillimonas 14 2 2
no rank unclassified Rahnella 9 4 1 1
no rank unclassified Ralstonia 1 10 4
no rank unclassified Raoultella 1
no rank unclassified Raoultibacter 3
no rank unclassified Rathayibacter 3 1
no rank unclassified Retroviridae 1
no rank unclassified Rheinheimera 1 4 1 1
no rank unclassified Rhizobium 4 18 5 2 1
no rank unclassified Rhodanobacteraceae 3
no rank unclassified Rhodobacter 3 3 2
no rank unclassified Rhodobiaceae 2 1
no rank unclassified Rhodoblastus 3
no rank unclassified Rhodococcus (in: high G+C Gram-positive bacteria) 33 2 2
no rank unclassified Rhodocyclaceae 2
no rank unclassified Rhodoferax 6 2
no rank unclassified Rhodophyticola 2
no rank unclassified Rhodopirellula 2
no rank unclassified Rhodoplanes 8 1 2
no rank unclassified Rhodospirillaceae 50 6
no rank unclassified Rhodospirillum 1
no rank unclassified Rhodothermaceae 17
no rank unclassified Rhodovulum 4 3 2
no rank unclassified Rickettsia 23
no rank unclassified Rickettsiales 4 4 2
no rank unclassified Rikenellaceae 3
no rank unclassified Riquetophycus 1
no rank unclassified Rivularia (in: cyanobacteria) 2
no rank unclassified Robinsoniella 125
no rank unclassified Romboutsia 88 1 2 2
no rank unclassified Roseburia 4 188 39 8 33 12 1 3 3 1
no rank unclassified Roseiflexus 25 1 2
no rank unclassified Roseimicrobium 36 2
no rank unclassified Roseivivax 11
no rank unclassified Roseomonas 1 1 1
no rank unclassified Roseovarius 3 1
no rank unclassified Rothia (in: high G+C Gram-positive bacteria) 50 13 4 1 1
no rank unclassified Rubritepida 1
no rank unclassified Ruegeria 1 1
no rank unclassified Rufibacter 14 1
no rank unclassified Ruficoccus 2
no rank unclassified Rugamonas 1
no rank unclassified Ruminiclostridium 2
no rank unclassified Ruminococcus 1 1 103 7 35 30 1 3 1
no rank unclassified Runella 10 1 2
no rank unclassified Ruthenibacterium 3
no rank unclassified Saccharina 1
no rank unclassified Saccharofermentans 1 1
no rank unclassified Saccharomyces 4
no rank unclassified Saccharopolyspora 21
no rank unclassified Saccharothrix 1
no rank unclassified Sagittula 19 1
no rank unclassified Salarchaeum 1
no rank unclassified Salegentibacter 4 1
no rank unclassified Salinarchaeum 1 1
no rank unclassified Salinibacterium 12 2
no rank unclassified Salinicoccus 29
no rank unclassified Salinisphaera 8 1 2
no rank unclassified Salipiger 5 3 1
no rank unclassified Salmonella 1 3 20 15 2 1
no rank unclassified Sanguibacter 13
no rank unclassified Saprospiraceae 7
no rank unclassified Sarcina 2 2
no rank unclassified Schaalia 19 2
no rank unclassified Scytonema 3
no rank unclassified Sedimentibacter 2 2
no rank unclassified Sediminibacterium 2
no rank unclassified Sediminicola 1 1
no rank unclassified Selenomonas 5 87 4 2
no rank unclassified Senegalimassilia 1
no rank unclassified Seonamhaeicola 3 2 1
no rank unclassified sequences 1 3
no rank unclassified Serratia (in: enterobacteria) 3 5 1 2
no rank unclassified Shewanella 2 2
no rank unclassified Shigella 1 2 2
no rank unclassified Shinella 3 21 4 1
no rank unclassified Shuttleworthella 1
no rank unclassified Sideroxydans 17
no rank unclassified Silvanigrellales 3
no rank unclassified Simiduia 1
no rank unclassified Sinimarinibacterium 40 1 1
no rank unclassified Sinomonas 10
no rank unclassified Sinorhizobium 8 2 1 1
no rank unclassified Skermanella 1
no rank unclassified Slackia 159 2
no rank unclassified Sobemovirus 1
no rank unclassified Sodalis 2
no rank unclassified Solibacillus 6 3 2
no rank unclassified Solimonas 33 2 1
no rank unclassified Solobacterium 7 2
no rank unclassified Sphaerotilus 1
no rank unclassified Sphingobacteriaceae 8 3
no rank unclassified Sphingobacterium 51 2 3
no rank unclassified Sphingobium 1 16 4 2 1
no rank unclassified Sphingomonas 10 24 4 2 1
no rank unclassified Sphingopyxis 2 6 2 2
no rank unclassified Sphingorhabdus 4 1 1
no rank unclassified Sphingosinicella 3 1
no rank unclassified Sphingosinithalassobacter 1
no rank unclassified Spiribacter 4 2
no rank unclassified Spiroplasma 1 1
no rank unclassified Spirosoma 60 1 2
no rank unclassified Spirosomataceae 5 3
no rank unclassified Spongiibacter 1 1
no rank unclassified Sporobacter 1
no rank unclassified Sporobacterium 1 6
no rank unclassified Sporosarcina 3 5 1 2
no rank unclassified Spounavirinae 1
no rank unclassified Stanieria 1 1
no rank unclassified Staphylococcus 1 167 11 3 2
no rank unclassified Stappia 4 1
no rank unclassified Starkeya 12 1
no rank unclassified Stella 9
no rank unclassified Stenotrophomonas 1 16 6 2 1 1
no rank unclassified Stenotrophomonas maltophilia group 1
no rank unclassified Sterolibacteriaceae 13 3
no rank unclassified Storeatula 1
no rank unclassified Streptacidiphilus 13 2 1
no rank unclassified Streptococcaceae 2
no rank unclassified Streptococcus 3 713 97 1 28 5 3 2 1
no rank unclassified Streptomonospora 6 1
no rank unclassified Streptomyces 80 1 6 2 1
no rank unclassified Streptomyces griseus subgroup 1
no rank unclassified Streptosporangium 17 1
no rank unclassified Subdoligranulum 2 3 29 3 1
no rank unclassified Succinivibrionaceae 2
no rank unclassified Sulfitobacter 9 3 2 1
no rank unclassified Sulfolobus 1
no rank unclassified Sulfuriferula 20
no rank unclassified Sulfurihydrogenibium 4 1 1
no rank unclassified Sulfurimonas 2
no rank unclassified Sulfurospirillum 3 2
no rank unclassified Sulfurovum 8 1 1
no rank unclassified Sutterella 118 3 3 13 1
no rank unclassified Sutterellaceae 3
no rank unclassified Suttonella 1
no rank unclassified Synechococcus 43 5 2
no rank unclassified Synechocystis 5
no rank unclassified Synergistes 1 1
no rank unclassified Synergistota 1
no rank unclassified Tamlana 1
no rank unclassified Tannerella 2 53 12 3 3 2 1
no rank unclassified Tenacibaculum 2 1
no rank unclassified Tepidibacter 1 2
no rank unclassified Tepidimonas 8
no rank unclassified Terasakiella 18 1 2
no rank unclassified Terrabacteria group 791 62 1
no rank unclassified Terribacillus 1 2
no rank unclassified Terrisporobacter 8 3
no rank unclassified Tessaracoccus 2 18 1 1
no rank unclassified Tetragenococcus 1
no rank unclassified Thalassococcus 3 1 1
no rank unclassified Thalassolituus 1
no rank unclassified Thalassotalea 1 1
no rank unclassified Thauera 47 4 1
no rank unclassified Thermaerobacter 76 2 2
no rank unclassified Thermoactinomycetaceae 1
no rank unclassified Thermoanaerobacter 2
no rank unclassified Thermoanaerobacterales 1
no rank unclassified Thermoanaerobacterium 68 1
no rank unclassified Thermococcus 5 1
no rank unclassified Thermodesulfobacterium 1 2
no rank unclassified Thermoleptolyngbya 1
no rank unclassified Thermoplasmata 1 1
no rank unclassified Thermoplasmatales 3 1
no rank unclassified Thermosporothrix 7
no rank unclassified Thermosynechococcus 2
no rank unclassified Thermotoga 1 1
no rank unclassified Thermus 1
no rank unclassified Thioalkalivibrio 8 1 1
no rank unclassified Thiobacillus 9
no rank unclassified Thiohalobacter 1
no rank unclassified Thiomonas 1
no rank unclassified Thiothrix 7 1
no rank unclassified Thomasclavelia 4 1
no rank unclassified Tidjanibacter 2
no rank unclassified Tissierella 4 2
no rank unclassified Tissierellia 1
no rank unclassified Trabyvirinae 4
no rank unclassified Treponema 28 1 2
no rank unclassified Tulasnella 1
no rank unclassified Turicibacter 6 96 11 4 3 2
no rank unclassified Tyzzerella 3 3
no rank unclassified Undibacterium 3 2
no rank unclassified Vagococcus 18 2 2
no rank unclassified Varibaculum 1 5 2
no rank unclassified Variovorax 14 4 2 1
no rank unclassified Veillonella 2 482 2 3 1 15 1 2 1
no rank unclassified Veillonellaceae 1 1
no rank unclassified Vequintavirus 1
no rank unclassified Verrucomicrobiia 1
no rank unclassified Verrucomicrobiota 60 1 2
no rank unclassified Verrucomicrobium 39
no rank unclassified Vibrio 1 2
no rank unclassified Victivallaceae 2
no rank unclassified Victivallales 86 1 1 1 2
no rank unclassified Victivallis 2
no rank unclassified Virgibacillus 40 4 2
no rank unclassified Viridibacillus 2
no rank unclassified viruses 2
no rank unclassified Vitreoscilla 1
no rank unclassified Vogesella 23 2
no rank unclassified Waltera 3 1
no rank unclassified Weissella 6
no rank unclassified Winogradskyella 7 4 2
no rank unclassified Wolbachia 1 1
no rank unclassified Xanthobacter 1
no rank unclassified Xylanimicrobium 3 1 1
no rank unclassified Yimella 1
no rank unclassified Yinghuangia 2
no rank unclassified Zhihengliuella 1 1
no rank unclassified Zoogloea 1
no rank unclassified Zunongwangia 1 2
no rank uncultured bacteria (human infant) ensemble 1
no rank uncultured phage cr10_1 8 2
no rank uncultured phage cr107_1 8 1
no rank uncultured phage cr11_1 8
no rank uncultured phage cr110_1 8
no rank uncultured phage cr115_1 8 1
no rank uncultured phage cr124_1 1
no rank uncultured phage cr3_1 8
no rank uncultured phage cr50_1 1 2
no rank uncultured phage cr53_1 8 1
no rank uncultured phage cr56_1 8
no rank Ureaplasma urealyticum serovar 10 1
no rank Verrucomicrobiota incertae sedis 1 17 1 2
no rank Xanthomonas campestris pv. campestris 1
no rank Xanthomonas campestris pv. cordiae 18
no rank Xanthomonas oryzae pv. oryzae 1
no rank Xanthomonas oryzae pv. oryzicola 1
no rank Xanthomonas translucens pv. cerealis 1
no rank Xanthomonas translucens pv. undulosa 1
no rank Zymobacter group 6 73 19 1 2
norank environmental samples 1
norank Klebsiella pneumoniae subsp. pneumoniae B5055 2
norank Methylothermaceae incertae sedis 1
norank Moorella group 1981 54 53 2 5 20 1 2
norank new name 50 38 6 9 1 2 3 1
norank new name 2 10
norank new name 2 5
norank new name 1 7
norank new name 7
norank Pending 1
norank Pending 4
norank Pending 1
norank Pending 3
norank Pending 2
norank Pending 1
norank Pending 1
norank Pending 1
norank Pending 4
norank Pending 4
norank Pending 3
norank Pending 4
norank Pending 3
norank Pending 1
norank Pending 4
norank Pending 1
norank Pending 1
norank Pending 3
norank Pending 4
norank Sporolactobacillaceae incertae sedis 11 18 1 2
norank unclassified Balneolaeota 12 4 2
norank unclassified Erysipelatoclostridium 1
norank unclassified Metakosakonia 1
norank unclassified Paracoccus 11 1
norank unclassified Pseudomonas 37 14 3 4 2 1
norank unclassified Schlegelella 2
order Acanthopleuribacterales 55 1
order Acaryochloridales 3 22 2 2
order Acholeplasmatales 4268 1109 61 264 2 14 6 8 6 1 2 1
order Acidaminococcales 4379 1439 564 274 44 22 22 31 24 19 10 6 7 4 4 3 2 1 1
order Acidiferrobacterales 16 191 4 2
order Acidilobales 3 1
order Acidimicrobiales 733 637 192 3 1 5 1 3 2
order Acidithiobacillales 39 230 1 1 2
order Acidothermales 62 9 1
order Acrospermales 1
order Actiniaria 35 16 1
order Actinomycetales 4563 1374 667 275 17 23 29 15 25 3 6 4 7 2 4 2 2 1
order Actinopolysporales 857 431 36 1 6 1
order Acytosteliales 1 1 2
order Aeromonadales 2182 534 22 272 9 4 1 24 4 2 1 2 2 1 1
order Agaricales 51
order Albuginales 1
order Algavirales 1 1
order Alteromonadales 3524 797 2 274 26 2 29 19 1 1 1 6 2 2 1
order Amarillovirales 1
order Anaerolineales 777 370 9 242 1 5 1 1 2
order Anaeroplasmatales 601 589 130 1 8 3 8 2 2 4 1 1
order Anaulales 1
order Apiales 1
order Aquificales 36 131 208 3 4 6 2 1
order Aquifoliales 10
order Archaeoglobales 3 2 4 2 1
order Architaenioglossa 291 1 1
order Ardenticatenales 27 209 3 1 1
order Armatimonadales 2 3 2
order Articulavirales 1
order Artiodactyla 1
order Asterales 1 22
order Atheriniformes 1
order Atribacterales 2
order Bacillales 4637 1539 486 275 35 33 20 32 31 7 10 3 7 2 3 2 1
order Bacillariales 2
order bacterial virus 2 10 1 1
order Bacteriovoracales 24 132 1 194 1 1 4 2
order Bacteroidales 4653 1543 788 288 74 35 32 32 31 27 15 11 7 6 4 4 3 2 1 1
order Balneolales 253 829 22 2 5 3 1 1 2
order Bangiales 1
order Batrachospermales 2
order Bdellovibrionales 72 139 1 235 1 3 1 1 2
order Bifidobacteriales 4586 1521 615 282 49 25 25 32 30 20 12 10 7 6 2 2 3 2 1 1
order Blastocatellales 67 1
order Boletales 4 1 1 1
order Botryosphaeriales 8 1
order Brachyspirales 43 13 252 1 5 1 2
order Bradymonadales 180 2 2
order Brassicales 1
order Brevinematales 6 1 2
order Bryobacterales 7 19 1 2 1 1 1 2
order Bryopsidales 1
order Bunyavirales 27
order Burkholderiales 4621 1492 733 275 42 35 28 25 31 22 15 7 7 6 4 4 2 2 1 1
order butyrate-producing bacterium SSC/2 1
order Caldicellulosiruptorales 4380 123 95 4 1 6 26 6 2
order Caldilineales 1490 609 56 2 3 2 7 2
order Caldisericales 3 9 10 1 1 1
order Calditrichales 1078 13 60 1 5 7 2
order Campylobacterales 2770 627 266 274 28 6 3 31 10 6 1 7 3 2 1 1
order Candidatus Absconditabacterales 1
order Candidatus Actinomarinales 5
order Candidatus Babeliales 3 3 1
order Candidatus Brocadiales 39 37 1 2 1
order Candidatus Cenarchaeales 11
order Candidatus Cloacimonadales 7 2 2
order Candidatus Comchoanobacterales 1
order Candidatus Desulfofervidales 1 1
order Candidatus Fermentimicrarchaeales 1
order Candidatus Gastranaerophilales 3 1 4
order Candidatus Izemoplasmatales 36 2
order Candidatus Methanoliparales 1
order Candidatus Nanohalobiales 1
order Candidatus Nanopelagicales 219 1 3 2 1
order Candidatus Nanosynbacterales 2 1 2
order Candidatus Nanosyncoccales 1
order Candidatus Pelagibacterales 7 184 1 1 1 2
order Candidatus Peribacterales 29
order Candidatus Prometheoarchaeales 1 2
order Candidatus Promineifilales 69 1 1
order Candidatus Saccharimonadales 7 1 2
order Candidatus Sulfidibacteriales 2
order Candidatus Sumerlaeales 14
order Candidatus Uabimicrobiales 1 1
order Cantharellales 1
order Cardiobacteriales 101 189 3 171 1 1 2
order Cardiopteridales 10
order Carnivora 11 16
order Caryophyllales 15 13 2 2
order Catenulisporales 1 4 24 5 2
order Caudata 5 1 1 2
order Caulobacterales 2270 244 9 272 2 5 15 3 1 1 2 1 1
order Cellvibrionales 376 349 270 1 5 1 2 1
order Ceramiales 1
order Chaetocerotales 1
order Chaetophorales 1
order Chaetothyriales 175 1 1 1
order Charadriiformes 14 13
order Chattonellales 1 1
order Chitinispirillales 19 1
order Chitinivibrionales 2
order Chitinophagales 2412 1237 5 270 1 5 5 13 1 1 6 3 1 1
order Chitovirales 3 1
order Chlamydiales 462 141 126 1 1 1 1 2 1 1
order Chlamydomonadales 2 1 2
order Chlorellales 1
order Chlorobiales 3912 120 268 5 5 23 2 2
order Chloroflexales 6 59 2 196 1 2 2
order Chloropicales 2
order Chlorosarcinales 1
order Christensenellales 4
order Chromatiales 4254 1019 3 272 3 1 5 20 6 2 2 1
order Chroococcales 3225 72 1 261 3 3 5 2 2 1
order Chroococcidiopsidales 7 55 1 2 1
order Chrysiogenales 900 25 95 1 1 2 1
order Chthoniobacterales 54 10
order Chthonomonadales 7 168 13 3
order Cladosporiales 1
order Coleofasciculales 37 14 25 2 1
order Coleoptera 3 9
order Compsopogonales 1
order Coprothermobacterales 79 113 7 4 2
order Coriobacteriales 4613 1437 781 275 41 33 23 32 22 2 15 5 7 6 4 4 3 2 1
order Corticiales 3 1
order Craspedida 2
order Crassvirales 10 8 4 3 1
order Cremevirales 3
order Cryppavirales 1
order Cryptosporangiales 5 2
order Cyanidiales 1
order Cyclophyllidea 3 1
order Cystofilobasidiales 1
order Cytophagales 4568 1321 7 271 4 11 5 24 1 6 4 3 2 1
order Dacrymycetales 3
order Deferribacterales 1447 153 1 243 5 5 8 4 2
order Deferrisomatales 45 1
order Dehalococcoidales 261 67 240 1 1 1 2
order Deinococcales 2271 190 6 270 1 1 6 12 1 4 2 1
order Desulfarculales 262 1 180 1 3 2
order Desulfatiglandales 32
order Desulfobaccales 3 28 6 1 1 2
order Desulfobacterales 1163 968 3 268 15 7 21 6 1 2 2 2 1
order Desulfobulbales 49 258 96 9 1 18 2 1
order Desulfomonilales 715 13 31 1 1 2
order Desulfovibrionales 4495 1325 646 272 58 31 20 31 29 21 12 9 7 6 4 4 3 2 1 1
order Desulfurellales 12 22 1 25 4 8 1 2
order Desulfuribacillales 9 1
order Desulfurobacteriales 30 47 1 2 1
order Desulfurococcales 5 2
order Desulfuromonadales 2526 214 1 270 16 1 18 13 1 5 2 1
order Dethiobacterales 750 12 1 2 1 5 2
order Diaporthales 1
order Dictyoglomales 138 39 2 2
order Dictyosteliales 1 2 2
order Diphyllobothriidea 2
order Diplomonadida 7 4
order Dissulfuribacterales 14
order Dixoniellales 1
order Dothideales 7
order Durnavirales 1
order Ectocarpales 1
order Eggerthellales 4556 1508 773 274 49 34 32 32 31 21 11 11 7 6 4 3 3 2 1 1
order Egibacterales 10 1 1
order Egicoccales 17 1 1
order Elusimicrobiales 39 83 7 1 1 2 2 2
order Emcibacterales 249 113 1 3 2
order Endomicrobiales 110 2 2
order Enterobacterales 4458 1364 597 277 58 33 26 31 31 22 14 7 7 6 3 3 2 1 1
order Entomoplasmatales 2119 683 267 1 6 5 2 2
order Entylomatales 2 1
order Ericales 11
order Erysipelotrichales 4646 1542 784 275 35 35 31 28 31 20 14 11 7 4 4 3 2 1 1
order Erysiphales 3
order Erythropeltidales 1
order Eubacteriales 4653 1543 790 288 73 35 32 32 31 27 15 11 7 6 4 4 3 2 1 1
order Eucoccidiorida 13 5 2 1
order Euglenales 1
order Euglyphida 1
order Eugregarinorida 1
order Eulipotyphla 2
order Eupodiscales 1
order Eurotiales 203 10 2 1 1 1
order Eustigmatales 1
order Eutreptiales 1
order Euzebyales 2726 150 64 1 1 1 2
order Exobasidiales 1 1
order Fabales 1081 11 2 2 1 1 3
order Fagales 1
order Ferrovales 3 1
order Fervidicoccales 1
order Fibrobacterales 334 277 187 183 2 1 2
order Filobasidiales 1
order Fimbriimonadales 8 73 37 3 2
order Flavobacteriales 4232 837 456 275 12 9 1 5 24 4 2 1 7 1 3 2 1
order Frankiales 9 38 3 235 1 5 2 1
order Fusobacteriales 2390 797 144 271 37 7 2 31 5 3 2 1 6 3 2 2 3 2 1
order Gadiformes 6
order Gaiellales 59 2
order Galdieriales 2 1
order Geitlerinematales 23 2 1
order Gemmatales 27 15 1 226 1 1 2
order Gemmatimonadales 17 53 1 231 3 1 2
order Geobacterales 253 84 96 5 5 4 1 2
order Geodermatophilales 52 137 1 118 4 2 1
order Georgefischeriales 1
order Gigartinales 1
order Gloeobacterales 21 184 1 1 1 2
order Gloeomargaritales 1
order Gloeophyllales 1
order Glomerales 2 1 2
order Glomerellales 104 2
order Glycomycetales 182 183 48 1 1 1 2
order Gomontiellales 2 125 4 3 3 2
order Gymnodiniales 1
order Haemosporida 5 2 1
order Halanaerobiales 927 701 1 267 3 6 10 5 2 3
order Haliangiales 426 44 35 3 3 1
order Halobacteriales 18 1 197 1 2 1 2
order Haloferacales 4 74 1 1 2
order Haloplasmatales 30 1 1 4
order Hapalidiales 1
order Helotiales 100 9 1
order Hemiptera 533 2 11 4 1 22
order Herpesvirales 54 1
order Herpetosiphonales 6 15 1
order Holophagales 2289 892 2 3
order Holosporales 4 1 65 1 1 3 2
order Hydrogenophilales 2421 259 6 15 1 14 1 2
order Hymenochaetales 1 1
order Hymenostomatida 1
order Hyphomicrobiales 3388 846 75 275 9 15 14 17 2 1 7 2 2 1
order Hyphomonadales 306 857 1 86 1 4 2 3 2 1
order Hypocreales 199 10 2 1 1
order Ignavibacteriales 50 975 1 167 4 15 4 6 2
order Immundisolibacterales 33 4 2
order Isochrysidales 1
order Isosphaerales 15 5 1 217 4 2 1
order Jakobida 1
order Jatrophihabitantales 12 8 1 2
order Jiangellales 56 21 93 4 1
order Kallotenuales 31
order Kangiellales 43 38 1 2
order Kiloniellales 1155 66 5
order Kineosporiales 65 119 19 1 2
order Kiritimatiellales 72 1 2
order Kitasatosporales 810 370 275 10 3 32 2 1 6 2 1 1
order Koleobacterales 2
order Kordiimonadales 252 2
order Kosmotogales 37 3 103 1 1 2
order Ktedonobacterales 22 74 1 2 1
order Lachnospirales 4
order Lactobacillales 4647 1543 786 284 65 35 32 32 31 25 15 11 7 6 4 4 3 2 1 1
order Lamiales 17
order Laminariales 1
order Lecanorales 5
order Lefavirales 1
order Legionellales 3230 143 2 263 1 5 16 3 2 2 1
order Lentisphaerales 6 2
order Lepidoptera 20
order Leptolyngbyales 1183 5 1 55 1 4 2 2
order Leptospirales 1285 82 235 4 5 1 2
order Leucosporidiales 1
order Limisphaerales 27 32 2
order Limnochordales 3 175 2 2
order Littorinimorpha 2
order Longamoebia 1 2 1
order Lysobacterales 4281 589 19 275 4 5 18 1 6 1 6 2 1
order Magnaporthales 16 8
order Magnetococcales 25 194 1 1 2
order Malasseziales 99 1
order Malvales 1
order Mamiellales 2
order Maricaulales 36 108 13 1 1 2
order Marinilabiliales 945 2 268 1 6 5 8 1 4 3 3 2
order Mariprofundales 51 1 148 1 1 2
order Mastigamoebida 3 1 2
order Mesoaciditogales 6 2
order Methanobacteriales 1138 325 220 200 34 2 3 22 7 4 9 1 1 6 2 2 2 1 1 1
order Methanocellales 34 2
order Methanococcales 1 80 9 12 2
order Methanomassiliicoccales 55 36 104 9 1 2 2
order Methanomicrobiales 6 3 1 164 5 5 2 1
order Methanosarcinales 7 2 191 9 17 2 1
order Methanotrichales 1 2 1 2
order Methylacidiphilales 35 3 1 1 2
order Methylococcales 19 301 1 266 3 5 1 1 2 1
order Microascales 1 1
order Micrococcales 2714 1259 224 275 16 25 22 31 10 7 3 2 7 1 2 2 1
order Micromonosporales 1400 400 1 268 1 6 5 1 1 6 2 1
order Micropepsales 16
order Microstromatales 1
order Miltoncostaeales 1 2
order Minwuiales 1
order Mixiales 1
order Monoglobales 3
order Monomastigales 1
order Mononegavirales 3
order Moorellales 3706 183 1 92 4 5 19 1 2
order Moraxellales 2551 695 21 98 22 7 4 31 19 14 5 1 6 2 2 1 1
order Mortierellales 1
order Motilibacterales 10
order Mucorales 17 1
order Mycobacteriales 2495 1001 464 276 32 11 13 31 20 8 6 4 2 2 1 2 2 1
order Mycoplasmatales 4003 1147 11 271 10 10 6 18 2 1 5 2 1
order Mycoplasmoidales 3622 819 11 35 9 6 4 2 2 1
order Mycosphaerellales 82 8 1
order Mytilinidiales 1
order Myxococcales 863 693 2 272 1 1 1 5 4 1 3 2 1
order Nakamurellales 2 157 4 2
order Nannocystales 263 27 1
order Nanoarchaeales 1
order Natranaerobiales 3769 65 50 2 7 2
order Natrialbales 3 117 1 1 2
order Nautiliales 7 55 179 1 2 2
order Naviculales 2
order Neisseriales 1519 364 69 274 10 11 5 11 16 4 3 1 7 4 1 2 2 1 1
order Nemaliales 1
order Neogastropoda 7
order Nephroselmidales 1
order Nevskiales 3555 196 2 227 1 2 13 2
order Nitriliruptorales 13 7 2
order Nitrosomonadales 2899 666 24 271 4 18 5 8 1 6 2 2 2
order Nitrosopumilales 8 8 11 1 1 1
order Nitrososphaerales 27 1
order Nitrospinales 15 16 2
order Nitrospirales 1087 73 1 250 1 5 6 2
order Nodosilineales 2 9 3 2
order Norzivirales 4
order Nostocales 4240 330 267 1 7 6 21 1 7 2 1
order Oceanospirillales 2890 1102 2 272 4 5 1 5 12 1 1 6 2 1 1
order Oculatellales 16 9 1 2
order Oedogoniales 1
order Oligoflexales 1
order Oligosphaerales 48 1
order Onygenales 28 1 2 1
order Opalinata 2 29 2 1 2 1
order Ophiostomatales 30 1
order Opitutales 32 55 250 2 1 4 1 1 1 2
order Orbales 13 140 1 5 2
order Ortervirales 43
order Orthoptera 1
order Oscillatoriales 2333 854 15 259 1 6 4 1 2 2 1
order Palmariales 1
order Parachlamydiales 452 64 148 1 2 2
order Parvularculales 26 1 2 1
order Pasteurellales 3805 1157 548 275 19 28 18 9 21 10 14 1 7 2 1 3 2 1
order Pavlovales 1
order Pelagomonadales 1
order Peltigerales 1
order Peniculida 1
order Peptostreptococcales 3 4 1
order Peronosporales 1
order Petitvirales 154 9 22 7
order Petrotogales 72 36 160 1 5 6 2
order Peyssonneliales 1
order Pezizales 1
order Phasmatodea 7 7 1 1 1
order Phototrophicales 2
order Phycisphaerales 2 103 2 1 2
order Piccovirales 9 1
order Picornavirales 3 1 1
order Pirellulales 7 102 220 1 2 1 2 1
order Piroplasmida 5 1
order Planctomycetales 23 128 1 266 1 4 1 2 1
order Pleosporales 193 1 2 1 1
order Pleurocapsales 7 5 31 1 2
order Poales 1
order Polyangiales 203 72 1 83 1 4 1 2
order Polyporales 111 1 1
order Primates 220 1 1
order Prochlorales 1
order Prochlorotrichales 9 14 3 2
order Propionibacteriales 657 991 118 275 10 15 9 25 4 2 6 1 2 1
order Prymnesiales 1
order Pseudanabaenales 1492 31 1 37 1 6 2 2 2
order Pseudomonadales 3036 970 65 275 27 19 3 31 10 1 11 4 7 3 2 1
order Pseudonocardiales 1222 490 271 3 5 4 1 4 3 1
order Pucciniales 1 1
order Puniceicoccales 2953 560 95 35 1 1 14 4 2 1
order Pyrenomonadales 2
order Rhabditida 2
order Rhizochromulinales 1
order Rhodellales 1
order Rhodobacterales 1117 978 5 273 1 4 1 5 5 1 1 7 2 2 1
order Rhodocyclales 2952 492 82 268 1 1 5 4 3 1 4 2 2 2 1
order Rhodospirillales 4132 1187 385 275 6 26 1 5 27 21 1 7 2 3 1 1
order Rhodothalassiales 70 18
order Rhodothermales 4324 296 88 2 6 5 6 1 2 1
order Rhodymeniales 8
order Rickettsiales 3230 312 1 260 1 1 5 12 6 2 2
order Rosales 1
order Rubrobacterales 35 138 227 3 4 5 2
order Russulales 2 1
order Saccharofermentanales 1
order Saccharomycetales 248 14 12 2 5 3
order Salinisphaerales 31 20 1 2
order Salmoniformes 1
order Sapindales 1
order Saprospirales 191 261 201 4 2 1 2
order Schizosaccharomycetales 3 8 6
order Sedimentisphaerales 207 1 4 2
order Selenomonadales 4615 1331 410 275 26 16 3 31 25 1 1 7 4 3 2 1
order Sepolyvirales 5
order Silvanigrellales 2 3
order Sneathiellales 11 1
order Sobelivirales 1
order Solanales 18 1
order Solirubrobacterales 50 71 66 3 1 2
order Sordariales 177 9 2
order Sphaerobacterales 35 95 2
order Sphaeropleales 1
order Sphingobacteriales 4648 752 16 272 8 23 5 30 4 1 7 4 3 2 1
order Sphingomonadales 1810 862 18 275 10 14 15 14 1 1 6 2 1
order Spirochaetales 1132 185 12 272 25 25 4 1 1 3 2
order Spirulinales 10
order Sporichthyales 22 15 59 1
order Sporidiobolales 11 1
order Stellavirales 1
order Streptosporangiales 2497 664 267 1 6 17 2 1 4 2 1 1
order Strigeidida 2
order Strongylida 5 2
order Stylonematales 1
order Sulfolobales 4 1 2
order Synchytriales 9 1
order Synechococcales 1573 47 2 270 1 3 6 6 1 2 2 1
order Synergistales 3718 662 237 269 3 1 1 13 20 2 1 4 7 2 3 1 1 1
order Syntrophales 735 90 70 1 5 1 1 1 2
order Syntrophobacterales 2559 509 5 249 3 1 4 14 2 2
order Syntrophorhabdales 30 1
order Synurales 1
order Taphrinales 1 1
order Tepidiformales 62 2
order Tepidisphaerales 1
order Terebratulida 2
order Terriglobales 707 293 103 265 3 4 1 2 2 2 1 1
order Terrimicrobiales 6
order Thermales 1484 103 1 262 1 5 1 5 2 1
order Thermoanaerobacterales 4544 728 220 270 26 6 28 27 7 2 2
order Thermoanaerobaculales 96
order Thermococcales 11 1 130 6 1 2
order Thermodesulfobacteriales 456 79 164 2 1 2 2 1
order Thermodesulfovibrionales 1082 27 10 4 2 6 2
order Thermofilales 2
order Thermoflexales 4
order Thermogemmatisporales 440 5 65 3 3
order Thermoleophilales 104 1 1
order Thermolithobacterales 71
order Thermomicrobiales 5 6 1 2
order Thermoplasmatales 21 21 1
order Thermoproteales 2 2 4 2 1 1
order Thermosediminibacterales 1804 94 254 1 2 3 6 2
order Thermotogales 157 16 258 1 5 6 2 1
order Thermotomaculales 16 1 2
order Thiohalobacterales 162 21 1 1
order Thiohalomonadales 10 44 3 1
order Thiohalorhabdales 2289 205 2 1
order Thiohalospirales 13
order Thiotrichales 3453 595 2 269 6 5 20 2 4 4 2 1 1
order Tichowtungiales 33 2
order Tissierellales 4532 1523 510 277 28 9 9 32 26 7 7 6 7 4 2 2 2 1
order Trebouxiales 1 1
order Tremellales 74 8 10
order Trichomonadida 1
order Trichosporonales 151 1
order Tritrichomonadida 1
order Trueperales 24 77 2
order Trypanosomatida 1 1
order Tubulavirales 12 12
order Ulvales 1
order unclassified Bacteroidetes Order II. 2296 270 1 248 2 7 4 6 1 2 1
order Unionida 609 1
order Ustilaginales 110 8 2
order Vampirovibrionales 67 1 3
order Veillonellales 4651 1538 743 275 30 31 27 31 25 13 13 6 7 6 4 4 3 2 1
order Venturiales 1
order Verrucomicrobiales 4076 1227 490 273 37 25 18 31 21 10 10 5 3 6 4 3 3 2 1 1
order Vibrionales 323 160 272 7 5 5 1 7 3 1
order Vicinamibacterales 43 1 3
order Victivallales 397 284 237 6 6 3 1 4 5 4 3 1
order Wallemiales 1
order Xylariales 10
order Zurhausenvirales 18
parvorder Catarrhini 43 1 1
parvorder Heteroneura 20
phylum Acidobacteriota 2591 1060 111 268 6 4 4 9 1 2 2 3 1 1
phylum Actinomycetota 4647 1543 790 287 69 35 32 32 31 26 15 11 7 6 4 4 3 2 1 1
phylum Apicomplexa 13 5 2 1 1
phylum Aquificota 36 143 233 3 4 6 2 1
phylum Armatimonadota 17 232 2 206 5 5 2
phylum Arthropoda 537 7 11 1 1 4 22 1
phylum Artverviricota 43
phylum Ascomycota 274 14 12 2 2 6 3 1
phylum Atribacterota 3 2
phylum Bacillariophyta 2
phylum Bacillota 4653 1543 790 289 75 35 32 32 31 28 15 11 7 6 4 4 3 2 1 1
phylum Bacteroidota 4653 1543 788 289 74 35 32 32 31 27 15 11 7 6 4 4 3 2 1 1
phylum Balneolota 253 829 86 2 11 4 1 19 1 2
phylum Basidiomycota 214 10 2 10 1 3 1
phylum Bdellovibrionota 71 140 1 94 1 1 4 1 1 2
phylum Brachiopoda 2
phylum Caldisericota 4 9 10 1 1 1
phylum Calditrichota 1082 13 60 1 5 7 2
phylum Campylobacterota 2770 686 266 274 28 9 3 31 17 6 1 7 3 2 1 1
phylum Candidatus Absconditabacteria 7 2 1 1
phylum Candidatus Bipolaricaulota 43 1
phylum Candidatus Cloacimonadota 15 2 2
phylum Candidatus Diapherotrites 1
phylum Candidatus Gracilibacteria 3 1
phylum Candidatus Korarchaeota 1
phylum Candidatus Lokiarchaeota 1 2
phylum Candidatus Melainabacteria 67 160 4 1 1 3 1 3
phylum Candidatus Methylomirabilota 22
phylum Candidatus Micrarchaeota 1
phylum Candidatus Nanohalarchaeota 1
phylum Candidatus Omnitrophota 7 1 2
phylum Candidatus Peregrinibacteria 31
phylum Candidatus Saccharibacteria 199 249 4 6 2 2 1
phylum Candidatus Sumerlaeota 14
phylum Candidatus Tectimicrobiota 5
phylum Candidatus Thermoplasmatota 55 36 24 9 1 2 2
phylum Candidatus Thorarchaeota 1
phylum Candidatus Woesebacteria 2
phylum Cercozoa 2 2 1
phylum Chlamydiota 462 141 245 1 2 1 1 2 1 1
phylum Chlorobiota 3912 120 1 269 5 5 23 2 2
phylum Chloroflexota 2481 1040 12 272 3 15 1 6 11 1 7 2 1
phylum Chlorophyta 2 1 2
phylum Chordata 5 241 1 2 20
phylum Chrysiogenota 900 25 96 1 1 2 1
phylum Chytridiomycota 43 1
phylum Ciliophora 1 1
phylum Cnidaria 35 2 1
phylum Coprothermobacterota 79 113 7 4 2
phylum Cossaviricota 33 1
phylum Cressdnaviricota 18 1
phylum Cyanobacteriota 4451 1086 31 273 12 17 6 24 1 6 1 7 6 4 2 2 1
phylum Deferribacterota 1447 153 1 245 5 5 8 4 2
phylum Deinococcota 2927 281 7 271 1 13 6 20 1 7 2 1
phylum Desulfobacterota 1
phylum Dictyoglomota 1 138 40 2 2
phylum Discosea 1 2 1
phylum Elusimicrobiota 39 102 7 167 1 19 2 22 2 1 7 2
phylum Euglenozoa 1 1
phylum Euryarchaeota 1164 356 229 216 36 18 3 24 17 4 9 1 7 6 2 2 2 1 1 1
phylum Evosea 3 1 2 2
phylum Fibrobacterota 334 301 187 185 4 14 1 31 24 7 2
phylum Fornicata 7 4
phylum Fusobacteriota 2394 797 145 272 41 7 2 31 5 3 2 1 6 3 2 2 3 2 1
phylum Gemmatimonadota 17 69 2 234 3 15 1 26 1 7 2
phylum Haptophyta 1 1
phylum Hofneiviricota 13 12
phylum Ignavibacteriota 50 975 2 221 5 15 4 6 1 2
phylum Kiritimatiellota 209 2 1 5 1 2
phylum Kitrinoviricota 3
phylum Lenarviricota 2 1
phylum Lentisphaerota 427 284 238 7 6 3 1 4 2 5 1 4 2 2 1
phylum Microsporidia 8
phylum Mollusca 841 1 1
phylum Mucoromycota 82 2 2
phylum Mycoplasmatota 4528 1412 167 274 24 26 1 6 26 23 2 1 6 6 4 3 2 2 1
phylum Myxococcota 858 693 2 97 1 1 1 5 4 1 3 2 1
phylum Nanoarchaeota 1
phylum Negarnaviricota 56 1
phylum Nematoda 5 2
phylum Nitrososphaerota 38 9 126 1 1 1 1
phylum Nitrospinota 15 16 2
phylum Nitrospirota 1091 73 1 251 1 5 2 1 6 2
phylum Nucleocytoviricota 19 1
phylum Oomycota 1
phylum Parabasalia 1 1
phylum Peploviricota 54 1
phylum Phixviricota 155 9 22 7
phylum Pisuviricota 3 1 1
phylum Planctomycetota 76 128 1 272 1 5 1 2 1 1
phylum Platyhelminthes 3 2
phylum Pseudomonadota 4653 1543 790 279 70 35 32 31 31 28 15 11 7 6 4 4 3 2 1 1
phylum Rhodophyta 4 2 11 8
phylum Rhodothermota 4324 296 64 2 6 5 6 1 1 2 1
phylum Spirochaetota 2066 265 16 273 28 25 5 1 1 2 3 2
phylum Streptophyta 1092 11 18 16 2 1 24 1 3 2
phylum Synergistota 3718 663 237 270 3 15 1 13 20 2 1 4 7 2 3 1 1 1
phylum Thermodesulfobacteriota 4571 1436 646 203 60 31 20 31 31 21 12 9 7 6 4 4 3 2 1 1
phylum Thermomicrobiota 44 55 1 1 2
phylum Thermoproteota 48 92 4 1 1 2 1 1
phylum Thermotogota 157 57 266 1 5 6 2 1
phylum Uroviricota 210 10 12 4 1
phylum Verrucomicrobiota 4360 1301 507 276 38 27 18 31 23 10 10 5 5 6 4 3 3 2 1 1
phylum Vulcanimicrobiota 2
phylum Zoopagomycota 3
QSV445 Bacteroides bouchesdurhonensis 1 1
QSV445 Citrobacter gillenii 1
RUCEZ877 Amulumruptor caecigallinarius 2
RUCEZ877 crAssphage cr6_1 2
RUCEZ877 Duncaniella muris 2
RUCEZ877 Microbacterium maritypicum 2
section Alternaria sect. Alternaria 1
section Alternaria sect. Porri 1
section Morchella sect. Distantes 1
section Silene sect. Elisanthe 2
section Talaromyces sect. Islandici 8
section Talaromyces sect. Talaromyces 2 1
section Talaromyces sect. Trachyspermi 1
serogroup Escherichia coli O119 2
serogroup Escherichia coli O121 3
serogroup Escherichia coli O145 9 3
serogroup Escherichia coli O157 9 3 3
serogroup Escherichia coli O177 3
serogroup Escherichia coli O26 3
serogroup Escherichia coli O3 3
serogroup Escherichia coli O43 1 2
serogroup Escherichia coli O78 3
serogroup Escherichia coli O86 3
serogroup Escherichia coli O91 3
serotype Escherichia coli H20 3
serotype Escherichia coli O1:H42 1 3
serotype Escherichia coli O1:HNT 3
serotype Escherichia coli O10:H32 3
serotype Escherichia coli O100:H21 3
serotype Escherichia coli O103:H2 3
serotype Escherichia coli O104:H4 1 3
serotype Escherichia coli O111:H- 3
serotype Escherichia coli O111:H8 3
serotype Escherichia coli O111:NM 3
serotype Escherichia coli O112ab:H8 3
serotype Escherichia coli O112ac:H19 3
serotype Escherichia coli O113:H21 3
serotype Escherichia coli O114:H49 3
serotype Escherichia coli O119:H6 3
serotype Escherichia coli O121:H19 9 2 3
serotype Escherichia coli O126:H45 1 3
serotype Escherichia coli O127:H27 2
serotype Escherichia coli O127:H6 1 3
serotype Escherichia coli O128ac:H12 3
serotype Escherichia coli O139:H28 5
serotype Escherichia coli O145:H25 3
serotype Escherichia coli O145:H28 3
serotype Escherichia coli O145:NM 1 3
serotype Escherichia coli O15:H18 3
serotype Escherichia coli O150:H6 3
serotype Escherichia coli O152:H23 3
serotype Escherichia coli O157:H- 3
serotype Escherichia coli O157:H43 3
serotype Escherichia coli O157:H7 9 2 3
serotype Escherichia coli O16:H6 3
serotype Escherichia coli O167:H26 1 3
serotype Escherichia coli O174:H21 3
serotype Escherichia coli O176:H45 3
serotype Escherichia coli O2:H6 3
serotype Escherichia coli O25:H1 3
serotype Escherichia coli O25:NM 3
serotype Escherichia coli O26:H11 3
serotype Escherichia coli O44:H18 8
serotype Escherichia coli O45:H2 3
serotype Escherichia coli O6:H16 2 3
serotype Escherichia coli O6:K2:H1 1
serotype Escherichia coli O7:H4 3
serotype Escherichia coli O7:K1 1
serotype Escherichia coli O78:H4 1
serotype Escherichia coli O8:H8 3
serotype Escherichia coli O89m:H10 3
serotype Escherichia coli O89m:H9 3
serotype Escherichia coli O9:H10 3
serotype Escherichia coli O99:H6 3
serotype Shigella dysenteriae 4 3
serotype Shigella flexneri 1a 3
serotype Shigella flexneri 1c 3
serotype Shigella flexneri 2a 3
serotype Shigella flexneri 2b 3
serotype Shigella flexneri 3a 3
serotype Shigella flexneri 4c 3
serotype Shigella flexneri 6 3
serotype Shigella flexneri 7b 3
serotype Shigella flexneri Y 3
serotype Streptococcus pyogenes serotype M12 43 1 1
serotype Streptococcus pyogenes serotype M4 27
species [Acidovorax] ebreus 18
species [Actinobacillus] rossii 1811 1 3
species [Bacillus] enclensis 1
species [Bacillus] solfatarensis 1
species [Bacteroides] pectinophilus 804 215 3 25 1 2
species [Candida] sp. VVT-2012 1
species [Clostridium] aminophilum 1344 1 5 2 1 1
species [Clostridium] cellulosi 1100 252 4 2 8
species [Clostridium] colinum 1331 11 3 1 1 9 2
species [Clostridium] fimetarium 483 1 1 4 4 2
species [Clostridium] herbivorans 402
species [Clostridium] hylemonae 1268 271 4 1 2 2 6 3
species [Clostridium] innocuum 1181 273 8 9 25 20 4 7 4 3 1
species [Clostridium] leptum 1386 5 6 17 23 9 7 4
species [Clostridium] methylpentosum 1338 3 10 9 2
species [Clostridium] nexile 1425 71 8 9 24 4 7 1
species [Clostridium] piliforme 26 2
species [Clostridium] polysaccharolyticum 1339 3 1 5
species [Clostridium] scindens 1239 274 32 2 14 25 8 5 3 3 3 1 1
species [Clostridium] symbiosum 1472 2 262 11 14 21 4 9 1 1
species [Clostridium] viride 1368 2 9
species [Collinsella] massiliensis 68 1 1 1
species [Desulfotomaculum] salinum 61
species [Enterobacter] lignolyticus 59 2 1
species [Eubacterium] brachy 691 6
species [Eubacterium] cellulosolvens 1455 7 9 5 9
species [Eubacterium] hominis 2 3
species [Eubacterium] infirmum 57 1 1
species [Eubacterium] minutum 106 245 1 4
species [Eubacterium] nodatum 414 4
species [Eubacterium] saphenum 352 1 1
species [Eubacterium] siraeum 1432 1 277 19 10 20 14 9 5 2 1
species [Eubacterium] sulci 299 262 7 13 6 2
species [Eubacterium] yurii 87
species [Haemophilus] ducreyi 7 116 1 1
species [Kluyvera] intestini 1
species [Lactobacillus] rogosae 1328 2 7 8 9 4
species [Leptolyngbya] sp. PCC 7376 1
species [Mannheimia] succiniciproducens 1
species [Mycobacterium] stephanolepidis 4
species [Mycoplasma] anseris 1
species [Mycoplasma] indiense 3
species [Mycoplasma] mobile 195 1 1
species [Pantoea] beijingensis 1
species [Pasteurella] aerogenes 6 13 1
species [Pasteurella] mairii 1
species [Phormidium] sp. ETS-05 1 2
Species [Propionibacterium] humerusii 13
species [Ruminococcus] lactaris 1256 2 43 8 27 25 2 1 9 4 3 1
species [Ruminococcus] torques 3389 1515 277 29 21 29 17 9 11 10 1 6 4 4 2 1 1
species [Synechococcus] sp. NIES-970 1 2
species Aaosphaeria arxii 1
species Abiotrophia defectiva 162 199 9 178 2 2 2
species Abiotrophia para-adiacens 5
species Abiotrophia sp. HMSC24B09 1
species Absiella argi 1
species Absiella sp. 1
species Absiella sp. AM22-9 1
species Absiella sp. AM27-20 1
species Absiella sp. AM29-15 1
species Absiella sp. AM54-8XD 3 1
species Absiella tortuosum 393
species Abyssalbus ytuae 2
species Abyssicoccus albus 43 1
species Abyssivirga alkaniphila 1
species Acanthamoeba castellanii 1 1
species Acanthamoeba comandoni 1
species Acanthamoeba culbertsoni 1
species Acanthopleuribacter pedis 55
species Acaromyces ingoldii 1 1
species Acaryochloris marina 3 11 2
species Accumulibacter sp. 86
species Acetanaerobacterium elongatum 777 3 6
species Acetanaerobacterium sp. 3
species Acetanaerobacterium sp. MSJ-12 4
species Acetatifactor muris 1422 1 3 1 6 1 1
species Acetatifactor sp. 2 4
species Acetatifactor sp. DFI.5.50 4
species Acetilactobacillus jinshanensis 16 3 1
species Acetitomaculum ruminis 1046 15 3 2
species Acetivibrio aldrichii 177 1
species Acetivibrio alkalicellulosi 4598 1250 5 2 7
species Acetivibrio cellulolyticus 141 1 3 3 4
species Acetivibrio clariflavus 698 570 1 251 2 6 5 2 1
species Acetivibrio ethanolgignens 1235 3 2 5
species Acetivibrio saccincola 204 1 3 2
species Acetivibrio sp. MSJd-27 1
species Acetivibrio straminisolvens 2252 2 1 3
species Acetivibrio thermocellus 160 244 2 4 1 2
species Acetoanaerobium noterae 2 4
species Acetoanaerobium pronyense 400 3
species Acetoanaerobium sticklandii 235 2 3 2 2 1
species Acetobacter aceti 1 91 1 1 2
species Acetobacter ascendens 4 2
species Acetobacter cerevisiae 4
species Acetobacter cibinongensis 10
species Acetobacter ghanensis 21
species Acetobacter indonesiensis 7
species Acetobacter malorum 7
species Acetobacter nitrogenifigens 1 10
species Acetobacter oeni 5
species Acetobacter orientalis 2 17 3
species Acetobacter orleanensis 2
species Acetobacter oryzoeni 2 1
species Acetobacter pasteurianus 26 13 1 1
species Acetobacter persici 27
species Acetobacter senegalensis 1
species Acetobacter sp. 1
species Acetobacter sp. 46_36 1
species Acetobacter sp. CAG:267 1
species Acetobacter tropicalis 20 1
species Acetobacter vaccinii 15
species Acetobacteraceae bacterium 126
species Acetobacterium bakii 1 3
species Acetobacterium fimetarium 401 2 6 1
species Acetobacterium malicum 11
species Acetobacterium sp. KB-1 207 1
species Acetobacterium submarinus 28
species Acetobacterium tundrae 45 6
species Acetobacterium wieringae 3
species Acetobacterium woodii 24 288 162 1 1 3
species Acetobacteroides hydrogenigenes 353
species Acetohalobium arabaticum 7 140 1 3 2
species Acetomicrobium mobile 1 2
species Acetomicrobium thermoterrenum 53
species Acetonema longum 378 2 1
species Acholeplasma equifetale 136 61
species Acholeplasma granularum 30
species Acholeplasma hippikon 1165 616 68 3 3 2
species Acholeplasma laidlawii 12 18 2 2
species Acholeplasma oculi 43
species Acholeplasma sp. KDA-feline 1
species Acholeplasmatales bacterium 2
species Achromatium oxaliferum 66
species Achromobacter anxifer 1
species Achromobacter arsenitoxydans 70 1
species Achromobacter denitrificans 1 104 3 1
species Achromobacter insolitus 6 45 1
species Achromobacter pestifer 11 1
species Achromobacter piechaudii 3
species Achromobacter ruhlandii 66 2
species Achromobacter sp. AONIH1 27 1 1
species Achromobacter sp. B7 32
species Achromobacter sp. MFA1 R4 5 1
species Achromobacter spanius 143 3 2
species Achromobacter xylosoxidans 1 208 1 7 1 2
species Acidaminobacter hydrogenoformans 1151 514 3 3 3
species Acidaminococcaceae bacterium 4
species Acidaminococcus fermentans 3078 90 22 262 9 1 23 2 3 3 1
species Acidaminococcus intestini 1251 394 76 255 13 21 4 3 3 1
species Acidaminococcus sp. BV3L6 31 1
species Acidaminococcus sp. D21 16
species Acidaminococcus sp. HPA0509 4
species Acidaminococcus timonensis 1
species Acidianus brierleyi 1 1
species Acidianus sp. HS-5 2
species Acidianus sulfidivorans 1
species Acidibacter ferrireducens 53
species Acidibrevibacterium fodinaquatile 1 2
species Acidicaldus organivorans 4
species Acidicapsa borealis 39 1
species Acidicapsa ligni 40
species Acididesulfobacillus acetoxydans 2
species Acidiferrobacter sp. SPIII_3 3 1
species Acidiferrobacter thiooxydans 10
species Acidihalobacter ferrooxydans 22
species Acidihalobacter prosperus 94
species Acidihalobacter yilgarnensis 2
species Acidilobus saccharovorans 1
species Acidilutibacter cellobiosedens 5 2
species Acidimicrobium ferrooxidans 1 6 1 1
species Acidiphilium acidophilum 73 3
species Acidiphilium angustum 1
species Acidiphilium cryptum 1 1
species Acidiphilium multivorum 1 1
species Acidiphilium symbioticum 8
species Acidipila rosea 1
species Acidipropionibacterium acidipropionici 1 77 4 9 2 1
species Acidipropionibacterium jensenii 120 1 1
species Acidipropionibacterium microaerophilum 35
species Acidipropionibacterium virtanenii 25 2
species Acidisarcina polymorpha 8 2
species Acidisoma sibiricum 2
species Acidisoma tundrae 17
species Aciditerrimonas ferrireducens 260 2
species Acidithiobacillus caldus 12 48 1 1
species Acidithiobacillus ferriphilus 1
species Acidithiobacillus ferrivorans 28 1 2
species Acidithiobacillus ferrooxidans 4 1 1
species Acidithiobacillus sp. YTS05 2
species Acidithiobacillus thiooxidans 2 1
species Acidobacteria bacterium Mor1 74
species Acidobacterium capsulatum 1 46 3 2
species Acidocella aluminiidurans 9 1
species Acidocella aminolytica 2 1
species Acidocella sp. MX-AZ03 2
species Acidothermus cellulolyticus 61 9 1
species Acidovorax carolinensis 27 1
species Acidovorax defluvii 1
species Acidovorax delafieldii 70 1
species Acidovorax facilis 18
species Acidovorax radicis 1
species Acidovorax sp. 1608163 31 2
species Acidovorax sp. HDW3 31
species Acidovorax sp. JMULE5 36
species Acidovorax sp. JS42 13
species Acidovorax sp. KKS102 25 1
species Acidovorax sp. LR05 1
species Acidovorax sp. RAC01 39 1
species Acidovorax sp. T1 21 1
species Acidovorax temperans 63
species Acidovorax wohlfahrtii 109 2 1
species Acinetobacter antiviralis 255
species Acinetobacter baumannii 33 25 4 90 5 3 1 1 1
species Acinetobacter baylyi 10 4 1
species Acinetobacter beijerinckii 21 1
species Acinetobacter bereziniae 6 1 1
species Acinetobacter bouvetii 41 1
species Acinetobacter calcoaceticus 9 1 8 7
species Acinetobacter chinensis 1 1
species Acinetobacter cumulans 1
species Acinetobacter defluvii 2 3 1
species Acinetobacter dispersus 1
species Acinetobacter equi 1 3 1
species Acinetobacter gerneri 30
species Acinetobacter guillouiae 85 1
species Acinetobacter gyllenbergii 10 1
species Acinetobacter haemolyticus 35 3
species Acinetobacter indicus 6 39 1 2
species Acinetobacter johnsonii 258 16 2 1 1
species Acinetobacter junii 7 12 1
species Acinetobacter kookii 42
species Acinetobacter kyonggiensis 52
species Acinetobacter lactucae 1
species Acinetobacter lanii 1
species Acinetobacter larvae 1 1
species Acinetobacter lwoffii 22 12 1 2
species Acinetobacter marinus 2 3
species Acinetobacter nosocomialis 3
species Acinetobacter oleivorans 17 1
species Acinetobacter parvus 13 1
species Acinetobacter pittii 16 3 1
species Acinetobacter pseudolwoffii 1
species Acinetobacter psychrotolerans 8
species Acinetobacter qingfengensis 2
species Acinetobacter radioresistens 7 6 14 8 13 2
species Acinetobacter rhizosphaerae 27
species Acinetobacter rudis 2
species Acinetobacter schindleri 20 8 17 1
species Acinetobacter seifertii 1 1
species Acinetobacter seohaensis 22 4
species Acinetobacter shaoyimingii 1 1
species Acinetobacter soli 1 2 3
species Acinetobacter sp. 1 3
species Acinetobacter sp. 10FS3-1 1
species Acinetobacter sp. 423D 1
species Acinetobacter sp. 81A1 1
species Acinetobacter sp. ACNIH1 1 3
species Acinetobacter sp. ACNIH2 1 4
species Acinetobacter sp. CAG:196 2
species Acinetobacter sp. CAG:196_36_41 2
species Acinetobacter sp. C-S-NA3 1
species Acinetobacter sp. HD5.2 3
species Acinetobacter sp. LoGeW2-3 1 3
species Acinetobacter sp. Marseille-Q1620 3 2
species Acinetobacter sp. MYb10 2
species Acinetobacter sp. N54.MGS-139 1
species Acinetobacter sp. NCu2D-2 1 1
species Acinetobacter sp. NEB 394 3
species Acinetobacter sp. NEB149 3
species Acinetobacter sp. RBE2CD-76 1
species Acinetobacter sp. S2(2009) 1
species Acinetobacter sp. SH20PTE14 1
species Acinetobacter sp. SR5.2 1
species Acinetobacter sp. SWBY1 2
species Acinetobacter sp. TGL-Y2 1 1
species Acinetobacter sp. TTH0-4 1 1
species Acinetobacter sp. WB22-23 1
species Acinetobacter sp. WCHA45 1 1
species Acinetobacter sp. WCHA55 3
species Acinetobacter sp. WCHAc010034 28 4 1
species Acinetobacter sp. WCHAc010052 1
species Acinetobacter suaedae 1
species Acinetobacter tandoii 2
species Acinetobacter tjernbergiae 23 1
species Acinetobacter towneri 1
species Acinetobacter ursingii 26 1 16 2
species Acinetobacter variabilis 1
species Acinetobacter venetianus 1 3 1 1
species Acinetobacter wanghuae 1
species Acinetobacter wuhouensis 11 1
species Acinetobacter xiamenensis 12
species Acrocarpospora corrugata 1
species Actibacter sediminis 1
species Actibacterium sp. EMB200-NS6 1 2
species Actimicrobium antarcticum 5
species Actinoallomurus luridus 4
species Actinoallomurus purpureus 1
species Actinoallomurus yoronensis 1
species Actinoalloteichus hoggarensis 12 1
species Actinoalloteichus hymeniacidonis 16 1 1
species Actinoalloteichus sp. AHMU CJ021 6
species Actinobacillus anseriformium 55
species Actinobacillus arthritidis 6
species Actinobacillus capsulatus 7 2
species Actinobacillus delphinicola 18 14 1 2
species Actinobacillus equuli 26 1 1
species Actinobacillus genomosp. 1 1
species Actinobacillus genomosp. 2 1
species Actinobacillus indolicus 1
species Actinobacillus lignieresii 1
species Actinobacillus minor 3 4 1
species Actinobacillus pleuropneumoniae 905 1 11 1 4 2
species Actinobacillus porcinus 2002 1 86 3 2 1 4
species Actinobacillus porcitonsillarum 1 12 1
species Actinobacillus scotiae 194
species Actinobacillus succinogenes 167 25
species Actinobacillus suis 8 1 1
species Actinobacteria bacterium IMCC19121 1
species Actinobacteria bacterium IMCC25003 2 3
species Actinobacteria bacterium IMCC26077 1 1
species Actinobacteria bacterium IMCC26256 4
species Actinobacteria bacterium YIM 96077 10 1
species Actinobaculum massiliense 18 13 7
species Actinobaculum sp. 313 48 1 2
species Actinobaculum sp. oral taxon 183 7 1
species Actinobaculum suis 251 3
species Actinocatenispora rupis 291 86 1
species Actinocatenispora sera 1
species Actinocatenispora thailandica 115 1 1 1
species Actinocorallia aurantiaca 2
species Actinocorallia cavernae 1
species Actinocorallia glomerata 2
species Actinocorallia herbida 19 2
species Actinokineospora diospyrosa 1
species Actinokineospora inagensis 18 3
species Actinomadura atramentaria 3
species Actinomadura coerulea 1
species Actinomadura graeca 1
species Actinomadura hibisca 8
species Actinomadura latina 39
species Actinomadura luteofluorescens 2
species Actinomadura macra 1
species Actinomadura madurae 1
species Actinomadura maheshkhaliensis 2 2
species Actinomadura miaoliensis 1 3
species Actinomadura oligospora 1
species Actinomadura rudentiformis 2
species Actinomadura sediminis 2
species Actinomadura sp. NAK00032 17 2
species Actinomadura sp. WMMA1423 21
species Actinomadura sp. WMMB 499 10 2
species Actinomadura verrucosospora 2 1 25
species Actinomadura vinacea 8
species Actinomadura viridilutea 4
species Actinomarinicola tropica 80 2
species Actinomyces bouchesdurhonensis 3 1
species Actinomyces bovis 1
species Actinomyces bowdenii 9 3 3
species Actinomyces capricornis 2
species Actinomyces dentalis 21 7 4 2
species Actinomyces denticolens 113
species Actinomyces faecalis 1 2
species Actinomyces gaoshouyii 14 1 2
species Actinomyces genomosp. C1 1
species Actinomyces gerencseriae 8 1 3 1 1
species Actinomyces graevenitzii 142 44 2 20 6 1 1
species Actinomyces howellii 71 2
species Actinomyces israelii 2 110 1
species Actinomyces johnsonii 7
species Actinomyces lilanjuaniae 35 1
species Actinomyces lingnae 704 1 7
species Actinomyces marmotae 21 1 2
species Actinomyces massiliensis 5 4
species Actinomyces naeslundii 161 2 14 1 2 1 2
species Actinomyces oricola 1
species Actinomyces oris 45 173 2 3 1 2
species Actinomyces pacaensis 243 1 1 2
species Actinomyces procaprae 65 4 2
species Actinomyces qiguomingii 111 1 2
species Actinomyces radicidentis 75 2
species Actinomyces respiraculi 1 2
species Actinomyces ruminicola 83 3
species Actinomyces slackii 8 62 1 2
species Actinomyces sp. 4
species Actinomyces sp. 2002-2301122 81
species Actinomyces sp. 432 74 1
species Actinomyces sp. Chiba101 50 1 1
species Actinomyces sp. HMSC035G02 1
species Actinomyces sp. HPA0247 1
species Actinomyces sp. ICM34 2
species Actinomyces sp. ICM39 15 3
species Actinomyces sp. ICM41 14
species Actinomyces sp. ICM47 1 4 14 4
species Actinomyces sp. ICM54 43 1
species Actinomyces sp. ICM58 31 3 4
species Actinomyces sp. Marseille-P3109 1
species Actinomyces sp. oral strain B19SC 1
species Actinomyces sp. oral strain Hal-1065 9
species Actinomyces sp. oral strain Hal-1083 3
species Actinomyces sp. oral taxon 169 228 1
species Actinomyces sp. oral taxon 170 1
species Actinomyces sp. oral taxon 171 220 2
species Actinomyces sp. oral taxon 172 1
species Actinomyces sp. oral taxon 175 6
species Actinomyces sp. oral taxon 180 1
species Actinomyces sp. oral taxon 414 207 1 1
species Actinomyces sp. oral taxon 448 5
species Actinomyces sp. oral taxon 848 137
species Actinomyces sp. oral taxon 897 88 1
species Actinomyces sp. ph3 64 2
species Actinomyces sp. S4-C9 21
species Actinomyces sp. S5-BM9 3
species Actinomyces sp. S6-Spd3 1 53 1
species Actinomyces sp. S8 AA1-3 1
species Actinomyces sp. S9 HS-9 4
species Actinomyces sp. S9 PR-21 5
species Actinomyces sp. Z16 11 1 1
species Actinomyces sp. Z5 1
species Actinomyces sp. zg-332 2
species Actinomyces sp. ZSY-1 1
species Actinomyces succiniciruminis 33
species Actinomyces timonensis 2
species Actinomyces viscosus 72 167 1 6 1
species Actinomyces weissii 1 2
species Actinomyces wuliandei 25 2 2
species Actinomycetaceae bacterium 1 1
species Actinomycetes bacterium 4
species Actinomycetospora lutea 1
species Actinophytocola algeriensis 1
species Actinoplanes cyaneus 1
species Actinoplanes derwentensis 18 1
species Actinoplanes ianthinogenes 1
species Actinoplanes missouriensis 1 14 1
species Actinoplanes pallidoaurantiacus 13
species Actinoplanes penicillatus 1
species Actinoplanes philippinensis 139
species Actinoplanes sp. L3-i22 1 2
species Actinoplanes sp. N902-109 17 1 2
species Actinoplanes sp. OR16 20 1 2
species Actinoplanes teichomyceticus 10 1
species Actinopolymorpha alba 4 2
species Actinopolymorpha rutila 205
species Actinopolymorpha singaporensis 18 1
species Actinopolyspora alba 4
species Actinopolyspora erythraea 3 36 1 1
species Actinopolyspora indiensis 1
species Actinopolyspora mortivallis 1
species Actinorugispora endophytica 2
species Actinosynnema pretiosum 2 1 1
species Actinotalea sp. JY-7876 9
species Actinotignum schaalii 48 26 28 117 1 2
species Actinotignum urinale 1 65 1
species Acutalibacter muris 9 1
species Acutalibacter sp. 3
species Acuticoccus sp. I52.16.1 1 2
species Acytostelium subglobosum 1
species Adhaeretor mobilis 2
species Adhaeribacter aerophilus 21
species Adhaeribacter aquaticus 1
species Adhaeribacter radiodurans 15 2
species Adhaeribacter swui 1
species Adhaeribacter terreus 3
species Adlercreutzia caecimuris 28 1 11
species Adlercreutzia equolifaciens 2852 528 270 17 3 26 27 4 6 3 2
species Adlercreutzia hattorii 263 9 19 2 2
species Adlercreutzia mucosicola 7 4 2 9
species Adlercreutzia muris 4 1
species Adlercreutzia rubneri 1
species Adlercreutzia sp. 2
species Adlercreutzia sp. DFI.6.23 2
species Advenella faeciporci 6
species Advenella kashmirensis 4 1
species Advenella mimigardefordensis 42 3 2
species Aedoeadaptatus coxii 4173 430 19 1 3 6 1
species Aedoeadaptatus ivorii 29 43 254 1 2
species Aegicerativicinus sediminis 1 2
species Aeoliella mucimassa 3 1 2
species Aequoribacter fuscus 1
species Aequorivita echinoideorum 1
species Aequorivita lipolytica 1
species Aequorivita sp. H23M31 6 1 2
species Aequorivita sublithincola 1 4 1 2
species Aeribacillus pallidus 29 15 2 2
species Aeriscardovia aeriphila 239
species Aerococcus christensenii 26 5 10 142 2 1 2
species Aerococcus sanguinicola 3 56 1 2
species Aerococcus suis 3
species Aerococcus urinae 8 216 6 131 4 2
species Aerococcus urinaeequi 5 1 3 2
species Aerococcus urinaehominis 32 2
species Aerococcus vaginalis 88
species Aerococcus viridans 5 2 20 1
species Aeromicrobium alkaliterrae 2
species Aeromicrobium chenweiae 6
species Aeromicrobium choanae 18 1
species Aeromicrobium erythreum 1 15 1
species Aeromicrobium ginsengisoli 1
species Aeromicrobium kwangyangensis 1
species Aeromicrobium marinum 5 1
species Aeromicrobium ponti 31 3
species Aeromicrobium senzhongii 1
species Aeromicrobium sp. A1-2 11
species Aeromicrobium sp. IARI-CL7 1
species Aeromicrobium yanjiei 12
species Aeromonas caviae 43 1 1 2 2
species Aeromonas dhakensis 1 2
species Aeromonas encheleia 8 1 1
species Aeromonas enteropelogenes 1
species Aeromonas eucrenophila 28
species Aeromonas hydrophila 16 202 1 1 2
species Aeromonas media 53 1
species Aeromonas phage AP1 1
species Aeromonas rivipollensis 1
species Aeromonas rivuli 1
species Aeromonas salmonicida 142 5 81 3 3 2
species Aeromonas sanarellii 1
species Aeromonas schubertii 65 2 2
species Aeromonas simiae 1 93 1 1
species Aeromonas sobria 6
species Aeromonas sp. 15m 1
species Aeromonas sp. 19m 2
species Aeromonas sp. 2692-1 3
species Aeromonas sp. ASNIH1 1 1
species Aeromonas sp. ASNIH2 1 1
species Aeromonas sp. ASNIH7 1
species Aeromonas sp. B11 1
species Aeromonas sp. CA23 5
species Aeromonas sp. CU5 5 1
species Aeromonas sp. HZM 1
species Aeromonas sp. WP2-W18-CRE-05 1
species Aeromonas veronii 255 1 2 1 2
species Aerosphaera taetra 48
species Aerosticca soli 9 3 2
species Aestuariispira ectoiniformans 1 1
species Aestuariispira insulae 557
species Afifella pfennigii 1
species Afipia carboxidovorans 1 1
species Afipia massiliensis 1
species Afipia sp. GAS231 19 3
species Africanella massiliensis 1
species Agaribacter marinus 343
species Agaricus bisporus 1
species Agarilytica rhodophyticola 1 2 1
species Agarivorans albus 10
species Agarivorans gilvus 4 3 2 2
species Agarivorans litoreus 8
species Agathobacter rectalis 1449 277 16 29 19 8 12 6 6 4
species Agathobacter ruminis 15 1 1
species Agathobacter sp. 4
species Agathobaculum butyriciproducens 9 11 11 4 1
species Agathobaculum desmolans 1505 1 7 8 16 9 2 1
species Agathobaculum faecis 2 1
species Agathobaculum hominis 4 1
species Agathobaculum massiliense 1
species Agathobaculum sp. Marseille-P7918 1 1
species Aggregatibacter actinomycetemcomitans 1 208 82 5 2
species Aggregatibacter aphrophilus 230 111 154 158 1 2 1 1 7 1 1 2
species Aggregatibacter pneumotropica 23
species Aggregatibacter segnis 254 13 47 94 2 1 1 4 1 1 1
species Aggregatibacter sp. 2125159857 1
species Aggregatibacter sp. Marseille-P9115 1
species Aggregatibacter sp. oral taxon 458 1
species Aggregatibacter sp. oral taxon 513 1
species Aggregatimonas sangjinii 18 2
species Aggregicoccus edonensis 2
species Agitococcus lubricus 2
species Agreia bicolorata 2
species Agreia sp. COWG 1
species Agrilactobacillus composti 184
species Agrobacterium albertimagni 7
species Agrobacterium fabrum 3 3 2
species Agrobacterium larrymoorei 15 24 1
species Agrobacterium pusense 2
species Agrobacterium rubi 1
species Agrobacterium salinitolerans 1
species Agrobacterium sp. CGMCC 11546 1
species Agrobacterium sp. T29 2
species Agrobacterium tumefaciens 32 250 1 3 1
species Agrobacterium viscosum 19
species Agrobacterium vitis 171 3 2
species Agrococcus carbonis 19 1
species Agrococcus citreus 2
species Agrococcus jejuensis 1 8 1
species Agrococcus jenensis 1
species Agrococcus pavilionensis 1
species Agrococcus sp. SCSIO52902 1
species Agrococcus sp. SGAir0287 10
species Agrococcus terreus 29 1
species Agrococcus versicolor 49
species Agromyces atrinae 1
species Agromyces aureus 19 1 1
species Agromyces badenianii 7 1
species Agromyces bracchium 2
species Agromyces flavus 10
species Agromyces hippuratus 6
species Agromyces intestinalis 10
species Agromyces italicus 5
species Agromyces laixinhei 10 1
species Agromyces larvae 1 1
species Agromyces protaetiae 6 1 2
species Agromyces ramosus 1
species Agromyces rhizosphaerae 117 1
species Agromyces salentinus 797 1 1 1
species Agromyces sp. H17E-10 1 1
species Agromyces sp. LHK192 8 1
species Agromyces succinolyticus 2
species Agromyces terreus 6
species Agromyces ulmi 2
species Ahniella affigens 8 1 2
species Ahrensia kielensis 1
species Akkermansia glycaniphila 211 1 2
species Akkermansia massiliensis 1
species Akkermansia muciniphila 3900 1161 271 273 34 4 14 31 9 5 4 2 6 4 2 3 2 1 1
species Akkermansia sp. 3
species Akkermansia sp. 54_46 1
species Akkermansia sp. aa_0143 1
species Akkermansia sp. B2-R-115 1
species Akkermansia sp. BIOML-A1 1
species Akkermansia sp. BIOML-A10 1
species Akkermansia sp. BIOML-A11 1
species Akkermansia sp. BIOML-A12 1
species Akkermansia sp. BIOML-A13 1
species Akkermansia sp. BIOML-A14 1
species Akkermansia sp. BIOML-A15 1
species Akkermansia sp. BIOML-A16 1
species Akkermansia sp. BIOML-A17 1
species Akkermansia sp. BIOML-A18 1
species Akkermansia sp. BIOML-A19 1
species Akkermansia sp. BIOML-A2 1
species Akkermansia sp. BIOML-A20 1
species Akkermansia sp. BIOML-A21 1
species Akkermansia sp. BIOML-A22 1
species Akkermansia sp. BIOML-A23 1
species Akkermansia sp. BIOML-A24 1
species Akkermansia sp. BIOML-A25 1
species Akkermansia sp. BIOML-A26 1
species Akkermansia sp. BIOML-A27 1
species Akkermansia sp. BIOML-A28 1
species Akkermansia sp. BIOML-A29 1
species Akkermansia sp. BIOML-A3 1
species Akkermansia sp. BIOML-A30 1
species Akkermansia sp. BIOML-A31 1
species Akkermansia sp. BIOML-A32 1
species Akkermansia sp. BIOML-A33 1
species Akkermansia sp. BIOML-A34 1
species Akkermansia sp. BIOML-A35 1
species Akkermansia sp. BIOML-A36 1
species Akkermansia sp. BIOML-A37 1
species Akkermansia sp. BIOML-A38 1
species Akkermansia sp. BIOML-A39 1
species Akkermansia sp. BIOML-A4 1
species Akkermansia sp. BIOML-A40 1
species Akkermansia sp. BIOML-A41 2 1
species Akkermansia sp. BIOML-A42 1
species Akkermansia sp. BIOML-A43 1
species Akkermansia sp. BIOML-A44 1
species Akkermansia sp. BIOML-A45 1
species Akkermansia sp. BIOML-A46 1
species Akkermansia sp. BIOML-A47 1
species Akkermansia sp. BIOML-A48 1
species Akkermansia sp. BIOML-A49 1
species Akkermansia sp. BIOML-A5 1
species Akkermansia sp. BIOML-A50 1
species Akkermansia sp. BIOML-A51 1
species Akkermansia sp. BIOML-A52 1
species Akkermansia sp. BIOML-A53 1
species Akkermansia sp. BIOML-A54 1
species Akkermansia sp. BIOML-A55 1
species Akkermansia sp. BIOML-A56 1
species Akkermansia sp. BIOML-A57 1
species Akkermansia sp. BIOML-A58 1
species Akkermansia sp. BIOML-A59 1
species Akkermansia sp. BIOML-A6 1
species Akkermansia sp. BIOML-A60 1
species Akkermansia sp. BIOML-A61 3 1
species Akkermansia sp. BIOML-A62 1
species Akkermansia sp. BIOML-A63 1
species Akkermansia sp. BIOML-A64 1
species Akkermansia sp. BIOML-A65 1
species Akkermansia sp. BIOML-A66 1
species Akkermansia sp. BIOML-A67 1
species Akkermansia sp. BIOML-A7 1
species Akkermansia sp. BIOML-A8 1
species Akkermansia sp. BIOML-A9 1
species Akkermansia sp. CAG:344 1
species Akkermansia sp. GGCC_0220 1
species Akkermansia sp. Phil8 1
species Akkermansia sp. UBA5128 1
species Akkermansia sp. UNK.MGS-1 1
species Albibacterium bauzanense 1
species Albidovulum inexpectatum 1
species Albimonas donghaensis 11
species Albugo laibachii 1
species Alcaligenaceae bacterium SJ-26 31
species Alcaligenes aquatilis 10 1 1
species Alcaligenes faecalis 1 215 1 2 1
species Alcaligenes sp. D16 2
species Alcanivorax sp. ALC70 1 2
species Alcanivorax sp. N3-2A 24 1
species Alcyoneusvirus RaK2 1
species Algibacter psychrophilus 3
species Algibacter sp. L1A34 2
species Algibacter sp. L3A6 2
species Algicella marina 14
species Algicola bacteriolytica 63
species Algimonas ampicilliniresistens 1
species Algimonas porphyrae 33
species Algiphilus aromaticivorans 49
species Algivirga pacifica 4
species Algorimarina butyrica 3
species Algoriphagus machipongonensis 1
species Algoriphagus mannitolivorans 6
species Algoriphagus marincola 8
species Algoriphagus namhaensis 2
species Algoriphagus olei 4
species Algoriphagus sanaruensis 37 1 3 2
species Algoriphagus sp. NBT04N3 2
species Algoriphagus sp. Y33 2
species Algoriphagus terrigena 2
species Algoriphagus zhangzhouensis 19
species Aliamphritea ceti 1
species Aliarcobacter butzleri 7 1 1 3 5 2
species Aliarcobacter cibarius 2 1
species Aliarcobacter cryaerophilus 23 9 2 2
species Aliarcobacter faecis 1 1
species Aliarcobacter lanthieri 1 1
species Aliarcobacter skirrowii 128 3 1 2 1 2
species Aliarcobacter thereius 5 4
species Aliarcobacter trophiarum 1 1
species Alicycliphilus denitrificans 14 4 69 1 1
species Alicyclobacillus acidiphilus 62
species Alicyclobacillus acidocaldarius 190 1 3 2
species Alicyclobacillus acidoterrestris 1 2
species Alicyclobacillus aeris 4
species Alicyclobacillus cellulosilyticus 3
species Alicyclobacillus contaminans 25
species Alicyclobacillus cycloheptanicus 2 2
species Alicyclobacillus dauci 2
species Alicyclobacillus disulfidooxidans 1
species Alicyclobacillus fastidiosus 1 1 2
species Alicyclobacillus ferrooxydans 2
species Alicyclobacillus herbarius 26 2 2
species Alicyclobacillus mengziensis 2
species Alicyclobacillus pomorum 11
species Alicyclobacillus sp. ALC3 2
species Alicyclobacillus sp. SO9 2
species Alicyclobacillus sp. TC 2
species Alicyclobacillus tolerans 8
species Alienimonas californiensis 43 1
species Aliicoccus persicus 3
species Aliidiomarina maris 21
species Aliidongia dinghuensis 1
species Aliiroseovarius crassostreae 2
species Aliivibrio fischeri 1 2
species Aliivibrio salmonicida 1 1
species Aliivibrio wodanis 2 1
species Alishewanella fetalis 86 65
species Alishewanella tabrizica 4
species Alistipes communis 29 3 268 17 8 28 5 8 4 3 1
species Alistipes dispar 269 9 28 1 3 3
species Alistipes finegoldii 1015 531 275 27 6 23 32 9 21 4 7 4 3 1
species Alistipes hominis 2
species Alistipes ihumii 15 5 19 10 2 9 9 4 3
species Alistipes indistinctus 1211 335 270 13 15 27 5 14 4 4 3 2 1
species Alistipes inops 108 4 5 4 8 2 1
species Alistipes massiliensis 109 3 7 4 2
species Alistipes megaguti 270 9 32 3
species Alistipes obesi 882 2 10 4 20 1 1
species Alistipes onderdonkii 1208 13 273 29 24 28 5 3 8 4 3
species Alistipes provencensis 1 1
species Alistipes putredinis 1212 557 172 22 5 26 12 6 17 4 7 4 1 1
species Alistipes senegalensis 29 3 5 2 19 2 1 6 1 2 3
species Alistipes shahii 1128 498 269 17 5 25 29 8 19 8 7 3 3 1
species Alistipes sp. 4
species Alistipes sp. 56_11 2
species Alistipes sp. 56_sp_Nov_56_25 3
species Alistipes sp. AF14-19 6 3 3
species Alistipes sp. AF17-16 2
species Alistipes sp. AF48-12 2
species Alistipes sp. AL-1 8 4
species Alistipes sp. AM16-43 1 4
species Alistipes sp. CAG:157 2
species Alistipes sp. CAG:268 1
species Alistipes sp. CAG:29 4
species Alistipes sp. CAG:53 3
species Alistipes sp. cv1 2 2
species Alistipes sp. DJF_B185 7
species Alistipes sp. dk3620 2
species Alistipes sp. dk3624 262 8 27 2 3
species Alistipes sp. EBA6-25cl2 258
species Alistipes sp. HGB5 3 71 13 3
species Alistipes sp. Marseille-P2263 3
species Alistipes sp. N15.MGS-157 2
species Alistipes sp. NML05A004 421 1
species Alistipes sp. RMA 9912 3 93
species Alistipes sp. S457 4
species Alistipes sp. UBA1686 4
species Alistipes sp. UBA1825 4
species Alistipes sp. Zagget8 1
species Alistipes timonensis 1 1 13 7 2
species Alkalibacillus haloalkaliphilus 14
species Alkalibacillus salilacus 235
species Alkalibacter rhizosphaerae 2
species Alkalibacter saccharofermentans 147 2 1
species Alkalibacterium subtropicum 13 1
species Alkalibaculum bacchi 383 1 2
species Alkalicella caledoniensis 2
species Alkalicoccobacillus gibsonii 1
species Alkalicoccobacillus plakortidis 4
species Alkalicoccus chagannorensis 30
species Alkalicoccus daliensis 2
species Alkalicoccus luteus 20
species Alkalidesulfovibrio alkalitolerans 5 84
species Alkaliflexus imshenetskii 67 2
species Alkalihalobacillus alcalophilus 1
species Alkalihalobacillus sp. LMS39 2
species Alkalihalobacillus sp. LMS6 1 2
species Alkalihalobacillus trypoxylicola 15
species Alkalihalobacterium bogoriense 22
species Alkalihalophilus marmarensis 2
species Alkalihalophilus pseudofirmus 3 2 67 2 2
species Alkalilimnicola ehrlichii 74 1 1
species Alkalimarinus sediminis 18 1
species Alkaliphilus crotonatoxidans 4510 3 3 7
species Alkaliphilus halophilus 1
species Alkaliphilus metalliredigens 52 125 185 2 3 1 2
species Alkaliphilus oremlandii 1 224 1 2 2
species Alkaliphilus peptidifermentans 476 28 2
species Alkaliphilus sp. B6464 1 2
species Alkaliphilus transvaalensis 24
species Alkalispirochaeta alkalica 1
species Alkalitalea saponilacus 177 1 2
species Alkalithermobacter paradoxus 2832 110 3
species Alkalithermobacter thermoalcaliphilus 2439 958 2
species Alkanibacter difficilis 1
species Alkanindiges illinoisensis 2
species Allisonella histaminiformans 320 67 3 2 3 1
species Alloacidobacterium dinghuense 1
species Alloactinosynnema sp. L-07 25 5 2
species Alloalcanivorax balearicus 4
species Alloalcanivorax dieselolei 1 12 1 2
species Alloalcanivorax venustensis 1
species Alloalcanivorax xenomutans 13 2
species Allobacillus halotolerans 2
species Allobaculum mucilyticum 2
species Allobaculum sp. Allo2 2
species Allobaculum stercoricanis 302 258 1
species Allocatelliglobosispora scoriae 2
species Allochromatium palmeri 275
species Allochromatium tepidum 2
species Allochromatium vinosum 70 1 2
species Allocoleopsis franciscana 1 1
species Allocoprobacillus halotolerans 1
species Allofrancisella frigidaquae 2
species Allofrancisella guangzhouensis 8 1
species Allofustis seminis 28 2 2 1
species Allohahella antarctica 571 132 2 1
species Alloiococcus otitis 1 116
species Allokutzneria albata 39 1
species Allomeiothermus silvanus 3 8 8 2 2
species Alloprevotella rava 450 3 2 1
species Alloprevotella sp. oral taxon 473 1
species Alloprevotella tannerae 24 319 2 4 1 1
species Allopseudospirillum japonicum 1
species Allorhizobium ampelinum 3 1
species Allorhizobium pseudoryzae 18
species Allosaccharopolyspora coralli 24
species Alloscardovia criceti 55 1
species Alloscardovia macacae 96
species Alloscardovia omnicolens 180 74 19 3 2
species Allosphingosinicella indica 16 10
species Allosphingosinicella vermicomposti 3
species Alloyangia pacifica 20 2
species alpha proteobacterium HIMB5 3 1
species Alphainfluenzavirus influenzae 1
species Alphapapillomavirus 5 2
species Alphapapillomavirus 7 1
species Alphapapillomavirus 9 2
species Alphapolyomavirus quintihominis 3
species Alphaproteobacteria bacterium 2
species Alphaproteobacteria bacterium UBA7083 1
species Alsobacter metallidurans 2
species Alteracholeplasma palmae 64 36 2 1 2
species Alteracholeplasma parvum 35 70 1 1
species Altererythrobacter epoxidivorans 2 2 1
species Altererythrobacter ishigakiensis 7
species Altererythrobacter sp. B11 13 1 1
species Altererythrobacter sp. BO-6 9
species Altererythrobacter sp. TH136 19
species Altererythrobacter sp. ZODW24 5
species Alteribacillus bidgolensis 4
species Alteribacillus persepolensis 1
species Alteribacter aurantiacus 22
species Alterileibacterium massiliense 2 6
species Alteriqipengyuania halimionae 1
species Alternaria arborescens 2
species Alterococcus agarolyticus 34 1
species Alteromonas australica 4
species Alteromonas halophila 39
species Alteromonas litorea 1
species Alteromonas macleodii 38 4 2
species Alteromonas mediterranea 1 1 2
species Alteromonas naphthalenivorans 1
species Alteromonas pelagimontana 2
species Alteromonas simiduii 3
species Alteromonas sp. 76-1 1 1
species Alteromonas sp. B31-7 1
species Alteromonas sp. BL110 1
species Alteromonas sp. I4 1
species Alteromonas sp. RKMC-009 7 1
species Alteromonas sp. RW2A1 1
species Altibacter lentus 3
species Alysiella crassa 1
species Alysiella filiformis 1
species Amaricoccus kaplicensis 7 2 1
species Amaricoccus macauensis 136 1 2
species Amedibacillus dolichus 3081 626 2 10 3 3 3 2 1
species Amedibacterium intestinale 270 1 2 5 3
species Aminicella lysinilytica 1011
species Aminiphilus circumscriptus 522 6 5
species Aminipila butyrica 244 1 3
species Aminipila luticellarii 262 1 5 3
species Aminipila terrae 262 1 3
species Aminivibrio pyruvatiphilus 85
species Aminobacter aganoensis 7
species Aminobacter aminovorans 14 36 4 2 1
species Aminobacter anthyllidis 1
species Aminobacter ciceronei 1
species Aminobacter sp. MDW-2 1
species Aminobacter sp. MSH1 30 1
species Aminobacter sp. SR38 1
species Aminobacterium colombiense 8 3 7 2 2
species Aminobacterium mobile 2
species Aminomonas paucivorans 86 4
species Ammonifex degensii 92 2
species Ammonifex thiophilus 1733 6
species Ammoniphilus oxalaticus 2 33
species Ammoniphilus oxalivorans 265
species Amniculibacterium sp. G2-70 2
species Amorphoplanes auranticolor 1
species Amorphoplanes digitatis 11
species Amorphoplanes friuliensis 10 1 2
species Amphibacillus haojiensis 8
species Amphibacillus indicireducens 18
species Amphibacillus tropicus 2
species Amphibacillus xylanus 90 5 2
species Amphritea atlantica 147
species Amphritea balenae 1
species Amphritea japonica 1 1
species Amycolatopsis acidiphila 1
species Amycolatopsis aidingensis 1
species Amycolatopsis albispora 9 4 2
species Amycolatopsis azurea 4
species Amycolatopsis coloradensis 1
species Amycolatopsis flava 1
species Amycolatopsis helveola 1
species Amycolatopsis japonica 2
species Amycolatopsis keratiniphila 14 1
species Amycolatopsis mediterranei 1 13 1
species Amycolatopsis methanolica 15 15 2 1
species Amycolatopsis orientalis 4 1
species Amycolatopsis pretoriensis 1
species Amycolatopsis sacchari 1
species Amycolatopsis sp. AA4 8 4
species Amycolatopsis sp. BJA-103 6 1
species Amycolatopsis sp. CA-230715 1
species Amycolatopsis sp. FDAARGOS 1241 2
species Amycolatopsis sp. FU40 1
species Amycolatopsis sp. Hca4 15 1
species Amycolatopsis sp. Poz14 6
species Amycolatopsis sp. YIM 10 15 2
species Amycolatopsis umgeniensis 5
species Amycolatopsis xylanica 2
species Amylibacter marinus 5
species Amylolactobacillus amylophilus 2
species Anabaena cylindrica 2 1 3 1
species Anabaena sp. 90 1 2 1
species Anabaena sp. WA102 1 1 2
species Anabaenopsis circularis 1 1
species Anaerobacillus alkalidiazotrophicus 3
species Anaerobacillus alkalilacustris 1246
species Anaerobacillus arseniciselenatis 5
species Anaerobacillus isosaccharinicus 2
species Anaerobacterium chartisolvens 63 1 1
species Anaerobiospirillum succiniciproducens 13 14 69
species Anaerobiospirillum thomasii 34
species Anaerobium acetethylicum 528 1 2 9 1
species Anaerobranca californiensis 8 67
species Anaerobranca gottschalkii 56
species Anaerobranca zavarzinii 3677 2 3 7
species Anaerobutyricum hallii 1427 1 272 25 31 27 20 9 20 9 4 3 1
species Anaerobutyricum soehngenii 5 11 5 3 1
species Anaerocella delicata 206
species Anaerococcus degeneri 1
species Anaerococcus hydrogenalis 557 66 32 1 4
species Anaerococcus lactolyticus 322 163 73 1 1
species Anaerococcus mediterraneensis 230 1 2
species Anaerococcus murdochii 234 175
species Anaerococcus obesiensis 69 1 5 1 1
species Anaerococcus octavius 224 233 132 1
species Anaerococcus pacaensis 4
species Anaerococcus prevotii 283 155 23 262 1 1 4 1 3 3 2
species Anaerococcus provencensis 257 126
species Anaerococcus senegalensis 224 1 3
species Anaerococcus sp. 8404299 2 36 1
species Anaerococcus sp. 8405254 35
species Anaerococcus sp. 9401487 23
species Anaerococcus sp. gpac137 3
species Anaerococcus sp. HMSC068A02 1
species Anaerococcus sp. HMSC075B03 2
species Anaerococcus sp. PH9 22
species Anaerococcus sp. S8 87-3 186
species Anaerococcus sp. S8 F2 37
species Anaerococcus sp. S9 PR-16 10
species Anaerococcus sp. S9 PR-5 10
species Anaerococcus tetradius 458 6 20 1 1
species Anaerococcus vaginalis 963 471 277 21 1 2 2 5 1 2
species Anaerocolumna aminovalerica 1260 7 6
species Anaerocolumna cellulosilytica 1 267 2 1 1 3
species Anaerocolumna chitinilytica 268 2 3 1
species Anaerocolumna jejuensis 6
species Anaerocolumna sedimenticola 268 27 14 3
species Anaerocolumna sp. AGMB13025 1 3
species Anaerocolumna xylanovorans 3 2
species Anaerofilum agile 20 1
species Anaerofilum hominis 3
species Anaerofilum pentosovorans 29 1 7
species Anaerofilum sp. An201 5 1
species Anaerofilum sp. Marseille-P3374 1
species Anaerofustis stercorihominis 888 1064 190 1 7 7 1
species Anaeroglobus geminatus 827 13
species Anaerohalosphaera lusitana 47 1 2
species Anaerolinea thermolimosa 329 126
species Anaerolinea thermophila 2 34 1 2 2
species Anaerolineaceae bacterium oral taxon 439 163 1 3
species Anaerolineae bacterium 30 3
species Anaeromassilibacillus senegalensis 1 4 4 1
species Anaeromassilibacillus sp. 4
species Anaeromassilibacillus sp. 1001302B_160321_C8 4
species Anaeromassilibacillus sp. An172 1
species Anaeromassilibacillus sp. An200 1
species Anaeromassilibacillus sp. An250 4 4
species Anaeromassilibacillus sp. D41t1_190614_C2 4
species Anaeromassilibacillus sp. Marseille-P4683 3 3 1
species Anaeromicropila herbilytica 2 3
species Anaeromicropila populeti 170 1 1
species Anaeromusa acidaminophila 381 22
species Anaeromyxobacter dehalogenans 590 115 1 1
species Anaeromyxobacter oryzae 1 1
species Anaeromyxobacter paludicola 2
species Anaeromyxobacter sp. Fw109-5 131 1 2
species Anaeropeptidivorans aminofermentans 1 3
species Anaerophaga thermohalophila 16 1
species Anaeroplasma abactoclasticum 48 22
species Anaeroplasma bactoclasticum 21 4
species Anaeroplasma varium 1
species Anaerorhabdus furcosa 44 2
species Anaerosacchariphilus hominis 4
species Anaerosacchariphilus polymeriproducens 1 12
species Anaerosalibacter bizertensis 378
species Anaerosalibacter sp. Marseille-P3206 1
species Anaerosinus glycerini 80 1
species Anaerosphaera aminiphila 155
species Anaerospora hongkongensis 320 1
species Anaerosporobacter faecicola 1
species Anaerosporobacter mobilis 839 382 1 1
species Anaerostipes butyraticus 1210 39 1 9 2 1
species Anaerostipes caccae 1477 160 18 9 1 4 13 1 5 3 1
species Anaerostipes hadrus 1490 336 278 26 32 30 23 21 10 4 3 1
species Anaerostipes rhamnosivorans 44 268 12 25 3
species Anaerostipes sp. 8 4
species Anaerostipes sp. 3_2_56FAA 27 5
species Anaerostipes sp. 494a 55 21
species Anaerostipes sp. 5_1_63FAA 3 659
species Anaerostipes sp. 992a 3 1 3
species Anaerostipes sp. AIP 183.04 7
species Anaerostipes sp. IE4 1 5 9
species Anaerostipes sp. Marseille-Q3525 1
species Anaerotaenia torta 1
species Anaerotignum faecicola 3 4 1 4 1
species Anaerotignum lactatifermentans 1468 5 20 6 9 5 1
species Anaerotignum neopropionicum 1 1
species Anaerotignum propionicum 264 2 5 3
species Anaerotignum sp. MSJ-24 2 1
species Anaerotruncus colihominis 4491 1291 293 20 6 16 2 9 7 7 6 2 3 1 1
species Anaerotruncus massiliensis (ex Liu et al. 2021) 1
species Anaerotruncus massiliensis (ex Togo et al. 2019) 1
species Anaerotruncus rubiinfantis 1 10 2 9 2 4
species Anaerotruncus sp. 1
species Anaerotruncus sp. 1XD22-93 1
species Anaerotruncus sp. AF02-27 6 4 1
species Anaerotruncus sp. DFI.9.16 1
species Anaerotruncus sp. G3(2012) 4 1
species Anaerotruncus sp. NML 070203 3 135
species Anaerovibrio lipolyticus 4247 31 3 6 1
species Anaerovibrio slackiae 1
species Anaerovibrio sp. 656 7
species Anaerovirgula multivorans 2
species Anaerovorax odorimutans 119 1 1
species Anaplasma centrale 2
species Anatilimnocola aggregata 2
species Ancalomicrobium adetum 1
species Ancylobacter novellus 22 1
species Ancylobacter polymorphus 2 2
species Ancylobacter pratisalsi 17 1
species Ancylobacter rudongensis 1
species Ancylobacter sp. TS-1 34 2
species Anderseniella baltica 1
species Anderseniella sp. Alg231-50 15 4
species Andhravirus andhra 4
species Andhravirus St134 3
species Andreesenia angusta 22
species Andreprevotia lacus 1
species Aneurinibacillus aneurinilyticus 9
species Aneurinibacillus danicus 5
species Aneurinibacillus migulanus 8
species Aneurinibacillus soli 3 127 1 2 2
species Aneurinibacillus sp. Ricciae_BoGa-3 1 2
species Aneurinibacillus sp. XH2 102 1
species Aneurinibacillus terranovensis 1
species Aneurinibacillus thermoaerophilus 5
species Angelakisella massiliensis 3 6 3 2
species Angelakisella sp. 4
species Angustibacter aerolatus 5
species Annwoodia aquaesulis 1
species Anoxybacillus amylolyticus 3 13 2 1
species Anoxybacillus ayderensis 103 16 1 1
species Anoxybacillus caldiproteolyticus 2
species Anoxybacillus eryuanensis 13 26
species Anoxybacillus flavithermus 35 1 2
species Anoxybacillus gonensis 1 2
species Anoxybacillus kamchatkensis 1
species Anoxybacillus kaynarcensis 8
species Anoxybacillus kestanbolensis 22 13
species Anoxybacillus kualawohkensis 2
species Anoxybacillus rupiensis 39
species Anoxybacillus salavatliensis 12
species Anoxybacillus sediminis 2
species Anoxybacillus sp. HT14 3
species Anoxybacillus sp. PDR2 1
species Anoxybacillus tepidamans 5
species Anoxybacter fermentans 143 1 4 4 2
species Anoxynatronum sibiricum 929 1
species Anseongella ginsenosidimutans 109 2
species Antarcticibacterium arcticum 2 1
species Antarcticibacterium flavum 6 2
species Antarcticibacterium sp. 1MA-6-2 1
species Antarcticimonas flava 1
species Antarctobacter heliothermus 11 1 2
species Anthocerotibacter panamensis 1
species Anthracocystis panici-leucophaei 1
species Anthropogastromicrobium aceti 1
species Antribacter gilvus 1
species Apibacter raozihei 45 1 2
species Apilactobacillus apinorum 1
species Apilactobacillus apisilvae 1
species Apilactobacillus bombintestini 12 3 1
species Apilactobacillus kunkeei 4 1
species Apilactobacillus ozensis 15
species Apiotrichum mycotoxinovorans 4 1
species Apiotrichum porosum 1
species Aplosporella prunicola 2
species Aquabacterium citratiphilum 6
species Aquabacterium commune 7
species Aquabacterium fontiphilum 9 1
species Aquabacterium olei 4 79 1 1
species Aquabacterium parvum 57 2
species Aquabacterium sp. Aqua2 1
species Aquabacterium sp. Aqua3 1
species Aquamicrobium ahrensii 1
species Aquamicrobium defluvii 8
species Aquamicrobium segne 12
species Aquaspirillum arcticum 27
species Aquaspirillum polymorphum 7
species Aquaspirillum putridiconchylium 23
species Aquaspirillum serpens 7
species Aquaspirillum sp. LM1 83 1
species Aquella oligotrophica 2 1 2
species Aquibacter zeaxanthinifaciens 9
species Aquibium microcysteis 1
species Aquibium oceanicum 43
species Aquicella lusitana 12 2
species Aquicella siphonis 10 2
species Aquifex aeolicus 2
species Aquiflexum balticum 15 18 1 1
species Aquihabitans daechungensis 27
species Aquihabitans sp. G128 2
species Aquimarina agarilytica 1
species Aquimarina agarivorans 9
species Aquimarina brevivitae 1
species Aquimarina gracilis 21
species Aquimarina intermedia 1
species Aquimarina macrocephali 10
species Aquimarina penaei 5
species Aquimarina salinaria 1
species Aquimarina sp. AD1 1 4 1
species Aquimarina sp. AD10 15 4 1
species Aquimarina sp. BL5 1 4 2
species Aquimarina sp. TRL1 10 2
species Aquimonas voraii 38 27
species Aquincola tertiaricarbonis 9 2
species Aquipluma nitroreducens 214 1
species Aquipuribacter hungaricus 1
species Aquipuribacter nitratireducens 5
species Aquirhabdus parva 1 1 2
species Aquirufa nivalisilvae 6 2
species Aquisalibacillus elongatus 3
species Aquisphaera giovannonii 2 92 2 1
species Aquitalea aquatilis 71 1
species Aquitalea denitrificans 65 89
species Aquitalea magnusonii 9 14 1 1 2
species Aquitalea sp. USM4 22 3
species Arabiibacter massiliensis 267 1 1 1
species Arachidicoccus ginsenosidivorans 46 1 2
species Arachidicoccus soli 24 3 2
species Arachidicoccus sp. BS20 38 4 2
species Arachidicoccus terrestris 1 2
species Arachnia propionica 1 1 206 1 2 2
species Arachnia rubra 1
species Arcanobacterium buesumense 8 2
species Arcanobacterium canis 44 2
species Arcanobacterium haemolyticum 1 94 1
species Arcanobacterium hippocoleae 6 2 1
species Arcanobacterium phocae 35 2 17
species Arcanobacterium phocisimile 2
species Arcanobacterium pinnipediorum 2
species Arcanobacterium pluranimalium 4
species Arcanobacterium sp. NML 06501 26
species Arcanobacterium wilhelmae 2
species Archaeoglobus fulgidus 4 1 1
species Archaeoglobus infectus 3
species Archaeoglobus profundus 1
species Archaeoglobus sulfaticallidus 2
species Archaeoglobus veneficus 1
species archaeon 1
species Archangium disciforme 10
species Archangium gephyra 93 2
species Archangium primigenium 1
species Archangium violaceum 1 2
species Arcicella aquatica 92
species Arcicella aurantiaca 3
species Arcicella rigui 8
species Arcicella rosea 30
species Arcobacter acticola 1
species Arcobacter aquimarinus 2
species Arcobacter cloacae 1
species Arcobacter defluvii 12
species Arcobacter ellisii 2 2
species Arcobacter nitrofigilis 6 1 2 2
species Arcobacter peruensis 1
species Arcobacter sp. L 1 1
species Arcobacter suis 1 4
species Arcobacter venerupis 1 1 1
species Arcticibacterium luteifluviistationis 2 1 2
species Ardenticatena maritima 27 2
species Arenibacter algicola 9 3 2
species Arenibacter latericius 3 1
species Arenibacterium halophilum 1
species Arenimonas daechungensis 8
species Arenimonas daejeonensis 8
species Arenimonas malthae 8
species Arenimonas maotaiensis 11
species Arenimonas subflava 5
species Aridibacter kavangonensis 18
species Aristophania vespae 1
species Armatimonadetes bacterium Uphvl-Ar2 59
species Armatimonas rosea 3
species Armillaria ostoyae 6
species Aromatoleum aromaticum 42 2 1
species Aromatoleum bremense 1
species Aromatoleum petrolei 1
species Aromatoleum toluclasticum 1
species Arsenicicoccus bolidensis 1
species Arsenicicoccus piscis 2
species Arsenicicoccus sp. oral taxon 190 33 1
species Arsenophonus endosymbiont of Aleurodicus dispersus 2 1
species Arsenophonus endosymbiont of Aphis craccivora 2
species Arsenophonus endosymbiont of Bemisia tabaci 9
species Arsenophonus endosymbiont of Tetraleurodes mori 4
species Arsenophonus endosymbiont of Trialeurodes vaporariorum 7
species Arsenophonus nasoniae 33 2 1 2
species Arthrobacter agilis 43 1
species Arthrobacter alpinus 158 4 1
species Arthrobacter antioxidans 1
species Arthrobacter citreus 90 1 1
species Arthrobacter crystallopoietes 1 67 2 2
species Arthrobacter dokdonellae 76 1
species Arthrobacter gengyunqii 1 1
species Arthrobacter liuii 4
species Arthrobacter pascens 1
species Arthrobacter psychrochitiniphilus 74
species Arthrobacter psychrolactophilus 19
species Arthrobacter saudimassiliensis 74
species Arthrobacter sp. 2 2
species Arthrobacter sp. 24S4-2 37
species Arthrobacter sp. 7749 56
species Arthrobacter sp. ATCC 21022 1
species Arthrobacter sp. CDRTa11 1
species Arthrobacter sp. ERGS1:01 51 1 1
species Arthrobacter sp. FB24 36 1 1
species Arthrobacter sp. FW305-BF8 1
species Arthrobacter sp. Helios 1
species Arthrobacter sp. Hiyo4 6
species Arthrobacter sp. Hiyo8 31
species Arthrobacter sp. KBS0702 13
species Arthrobacter sp. LS16 2
species Arthrobacter sp. MN05-02 12
species Arthrobacter sp. NEB 688 9
species Arthrobacter sp. NicSoilC5 1
species Arthrobacter sp. P-124 1
species Arthrobacter sp. PAMC 25486 48 3
species Arthrobacter sp. PAMC25564 45 1
species Arthrobacter sp. PGP41 15 1
species Arthrobacter sp. PM3 31
species Arthrobacter sp. QXT-31 27 1
species Arthrobacter sp. RE 50 1
species Arthrobacter sp. Rue61a 1 1
species Arthrobacter sp. 'SMCC ZAT031' 1
species Arthrobacter sp. U41 43 1 1
species Arthrobacter sp. UKPF54-2 16 1
species Arthrobacter sp. YC-RL1 6 1
species Arthrobacter sp. YN 37
species Arthrobacter sp. ZXY-2 1
species Arthrobacter sulfonylureivorans 1
species Arthrobacter zhangbolii 1
species Arthronema africanum 22 1
species Arthrospira platensis 3 3 1 1 2
species Arthrospira sp. NMG 1
species Arthrospira sp. TJSD092 6
species AS 4.1585 3
species Asaccharospora irregularis 3 97 1
species Asaia bogorensis 6 1 1
species Asanoa hainanensis 1
species Ascidianibacter aurantiacus 1
species Aspergillus alliaceus 2
species Aspergillus caelatus 1
species Aspergillus candidus 1 1
species Aspergillus clavatus 2 1
species Aspergillus fijiensis 1
species Aspergillus fischeri 3
species Aspergillus flavus 5 8 1
species Aspergillus fumigatus 9 8 1
species Aspergillus glaucus 6
species Aspergillus heteromorphus 2
species Aspergillus homomorphus 1 1
species Aspergillus ibericus 1 1
species Aspergillus lentulus 4
species Aspergillus luchuensis 1
species Aspergillus mulundensis 2 1
species Aspergillus nidulans 1
species Aspergillus niger 4 1
species Aspergillus novofumigatus 3
species Aspergillus ochraceoroseus 1 1
species Aspergillus puulaauensis 1
species Aspergillus ruber 1
species Aspergillus saccharolyticus 1
species Aspergillus sclerotioniger 2
species Aspergillus sojae 3 1
species Aspergillus steynii 2
species Aspergillus tanneri 5 1
species Aspergillus terreus 3 1
species Aspergillus thermomutatus 5
species Aspergillus uvarum 1
species Aspergillus welwitschiae 2 1
species Aspergillus wentii 1
species Aster yellows witches'-broom phytoplasma 1
species Asteroleplasma anaerobium 428 3 1 2 1
species Asticcacaulis benevestitus 1
species Asticcacaulis endophyticus 7
species Asticcacaulis excentricus 2 6 131 1 1
species Asticcacaulis sp. AND118 1
species Asticcacaulis taihuensis 1
species ATCC 15434 1
species ATCC 33924 1
species ATCC 700853 2
species Athalassotoga saccharophila 2
species Atlantibacter hermannii 61 2
species Atlantibacter subterranea 1
species Atopobacter phocae 6
species Atopobiaceae bacterium 1
species Atopobium deltae 45 25
species Atopobium fossor 920 2 1
species Atopobium minutum 134 4 1
species Atopobium sp. BS2 5 1
species Atopobium sp. BV3Ac4 1
species Atopobium sp. DMCT15023 3
species Atopobium sp. F0209 33
species Atopobium sp. ICM42b 2
species Atopobium sp. ICM57 4
species Atopobium sp. MVA9 16
species Atopobium sp. oral taxon 416 1 2
species Atopobium sp. S3MV24 13
species Atopobium sp. S3MV26 2
species Atopobium sp. S3PFAA1-4 2
species Atopobium sp. S4-A11a 2
species Atopococcus tabaci 29 1
species Atopomonas hussainii 6
species Atopostipes suicloacalis 112 2
species Atribacter laminatus 2
species Aurantiacibacter atlanticus 3 1
species Aurantiacibacter gangjinensis 15 19
species Aurantiacibacter luteus 2
species Aurantimicrobium minutum 7
species Aurantimicrobium photophilum 18 1 2
species Aurantimicrobium sp. MWH-Uga1 4
species Aurantimonas coralicida 2
species Aurantimonas litoralis 61
species Aurantimonas manganoxydans 4
species Aurantimonas sp. DM33-3 1
species Aurantimonas sp. HBX-1 2
species Auraticoccus monumenti 3 18 1
species Aureibacter tunicatorum 15
species Aureibaculum algae 35 2
species Aureicoccus marinus 1
species Aureimonas altamirensis 3 1
species Aureimonas frigidaquae 6
species Aureimonas mangrovi 25 1
species Aureimonas rubiginis 8
species Aureimonas sp. AU20 27 1 1
species Aureimonas sp. SA4125 1
species Aureliella helgolandensis 1
species Aureobasidium melanogenum 2
species Aureobasidium namibiae 2
species Aureobasidium pullulans 4
species Aureobasidium subglaciale 2
species Aureococcus anophagefferens 1
species Auricoccus indicus 1
species Auritidibacter sp. NML130574 33
species Austwickia chelonae 22 2
species Auxenochlorella protothecoides 1
species Avibacterium avium 563 1 1 4
species Avibacterium paragallinarum 9 71 6 2
species Avibacterium volantium 4 19
species Azoarcus indigens 1
species Azoarcus olearius 1 22 1 1
species Azoarcus sp. CIB 30
species Azoarcus sp. DD4 61 2
species Azoarcus sp. DN11 33 1
species Azoarcus sp. KH32C 104 1 1
species Azohydromonas australica 21
species Azohydromonas lata 3
species Azomonas insignis 4
species Azomonas macrocytogenes 1
species Azonexus caeni 5
species Azonexus hydrophilus 12 1
species Azorhizobium caulinodans 3 63 2
species Azorhizophilus paspali 6
species Azospira inquinata 1 1
species Azospira oryzae 6 5 1
species Azospira restricta 4 2
species Azospira sp. I09 14
species Azospirillum brasilense 1 2 190 1
species Azospirillum canadense 1
species Azospirillum doebereinerae 3 1
species Azospirillum halopraeferens 1
species Azospirillum humicireducens 9 1
species Azospirillum lipoferum 97 4 1
species Azospirillum oryzae 16 9
species Azospirillum palatum 256 1
species Azospirillum picis 2
species Azospirillum ramasamyi 19 2
species Azospirillum sp. 2
species Azospirillum sp. 47_25 1
species Azospirillum sp. 51_20 1
species Azospirillum sp. B510 6 3
species Azospirillum sp. CAG:239 1
species Azospirillum sp. CAG:260 1
species Azospirillum sp. TSA2s 19 1
species Azospirillum sp. TSH100 16 1
species Azospirillum sp. TSH58 4
species Azospirillum thermophilum 100 1 1
species Azospirillum thiophilum 18 2
species Azospirillum zeae 1
species Azotobacter chroococcum 12 1 1
species Azotobacter salinestris 24 1
species Azotobacter vinelandii 11 1 1
species Babesia bovis 1
species Babesia sp. Xinjiang 1
species Bacillaceae bacterium 5
species Bacilli bacterium 1 3
species Bacillota bacterium 4
species Bacillus aeolius 2
species Bacillus aerius 5
species Bacillus aerophilus 9
species Bacillus albus 1 1
species Bacillus alcaliinulinus 8
species Bacillus alkalicellulosilyticus 1
species Bacillus altitudinis 1 49 2 2
species Bacillus alveayuensis 1
species Bacillus amyloliquefaciens 37 1 71 1 2 1
species Bacillus anthracis 18 56 1 3 2
species Bacillus aquiflavi 2
species Bacillus arachidis 1
species Bacillus arbutinivorans 8
species Bacillus atrophaeus 1 5 8 6 1 1
species Bacillus badius 5 2 2
species Bacillus bombysepticus 1
species Bacillus canaveralius 16
species Bacillus carboniphilus 15
species Bacillus cereus 13 1 1 232 1 5 13 2 1
species Bacillus ciccensis 26 1
species Bacillus coahuilensis 1
species Bacillus cytotoxicus 46 2
species Bacillus djibelorensis 3
species Bacillus ferrariarum 570 1
species Bacillus fonticola 4 2
species Bacillus freudenreichii 44 1
species Bacillus glycinifermentans 79 8 2
species Bacillus gobiensis 35 7
species Bacillus hackensackii 1
species Bacillus halotolerans 329 1
species Bacillus haynesii 7
species Bacillus horti 35
species Bacillus infantis 6 139 1 5 2
species Bacillus infernus 107
species Bacillus isabeliae 1
species Bacillus licheniformis 17 5 1 1
species Bacillus mediterraneensis 1
species Bacillus methanolicus 3 31 3 2
species Bacillus mojavensis 6 18 1 1
species Bacillus mycoides 96 7 2
species Bacillus nematocida 5 12
species Bacillus nitratireducens 2
species Bacillus olivae 10
species Bacillus pakistanensis 1
species Bacillus paralicheniformis 47 2 2
species Bacillus paranthracis 1 1
species Bacillus phage SBSphiC 5
species Bacillus phage SP-10 2
species Bacillus pseudomegaterium 19
species Bacillus pseudomycoides 5 51 10 1 2
species Bacillus pumilus 4 183 2 2 2
species Bacillus safensis 63 2
species Bacillus shandongensis 301
species Bacillus shivajii 2
species Bacillus siamensis 6 2
species Bacillus smithii 1 8 1 2
species Bacillus solimangrovi 9
species Bacillus sonorensis 25 19 1
species Bacillus sp. 1NLA3E 20 1 2
species Bacillus sp. 2+3 3
species Bacillus sp. A116_S68 1
species Bacillus sp. ABP14 1
species Bacillus sp. CMF12 1
species Bacillus sp. Cs-700 3 2
species Bacillus sp. CZb 1
species Bacillus sp. D-1 1
species Bacillus sp. DHT-33 4
species Bacillus sp. DU-106 1
species Bacillus sp. DX3.1 1
species Bacillus sp. FJAT-18017 148 4
species Bacillus sp. FJAT-22090 49 1
species Bacillus sp. FJAT-42376 160 3
species Bacillus sp. FJAT-45348 29 3
species Bacillus sp. Gsoil 3045 7
species Bacillus sp. HBCD-sjtu 1 1
species Bacillus sp. HC15 11
species Bacillus sp. IHB B 7164 1
species Bacillus sp. JAS24-2 1
species Bacillus sp. JEM-1 1
species Bacillus sp. KH172YL63 111 2
species Bacillus sp. Lzh-5 1
species Bacillus sp. N1-1 4 1 2
species Bacillus sp. N-16 2
species Bacillus sp. N5-665 1
species Bacillus sp. NSP2.1 13
species Bacillus sp. NSP9.1 86
species Bacillus sp. 'oryzae' 2
species Bacillus sp. OxB-1 18 2
species Bacillus sp. PAMC26543 1
species Bacillus sp. Pc3 1
species Bacillus sp. PGP15 1
species Bacillus sp. PrMC7 1
species Bacillus sp. S3 71 2
species Bacillus sp. SB49 164 2 1
species Bacillus sp. SRB3LM 1
species Bacillus sp. SYJ 1
species Bacillus sp. T41 4
species Bacillus sp. THAF10 16 1 2
species Bacillus sp. V3-13 1
species Bacillus sp. wens01 1
species Bacillus sp. WP8 4 1
species Bacillus sp. X1(2014) 81 1
species Bacillus sp. Y1 102 4 2
species Bacillus sp. ZJS3 1
species Bacillus stratosphericus 2
species Bacillus subtilis 100 31 256 1 3 2
species Bacillus tequilensis 1
species Bacillus thermotolerans 23
species Bacillus thuringiensis 210 1 13 2 1
species Bacillus tianmuensis 6
species Bacillus toyonensis 2
species Bacillus tropicus 2
species Bacillus vallismortis 12
species Bacillus velezensis 189 57 121 1 2 2
species Bacillus weihaiensis 59 3 2
species Bacillus wiedmannii 5 1
species Bacillus xiamenensis 2
species Bacteriophage sp. 1 12
species Bacterioplanes sanyensis 1 9 1 1
species Bacteriovorax stolpii 82 20 2
species bacterium 32 4
species bacterium 210702-DFI.5.13 4
species bacterium 210820-DFI.5.26 4
species bacterium 210820-DFI.6.38 4
species bacterium 210820-DFI.6.52 4
species bacterium 210917-DFI.7.65 3
species bacterium 210917-SL.2.15 1
species bacterium 210928-DFI.3.100 4
species bacterium AD3011 3
species bacterium BFN5 226 1
species bacterium BM0619 1
species bacterium endosymbiont of Onthophagus Taurus 1
species bacterium enrichment culture clone NBAR007 1
species bacterium enrichment culture clone NBAR019 1
species bacterium enrichment culture clone P11-6B 1
species bacterium enrichment culture clone P24-9H 2
species bacterium enrichment culture clone P39-11D 1
species bacterium enrichment culture clone P47-5C 2
species bacterium enrichment culture clone P56-2C 1
species bacterium enrichment culture clone P75-7G 2
species bacterium ic1277 1
species bacterium LF-3 1 6 27 4
species bacterium mpn-isolate group 18 1
species bacterium mpn-isolate group 25 1
species bacterium MSK17_88 4
species bacterium MSK20_81 4
species bacterium NLAE-zl-H10 1
species bacterium NLAE-zl-H54 2
species bacterium NLAE-zl-P211 1
species bacterium NLAE-zl-P430 2
species bacterium NLAE-zl-P827 2
species bacterium P2C1 1
species bacterium TM223 4
species bacterium TM462 4
species bacterium TM473 4
species bacterium YE57 1
species Bacteroidaceae bacterium 1 4
species Bacteroidales bacterium 4
species Bacteroidales bacterium CF 189 1
species Bacteroides acidifaciens 3835 1223 401 1 9 16 16 7 8 6 4 2 1
species Bacteroides caccae 3810 1456 652 279 43 26 24 30 8 16 10 3 3 2 1
species Bacteroides caecigallinarum 3 1
species Bacteroides caecimuri 2
species Bacteroides caecimuris 274 11 2 31 8 2 3 1
species Bacteroides cellulosilyticus 4398 1268 277 18 9 12 31 7 10 7 2 3 1
species Bacteroides chinchillae 5
species Bacteroides clarus 2090 838 133 55 9 2 14 7 1 7 6 3 1
species Bacteroides congonensis 2
species Bacteroides coprosuis 3 136 4 2
species Bacteroides cutis 2
species Bacteroides denticanum 4335 3 3 7
species Bacteroides eggerthii 2234 721 171 87 12 2 19 24 1 10 1 4 2 3 1 1
species Bacteroides faecalis 2 1 1
species Bacteroides faecichinchillae 1 1 6
species Bacteroides faecis 4196 2 443 39 9 17 2 9 6 1 3
species Bacteroides faecium 272 1 2 3
species Bacteroides finegoldii 4082 1210 606 68 12 14 23 1 9 4 6 1 2 1
species Bacteroides fluxus 3887 817 7 9 8 7 8
species Bacteroides fragilis 3467 1412 393 277 50 4 30 30 9 4 2 3 1 1
species Bacteroides galacturonicus 2 4 3 4
species Bacteroides gallinaceum 1
species Bacteroides gallinarum 2382 1349 12 15 2 1 9 1 6 1
species Bacteroides graminisolvens 4142 1057 3 7
species Bacteroides helcogenes 132 490 1 272 1 2 1 6 2 3
species Bacteroides heparinolyticus 1729 522 272 3 5 1 3
species Bacteroides humanifaecis 2 4 3
species Bacteroides intestinalis 2927 1224 296 274 13 1 11 28 7 11 6 2 3 3 1 1
species Bacteroides koreensis 2 4
species Bacteroides kribbi 1 4
species Bacteroides luhongzhouii 2 3
species Bacteroides luti 632 2 1 4
species Bacteroides mediterraneensis 1 1
species Bacteroides muris (ex Fokt et al. 2023) 1
species Bacteroides ndongoniae 18
species Bacteroides nordii 2849 1252 228 63 6 10 5 5 7 3 3 4 1 3 2 1
species Bacteroides oleiciplenus 537 48 8 6 1 8 2 1 5 1
species Bacteroides ovatus 4531 1304 411 279 49 2 28 32 3 10 7 4 4 3 2 1
species Bacteroides parvus 4
species Bacteroides phage ARB14 2
species Bacteroides phage ARB25 2
species Bacteroides phage B124-14 8
species Bacteroides phage B40-8 6
species Bacteroides phage DAC16 12
species Bacteroides phage DAC22 6
species Bacteroides phage DAC23 6
species Bacteroides phage HNL05 2
species Bacteroides phage HNL35 2
species Bacteroides phage p00 125
species Bacteroides phage SJC03 11
species Bacteroides phage SJC10 3 1
species Bacteroides phage SJC12 3
species Bacteroides phage SJC15 2
species Bacteroides phage SJC18 2
species Bacteroides phage SJC20 2
species Bacteroides phage SJC22 2
species Bacteroides phage SJC23 2
species Bacteroides phage SJC25 2
species Bacteroides propionicifaciens 10 595
species Bacteroides pyogenes 10 1138 1 4 1
species Bacteroides reticulotermitis 1196 1 3 1
species Bacteroides rodentium 4579 1363 20 71 7 15 21 9 7 1
species Bacteroides salyersiae 2185 770 260 64 22 17 12 22 1 3 9 1 3 3 1
species Bacteroides sp 8
species Bacteroides sp. 2 16 20 5 27 2 4
species Bacteroides sp. 1_1_14 5 3
species Bacteroides sp. 1_1_30 4 1
species Bacteroides sp. 1001136B_160425_E2 1
species Bacteroides sp. 1001302B_160321_D4 4
species Bacteroides sp. 111 1 2
species Bacteroides sp. 14(A) 40 2
species Bacteroides sp. 1AL 1 4
species Bacteroides sp. 1B2 1 3
species Bacteroides sp. 1BL 2
species Bacteroides sp. 2_1_22 4
species Bacteroides sp. 2_1_33B 4
species Bacteroides sp. 2_2_4 1 140 4
species Bacteroides sp. 2011_Ileo_VSA_D11 2
species Bacteroides sp. 2011_Ileo_VSA_D7 8
species Bacteroides sp. 2011_Ileo_VSA_D8 1
species Bacteroides sp. 224 1
species Bacteroides sp. 265d 1
species Bacteroides sp. 3_1_13 4
species Bacteroides sp. 3_1_19 4
species Bacteroides sp. 3_1_23 6 4
species Bacteroides sp. 3_1_33FAA 3
species Bacteroides sp. 3_1_40A 214 4 3
species Bacteroides sp. 3_2_5 2
species Bacteroides sp. 314-4 2
species Bacteroides sp. 31SF15 31
species Bacteroides sp. 35AE31 1 1
species Bacteroides sp. 35AE37 334 4
species Bacteroides sp. 35BE34 1
species Bacteroides sp. 35BE35 1
species Bacteroides sp. 4_1_36 9 1 4
species Bacteroides sp. 4_3_47FAA 1 12 3
species Bacteroides sp. 4072 158
species Bacteroides sp. 41_26 1
species Bacteroides sp. 43_46 3
species Bacteroides sp. 44_46 3
species Bacteroides sp. 51 1
species Bacteroides sp. 6-8 2
species Bacteroides sp. 7853 1 11
species Bacteroides sp. 9_1_42FAA 2 3 1
species Bacteroides sp. A1C1 271 8 1 29 4 3
species Bacteroides sp. AF04-22 4
species Bacteroides sp. AF14-46 4
species Bacteroides sp. AF15-14LB 4
species Bacteroides sp. AF15-23LB 3
species Bacteroides sp. AF16-29 3
species Bacteroides sp. AF16-7 4
species Bacteroides sp. AF17-1 3
species Bacteroides sp. AF18-33 4 1
species Bacteroides sp. AF20-13LB 4 1
species Bacteroides sp. AF25-17LB 4
species Bacteroides sp. AF25-18 3 1
species Bacteroides sp. AF25-38AC 4
species Bacteroides sp. AF25-5LB 4
species Bacteroides sp. AF26-10BH 4
species Bacteroides sp. AF27-10BH 4
species Bacteroides sp. AF29-11 4
species Bacteroides sp. AF32-15BH 1 3
species Bacteroides sp. AF32-8BH 4
species Bacteroides sp. AF33-23 4
species Bacteroides sp. AF34-31BH 4
species Bacteroides sp. AF35-22 4
species Bacteroides sp. AF36-11BH 4
species Bacteroides sp. AF37-16AC 4
species Bacteroides sp. AF39-10AT 2 3
species Bacteroides sp. AF39-16AC 4
species Bacteroides sp. AM07-18 4
species Bacteroides sp. AM16-13 4
species Bacteroides sp. AM16-15 2
species Bacteroides sp. AM18-9 3
species Bacteroides sp. AM22-3LB 2 2
species Bacteroides sp. AM23-12 3
species Bacteroides sp. AM23-18 3
species Bacteroides sp. AM25-34 2
species Bacteroides sp. AM26-11 3
species Bacteroides sp. AM26-2 4
species Bacteroides sp. AM27-13 3
species Bacteroides sp. AM28-6 3
species Bacteroides sp. AM30-16 4
species Bacteroides sp. AM32-11AC 4
species Bacteroides sp. AM37-9 4
species Bacteroides sp. AM41-16 4
species Bacteroides sp. AM44-19 4
species Bacteroides sp. AM51-7 4
species Bacteroides sp. AM54-2NS 4
species Bacteroides sp. AM56-10ce 4
species Bacteroides sp. AN 5745 11
species Bacteroides sp. AR20 3 412 1 2 3
species Bacteroides sp. AR29 3 106 4
species Bacteroides sp. B1-V-101 3
species Bacteroides sp. baku-33 1
species Bacteroides sp. BFG-257 2
species Bacteroides sp. BLBE-2 1
species Bacteroides sp. C13EG172 1
species Bacteroides sp. CACC 737 270 2 4 3
species Bacteroides sp. CAG:144 2
species Bacteroides sp. CAG:189 3
species Bacteroides sp. CAG:20 4
species Bacteroides sp. CAG:754 2
species Bacteroides sp. CAG:927 1
species Bacteroides sp. CAG:98 2
species Bacteroides sp. canine oral taxon 040 1 9
species Bacteroides sp. CB57 4
species Bacteroides sp. CF01-10NS 4
species Bacteroides sp. D1 4 1
species Bacteroides sp. D2 4 1 3
species Bacteroides sp. D-2 3
species Bacteroides sp. D20 160 7 1 4
species Bacteroides sp. D22 3 105 4 4
species Bacteroides sp. D8 1 1
species Bacteroides sp. DH3716P 1
species Bacteroides sp. DJF_B097 56 1 2
species Bacteroides sp. dnLKV2 1 3 1 2
species Bacteroides sp. dnLKV3 2
species Bacteroides sp. dnLKV7 1 1
species Bacteroides sp. dnLKV9 105
species Bacteroides sp. EBA5-17 524
species Bacteroides sp. enrichment culture clone CS3 1
species Bacteroides sp. ES-27 1
species Bacteroides sp. F-4 1
species Bacteroides sp. feline oral taxon 113 9
species Bacteroides sp. feline oral taxon 308 8
species Bacteroides sp. GM023 1
species Bacteroides sp. GrassCarp9 1
species Bacteroides sp. HAWD3 7
species Bacteroides sp. HF-162 2 4 3
species Bacteroides sp. HF-5613 4
species Bacteroides sp. HGA0134 1
species Bacteroides sp. HMSC067B03 1
species Bacteroides sp. HMSC068A09 1
species Bacteroides sp. HMSC073E02 4
species Bacteroides sp. HPS0048 31 4 1
species Bacteroides sp. J1511 317
species Bacteroides sp. K03 1
species Bacteroides sp. M10 1
species Bacteroides sp. Marseille-P8574 4
species Bacteroides sp. MSK.17.76 4 1
species Bacteroides sp. MSK.18.22 4
species Bacteroides sp. MSK.18.37 4
species Bacteroides sp. MSK.18.39 4
species Bacteroides sp. MSK.18.83 4
species Bacteroides sp. MSK.18.91 4
species Bacteroides sp. MSK.20.12 4
species Bacteroides sp. MSK.20.82 3
species Bacteroides sp. N54.MGS-20 4
species Bacteroides sp. NB-8 7
species Bacteroides sp. NMBE5 3 3 3
species Bacteroides sp. NSJ-39 2
species Bacteroides sp. NSJ-48 1 3 1
species Bacteroides sp. OF03-11BH 4 1
species Bacteroides sp. PHL 2737 1 1
species Bacteroides sp. R6 1 1
species Bacteroides sp. S-17 12
species Bacteroides sp. S-18 1 1
species Bacteroides sp. S236 5
species Bacteroides sp. S254 7
species Bacteroides sp. S427 1 2
species Bacteroides sp. SL.2.06 4
species Bacteroides sp. SLC1-38 47 1 12
species Bacteroides sp. Smarlab 3301643 20 27
species Bacteroides sp. Smarlab 3302398 1
species Bacteroides sp. Smarlab 3302996 14
species Bacteroides sp. 'Smarlab BioMol-2301151' 39
species Bacteroides sp. Tilapia9 16
species Bacteroides sp. TP-5 19 13
species Bacteroides sp. UNK.MGS-14 2
species Bacteroides sp. UW 2
species Bacteroides sp. W20 2
species Bacteroides sp. WA1 3
species Bacteroides sp. WH302 33
species Bacteroides sp. WH305 1
species Bacteroides sp. XB12B 3 221
species Bacteroides sp. XB44A 1 40 1
species Bacteroides sp. ZJ-18 2
species Bacteroides stercorirosoris 4620 3 143 4 4 1 6 6 7 1
species Bacteroides stercoris 4217 1385 320 172 31 14 13 22 9 5 10 3 3 3 1
species Bacteroides thetaiotaomicron 4524 925 633 281 31 11 28 32 9 22 1 9 7 6 3 3 1 1
species Bacteroides timonensis 6 1 12 1
species Bacteroides uniformis 4587 1486 635 283 41 24 30 28 9 23 1 10 7 6 4 4 3 2 1 1
species Bacteroides xylanisolvens 4632 1330 166 276 20 24 28 9 4 11 7 4 3 1
species Bacteroides zhangwenhongii 2 3
species Bacteroides zoogleoformans 593 240 272 1 5 3 3 1
species Bacteroidetes bacterium N83 3
species Bacteroidetes bacterium UKL13-3 39
species Bacteroidia bacterium UC5.1-2G11 3
species Bacteroidota bacterium 7 2 4
species Baekduia soli 64 2
species Baia soyae 94
species Balneatrix alpica 39
species Balneola alkaliphila 3
species Balneola vulgaris 253 1
species Balneolaceae bacterium 3
species Bariatricus massiliensis 1 1 1 1 1
species Barnesiella intestinihominis 1002 373 96 16 1 12 7 8 17 3 4 1 1
species Barnesiella sp. 1 4
species Barnesiella sp. B2-R-119 4
species Barnesiella sp. EBA4-14 33 1
species Barnesiella sp. S496 1 2
species Barnesiella viscericola 453 2 272 11 2 4 31 8 2 3 2
species Barnesiellaceae bacterium 2
species Barrientosiimonas endolithica 30
species Bartonella apis 97 4
species Bartonella bacilliformis 5
species Bartonella birtlesii 1
species Bartonella clarridgeiae 1
species Bartonella coopersplainsensis 13
species Bartonella grahamii 2
species Bartonella krasnovii 1
species Bartonella quintana 3
species Bartonella rattimassiliensis 2 1
species Bartonella rochalimae 141 3
species Bartonella sp. WD16.2 1 2
species Bartonella tribocorum 1
species Basilea psittacipulmonis 5 1 2
species Bathycoccus prasinos 1
species Bathymodiolus septemdierum thioautotrophic gill symbiont 1
species Bathymodiolus thermophilus thioautotrophic gill symbiont 1
species Bdellovibrio bacteriovorus 11 6 111 1 2
species Bdellovibrio reynosensis 1
species Bdellovibrio sp. NC01 2
species Bdellovibrio sp. SKB1291214 1
species Beauveria bassiana 1
species Beduini massiliensis 1 1 1 1
species Beggiatoa alba 1
species Beggiatoa leptomitoformis 2
species Beijerinckia derxii 1
species Beijerinckia indica 3 1 1
species Beijerinckia mobilis 1
species Beijerinckiaceae bacterium 4 1
species Beijerinckiaceae bacterium RH AL1 51
species Belliella baltica 14 8 3 2
species Belliella pelovolcani 7
species Bellilinea caldifistulae 15 1
species Belnapia moabensis 2
species Belnapia mucosa 1
species Belnapia soli 1 1
species Bergeyella cardium 2
species Bergeyella sp. AF14 3
species Bergeyella zoohelcum 79
species Berkeleya fennica 1
species Bermanella marisrubri 12 1 1
species Bernardetia litoralis 113 19 1 2
species Berryella intestinalis 245 1 1 1 2
species Berryella wangjianweii 253 1
species Besnoitia besnoiti 1 1
species beta proteobacterium CB 1 1
species Beta vulgaris 1
species Betapapillomavirus 2 3
species Betapapillomavirus 3 3
species Betapapillomavirus 4 1
species Betapolyomavirus secuhominis 1
species Betaproteobacteria bacterium 4
species Betaproteobacteria bacterium GR16-43 40
species Betaproteobacteria bacterium UKL13-2 3
species Beutenbergia cavernae 17 1 2
species Bianquea renquensis 2
species Biavirus raunefjordenense 1
species Bibersteinia trehalosi 2 10 1
species Bifidobacteriaceae bacterium MCC01941 3
species Bifidobacteriaceae bacterium MCC01943 3
species Bifidobacteriaceae bacterium MCC01947 3
species Bifidobacteriaceae bacterium MCC01972 3
species Bifidobacteriaceae bacterium MCC01975 3
species Bifidobacteriaceae bacterium MCC01976 3
species Bifidobacteriaceae bacterium MCC01977 3
species Bifidobacteriaceae bacterium MCC01978 3
species Bifidobacteriaceae bacterium MCC01979 3
species Bifidobacteriaceae bacterium MCC01983 3
species Bifidobacteriaceae bacterium MCC01984 3
species Bifidobacteriaceae bacterium MCC01986 3
species Bifidobacteriaceae bacterium MCC01988 2
species Bifidobacteriaceae bacterium MCC01989 3
species Bifidobacteriaceae bacterium MCC01990 3
species Bifidobacteriaceae bacterium MCC01992 2
species Bifidobacteriaceae bacterium MCC01993 2
species Bifidobacteriaceae bacterium MCC01994 2
species Bifidobacteriaceae bacterium MCC01995 2
species Bifidobacteriaceae bacterium MCC01996 2
species Bifidobacteriaceae bacterium MCC01998 2
species Bifidobacteriaceae bacterium MCC02032 2
species Bifidobacteriaceae bacterium MCC02033 2
species Bifidobacteriaceae bacterium MCC02034 2
species Bifidobacteriaceae bacterium MCC02035 2
species Bifidobacteriaceae bacterium MCC02037 2
species Bifidobacterium actinocoloniiforme 194 65 2
species Bifidobacterium adolescentis 3780 5 210 276 24 1 16 29 8 6 5 6 2 3 3 1 1
species Bifidobacterium angulatum 822 4 244 10 4 12 1 3
species Bifidobacterium animalis 1095 181 157 250 11 6 11 18 1 3 2 1 2 2
species Bifidobacterium asteroides 1311 479 148 1 2 2 2 2
species Bifidobacterium avesanii 356
species Bifidobacterium biavatii 8 1
species Bifidobacterium bifidum 1033 683 162 272 13 4 7 26 5 3 3 2 3 2 1 1
species Bifidobacterium bohemicum 747 1
species Bifidobacterium bombi 560 783 2
species Bifidobacterium boum 256 765 1 1 2 1 1
species Bifidobacterium breve 1994 1 119 273 15 5 9 30 6 3 3 1
species Bifidobacterium catenulatum 1736 6 68 270 11 16 22 1 1 3 1 3 1
species Bifidobacterium choerinum 3053 2 83 189 8 8 4 2
species Bifidobacterium commune 531 1
species Bifidobacterium coryneforme 1
species Bifidobacterium cuniculi 924 1
species Bifidobacterium dentium 1645 1 58 228 15 8 13 3 3 3 3
species Bifidobacterium eulemuris 2
species Bifidobacterium faecale 1 3
species Bifidobacterium gallicum 2423 1 4 1
species Bifidobacterium imperatoris 1
species Bifidobacterium indicum 2438 583 6 1 4 2 2
species Bifidobacterium lemurum 627 2
species Bifidobacterium longum 3311 4 459 280 32 9 20 32 11 8 4 6 3 3 1
species Bifidobacterium magnum 154 722
species Bifidobacterium merycicum 153 5 1 2
species Bifidobacterium minimum 299
species Bifidobacterium mongoliense 370
species Bifidobacterium moukalabense 1
species Bifidobacterium myosotis 1
species Bifidobacterium phage PMBT6 22
species Bifidobacterium porcinum 1
species Bifidobacterium pseudocatenulatum 226 179 270 6 5 14 12 1 3 2 3 1
species Bifidobacterium pseudolongum 22 11 212 11 1 17 1 2 1
species Bifidobacterium pullorum 245 249 22 88 1 3 2 2 1
species Bifidobacterium reuteri 3 1
species Bifidobacterium ruminantium 290 344 1 10 2 5 1 2
species Bifidobacterium saguini 1 1 1
species Bifidobacterium scardovii 813 9 10 241 4 1 5 2
species Bifidobacterium sp. 2 24 10 3
species Bifidobacterium sp. 113 2
species Bifidobacterium sp. 120 6
species Bifidobacterium sp. 138 1
species Bifidobacterium sp. 65947 27
species Bifidobacterium sp. ESL0690 1 2
species Bifidobacterium sp. ESL0732 1 2
species Bifidobacterium sp. ESL0790 1 2
species Bifidobacterium sp. h12 1
species Bifidobacterium sp. JCM 6439 2
species Bifidobacterium sp. M45 1
species Bifidobacterium sp. MC_8 3
species Bifidobacterium sp. MSK.13.1 2
species Bifidobacterium sp. MSK.13.7 2
species Bifidobacterium sp. MSK.17.10 3
species Bifidobacterium sp. MSTE12 1 1
species Bifidobacterium sp. MSX5B 5
species Bifidobacterium sp. N5G01 4 1
species Bifidobacterium sp. PL1 3
species Bifidobacterium sp. UTBIF-68 1
species Bifidobacterium stellenboschense 4
species Bifidobacterium stercoris 48
species Bifidobacterium subtile 1695 373 1 1 3 2
species Bifidobacterium thermacidophilum 451 516 31 1
species Bifidobacterium thermophilum 609 230 2 223 1 1 1 2
species Bifidobacterium tissieri 4
species Bifidobacterium tsurumiense 202 40 2
species Bigelowiella natans 2 1
species Billgrantia campisalis 2
species Billgrantia tianxiuensis 46
species Bilophila sp. 4
species Bilophila sp. 4_1_30 89 3 19 4
species Bilophila wadsworthia 4123 267 520 176 23 28 19 1 9 18 8 7 6 4 1 1
species Biomaibacter acetigenes 186 2
species Biostraticola tofi 34
species Bipolaris maydis 1
species Bipolaris victoriae 1
species Birpovirus hiberniae 8 1
species Bisgaardia hudsonensis 116 28 1 1
species Bittarella massiliensis (ex Durand et al. 2017) 3 2 6 7 4
species Bizionia arctica 1
species Bizionia fulviae 1
species Bizionia saleffrena 2
species Bizionia sp. M204 1
species Blastochloris gulmargensis 17
species Blastochloris tepida 39 1 2
species Blastochloris viridis 16 1
species Blastococcus aggregatus 24 3 1
species Blastococcus haudaquaticus 1
species Blastococcus saxobsidens 6 1
species Blastococcus sp. PRF04-17 2
species Blastocystis hominis 1 17 1 1
species Blastocystis MELD virus 2
species Blastocystis ratti 1 2
species Blastocystis sp. 9
species Blastocystis sp. OSU25 1
species Blastocystis sp. subtype 1 4
species Blastocystis sp. subtype 2 3
species Blastocystis sp. subtype 3 2 1
species Blastocystis sp. subtype 4 13 1 1
species Blastocystis sp. subtype 6 1
species Blastocystis sp. subtype 7 2
species Blastocystis sp. subtype 9 1
species Blastomonas fulva 4
species Blastomonas natatoria 21
species Blastomonas sp. RAC04 3
species Blastomyces dermatitidis 1
species Blastomyces gilchristii 1 1
species Blastopirellula marina 3
species Blattabacterium cuenoti 2 2
species Blattabacterium punctulatus 1
species Blattabacterium sp. (Blaberus giganteus) 1
species Blattabacterium sp. (Blattella germanica) 1
species Blattabacterium sp. (Cryptocercus kyebangensis) 1
species Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 1
species Blattabacterium sp. (Nauphoeta cinerea) 1
species Blattabacterium sp. (Periplaneta americana) 1
species Blautia argi 271 9 3 30 3
species Blautia caecimuris 1 2 6 1
species Blautia coccoides 4643 4 84 19 3 7 5 7
species Blautia difficilis 4 1
species Blautia faecicola 1 7 1
species Blautia faecis 1 1533 718 9 3 9 4 1
species Blautia fusiformis 4
species Blautia glucerasea 3927 1236 226 1 5 12 8 6 4 1
species Blautia hansenii 4644 942 252 23 15 17 11 4 7 6 1 3 1
species Blautia hominis 1 2
species Blautia hydrogenotrophica 3463 1533 198 86 9 12 14 9 7 1 1
species Blautia intestinalis 1 1 1
species Blautia lenta 3
species Blautia liquoris 1 3
species Blautia luti 1 1513 672 1 7 20 6 9 4 1
species Blautia marasmi 1 1
species Blautia massiliensis (ex Durand et al. 2017) 11 3 11 13 4 2 1
species Blautia obeum 4380 1524 2 275 31 34 28 26 9 25 7 4 4 3 2 1
species Blautia parvula 2 3
species Blautia producta 3465 1501 75 274 10 22 31 8 3 1 2 4 3 2 1 1
species Blautia provencensis 1
species Blautia pseudococcoides 1 8 21 3 1
species Blautia schinkii 3872 1210 9 95 5 1 5 7 4 1
species Blautia segnis 4
species Blautia sp. 1 3 4
species Blautia sp. 1001283B150304_161114_C9 4
species Blautia sp. 210702-DFI.1.159 4
species Blautia sp. 210820-DFI.6.14 4
species Blautia sp. aa_0143 4
species Blautia sp. AF13-16 1
species Blautia sp. AF14-40 4
species Blautia sp. AF17-9LB 4
species Blautia sp. AF19-1 4
species Blautia sp. AF19-10LB 2 4 1
species Blautia sp. AF19-13LB 4 1
species Blautia sp. AF19-34 4 1
species Blautia sp. AF22-5LB 4 1
species Blautia sp. AF25-12LB 4
species Blautia sp. AF26-2 4 1
species Blautia sp. AF32-4BH 5 4 1
species Blautia sp. AF34-10 4
species Blautia sp. AM16-16B 4
species Blautia sp. AM22-22LB 4
species Blautia sp. AM23-13AC 4 1
species Blautia sp. AM28-10 4
species Blautia sp. AM28-27 4
species Blautia sp. AM28-36 4
species Blautia sp. AM29-29 4
species Blautia sp. AM42-2 4 1
species Blautia sp. AM46-3MH 4
species Blautia sp. AM46-5 4 1
species Blautia sp. AM47-4 4 1
species Blautia sp. An249 1
species Blautia sp. AUH-JLD3 1
species Blautia sp. BCRC 81119 4
species Blautia sp. BIOML-A1 1 1
species Blautia sp. CAG:237 4
species Blautia sp. CAG:257 1
species Blautia sp. CAG:37 4
species Blautia sp. CAG:37_48_57 4
species Blautia sp. CAG:52 4
species Blautia sp. DFI.1.216 4 1
species Blautia sp. DFI.3.45 4
species Blautia sp. DFI.4.84 4
species Blautia sp. DFI.6.71 4
species Blautia sp. DFI.9.10 4
species Blautia sp. DFI.9.9 4
species Blautia sp. KLE 1732 18 4
species Blautia sp. KLE_1732_HM_1032 4 2
species Blautia sp. LMAG:14 4
species Blautia sp. LMAG:30 4
species Blautia sp. LMAG:36 4
species Blautia sp. LMAG:62 4
species Blautia sp. LMAG:69 4
species Blautia sp. LMAG:77 4
species Blautia sp. LMAG:89 4
species Blautia sp. Marseille-P2398 2 2 4
species Blautia sp. Marseille-P3087 1 4 1
species Blautia sp. Marseille-P3201T 1
species Blautia sp. Marseille-P3387 1
species Blautia sp. Marseille-P3702 1
species Blautia sp. MB18-30 4
species Blautia sp. MC_32 1
species Blautia sp. MCC269 2
species Blautia sp. MCC270 4
species Blautia sp. MCC283 1
species Blautia sp. MCC289 4 1
species Blautia sp. MSJ-19 1
species Blautia sp. MSJ-36 2
species Blautia sp. MSJ-9 1
species Blautia sp. MSK.18.38 4
species Blautia sp. MSK.20.85 1
species Blautia sp. MSK.21.1 2
species Blautia sp. MSK17_66 1
species Blautia sp. MSK18_10 4
species Blautia sp. MSK20_18 4
species Blautia sp. MSK22_86 1
species Blautia sp. NOVO1-10 1
species Blautia sp. NSJ-140 4
species Blautia sp. NSJ-157 4
species Blautia sp. NSJ-166 1
species Blautia sp. OF03-13 4 1
species Blautia sp. OF03-15BH 3 1
species Blautia sp. OF09-25XD 4
species Blautia sp. OF11-22 3 4
species Blautia sp. OM05-6 4
species Blautia sp. OM06-15AC 2 4
species Blautia sp. OM07-19 4 1
species Blautia sp. SC05B48 273 28 28 4 3
species Blautia sp. Ser5 61 6
species Blautia sp. Ser8 3 63 1 1
species Blautia sp. SF-50 4
species Blautia sp. SG-772 4 1
species Blautia sp. TF10-30 4
species Blautia sp. TF11-31AT 4
species Blautia sp. TF12-12AT 4
species Blautia sp. TF12-31AT 4
species Blautia sp. TM10-2 4
species Blautia sp. YHC-4 3 375 1 1 16
species Blautia stercoris 1090 200 7 5 1 2 1
species Blautia tarda 4 1
species Blautia wexlerae 4647 1528 752 19 6 29 2 9 21 7 4 3 1 1
species Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 1
species Blohavirus americanus 8 1
species Blumeria graminis 1
species Bogoriella caseilytica 10
species Bombilactobacillus bombi 27 7 2
species Bombilactobacillus folatiphilus 2
species Bombilactobacillus mellifer 100
species Bombilactobacillus mellis 40
species Bombilactobacillus thymidiniphilus 2
species Bombiscardovia coagulans 17
species Bordetella ansorpii 2
species Bordetella avium 43 1
species Bordetella bronchialis 79 3 1
species Bordetella bronchiseptica 3 1
species Bordetella flabilis 43 1 1
species Bordetella genomosp. 13 91 1
species Bordetella genomosp. 6 1
species Bordetella genomosp. 8 62 1
species Bordetella genomosp. 9 79 1
species Bordetella hinzii 47 1
species Bordetella holmesii 26 1
species Bordetella parapertussis 2
species Bordetella petrii 41 1 1
species Bordetella pseudohinzii 12
species Bordetella sp. H567 33 1 1
species Bordetella sp. J329 1 1
species Bordetella sp. N 80 1
species Bordetella trematum 115 1 1
species Borrelia anserina 7
species Borrelia coriaceae 1
species Borrelia coriaceae Co53 1
species Borrelia crocidurae 1
species Borrelia duttonii 1
species Borrelia hermsii 1
species Borrelia miyamotoi 1 2 1 4 1
species Borrelia sp. HM 1
species Borrelia turcica 1
species Borrelia turicatae 1
species Borreliella afzelii 8 2
species Borreliella garinii 1
species Borreliella valaisiana 1
species Bosea sp. ANAM02 31
species Bosea sp. AS-1 26 2 1
species Bosea sp. BIWAKO-01 1
species Bosea sp. F3-2 59 1
species Bosea sp. PAMC 26642 18 1 2
species Bosea sp. RAC05 30 1 2
species Bosea sp. Tri-49 22 1 2
species Bosea thiooxidans 1
species Bosea vaviloviae 34 1
species Boseongicola aestuarii 2
species Boseongicola sp. CCM32 7
species Botrytis cinerea 23 8 1
species Botrytis sinoallii 1
species Boudabousia marimammalium 20
species Boudabousia tangfeifanii 42 2
species Bowdeniella nasicola 24
species Brachybacterium arcticum 30
species Brachybacterium avium 38 1
species Brachybacterium conglomeratum 4
species Brachybacterium faecium 6 34 1 1
species Brachybacterium fresconis 1
species Brachybacterium ginsengisoli 18 2 2
species Brachybacterium huguangmaarense 1 2
species Brachybacterium kimchii 1
species Brachybacterium muris 3
species Brachybacterium nesterenkovii 1
species Brachybacterium saurashtrense 5 49 1
species Brachybacterium sp. P6-10-X1 31 1 2
species Brachybacterium sp. S26 5
species Brachybacterium sp. SGAir0954 37
species Brachybacterium sp. Z12 1
species Brachybacterium squillarum 15
species Brachybacterium tyrofermentans 9 7
species Brachybacterium vulturis 29 1 1
species Brachymonas chironomi 4
species Brachyspira aalborgi 5 11 4
species Brachyspira alvinipulli 4
species Brachyspira hampsonii 12 2
species Brachyspira hyodysenteriae 64 5 1
species Brachyspira ibaraki 35
species Brachyspira intermedia 17 4 2
species Brachyspira murdochii 51 2 2
species Brachyspira muris 2
species Brachyspira pilosicoli 135 1 4 2
species Brachyspira sp. NSH-25 2
species Brackiella oedipodis 7 2 1
species Bradymonas sediminis 45 1 1
species Bradyrhizobiaceae bacterium SG-6C 1
species Bradyrhizobium amphicarpaeae 12
species Bradyrhizobium betae 20
species Bradyrhizobium canariense 22
species Bradyrhizobium commune 1
species Bradyrhizobium cosmicum 15
species Bradyrhizobium cytisi 1
species Bradyrhizobium diazoefficiens 16 2
species Bradyrhizobium elkanii 6 44
species Bradyrhizobium erythrophlei 113 1
species Bradyrhizobium genosp. L 1
species Bradyrhizobium guangdongense 19 1
species Bradyrhizobium guangxiense 21 1
species Bradyrhizobium guangzhouense 17 1
species Bradyrhizobium icense 29 1 1
species Bradyrhizobium japonicum 2 1 23 2 1
species Bradyrhizobium lablabi 16 1
species Bradyrhizobium liaoningense 1
species Bradyrhizobium oligotrophicum 22 1
species Bradyrhizobium ontarionense 1
species Bradyrhizobium ottawaense 2 1
species Bradyrhizobium pachyrhizi 57
species Bradyrhizobium paxllaeri 18
species Bradyrhizobium sediminis 1
species Bradyrhizobium sp. 18 3
species Bradyrhizobium sp. 1(2017) 15
species Bradyrhizobium sp. 170 1
species Bradyrhizobium sp. 4 1
species Bradyrhizobium sp. 6(2017) 49
species Bradyrhizobium sp. ARR65 1
species Bradyrhizobium sp. BTAi1 38 1 1
species Bradyrhizobium sp. CCBAU 051011 24
species Bradyrhizobium sp. CCBAU 53380 3
species Bradyrhizobium sp. CCBAU 53421 1
species Bradyrhizobium sp. CCGE-LA001 25 1 1
species Bradyrhizobium sp. CIAT3101 1
species Bradyrhizobium sp. LCT2 9
species Bradyrhizobium sp. ML527 1
species Bradyrhizobium sp. ORS 278 31 1
species Bradyrhizobium sp. ORS 285 23 1
species Bradyrhizobium sp. SK17 55 1
species Bradyrhizobium sp. TM102 5
species Bradyrhizobium sp. WBAH10 1
species Bradyrhizobium sp. WD16 1
species Bradyrhizobium symbiodeficiens 25
species Bradyrhizobium vignae 17 1
species Bradyrhizobium viridifuturi 1
species Bradyrhizobium yuanmingense 1
species Bradyrhizobium zhanjiangense 26 1
species Brassicibacter mesophilus 1115 2 4
species Brassicibacter thermophilus 45 1 1
species Bremerella alba 1
species Bremerella cremea 13
species Bremerella volcania 2 1
species Brenneria alni 390
species Brenneria goodwinii 60 2
species Brenneria izadpanahii 2
species Brenneria nigrifluens 38 40 1 2
species Brenneria rubrifaciens 157 41 1
species Brenneria salicis 24 59
species Brenneria sp. EniD312 1
species Breoghania sp. L-A4 45 2 1
species Brettanomyces bruxellensis 1
species Brevefilum fermentans 61 1 2
species Brevibacillus agri 2
species Brevibacillus brevis 1 8 215 1 4 2
species Brevibacillus centrosporus 1
species Brevibacillus choshinensis 2 2
species Brevibacillus composti 1 2
species Brevibacillus fluminis 48
species Brevibacillus formosus 3 5 1
species Brevibacillus fulvus 28
species Brevibacillus ginsengisoli 662 1
species Brevibacillus humidisoli 2
species Brevibacillus laterosporus 20 211 1 1 2
species Brevibacillus marinus 147 1 2
species Brevibacillus panacihumi 4
species Brevibacillus reuszeri 1
species Brevibacillus ruminantium 2
species Brevibacillus sp. DP1.3A 1
species Brevibacillus sp. WF146 1 2
species Brevibacillus thermoruber 11 1
species Brevibacterium album 37 5
species Brevibacterium antarcticum 1
species Brevibacterium antiquum 7
species Brevibacterium atlanticum 24
species Brevibacterium aurantiacum 95 2
species Brevibacterium aureum 3
species Brevibacterium avium 1 3
species Brevibacterium casei 6
species Brevibacterium limosum 15
species Brevibacterium linens 4 74 2
species Brevibacterium luteolum 73 1 1
species Brevibacterium massiliense 5
species Brevibacterium mcbrellneri 123 52 1
species Brevibacterium paucivorans 119 1 44
species Brevibacterium permense 1
species Brevibacterium pigmentatum 14
species Brevibacterium ravenspurgense 35 19 22
species Brevibacterium samyangense 20 2 1
species Brevibacterium sandarakinum 78 54
species Brevibacterium siliguriense 19
species Brevibacterium sp. CS2 41
species Brevibacterium sp. 'Marine' 11
species Brevibacterium sp. MBTD_CMFRI_Br02 1
species Brevibacterium zhoupengii 1 1
species Brevifollis gellanilyticus 27
species Brevinema andersonii 6 1
species Brevirhabdus pacifica 13 1
species Brevundimonas abyssalis 1
species Brevundimonas aurantiaca 3
species Brevundimonas aveniformis 2
species Brevundimonas bullata 4
species Brevundimonas diminuta 12 15 1 7
species Brevundimonas mediterranea 4
species Brevundimonas naejangsanensis 78 1 1
species Brevundimonas nasdae 1
species Brevundimonas olei 81
species Brevundimonas poindexterae 1
species Brevundimonas sp. 9
species Brevundimonas sp. DS20 1 1
species Brevundimonas sp. FXJ8.080 1
species Brevundimonas sp. GW460-12-10-14-LB2 3 1
species Brevundimonas sp. LM2 23 1
species Brevundimonas sp. M20 14 1
species Brevundimonas sp. MF30-B 11 2 1
species Brevundimonas sp. 'scallop' 3
species Brevundimonas sp. SGAir0440 4
species Brevundimonas sp. V3M6 3
species Brevundimonas staleyi 19 2
species Brevundimonas subvibrioides 5 1
species Brevundimonas terrae 5 1
species Brevundimonas vancanneytii 2
species Brevundimonas vesicularis 5 1
species Breznakia blatticola 3
species Breznakia pachnodae 1
species Breznakibacter xylanolyticus 21 4 4 2
species Breznakiella homolactica 2
species Brigitvirus brigit 129
species Brochothrix campestris 3
species Brochothrix thermosphacta 2592 1 79 1 1 2
species Brockia lithotrophica 44
species Brotaphodocola catenula 1
species Brucella abortus 1
species Brucella anthropi 2 91 1
species Brucella intermedia 2
species Brucella ovis 1
species Brucella pecoris 1
species Brucella pituitosa 1 1
species Brucella pseudintermedia 1
species Brucella pseudogrignonensis 2 3 1
species Brucella rhizosphaerae 3
species Brucella thiophenivorans 24
species Brucella tritici 1 4
species Brucepastera parasyntrophica 1 2
species Brussowvirus ALQ132 2
species Brussowvirus bvO1205 3
species Brussowvirus Sfi11 1
species Bryobacter aggregatus 8
species Bryocella elongata 4
species Buchavirus faecalis 8
species Buchnera aphidicola 233 1 5 2
species Bufavirus-1 5
species Bulboplastis apyrenoidosa 1
species Bulleidia extructa 163 90 2 1
species Bulleidia sp. zg-1006 1 2
species Burkholderia ambifaria 12
species Burkholderia anthina 1
species Burkholderia cenocepacia 78 1
species Burkholderia cepacia 83 1 1 2
species Burkholderia contaminans 13 2
species Burkholderia diffusa 10
species Burkholderia gladioli 83 2 1
species Burkholderia glumae 29 2
species Burkholderia lata 7 30
species Burkholderia latens 6 1
species Burkholderia mallei 15 2
species Burkholderia mayonis 11 1
species Burkholderia metallica 14
species Burkholderia multivorans 4 2 99 1 2
species Burkholderia oklahomensis 2 13 1
species Burkholderia plantarii 19 1 1
species Burkholderia pseudomallei 37 2 2
species Burkholderia pseudomultivorans 9 8
species Burkholderia pyrrocinia 26 2
species Burkholderia savannae 1 2
species Burkholderia seminalis 38 14 1
species Burkholderia sp. 1
species Burkholderia sp. AD24 28 3
species Burkholderia sp. BDU8 1
species Burkholderia sp. Bp7605 30 1 2
species Burkholderia sp. CCGE1003 12 1
species Burkholderia sp. HB1 4
species Burkholderia sp. IDO3 27 1 1
species Burkholderia sp. JP2-270 10 1
species Burkholderia sp. K4410.MGS-135 3
species Burkholderia sp. KBS0801 1
species Burkholderia sp. KJ006 1
species Burkholderia sp. KK1 7 1
species Burkholderia sp. LA-2-3-30-S1-D2 10 1
species Burkholderia sp. MBR-1 3
species Burkholderia sp. MSMB0856 10 3
species Burkholderia sp. MSMB617WGS 1
species Burkholderia sp. NRF60-BP8 18 3
species Burkholderia sp. OLGA172 1
species Burkholderia sp. PAMC 26561 3 1 1
species Burkholderia sp. PAMC 28687 3
species Burkholderia sp. RPE67 3
species Burkholderia sp. THE68 25
species Burkholderia sp. YI23 4
species Burkholderia stabilis 37
species Burkholderia stagnalis 36
species Burkholderia territorii 17 1
species Burkholderia thailandensis 11 41 1
species Burkholderia ubonensis 11 60 2 2 1
species Burkholderia vietnamiensis 6 16
species Burkholderiaceae bacterium 65
species Burkholderiales bacterium 4
species Burkholderiales bacterium 1_1_47 3 23 4
species Burkholderiales bacterium GJ-E10 65
species Burkholderiales bacterium JOSHI_001 3
species Burkholderiales bacterium YL45 219 2 4
species Buttiauxella agrestis 37 1
species Buttiauxella ferragutiae 8 1
species Buttiauxella sp. 3AFRM03 21 1
species butyrate-producing bacterium 4
species butyrate-producing bacterium A1-86 2
species butyrate-producing bacterium A2-166 1
species butyrate-producing bacterium A2-175 1 1
species butyrate-producing bacterium A2-207 1
species butyrate-producing bacterium A2-232 1
species butyrate-producing bacterium ART55/1 2
species butyrate-producing bacterium GM2/1 1
species butyrate-producing bacterium L2-12 1 1
species butyrate-producing bacterium L2-21 1
species butyrate-producing bacterium L2-50 143 1
species butyrate-producing bacterium M50/1 1
species butyrate-producing bacterium M62/1 1
species butyrate-producing bacterium PH05YA09 2 1
species butyrate-producing bacterium SL6/1/1 1
species butyrate-producing bacterium SM4/1 270 1 7 1
species butyrate-producing bacterium SM6/1 2 1
species butyrate-producing bacterium SR1/1 1 1
species butyrate-producing bacterium SS3/4 275 8 27 17 4
species butyrate-producing bacterium T2-132 1
species butyrate-producing bacterium YE53 1
species Butyribacter intestini 2 2 2 1 1 2
species Butyricicoccus faecihominis 1 1 31 4 1
species Butyricicoccus intestinisimiae 1
species Butyricicoccus porcorum 1 1 1
species Butyricicoccus pullicaecorum 949 73 1 8 1 18 8 3 4 4 2 1
species Butyricicoccus sp. 4
species Butyricicoccus sp. AF10-3 4 1
species Butyricicoccus sp. AF15-40 4
species Butyricicoccus sp. AF22-28AC 4 1
species Butyricicoccus sp. AF24-19AC 4 1
species Butyricicoccus sp. AF35-5AC 4 1
species Butyricicoccus sp. AM05-1 4
species Butyricicoccus sp. AM18-35 4
species Butyricicoccus sp. AM27-36 4 1
species Butyricicoccus sp. AM28-25 4 1
species Butyricicoccus sp. AM29-23AC 4
species Butyricicoccus sp. AM32-19 2 4
species Butyricicoccus sp. AM42-5AC 2 4 1
species Butyricicoccus sp. BIOML-A1 4 1
species Butyricicoccus sp. GAM44 222 3 4
species Butyricicoccus sp. K4410.MGS-46 4
species Butyricicoccus sp. N15.MGS-46 4
species Butyricicoccus sp. N54.MGS-46 4
species Butyricicoccus sp. OF10-2 4 1
species Butyricicoccus sp. OF13-6 4 1
species Butyricicoccus sp. OM04-18BH 3 2 4
species Butyricicoccus sp. OM06-6AC 4 1
species Butyricicoccus sp. TM10-16AC 4 1
species Butyricimonas faecalis 272 9 22 3 1 3
species Butyricimonas faecihominis 573 304 40 4 5 3 2
species Butyricimonas paravirosa 559 47 3 6 3 3
species Butyricimonas phoceensis 20
species Butyricimonas sp. 3
species Butyricimonas sp. 180-3 18 14
species Butyricimonas sp. 214-4 269
species Butyricimonas sp. An62 3 3
species Butyricimonas sp. BSD2780061689_150309_C8 3
species Butyricimonas sp. GD2 34 1
species Butyricimonas sp. Marseille-P2440 1
species Butyricimonas sp. S479 1
species Butyricimonas synergistica 1949 222 16 2 2 1 3 10 5 2
species Butyricimonas vaginalis 1
species Butyricimonas virosa 2308 589 228 62 8 6 10 2 3 4 6 2 3
species Butyrivibrio crossotus 1006 34 4 4 24 2 4 1 7 6 3 1
species Butyrivibrio fibrisolvens 1 1087 269 10 19 26 1 1 3
species Butyrivibrio hungatei 15 722 269 9 25 2 3 1
species Butyrivibrio proteoclasticus 3100 200 270 12 22 7 3 1
species Butyrivibrio sp. AD3002 1
species Butyrivibrio sp. AE2032 1
species Butyrivibrio sp. CB08 1
species Butyrivibrio sp. INlla18 1
species Butyrivibrio sp. LB2008 1
species Butyrivibrio sp. MB2005 1
species Butyrivibrio sp. NC3005 1
species Butyrivibrio sp. VCB2006 1
species Butyrivibrio sp. VCD2006 1
species Butyrivibrio sp. WCD3002 1
species Butyrivibrio sp. XPD2002 1
species Butyrivibrio sp. XPD2006 1
species Butyrivibrio sp. YAB3001 1
species Byrnievirus HK97 1
species Bythopirellula goksoeyrii 17 1
species Caballeronia glathei 15
species Caballeronia grimmiae 1
species Caballeronia insecticola 43 4
species Caballeronia jiangsuensis 4
species Caballeronia sp. Sq4a 1
species Caballeronia udeis 2
species Caballeronia zhejiangensis 1 1
species Caedibacter taeniospiralis 2
species Caenibius tardaugens 5 1
species Caenispirillum salinarum 1
species Caenorhabditis briggsae 1
species Caenorhabditis elegans 1
species Caenorhabditis inopinata 1
species Caenorhabditis remanei 1
species Caldalkalibacillus mannanilyticus 2 1
species Caldalkalibacillus thermarum 30 1 2 2
species Caldalkalibacillus uzonensis 4
species Caldanaerobacter hydrothermalis 157
species Caldanaerobacter subterraneus 102 1 134 2 1 2
species Caldanaerobius fijiensis 5
species Caldanaerobius polysaccharolyticus 1
species Caldanaerobius zeae 3
species Caldanaerovirga acetigignens 7
species Caldibacillus thermoamylovorans 8 119 3 2
species Caldicellulosiruptor acetigenus 2
species Caldicellulosiruptor bescii 639 1 3 1 1
species Caldicellulosiruptor changbaiensis 20 2 2
species Caldicellulosiruptor diazotrophicus 2 1
species Caldicellulosiruptor hydrothermalis 21 1 2
species Caldicellulosiruptor kronotskyensis 1 1
species Caldicellulosiruptor morganii 2
species Caldicellulosiruptor naganoensis 2
species Caldicellulosiruptor obsidiansis 18 1 2
species Caldicellulosiruptor owensensis 8 89 16 2 4 6 2
species Caldicellulosiruptor saccharolyticus 1 9 1 2
species Caldichromatium japonicum 15 2
species Caldicoprobacter guelmensis 1
species Caldilinea aerophila 52 3 2
species Caldilinea tarbellica 1490 12 7
species Caldimicrobium rimae 3 1
species Caldimicrobium thiodismutans 1 1
species Caldimonas brevitalea 13 2
species Caldimonas hydrothermale 25
species Caldimonas thermodepolymerans 2
species Caldinitratiruptor microaerophilus 432 1 3 2
species Caldisalinibacter kiritimatiensis 762 3
species Caldisericum exile 3 9 10 1 1
species Caldisphaera draconis 3
species Calditerricola satsumensis 8
species Calditerrivibrio nitroreducens 7 20 1 1 2
species Caldithrix abyssi 2 3 60 1 2
species Caldithrix palaeochoryensis 45 2
species Caldivirga maquilingensis 4 1
species Callithamnion tetricum 1
species Calochaete cimrmanii 18
species Calonectria ilicicola 1
species Caloramator australicus 105 240 2 5
species Caloramator boliviensis 4 1
species Caloramator coolhaasii 7 2
species Caloramator fervidus 4215 610 4 6
species Caloramator indicus 1749 1
species Caloramator mitchellensis 4401 135 5 1 7
species Caloramator proteoclasticus 3
species Caloramator quimbayensis 145 2
species Caloramator sp. Dgby_cultured_2 1 2
species Caloramator sp. E03 246 1 2
species Caloramator sp. mosi_1 2 2
species Caloramator uzoniensis 2492 1 1 2
species Caloramator viterbiensis 298 1
species Caloranaerobacter azorensis 197 2 2
species Caloribacterium cisternae 19
species Calothrix brevissima 1
species Calothrix elsteri 75 3
species Calothrix parasitica 2
species Calothrix parietina 1207 2 1 5
species Calothrix sp. 336/3 1
species Calothrix sp. NIES-2098 2
species Calothrix sp. NIES-2100 2
species Calothrix sp. NIES-3974 1 2
species Calothrix sp. NIES-4071 2
species Calothrix sp. PCC 6303 1 1
species Camelimonas abortus 1
species Caminibacter hydrogeniphilus 2 4
species Caminibacter mediatlanticus 9 1
species Caminibacter pacificus 1
species Caminibacter profundus 2
species Caminicella sporogenes 971 1
species Campylobacter armoricus 3
species Campylobacter avium 4 1 4 1
species Campylobacter blaseri 15 2
species Campylobacter canadensis 134 1 6 6 1
species Campylobacter coli 18 258 1 1 5 2
species Campylobacter concisus 231 15 49 82 2 3 1 2 2 2
species Campylobacter corcagiensis 1 45 1
species Campylobacter cuniculorum 2 1 1
species Campylobacter curvus 45 12 28 1 2
species Campylobacter faecalis 89 1
species Campylobacter fetus 100 4 2
species Campylobacter geochelonis 28 1 1
species Campylobacter gracilis 79 57 9 23 1 2
species Campylobacter helveticus 13 1 5
species Campylobacter hepaticus 3 1 1
species Campylobacter hominis 816 265 143 123 2 2 5 3 2
species Campylobacter hyointestinalis 1 2 13 1 2
species Campylobacter iguaniorum 5 1 1
species Campylobacter insulaenigrae 16 1 1
species Campylobacter jejuni 4 270 22 10 1 1
species Campylobacter lanienae 1 1 2
species Campylobacter lari 55 1 1 2
species Campylobacter mucosalis 33 78 1 7 2
species Campylobacter novaezeelandiae 1 2
species Campylobacter peloridis 8 2 2 5 1
species Campylobacter pinnipediorum 17 3 2
species Campylobacter porcelli 3 1
species Campylobacter rectus 3 3 33 1
species Campylobacter showae 43 3 120 1
species Campylobacter sp. 3
species Campylobacter sp. 10_1_50 5
species Campylobacter sp. 19-13652 1
species Campylobacter sp. CCUG 57310 3 2
species Campylobacter sp. CFSAN093226 1
species Campylobacter sp. FOBRC14 1
species Campylobacter sp. FOBRC15 1
species Campylobacter sp. NCTC 13003 1
species Campylobacter sp. RM12651 1
species Campylobacter sp. RM16187 2
species Campylobacter sp. RM16192 1
species Campylobacter sp. RM16704 1
species Campylobacter sp. RM5004 1 2
species Campylobacter sp. RM6914 9 1
species Campylobacter sputorum 13 34 2 2
species Campylobacter subantarcticus 1 1
species Campylobacter troglodytis 1 8
species Campylobacter upsaliensis 3 2 1
species Campylobacter ureolyticus 486 201 131 162 1 1 1 5 1
species Campylobacter vicugnae 1 1
species Campylobacter volucris 20 1
species Candida albicans 21 9 6
species Candida dubliniensis 8 2
species Candida orthopsilosis 1 1
species Candida parapsilosis 19 4
species Candida tropicalis 1 1
species candidate division TM7 single-cell isolate TM7b 1
species Candidatus Absconditicoccus praedator 1
species Candidatus Accumulibacter phosphatis 69 3
species Candidatus Accumulibacter regalis 25 3
species Candidatus Aciduliprofundum boonei 2
species Candidatus Actinomarina minuta 5
species Candidatus Acutalibacter ornithocaccae 2
species Candidatus Acutalibacter stercoravium 1
species Candidatus Agathobaculum merdavium 1
species Candidatus Alectryocaccomicrobium excrementavium 1
species Candidatus Alistipes avistercoris 1
species Candidatus Alistipes pullistercoris 2
species Candidatus Alistipes stercoripullorum 3
species Candidatus Allobeggiatoa halophila 4
species Candidatus Allobutyricicoccus pentlandensis 1
species Candidatus Allocopromorpha excrementipullorum 1
species Candidatus Amoebophilus asiaticus 4330 3 2 1 1 5 1
species Candidatus Anaerobutyricum stercoripullorum 1
species Candidatus Anaeromassilibacillus stercoravium 4
species Candidatus Anammoxoglobus propionicus 1
species Candidatus Annandia adelgestsuga 2
species Candidatus Annandia pinicola 1
species Candidatus Aphodovivens avicola 2
species Candidatus Aquiluna rubra 2
species Candidatus Aquiluna sp. UB-MaderosW2red 3
species Candidatus Arthromitus sp. SFB-mouse 5 2
species Candidatus Arthromitus sp. SFB-mouse-NL 1 1
species Candidatus Arthromitus sp. SFB-rat-Yit 61 2 2
species Candidatus Atelocyanobacterium thalassa 1 2
species Candidatus Avimicrobium caecorum 4
species Candidatus Avimonas narfae 3
species Candidatus Azobacteroides pseudotrichonymphae 317 121 4 1
species Candidatus Babela massiliensis 2 2
species Candidatus Bandiella numerosa 2
species Candidatus Bipolaricaulis anaerobius 1
species Candidatus Blautia gallistercoris 2
species Candidatus Blautia pullicola 1
species Candidatus Blochmannia castaneus 160
species Candidatus Blochmanniella camponoti 531
species Candidatus Blochmanniella chromaiodes 1
species Candidatus Blochmanniella floridana 2
species Candidatus Blochmanniella myrmotrichis 157
species Candidatus Blochmanniella pennsylvanica 2 1
species Candidatus Blochmanniella vafra 185 1 2
species Candidatus Borkfalkia ceftriaxoniphila 1
species Candidatus Borkfalkia excrementavium 1
species Candidatus Borkfalkia stercoripullorum 1
species Candidatus Caccoplasma intestinavium 2
species Candidatus Campylobacter infans 1 2
species Candidatus Cardinium hertigii 1
species Candidatus Carsonella ruddii 2 1
species Candidatus Chazhemtobacterium aquaticus 1
species Candidatus Chromulinivorax destructor 8 1 1
species Candidatus Cibiobacter qucibialis 4
species Candidatus Cloacimonas acidaminovorans 13 2 2
species Candidatus Comchoanobacter bicostacola 1
species Candidatus Contubernalis alkalaceticus 669 5 2
species Candidatus Copromonas avistercoris (nom. illeg.) 1
species Candidatus Copromonas faecavium (nom. illeg.) 1
species Candidatus Coproplasma stercorigallinarum 1
species Candidatus Coprovicinus avistercoris 2
species Candidatus Cytomitobacter indipagum 1
species Candidatus Dadabacteria bacterium 3
species Candidatus Desulfofervidus auxilii 1
species Candidatus Desulforudis audaxviator 142 1 2
species Candidatus Desulfovibrio trichonymphae 124 4 5 2
species Candidatus Doolittlea endobia 4
species Candidatus Dorea massiliensis 1 1 1
species Candidatus Duodenibacillus intestinigallinarum 1
species Candidatus Egerieenecus merdigallinarum 2
species Candidatus Eisenbergiella intestinigallinarum 1
species Candidatus Endobugula glebosa 33
species Candidatus Endobugula sertula 39
species Candidatus Endolissoclinum faulkneri 2 1
species Candidatus Endomicrobiellum trichonymphae 8 2
species Candidatus Endoriftia persephone 2
species Candidatus Enterenecus faecium 1
species Candidatus Enterocloster excrementigallinarum 2
species Candidatus Erwinia haradaeae 23 2
species Candidatus Excrementavichristensenella intestinipullorum 1
species Candidatus Faecaligallichristensenella faecipullorum 1
species Candidatus Fermentimicrarchaeum limneticum 1
species Candidatus Filomicrobium marinum 1 1
species Candidatus Fimihabitans intestinipullorum 1
species Candidatus Fimisoma avicola 1
species Candidatus Fluviicola riflensis 158 1
species Candidatus Fonsibacter ubiquis 1
species Candidatus Formimonas warabiya 179 1 2 1
species Candidatus Forterrea multitransposorum 1
species Candidatus Fournierella excrementavium 4
species Candidatus Frankia nodulisporulans 1
species Candidatus Fukatsuia symbiotica 3 2
species Candidatus Fusicatenibacter intestinipullorum 1
species Candidatus Gallacutalibacter pullicola 3
species Candidatus Gastranaerophilales bacterium 3
species Candidatus Gastranaerophilales bacterium HUM_10 2
species Candidatus Gastranaerophilales bacterium HUM_11 2
species Candidatus Gastranaerophilales bacterium HUM_12 1
species Candidatus Gastranaerophilales bacterium HUM_13 2
species Candidatus Gastranaerophilales bacterium HUM_14 1
species Candidatus Gastranaerophilales bacterium HUM_15 2
species Candidatus Gastranaerophilales bacterium HUM_16 2
species Candidatus Gastranaerophilales bacterium HUM_17 2
species Candidatus Gastranaerophilales bacterium HUM_18 2
species Candidatus Gastranaerophilales bacterium HUM_19 2
species Candidatus Gastranaerophilales bacterium HUM_21 2
species Candidatus Gastranaerophilales bacterium HUM_22 2
species Candidatus Gastranaerophilales bacterium HUM_23 2
species Candidatus Gastranaerophilales bacterium HUM_3 2
species Candidatus Gastranaerophilales bacterium HUM_4 2
species Candidatus Gastranaerophilales bacterium HUM_5 2
species Candidatus Gastranaerophilales bacterium HUM_6 1
species Candidatus Gastranaerophilales bacterium HUM_7 1
species Candidatus Gastranaerophilales bacterium HUM_8 2
species Candidatus Geddesella stercoravicola 2
species Candidatus Gemmiger faecavium 1
species Candidatus Glomeribacter gigasporarum 2
species Candidatus Gracilibacteria bacterium HOT-871 1
species Candidatus Gullanella endobia 2
species Candidatus Hamiltonella defensa 4 1
species Candidatus Hepatoplasma crinochetorum 1
species Candidatus Hoaglandella endobia 10
species Candidatus Hydrogenisulfobacillus filiaventi 128
species Candidatus Hydrogenosomobacter endosymbioticus 1
species Candidatus Ichthyocystis hellenicum 1
species Candidatus Intestinimonas pullistercoris 3
species Candidatus Ishikawella capsulata 1
species Candidatus Izimaplasma bacterium HR1 50 1
species Candidatus Karelsulcia muelleri 85 4 2
species Candidatus Kinetoplastibacterium blastocrithidii 1
species Candidatus Kinetoplastibacterium crithidii 2
species Candidatus Kinetoplastibacterium desouzaii 1
species Candidatus Kinetoplastibacterium galatii 1 1
species Candidatus Kinetoplastibacterium oncopeltii 1
species Candidatus Kinetoplastibacterium sorsogonicusi 1 1
species Candidatus Kleidoceria schneideri 1
species Candidatus Korarchaeum cryptofilum 1
species Candidatus Korobacter versatilis 92 1 2
species Candidatus Kuenenia stuttgartiensis 6 2
species Candidatus Legionella polyplacis 1
species Candidatus Liberibacter africanus 69 1 7
species Candidatus Liberibacter americanus 1
species Candidatus Liberibacter solanacearum 78 1 2
species Candidatus Limenecus avicola 2
species Candidatus Limiplasma merdipullorum 2
species Candidatus Magnetococcus massalia 127 1
species Candidatus Mailhella excrementigallinarum 1
species Candidatus Mailhella merdigallinarum 1
species Candidatus Malacoplasma girerdii 1
species Candidatus Mediterraneibacter excrementipullorum 1
species Candidatus Megaera polyxenophila 1
species Candidatus Melainabacteria bacterium 1
species Candidatus Melainabacteria bacterium MEL.A1 155 1 1
species Candidatus Merdibacter merdavium 1
species Candidatus Merdibacter merdigallinarum 1
species Candidatus Merdibacter merdipullorum 2
species Candidatus Merdiplasma excrementigallinarum 2
species Candidatus Merdisoma faecalis 1
species Candidatus Methanoliparum sp. LAM-1 1
species Candidatus Methanomassiliicoccus intestinalis 21 8 1 2
species Candidatus Methanoperedens nitroreducens 1
species Candidatus Methanoplasma termitum 2 2
species Candidatus Methylacidiphilum fumarolicum 1 1
species Candidatus Methylomirabilis oxygeniifera 16
species Candidatus Methylopumilus turicensis 4
species Candidatus Methylopumilus universalis 25
species Candidatus Methylospira mobilis 76 1
species Candidatus Midichloria mitochondrii 1 1
species Candidatus Minimicrobia vallesae 1 1
species Candidatus Moanabacter tarae 1
species Candidatus Moranella endobia 7
species Candidatus Mycobacterium methanotrophicum 1
species Candidatus Mycoplasma haematobovis 2
species Candidatus Mycoplasma haematominutum 14
species Candidatus Mycosynbacter amalyticus 2
species Candidatus Nanogingivalaceae bacterium 1
species Candidatus Nanohalobium constans 1
species Candidatus Nanopelagicus hibericus 1
species Candidatus Nanopusillus massiliensis 1
species Candidatus Nanosynbacter featherlites 7 2
species Candidatus Nanosynbacter lyticus 1
species Candidatus Nanosynbacter sp. HMT-352 1 1 1
species Candidatus Nanosyncoccus alces 1
species Candidatus Negativibacillus faecipullorum 1
species Candidatus Neochristensenella gallicola 1
species Candidatus Neoclostridium roslinense 1
species Candidatus Nitrosoglobus terrae 1
species Candidatus Nitrososphaera gargensis 4
species Candidatus Nitrosotenuis sp. DW1 1
species Candidatus Nitrospira inopinata 6 2
species Candidatus Nitrospira kreftii 5
species Candidatus Nitrotoga fabula 2
species Candidatus Nucleicultrix amoebiphila 1 1
species Candidatus Olsenella avistercoris 2
species Candidatus Orientia mediorientalis 3
species Candidatus Ornithobacterium hominis 2
species Candidatus Oscillibacter avistercoris 2
species Candidatus Oscillibacter excrementavium 1
species Candidatus Oscillibacter pullicola 1
species Candidatus Palibaumannia cicadellinicola 13 1 1
species Candidatus Pantoea carbekii 1
species Candidatus Paracaedibacter acanthamoebae 2
species Candidatus Pararuminococcus gallinarum 4
species Candidatus Parasutterella gallistercoris 1
species Candidatus Pelagibacter sp. FZCC0015 1
species Candidatus Pelagibacter sp. HIMB1321 1 1
species Candidatus Pelagibacter sp. IMCC9063 1 2
species Candidatus Pelagibacter sp. RS39 1
species Candidatus Pelagibacter sp. RS40 1
species Candidatus Pelagibacter ubique 7 1
species Candidatus Pelagisphaera phototrophica 2
species Candidatus Peribacter riflensis 30
species Candidatus Phaeomarinobacter ectocarpi 7
species Candidatus Phascolarctobacterium stercoravium 1
species Candidatus Phlomobacter fragariae 37
species Candidatus Phycorickettsia trachydisci 1
species Candidatus Phytoplasma asteris 1
species Candidatus Phytoplasma australiense 1
species Candidatus Phytoplasma brasiliense 54 1
species Candidatus Phytoplasma fragariae 60
species Candidatus Phytoplasma graminis 6
species Candidatus Phytoplasma luffae 1
species Candidatus Phytoplasma mali 1
species Candidatus Phytoplasma phoenicium 528 1
species Candidatus Phytoplasma pini 279 1
species Candidatus Phytoplasma prunorum 3427 2 1
species Candidatus Phytoplasma rubi 1
species Candidatus Phytoplasma ziziphi 1
species Candidatus Planktoluna difficilis 1
species Candidatus Planktophila dulcis 4
species Candidatus Planktophila lacus 13 1
species Candidatus Planktophila limnetica 2 1
species Candidatus Planktophila sulfonica 2
species Candidatus Planktophila versatilis 4 1
species Candidatus Portiera aleyrodidarum 16 2
species Candidatus Profftella armatura 1
species Candidatus Profftia sp. (ex Adelges kitamiensis) 1
species Candidatus Prometheoarchaeum syntrophicum 1 2
species Candidatus Promineifilum breve 210 1 1
species Candidatus Protochlamydia amoebophila 3 1
species Candidatus Protochlamydia naegleriophila 1 2
species Candidatus Protofrankia datiscae 13
species Candidatus Pseudobutyricicoccus lothianensis 2
species Candidatus Pseudomonas adelgestsugas 3
species Candidatus Pseudothioglobus singularis 1
species Candidatus Pullichristensenella excrementipullorum 3
species Candidatus Pullilachnospira gallistercoris 3
species Candidatus Puniceispirillum marinum 2 1 1
species Candidatus Regiella insecticola 2
species Candidatus Reidiella endopervernicosa 21 1
species Candidatus Rhabdochlamydia crassificans 419
species Candidatus Rhabdochlamydia oedothoracis 1
species Candidatus Rhodoluna planktonica 3 2
species Candidatus Rickettsiella viridis 2
species Candidatus Ruthenibacterium merdipullorum 3
species Candidatus Ruthia endofausta 1
species Candidatus Saccharibacteria bacterium 1
species Candidatus Saccharibacteria bacterium oral taxon 488 152
species Candidatus Saccharibacteria bacterium oral taxon 955 1
species Candidatus Saccharibacteria bacterium YM_S32_TM7_50_20 1
species Candidatus Saccharibacteria genomosp. TM7-H1 13
species Candidatus Saccharimonas aalborgensis 2
species Candidatus Scalindua brodae 39
species Candidatus Scatenecus faecavium 2
species Candidatus Scatocola faecigallinarum 1
species Candidatus Scatocola faecipullorum 1
species Candidatus Sodalis pierantonius 6 1 1
species Candidatus Solibacter usitatus 2 1
species Candidatus Spyradocola merdavium 2
species Candidatus Stoquefichus massiliensis 3
species Candidatus Stoquefichus sp. SB1 2
species Candidatus Sulfidibacterium hydrothermale 2
species Candidatus Sulfurimonas baltica 1 2
species Candidatus Sulfurimonas marisnigri 1
species Candidatus Symbiobacter mobilis 33 1 2
species Candidatus Syntrophocurvum alkaliphilum 44 2
species Candidatus Tachikawaea gelatinosa 1
species Candidatus Tammella caduceiae 1877 2 3
species Candidatus Tenderia electrophaga 111 1
species Candidatus Thiodictyon syntrophicum 152 2 2
species Candidatus Thiothrix anitrata 2
species Candidatus Thorarchaeota archaeon 1
species Candidatus Tokpelaia hoelldoblerii 13
species Candidatus Tremblaya princeps 1
species Candidatus Uabimicrobium amorphum 1 1
species Candidatus Uzinura diaspidicola 1
species Candidatus Vallotia cooleyia 1 1
species Candidatus Velamenicoccus archaeovorus 13 1 2
species Candidatus Viadribacter manganicus 4 1
species Candidatus Woesebacteria bacterium 1
species Candidatus Xianfuyuplasma coldseepsis 2
species Candidatus Xiphinematobacter sp. Idaho Grape 2
species Canhaevirus hiberniae 8 2
species Canicola haemoglobinophilus 131 3
species Capillimicrobium parvum 1 2
species Capnocytophaga canimorsus 70 3 2
species Capnocytophaga cynodegmi 12 9 1
species Capnocytophaga endodontalis 6 2
species Capnocytophaga gingivalis 12 1 57 1 2
species Capnocytophaga granulosa 21 1
species Capnocytophaga haemolytica 5 1 44 1 2
species Capnocytophaga leadbetteri 13 2 4 2 1
species Capnocytophaga ochracea 10 2 10 1 2
species Capnocytophaga sp. ChDC OS43 1
species Capnocytophaga sp. FDAARGOS_737 1
species Capnocytophaga sp. H2931 1
species Capnocytophaga sp. H4358 1
species Capnocytophaga sp. oral taxon 323 3 2
species Capnocytophaga sp. oral taxon 329 1
species Capnocytophaga sp. oral taxon 864 3 3 1
species Capnocytophaga sp. oral taxon 878 32 5 1
species Capnocytophaga sp. oral taxon 902 3 1
species Capnocytophaga sputigena 2 134 1 1 2
species Capnocytophaga stomatis 130 2 2
species Caproicibacter fermentans 2 3
species Caproicibacterium amylolyticum 2 3 1
species Caproicibacterium lactatifermentans 1 1 3
species Caproicibacterium sp. BJN0003 1 3
species Caproiciproducens faecalis 1
species Caproiciproducens galactitolivorans 268 1 1 9
species Caproiciproducens sp. 1
species Caproiciproducens sp. NJN-50 264 6 3
species Caproiciproducens sp. NSJ-41 1
species Carboxydocella ferrireducens 2678 2 1 2
species Carboxydocella manganica 29 2
species Carboxydocella thermautotrophica 200 1 1 2
species Carboxydothermus ferrireducens 37
species Carboxydothermus hydrogenoformans 25 4 2
species Carboxydothermus pertinax 1
species Carboxydothermus siderophilus 2
species Carboxylicivirga linearis 349
species Cardinium endosymbiont of Encarsia pergandiella 1
species Cardiobacterium hominis 56 8 111 1 1
species Cardiobacterium sp. Marseille-Q4385 2
species Cardiobacterium valvarum 29 8 2
species Carnimonas nigrificans 37
species Carnobacterium divergens 18 6 55 1 2
species Carnobacterium funditum 31
species Carnobacterium gallinarum 2
species Carnobacterium inhibens 93 39 3 2 2
species Carnobacterium maltaromaticum 4 2 137 2 1 2
species Carnobacterium mobile 2 2
species Carnobacterium sp. 17-4 46 5 2
species Carnobacterium sp. CP1 15 3 1
species Carnobacterium sp. CS13 2
species Carnobacterium sp. D5 1
species Carnobacterium sp. N15.MGS-207 3
species Carnobacterium viridans 3 2
species Carteria cerasiformis 2
species Casaltella massiliensis 1021 2 5
species Casimicrobium huifangae 43 2
species Castellaniella defragrans 61 1 1
species Catalinimonas niigatensis 1
species Catellatospora chokoriensis 1
species Catellatospora sp. IY07-71 2
species Catellatospora yuxiensis 3
species Catellicoccus marimammalium 1
species Catenibacillus scindens 1 4 1
species Catenibacterium faecis 1
species Catenibacterium mitsuokai 913 420 63 5 7 2 2 1 2 2 3 1
species Catenibacterium sp. co_0103 7 1 3
species Catenisphaera adipataccumulans 127 2
species Catenovulum agarivorans 6
species Catenovulum sediminis 2
species Catenulispora acidiphila 24 5 2
species Catenulispora subtropica 2
species Catenulispora yoronensis 1
species Catenuloplanes japonicus 1
species Catonella morbi 3662 1481 1 3 1 6 4
species Caudovirales sp. 5
species Caudovirales sp. ct0YK8 1
species Caudovirales sp. ct2A51 1
species Caudovirales sp. ctqPn17 1
species Caudovirales sp. ctt3K6 1
species Caulerpa serrulata 1
species Caulifigura coniformis 10
species Caulobacter flavus 4 2
species Caulobacter henricii 2 4 6 1 1
species Caulobacter mirabilis 1 1 23 2 1
species Caulobacter profundus 3
species Caulobacter rhizosphaerae 8 1
species Caulobacter segnis 1 7 2 2
species Caulobacter soli 15
species Caulobacter sp. FWC26 17 1 1
species Caulobacter sp. K31 14 2
species Caulobacter sp. Z-0024 12
species Caulobacter vibrioides 8 61 1
species Cavenderia fasciculata 1 1 1
species CCM 7287 1
species Cecembia lonarensis 18
species Cedecea davisae 4
species Cedecea lapagei 26 1
species Cedecea neteri 190 1 1
species Celeribacter baekdonensis 3
species Celeribacter ethanolicus 24 3 1
species Celeribacter indicus 22 1
species Celeribacter marinus 1 1 1
species Celerinatantimonas diazotrophica 11 2
species Celerinatantimonas yamalensis 1
species Cellulomonas bogoriensis 9
species Cellulomonas carbonis 1
species Cellulomonas denverensis 5 1
species Cellulomonas dongxiuzhuiae 1
species Cellulomonas fengjieae 1
species Cellulomonas fimi 3 4
species Cellulomonas flavigena 2 31 9 1
species Cellulomonas gelida 1
species Cellulomonas gilvus 61 12
species Cellulomonas iranensis 1
species Cellulomonas palmilytica 1
species Cellulomonas persica 67
species Cellulomonas phragmiteti 4
species Cellulomonas shaoxiangyii 5 1 2
species Cellulomonas sp. C5510 1 2
species Cellulomonas sp. H30R-01 10
species Cellulomonas sp. JZ18 8 1
species Cellulomonas sp. PSBB021 6 1
species Cellulomonas sp. Y8 10 2
species Cellulomonas taurus 32 1
species Cellulomonas uda 1
species Cellulomonas wangleii 1
species Cellulomonas xylanilytica 5
species Cellulophaga algicola 3 2
species Cellulophaga baltica 1 2 4 1
species Cellulophaga lytica 4 1 1
species Cellulophaga omnivescoria 1
species Cellulophaga sp. HaHaR_3_176 2
species Cellulophaga sp. L1A9 1 1
species Cellulophaga tyrosinoxydans 3
species Cellulosibacter alkalithermophilus 253
species Cellulosilyticum lentocellum 692 7 172 1 5 4 2
species Cellulosilyticum ruminicola 684 3 1 1
species Cellulosilyticum sp. WCF-2 233 6 3
species Cellulosimicrobium cellulans 5 1
species Cellulosimicrobium funkei 1
species Cellulosimicrobium protaetiae 1 1 1
species Cellulosimicrobium sp. TH-20 1
species Cellvibrio fulvus 7 8
species Cellvibrio gandavensis 9 17
species Cellvibrio japonicus 2 4 3 1
species Cellvibrio ostraviensis 25
species Cellvibrio sp. KY-GH-1 4 1
species Cellvibrio sp. KY-YJ-3 1
species Cellvibrio sp. PSBB006 9 1 1
species Cellvibrio sp. PSBB023 4 1
species Centipeda periodontii 4
species Cerasicoccus arenae 695 26 3 1
species Cerasicoccus frondis 172 2
species Cerasicoccus maritimus 2
species Cercospora beticola 8
species Cereibacter changlensis 7
species Cereibacter ovatus 5
species Cereibacter sphaeroides 172 1 2 1 1
species Cesiribacter andamanensis 26
species Cesiribacter roseus 26
species Cetobacterium ceti 268 11 1
species Cetobacterium somerae 29 49 2
species Chaetoceros gelidus 1
species Chaetomium globosum 4
species Chamaesiphon minutus 5 3
species Changchengzhania lutea 2
species Changpingibacter yushuensis 75 2
species Chania multitudinisentens 24 20 3 2
species Chattonella marina 1 1
species Chelativorans composti 15 1
species Chelativorans sp. BNC1 22 1
species Chelatococcus daeguensis 15 21
species Chelatococcus sp. CO-6 35 2
species Chelonobacter oris 130 2 1
species Chenggangzhangella methanolivorans 2
species Chiayiivirga flava 2
species Chishuiella changwenlii 6
species Chitinibacter fontanus 1
species Chitinilyticum aquatile 2
species Chitinimonas arctica 57
species Chitinimonas koreensis 2 2
species Chitinimonas taiwanensis 1
species Chitiniphilus purpureus 1 2
species Chitinispirillum alkaliphilum 19 1
species Chitinivibrio alkaliphilus 2
species Chitinivorax tropicus 20
species Chitinolyticbacter meiyuanensis 1 21 1 1
species Chitinophaga agri 145 1
species Chitinophaga alhagiae 45
species Chitinophaga arvensicola 1 2
species Chitinophaga caeni 32 4 1
species Chitinophaga eiseniae 3
species Chitinophaga filiformis 2
species Chitinophaga ginsengihumi 1
species Chitinophaga horti 2
species Chitinophaga niabensis 14
species Chitinophaga oryzae 180 3
species Chitinophaga pendula 1
species Chitinophaga pinensis 1 225 1 5 2
species Chitinophaga silvisoli 3
species Chitinophaga skermanii 4
species Chitinophaga soli 126
species Chitinophaga sp. HK235 2
species Chitinophaga sp. MD30 77 3
species Chitinophaga sp. XS-30 162 2
species Chitinophaga terrae (ex An et al. 2007) 1
species Chitinophaga terrae (ex Kim and Jung 2007) 2
species Chlamydia abortus 1
species Chlamydia caviae 1
species Chlamydia felis 1 1
species Chlamydia pecorum 1
species Chlamydia serpentis 1
species Chlamydia trachomatis 1
species chlamydia-associated clinical sample 494-S 3
species chlamydia-associated clinical sample 577-S 19
species chlamydia-associated clinical sample 586-S 14
species Chlamydiifrater volucris 1
species Chlamydomonas reinhardtii 2
species Chloracidobacterium aggregatum 1
species Chloracidobacterium thermophilum 18 37 3
species Chloracidobacterium validum 2
species Chlorobaculum limnaeum 129 1 122 1 1 1
species Chlorobaculum parvum 119 1
species Chlorobaculum sp. MV4-01-44b_2 4
species Chlorobaculum tepidum 72 1 1
species Chlorobaculum thiosulfatiphilum 55
species Chlorobium chlorochromatii 1 5
species Chlorobium limicola 68 1 1
species Chlorobium phaeobacteroides 7 51 1 1
species Chlorobium phaeovibrioides 20 1
species Chloroflexus aggregans 1 5 2 2
species Chloroflexus aurantiacus 21 2 2
species Chlorogloeopsis fritschii 31
species Chloroherpeton thalassium 24 30 17 2
species Chloroparvula japonica 1
species Chloroparvula pacifica 1
species Chloropicon laureae 1
species Chloropicon primus 1
species Chloropicon roscoffensis 1
species Chlorosarcinopsis eremi 1
species Chondrocystis sp. NIES-4102 1 2
species Chondromyces apiculatus 2
species Chondromyces crocatus 70 2
species Chondromyces lanuginosus 1 1
species Chondromyces pediculatus 202
species Chondrus crispus 1
species Chopinvirus KSY1 1
species Chordicoccus furentiruminis 2 3
species Christensenella hongkongensis 286 87 2 4 9 2 7 1 1 1
species Christensenella massiliensis 270 1 1 4 5 3 1
species Christensenella minuta 262 126 271 3 18 5 1 2 3 1
species Christensenella sp. 1 2
species Christensenella sp. MSJ-20 1
species Christensenella sp. UBA1685 1
species Christensenella sp. UBA4263 1
species Christensenella sp. UBA5394 2
species Christensenella timonensis 19 1
species Christensenellaceae bacterium 1 4
species Christensenellaceae bacterium Phil1 1
species Christiangramia flava 21 1 2
species Christiangramia forsetii 24 1 1
species Christiangramia fulva 20 1 1 1
species Christiangramia oceani 2
species Christiangramia salexigens 1
species Chromatiaceae bacterium 2141T.STBD.0c.01a 72 1
species Chromatium okenii 1 11
species Chromatium weissei 823 1
species Chromatocurvus halotolerans 1
species Chromobacterium haemolyticum 1
species Chromobacterium paludis 31 1
species Chromobacterium phragmitis 1 1
species Chromobacterium piscinae 38
species Chromobacterium rhizoryzae 1
species Chromobacterium sp. ATCC 53434 31
species Chromobacterium sp. IIBBL 290-4 1 1
species Chromobacterium subtsugae 388 16
species Chromobacterium vaccinii 58 1
species Chromobacterium violaceum 44 8 6
species Chromohalobacter japonicus 1
species Chromohalobacter salexigens 9 1 1
species Chroococcidiopsis sp. CCNUC1 1 1
species Chroococcidiopsis thermalis 2 1
species Chroococcus minutus 2034 2 2
species Chroothece richteriana 1
species Chryseobacterium aquaticum 1
species Chryseobacterium arthrosphaerae 20 2
species Chryseobacterium artocarpi 1
species Chryseobacterium aureum 10 3
species Chryseobacterium balustinum 2 2
species Chryseobacterium bernardetii 25 1
species Chryseobacterium camelliae 48 2 1
species Chryseobacterium capnotolerans 1
species Chryseobacterium carnipullorum 58 1 2
species Chryseobacterium cucumeris 1
species Chryseobacterium daecheongense 1
species Chryseobacterium daeguense 1
species Chryseobacterium formosense 5
species Chryseobacterium gallinarum 148 4 1
species Chryseobacterium gambrini 1 1
species Chryseobacterium glaciei 1
species Chryseobacterium gleum 2 85 4 1
species Chryseobacterium hagamense 2
species Chryseobacterium hispalense 2
species Chryseobacterium indologenes 2 210 1 3 2
species Chryseobacterium indoltheticum 34 2
species Chryseobacterium isbiliense 4
species Chryseobacterium joostei 2 16
species Chryseobacterium kwangjuense 1
species Chryseobacterium lactis 2 2 2
species Chryseobacterium nakagawai 3
species Chryseobacterium oranimense 3
species Chryseobacterium oryzae 1 2
species Chryseobacterium piperi 2 2 1
species Chryseobacterium salivictor 6 3 1
species Chryseobacterium shandongense 49 2 1
species Chryseobacterium shigense 2
species Chryseobacterium soldanellicola 1
species Chryseobacterium soli 78
species Chryseobacterium sp. 10 1 1
species Chryseobacterium sp. 3008163 26 2 1
species Chryseobacterium sp. 6424 37 1 2
species Chryseobacterium sp. F5649 1
species Chryseobacterium sp. G0162 1
species Chryseobacterium sp. G0186 5 1
species Chryseobacterium sp. G0201 4 1
species Chryseobacterium sp. H-6-1 1
species Chryseobacterium sp. IHB B 17019 22 1 1
species Chryseobacterium sp. JAH 1
species Chryseobacterium sp. JV274 9
species Chryseobacterium sp. NEB161 12
species Chryseobacterium sp. PCH239 1
species Chryseobacterium sp. POL2 2
species Chryseobacterium sp. SNU WT5 3 2
species Chryseobacterium sp. StRB126 5 3
species Chryseobacterium sp. T16E-39 64 3 1
species Chryseobacterium sp. TP-Snow-C25 1
species Chryseobacterium sp. Y16C 1
species Chryseobacterium suipulveris 1
species Chryseobacterium taichungense 38 1 6
species Chryseobacterium taihuense 26
species Chryseobacterium taklimakanense 130 1 2
species Chryseoglobus sp. 28M-23 1
species Chryseolinea serpens 35
species Chryseolinea soli 153 5 2
species Chryseomicrobium excrementi 1
species Chrysochromulina parva 1
species Chthoniobacter flavus 44 9
species Chthonomonas calidirosea 168 13 3
species Ciceribacter thiooxidans 1
species CIP 109333 4 1
species Citreitalea marina 6
species Citricoccus alkalitolerans 2
species Citricoccus muralis 9
species Citricoccus sp. SGAir0253 1
species Citricoccus yambaruensis 1
species Citrifermentans bemidjiense 2 68 2
species Citrifermentans bremense 116 1
species Citrobacter amalonaticus 2 56 1 1
species Citrobacter arsenatis 25
species Citrobacter braakii 6 32 1 1 1
species Citrobacter europaeus 1 1
species Citrobacter farmeri 37 2 1 2 1
species Citrobacter freundii 471 16 217 12 11 2 16 9 1 3 1
species Citrobacter freundii complex sp. CFNIH2 23
species Citrobacter freundii complex sp. CFNIH3 4
species Citrobacter freundii complex sp. CFNIH4 2 1
species Citrobacter freundii complex sp. CFNIH9 10
species Citrobacter koseri 60 9 7 1
species Citrobacter pasteurii 26 1 1
species Citrobacter phage Chris1 1
species Citrobacter portucalensis 35 4 1 2 1
species Citrobacter rodentium 58 2
species Citrobacter sedlakii 1
species Citrobacter sp. 1
species Citrobacter sp. 172116965 12
species Citrobacter sp. BW4 39
species Citrobacter sp. CF971 8
species Citrobacter sp. CFNIH10 14
species Citrobacter sp. CRE-46 13
species Citrobacter sp. Fec2 2
species Citrobacter sp. HD4.9 13
species Citrobacter sp. KTE32 1
species Citrobacter sp. LUTT5 7
species Citrobacter sp. MY-5 2
species Citrobacter sp. R56 1
species Citrobacter sp. RHB25-C09 51 1
species Citrobacter sp. RHB35-C17 14
species Citrobacter sp. RHB35-C21 6
species Citrobacter sp. RHB36-C18 7
species Citrobacter sp. RHBSTW-00021 1
species Citrobacter sp. RHBSTW-00053 5
species Citrobacter sp. RHBSTW-00127 4
species Citrobacter sp. RHBSTW-00229 3 1
species Citrobacter sp. RHBSTW-00424 1
species Citrobacter sp. RHBSTW-00446 2
species Citrobacter sp. RHBSTW-00524 8
species Citrobacter sp. RHBSTW-00535 1
species Citrobacter sp. RHBSTW-00570 6
species Citrobacter sp. RHBSTW-00599 11
species Citrobacter sp. RHBSTW-00678 1
species Citrobacter sp. RHBSTW-00696 4
species Citrobacter sp. RHBSTW-00881 12
species Citrobacter sp. RHBSTW-00887 9
species Citrobacter sp. RHBSTW-00903 2
species Citrobacter sp. RHBSTW-00944 3
species Citrobacter sp. RHBSTW-00976 4
species Citrobacter sp. RHBSTW-00986 7
species Citrobacter sp. RHBSTW-01013 7
species Citrobacter sp. RHBSTW-01044 3
species Citrobacter sp. S39 3
species Citrobacter sp. TBCP-5362 1
species Citrobacter sp. TSA-1 16
species Citrobacter sp. wls712 1
species Citrobacter sp. wls757 1
species Citrobacter sp. Y3 10
species Citrobacter tructae 59 1
species Citrobacter werkmanii 427 39 1 1 1 2 2
species Citrobacter youngae 24 4 1 1
species Citromicrobium bathyomarinum 1
species Citromicrobium sp. JL477 17 3
species Clavibacter capsici 2 1
species Clavibacter michiganensis 2 1 108 4 1
species Clavibacter sepedonicus 1
species Cloacibacillus evryensis 116 86 1 1 1 2 1
species Cloacibacillus porcorum 95 34 237 1 1 1 1 3 1
species Cloacibacterium caeni 1 2
species Cloacibacterium haliotis 2
species Cloacibacterium normanense 2 65 1 2 1
species Clostridia bacterium 1 4
species Clostridia bacterium UC5.1-1D1 2 8 2
species Clostridia bacterium UC5.1-1D10 4
species Clostridia bacterium UC5.1-1D4 1
species Clostridia bacterium UC5.1-1E11 1
species Clostridia bacterium UC5.1-1F7 4
species Clostridia bacterium UC5.1-1F8 3
species Clostridia bacterium UC5.1-2D9 2
species Clostridia bacterium UC5.1-2F7 3 4
species Clostridia bacterium UC5.1-2G4 3 1
species Clostridia bacterium UC5.1-2H11 6 4
species Clostridiaceae bacterium 1 1 4
species Clostridiaceae bacterium 14S0207 233 1 1
species Clostridiaceae bacterium AF02-42 4
species Clostridiaceae bacterium AF18-31LB 4
species Clostridiaceae bacterium AF29-16BH 4
species Clostridiaceae bacterium AF31-3BH 4
species Clostridiaceae bacterium AF42-6 3 7 4
species Clostridiaceae bacterium AM27-36LB 4
species Clostridiaceae bacterium DJF_B063 1
species Clostridiaceae bacterium DJF_VR07 1
species Clostridiaceae bacterium K10 1
species Clostridiaceae bacterium Marseille-Q4143 1 4
species Clostridiaceae bacterium Marseille-Q4145 4
species Clostridiaceae bacterium Marseille-Q4149 1 3
species Clostridiaceae bacterium MS3 14 4
species Clostridiaceae bacterium OF09-1 3 7 4
species Clostridiaceae bacterium OM08-6BH 4
species Clostridiaceae bacterium P320 1
species Clostridiaceae bacterium T2-RPP 4
species Clostridiaceae bacterium TF01-6 3 8 4
species Clostridiales bacterium 272 5 18 4
species Clostridiales bacterium 1_7_47FAA 13
species Clostridiales bacterium 1001713B170214_170313_E3 2
species Clostridiales bacterium 24-4c 1 1
species Clostridiales bacterium 40-4c 8
species Clostridiales bacterium AF36-10 3 6 4
species Clostridiales bacterium AHG0011 1
species Clostridiales bacterium AM23-16LB 4
species Clostridiales bacterium Art 12/1 1
species Clostridiales bacterium CCNA10 273 1 8 5
species Clostridiales bacterium Choco116 255 1 1
species Clostridiales bacterium CIEAF 012 1
species Clostridiales bacterium DJF_VP48 1
species Clostridiales bacterium DTU089 3 5
species Clostridiales bacterium FE2010 1
species Clostridiales bacterium KLE1615 5 8 4
species Clostridiales bacterium L2-14 2
species Clostridiales bacterium LMAG:78 4
species Clostridiales bacterium NK3B98 3
species Clostridiales bacterium oral clone MCE3_9 1
species Clostridiales bacterium UBA1381 1
species Clostridiales bacterium UBA1701 1
species Clostridiales bacterium UBA1707 1 4
species Clostridiales bacterium UBA4696 3
species Clostridiales bacterium UBA5446 1
species Clostridiales bacterium UBA5901 3
species Clostridiales bacterium UBA643 1
species Clostridiales bacterium UBA7273 1
species Clostridiales bacterium UBA738 6
species Clostridiales bacterium VE202-01 11 1
species Clostridiales bacterium VE202-03 26 4
species Clostridiales bacterium VE202-06 17
species Clostridiales bacterium VE202-07 4 4
species Clostridiales bacterium VE202-08 4
species Clostridiales bacterium VE202-09 3
species Clostridiales bacterium VE202-13 17 2
species Clostridiales bacterium VE202-14 17
species Clostridiales bacterium VE202-15 12 1
species Clostridiales bacterium VE202-16 15
species Clostridiales bacterium VE202-18 13
species Clostridiales bacterium VE202-21 24 2
species Clostridiales bacterium VE202-26 7
species Clostridiales bacterium VE202-27 18 1
species Clostridiales bacterium VE202-28 13
species Clostridiales bacterium VE202-29 3 4
species Clostridiales Family XIII bacterium 3 3
species Clostridiales genomosp. BVAB1 268 1
species Clostridiisalibacter paucivorans 22
species Clostridioides difficile 30 486 274 39 1 28 25 2 6 6 6 3 2 1
species Clostridium aceticum 161 1 4 2
species Clostridium acetireducens 674 17 2 1
species Clostridium acetobutylicum 208 9 25 2
species Clostridium acidisoli 12 171
species Clostridium aestuarii 632 87
species Clostridium akagii 2393 511 1
species Clostridium algidicarnis 9 43 2
species Clostridium algifaecis 318
species Clostridium aminobutyricum 1
species Clostridium amylolyticum 143 503 1
species Clostridium argentinense 2 208 1 2 2
species Clostridium aurantibutyricum 18 87 1
species Clostridium autoethanogenum 41 1 1 2
species Clostridium baratii 109 2 258 21 30 2
species Clostridium beijerinckii 1 266 1 6 1 3 1
species Clostridium boliviensis 1
species Clostridium bornimense 757 252 1 4 2
species Clostridium botulinum 2 1 269 21 18 3
species Clostridium bovifaecis 205 1 1
species Clostridium bovipellis 17 1
species Clostridium bowmanii 2
species Clostridium butyricum 153 291 267 11 2 29 5 1 3 1
species Clostridium cadaveris 1654 116 2 9 6 3
species Clostridium caliptrosporum 284
species Clostridium carboxidivorans 8 227 1 5 2
species Clostridium carnis 8 5 2
species Clostridium cavendishii 872 108 1
species Clostridium celatum 27 1 8 2 4 1
species Clostridium cellulovorans 386 212 248 2 5 3
species Clostridium chartatabidum 1220 1067 1 3 3 1 1
species Clostridium chauvoei 1 206 2 1 2 2
species Clostridium chromiireducens 148 4
species Clostridium cochlearium 1 58 171 20 5 2
species Clostridium colicanis 5 71
species Clostridium collagenovorans 251 228
species Clostridium cuniculi 5 1 1
species Clostridium cylindrosporum 431 2
species Clostridium diolis 6 3 1 1
species Clostridium disporicum 1 72 2 3
species Clostridium drakei 118 9 15 2
species Clostridium estertheticum 231 1 5 3
species Clostridium facile 4
species Clostridium fallax 433 21 7 2 3
species Clostridium felsineum 3 3
species Clostridium fermenticellae 211 5 2
species Clostridium fessum 8 8 4 1
species Clostridium formicaceticum 1 198 20 21 2
species Clostridium frigidicarnis 97 128
species Clostridium frigoris 4419 429 1 5 2
species Clostridium fungisolvens 1
species Clostridium fusiformis 1
species Clostridium ganghwense 17
species Clostridium gasigenes 267 78 2 1 1 2
species Clostridium gelidum 1 2
species Clostridium grantii 489 169 2
species Clostridium haemolyticum 1 14
species Clostridium homopropionicum 146
species Clostridium hveragerdense 163 1 1
species Clostridium hydrogeniformans 35 70
species Clostridium intestinale 1 1378 259 2 2 3 3
species Clostridium isatidis 133 240 2 5 2
species Clostridium islandicum 2
species Clostridium jeddahitimonense 1 5
species Clostridium kluyveri 78 435 252 1 3 2
species Clostridium kogasense 253
species Clostridium lacusfryxellense 1
species Clostridium lentum 3
species Clostridium liquoris 1
species Clostridium ljungdahlii 4 1 2
species Clostridium longisporum 2
species Clostridium lundense 43 286
species Clostridium magnum 52 55
species Clostridium malenominatum 1711 19 4
species Clostridium manihotivorum 254 6 2
species Clostridium massiliamazoniense 1 1
species Clostridium minihomine 1
species Clostridium moniliforme 1 1
species Clostridium neonatale 239 1 2 1 3
species Clostridium nigeriense 1
species Clostridium nitrophenolicum 822 1
species Clostridium novyi 255 1 6 1 2
species Clostridium oceanicum 113 5
species Clostridium oryzae 402 1
species Clostridium paraputrificum 509 215 5 7 3 4 2 1
species Clostridium paridis 1
species Clostridium pasteurianum 23 257 10 31 3 1
species Clostridium perfringens 541 240 273 31 2 1 31 2 2 3 1
species Clostridium phage CWou-2020b 1
species Clostridium phoceensis 2 4 10 4 1
species Clostridium polyendosporum 139
species Clostridium porci 2 1
species Clostridium putrefaciens 257 461 7 2 1
species Clostridium quinii 196 1
species Clostridium rhizosphaerae 1
species Clostridium ruminantium 1
species Clostridium saccharobutylicum 5 37 259 20 27 4 2
species Clostridium saccharoperbutylacetonicum 24 256 1 6 1 3
species Clostridium sardiniense 52 5 1
species Clostridium sartagoforme 3 1
species Clostridium saudiense 3 18 2 3
species Clostridium scatologenes 140 20 21 2
species Clostridium schirmacherense 113
species Clostridium segne 4 1
species Clostridium senegalense 596
species Clostridium septicum 214 215 2 4 2
species Clostridium sp. 1 3 7 1 1 8 4
species Clostridium sp. 001 2
species Clostridium sp. 1_1_41A1FAA 2 3
species Clostridium sp. 1001270H_150608_G6 1
species Clostridium sp. 1001270J_160509_D11 1 1
species Clostridium sp. 1001271B_150615_H5 2
species Clostridium sp. 1001271st1 H5 2
species Clostridium sp. 1001283B150225_161107_B6 2
species Clostridium sp. 12(A) 1
species Clostridium sp. 14505 4
species Clostridium sp. 16K-1-R1 1
species Clostridium sp. 26_22 1
species Clostridium sp. 27_14 1
species Clostridium sp. 28_12 1
species Clostridium sp. 28_17 2
species Clostridium sp. 29_15 3
species Clostridium sp. 42_12 2
species Clostridium sp. 619 1 1 1 23
species Clostridium sp. 6-22 2
species Clostridium sp. 6-24 2
species Clostridium sp. 7_3_54FAA 1
species Clostridium sp. A9 2
species Clostridium sp. ACB-29 1 2
species Clostridium sp. AF02-29 4 1
species Clostridium sp. AF12-19 4 1
species Clostridium sp. AF12-28 4
species Clostridium sp. AF12-41 4 1
species Clostridium sp. AF15-31 1
species Clostridium sp. AF15-41 1
species Clostridium sp. AF15-49 1
species Clostridium sp. AF15-6B 1
species Clostridium sp. AF16-25 1
species Clostridium sp. AF18-27 3
species Clostridium sp. AF20-17LB 4 1
species Clostridium sp. AF20-7 4 1
species Clostridium sp. AF21-20LB 4 1
species Clostridium sp. AF22-10 4 1
species Clostridium sp. AF23-6LB 1
species Clostridium sp. AF23-8 1 1
species Clostridium sp. AF24-2LB 4
species Clostridium sp. AF27-2AA 4 1
species Clostridium sp. AF27-5AA 4
species Clostridium sp. AF28-12 4 1
species Clostridium sp. AF29-8BH 4 1
species Clostridium sp. AF32-12BH 1 1
species Clostridium sp. AF32-7AC 4
species Clostridium sp. AF34-10BH 4 1
species Clostridium sp. AF34-13 2
species Clostridium sp. AF35-15 4
species Clostridium sp. AF36-18BH 4 1
species Clostridium sp. AF36-4 3 1
species Clostridium sp. AF37-5 3 1
species Clostridium sp. AF37-5AT 4 1
species Clostridium sp. AF37-7 5 4 1
species Clostridium sp. AF43-10 1
species Clostridium sp. AF46-12NS 4 1
species Clostridium sp. AF46-9NS 4
species Clostridium sp. AF50-3 4 1
species Clostridium sp. AM09-51 1
species Clostridium sp. AM16-23 4 1
species Clostridium sp. AM18-55 4 1
species Clostridium sp. AM22-11AC 4 1
species Clostridium sp. AM22-16AC 4 1
species Clostridium sp. AM25-23AC 4 1
species Clostridium sp. AM27-28 4 1
species Clostridium sp. AM27-31LB 2 1 2 1
species Clostridium sp. AM28-20LB 4
species Clostridium sp. AM30-24 4 1
species Clostridium sp. AM32-2 4 1
species Clostridium sp. AM33-3 4 1
species Clostridium sp. AM34-11AC 4 1
species Clostridium sp. AM34-9AC 4 1
species Clostridium sp. AM42-36 1
species Clostridium sp. AM42-4 1
species Clostridium sp. AM43-3BH 4
species Clostridium sp. AM45-5 4 1
species Clostridium sp. AM48-13 4 1
species Clostridium sp. AM49-4BH 2
species Clostridium sp. AM51-4 4 1
species Clostridium sp. AM58-1XD 1
species Clostridium sp. AN-AS6C 1 4
species Clostridium sp. AN-AS6E 2
species Clostridium sp. AP-15 172 4
species Clostridium sp. AT32 1
species Clostridium sp. AT4 2 14 1
species Clostridium sp. ATCC 29733 4
species Clostridium sp. ATCC BAA-442 1 3 4
species Clostridium sp. AUH-JLC140 2
species Clostridium sp. AUH-JLC235 1
species Clostridium sp. AUH-JLC39 2
species Clostridium sp. AWRP 166 4 2
species Clostridium sp. B8 1
species Clostridium sp. BG-C122 2
species Clostridium sp. BG-C124 1 3
species Clostridium sp. BG-C36 2
species Clostridium sp. BIOML-A1 1 1
species Clostridium sp. BJN0001 1 2
species Clostridium sp. BNL1100 242 5 2
species Clostridium sp. BPY5 1 23
species Clostridium sp. BS-5 7
species Clostridium sp. BSD2780061688b_171218_E8 2
species Clostridium sp. BSD2780061688st1 E8 2
species Clostridium sp. BSY12 1
species Clostridium sp. BTY5 1 3
species Clostridium sp. C1 2 1 3
species Clostridium sp. C-1 2
species Clostridium sp. CAG:122 2
species Clostridium sp. CAG:12237_41 2
species Clostridium sp. CAG:127 1
species Clostridium sp. CAG:138 1 3
species Clostridium sp. CAG:167 3
species Clostridium sp. CAG:169 2
species Clostridium sp. CAG:217 2 3
species Clostridium sp. CAG:221 2
species Clostridium sp. CAG:226 1
species Clostridium sp. CAG:230 2
species Clostridium sp. CAG:242 1 2
species Clostridium sp. CAG:245 3
species Clostridium sp. CAG:245_30_32 3
species Clostridium sp. CAG:253 2
species Clostridium sp. CAG:265 3
species Clostridium sp. CAG:269 2
species Clostridium sp. CAG:273 2
species Clostridium sp. CAG:288 3
species Clostridium sp. CAG:302 3
species Clostridium sp. CAG:306 2
species Clostridium sp. CAG:307 1
species Clostridium sp. CAG:307_30_263 1
species Clostridium sp. CAG:343 1
species Clostridium sp. CAG:352 3
species Clostridium sp. CAG:354 2
species Clostridium sp. CAG:354_28_25 1
species Clostridium sp. CAG:356 1
species Clostridium sp. CAG:389 2
species Clostridium sp. CAG:417 1
species Clostridium sp. CAG:43 4
species Clostridium sp. CAG:433 1
species Clostridium sp. CAG:470 2
species Clostridium sp. CAG:492 2
species Clostridium sp. CAG:508 1
species Clostridium sp. CAG:575 1
species Clostridium sp. CAG:58 1 2
species Clostridium sp. CAG:62 3
species Clostridium sp. CAG:62_40_43 3
species Clostridium sp. CAG:7 4
species Clostridium sp. CAG:710 1
species Clostridium sp. CAG:75 2
species Clostridium sp. CAG:81 2 4
species Clostridium sp. CAG:91 4
species Clostridium sp. CCRI-9842 7
species Clostridium sp. CF011 2
species Clostridium sp. Clone-17 1
species Clostridium sp. Clone-24 3
species Clostridium sp. Clone-44 2
species Clostridium sp. Clone-49 1
species Clostridium sp. CM027 2
species Clostridium sp. CM-C81 4
species Clostridium sp. cTPY-17 1 1 10
species Clostridium sp. Culture Jar-13 1 3
species Clostridium sp. Culture Jar-19 1
species Clostridium sp. Culture Jar-44 1
species Clostridium sp. Culture Jar-8 1 8
species Clostridium sp. Culture-1 2
species Clostridium sp. Culture-41 4
species Clostridium sp. D43t1_170807_D5 1 1
species Clostridium sp. D43t1_170807_H7 1
species Clostridium sp. 'deep sea' 2
species Clostridium sp. DFI.5.61 4
species Clostridium sp. DL-VIII 2
species Clostridium sp. EDB2 1 15
species Clostridium sp. enrichment clone Ecwsrb098 1
species Clostridium sp. enrichment culture 1 17
species Clostridium sp. enrichment culture clone 7-14 63
species Clostridium sp. enrichment culture clone 7-25 57
species Clostridium sp. enrichment culture clone a-11 1 2
species Clostridium sp. enrichment culture clone BR3 1
species Clostridium sp. enrichment culture clone c-1 6
species Clostridium sp. enrichment culture clone c-7 2
species Clostridium sp. enrichment culture clone d-1 6
species Clostridium sp. enrichment culture clone VanCtr93 4
species Clostridium sp. enrichment culture clone VanCtr97 1
species Clostridium sp. enrichment culture clone Y234 10
species Clostridium sp. FA2/18 2
species Clostridium sp. FCB45 1
species Clostridium sp. FCB90-3 1
species Clostridium sp. FS41 3 1
species Clostridium sp. GS_0803 1 1
species Clostridium sp. H116 1 2
species Clostridium sp. HGF2 2 1
species Clostridium sp. ID11 2
species Clostridium sp. ID5 1 13
species Clostridium sp. ID6 1 1
species Clostridium sp. IE5 1
species Clostridium sp. J1101437_171009_A5 1
species Clostridium sp. JN-1 183 6 2
species Clostridium sp. JN-9 248 5 2
species Clostridium sp. JPL_22 1 5
species Clostridium sp. K04 3
species Clostridium sp. K12-15-18 2
species Clostridium sp. K13-19 2 1
species Clostridium sp. K4410.MGS-306 2
species Clostridium sp. KLE 1755 1
species Clostridium sp. KNHs214 1
species Clostridium sp. L2-50 1
species Clostridium sp. LMAG:63 3
species Clostridium sp. LQ25 1 2
species Clostridium sp. M62/1 1 1
species Clostridium sp. Marseille-P2415 1 5
species Clostridium sp. Marseille-P2776 1 25
species Clostridium sp. Marseille-P3122 1
species Clostridium sp. Marseille-P3244 1 13
species Clostridium sp. Marseille-P6447 1
species Clostridium sp. Marseille-P7770 4 1
species Clostridium sp. MC_30 2
species Clostridium sp. MCC328 4 1
species Clostridium sp. MCC334 2
species Clostridium sp. MCC344 4 1
species Clostridium sp. MCC345 4 1
species Clostridium sp. MD294 1 2 3
species Clostridium sp. MDA2315 1 1
species Clostridium sp. MF28 3 1
species Clostridium sp. MK12 2
species Clostridium sp. MLG055 5
species Clostridium sp. MLG245 7
species Clostridium sp. MLG480 2 2
species Clostridium sp. MLG856-1 10
species Clostridium sp. MSJ-8 1
species Clostridium sp. NAAn 2
species Clostridium sp. NkU-1 2
species Clostridium sp. NML 04A032 1 5
species Clostridium sp. NSJ-145 1
species Clostridium sp. NSJ-49 1
species Clostridium sp. NT-1 1
species Clostridium sp. NT-2 1
species Clostridium sp. OF03-18AA 4 1
species Clostridium sp. OF09-10 4 1
species Clostridium sp. OF09-36 1
species Clostridium sp. OF13-4 4 1
species Clostridium sp. OM02-18AC 1 1
species Clostridium sp. OM04-12AA 4 1
species Clostridium sp. OM04-7 4
species Clostridium sp. OM05-5BH 4 1
species Clostridium sp. OM05-6BH 2
species Clostridium sp. OM05-9BH 2
species Clostridium sp. OM08-29 1 1
species Clostridium sp. P301 1
species Clostridium sp. P303 1 1
species Clostridium sp. Pao32 1
species Clostridium sp. PPf35E6 1
species Clostridium sp. R96 1
species Clostridium sp. SL-2013-71 3
species Clostridium sp. SR1 1
species Clostridium sp. SS2/1 4 19 4
species Clostridium sp. strain P2 2
species Clostridium sp. SW003 1
species Clostridium sp. SY8519 1 270 8 6 3
species Clostridium sp. T28_5 2
species Clostridium sp. TB5 1
species Clostridium sp. TDO 2
species Clostridium sp. TF01-11 1
species Clostridium sp. TF06-15AC 4
species Clostridium sp. TF08-15 4 1
species Clostridium sp. TF11-13AC 4 1
species Clostridium sp. TM06-18 4 1
species Clostridium sp. TM-40 2
species Clostridium sp. VE202-10 4
species Clostridium sp. W14A 1
species Clostridium sp. YIT 12069 1 4
species Clostridium sp. YIT 12070 4
species Clostridium sporogenes 272 20 29 4 2 1
species Clostridium subterminale 25 1
species Clostridium sulfidigenes 449
species Clostridium swellfunianum 23 1
species Clostridium taeniosporum 2593 1 232 1 2 6 2
species Clostridium tagluense 7 1 2
species Clostridium tarantellae 21
species Clostridium tepidiprofundi 1116 71 4
species Clostridium tertium 3 4 5 1
species Clostridium tetani 1 44 233 1 11 2 1
species Clostridium tetanomorphum 107 4
species Clostridium thermarum 2 1
species Clostridium thermobutyricum 7 507
species Clostridium thermopalmarium 488
species Clostridium thermosuccinogenes 3969 29 248 4 4 3 6 3
species Clostridium thiosulfatireducens 10 47
species Clostridium tunisiense 82
species Clostridium tyrobutyricum 34 234 10 20 2 1
species Clostridium uliginosum 17 1
species Clostridium vincentii 3009 86 1 1
species Clostridium vulturis 1
species Cnuella takakiae 3
species Cnuibacter physcomitrellae 1 2
species Cobetia crustatorum 1
species Cobetia marina 4 1
species Cobetia sp. L2A1 6
species Coccomyxa sp. Obi 1
species Coccomyxa subellipsoidea 1
species Cocleimonas flava 2
species Coenonia anatina 10
species Coetzeevirus ATCC8014 5
species Coetzeevirus cIP1 5
species Cognaticolwellia beringensis 1
species Cognatishimia activa 1
species Cohaesibacter haloalkalitolerans 1
species Cohaesibacter sp. ES.047 50 1
species Cohcovirus hiberniae 1 2
species Cohnella abietis 116 2 2
species Cohnella boryungensis 4
species Cohnella candidum 165 1 2
species Cohnella cellulosilytica 18
species Cohnella cholangitidis 86 1 2
species Cohnella damuensis 3
species Cohnella herbarum 93 2
species Cohnella hongkongensis 9 1
species Cohnella laeviribosi 508 2 2
species Cohnella phaseoli 14 3
species Cohnella soli 1172 2 2
species Cohnella sp. 18JY8-7 3
species Cohnella sp. GbtcB17 1
species Cohnella sp. LGH 2
species Cohnella terrae 8
species Cohnella thailandensis 2
species Cohnella thermotolerans 31
species Cohnella xylanilytica 6
species Coleofasciculus chthonoplastes 1
species Colibacter massiliensis 1
species Colidextribacter massiliensis 1 12 9
species Colidextribacter sp. 210702-DFI.3.9 4 1
species Colletotrichum higginsianum 1 1
species Colletotrichum karsti 1
species Colletotrichum orchidophilum 1
species Colletotrichum scovillei 1
species Collimonas arenae 22 101 2
species Collimonas fungivorans 11 75 4 1
species Collimonas pratensis 22 92 1
species Collinsella acetigenes 1
species Collinsella aerofaciens 3301 1178 526 276 32 26 18 31 4 7 6 2 3 3 1 1
species Collinsella bouchesdurhonensis 2 1
species Collinsella intestinalis 2149 5 81 1 1 2 1 2 6
species Collinsella phocaeensis 1 1
species Collinsella provencensis 1
species Collinsella sp. 3
species Collinsella sp. 4_8_47FAA 15
species Collinsella sp. 60_9 3
species Collinsella sp. AK_207A 1
species Collinsella sp. AM34-10 1
species Collinsella sp. AM36-4AA 1
species Collinsella sp. CAG:289 1
species Collinsella sp. OM04-5 1
species Collinsella sp. TF05-9AC 3 1
species Collinsella sp. TF08-11AT 1
species Collinsella sp. zg1085 2
species Collinsella stercoris 154 2 1 3 1 1 2
species Collinsella tanakaei 774 304 46 6 5 5 2 3
species Colwellia aquaemaris 3
species Colwellia demingiae 37
species Colwellia hornerae 8 1
species Colwellia psychrerythraea 4 4 2
species Colwellia rossensis 2
species Colwellia sp. 20A7 2
species Colwellia sp. Arc7-D 1
species Colwellia sp. M166 1
species Colwellia sp. MT41 1 2
species Colwellia sp. PAMC 21821 3
species Comamonas antarctica 12
species Comamonas aquatica 6 1 41 1
species Comamonas badia 9
species Comamonas composti 14
species Comamonas denitrificans 4
species Comamonas flocculans 51
species Comamonas fluminis 1
species Comamonas guangdongensis 12
species Comamonas jiangduensis 14
species Comamonas kerstersii 302 112 1 1
species Comamonas koreensis 3 41
species Comamonas odontotermitis 13 1
species Comamonas piscis 68
species Comamonas serinivorans 29 1
species Comamonas sp. HM_AF10 1
species Comamonas sp. j41 4
species Comamonas sp. PR12 1
species Comamonas sp. RV_A09_23b 1
species Comamonas terrae 5
species Comamonas terrigena 7 2 77 2 1
species Comamonas testosteroni 10 1 172 1 2
species Comamonas thiooxydans 76
species Commensalibacter intestini 3
species Commensalibacter melissae 1
species Companilactobacillus alimentarius 1 16 13 1 2
species Companilactobacillus allii 3 9 8 2
species Companilactobacillus crustorum 10 1 1 1
species Companilactobacillus farciminis 6 15 1 2
species Companilactobacillus furfuricola 1
species Companilactobacillus futsaii 6
species Companilactobacillus ginsenosidimutans 4 1 2
species Companilactobacillus heilongjiangensis 1 2 2
species Companilactobacillus nantensis 2 64
species Companilactobacillus nodensis 10 97
species Companilactobacillus pabuli 2
species Companilactobacillus paralimentarius 1 78 7 1
species Companilactobacillus tucceti 448 41
species Companilactobacillus versmoldensis 11
species Companilactobacillus zhachilii 2 2 2
species Conchiformibius kuhniae 12
species Conchiformibius steedae 1 3 6 1
species Conexibacter sp. DBS9H8 2
species Conexibacter sp. S30A1 1
species Conexibacter woesei 1 2 56 3 1
species Congregibacter litoralis 13
species Coniophora puteana 1 1 1
species Constantimarinum furrinae 1
species Constrictibacter antarcticus 2 1
species Coprinopsis cinerea 1
species Coprobacillaceae bacterium 1
species Coprobacillus cateniformis 3985 815 3 4 5 3 1 7 6 1
species Coprobacillus sp. 4
species Coprobacillus sp. 3_3_56FAA 5
species Coprobacillus sp. 8_1_38FAA 4
species Coprobacillus sp. 8_2_54BFAA 3
species Coprobacillus sp. AF02-13 2 4
species Coprobacillus sp. AF09-1A 1
species Coprobacillus sp. AF13-15 4
species Coprobacillus sp. AF13-25 4
species Coprobacillus sp. AF13-4LB 4
species Coprobacillus sp. AF15-30 4
species Coprobacillus sp. AF16-47 1 4
species Coprobacillus sp. AF17-11AC 4
species Coprobacillus sp. AF17-17AC 4
species Coprobacillus sp. AF18-15LB 4
species Coprobacillus sp. AF18-40 4
species Coprobacillus sp. AF19-3 4
species Coprobacillus sp. AF21-8LB 4
species Coprobacillus sp. AF24-1LB 1 4
species Coprobacillus sp. AF27-24BH 4
species Coprobacillus sp. AF29-3BH 4
species Coprobacillus sp. AF31-1BH 4
species Coprobacillus sp. AF34-1BH 4
species Coprobacillus sp. AF35-8 4
species Coprobacillus sp. AF36-10BH 1 4
species Coprobacillus sp. AF37-2 4
species Coprobacillus sp. AM09-26 4
species Coprobacillus sp. AM17-34 4
species Coprobacillus sp. AM18-4LB-d2 4
species Coprobacillus sp. AM23-2 1 4
species Coprobacillus sp. AM23-9LB 4
species Coprobacillus sp. AM26-5AC 4
species Coprobacillus sp. AM28-15LB 2 4
species Coprobacillus sp. AM29-13 4
species Coprobacillus sp. AM32-11LB 2 4 1
species Coprobacillus sp. AM37-9BH 4
species Coprobacillus sp. AM42-12AC 4
species Coprobacillus sp. BIOML-A1 4
species Coprobacillus sp. CAG:235 4
species Coprobacillus sp. CAG:235_29_27 4
species Coprobacillus sp. D6 2 149 2
species Coprobacillus sp. D7 3
species Coprobacillus sp. K06 1
species Coprobacillus sp. OF02-11LB 4
species Coprobacillus sp. OF03-2AA 4
species Coprobacillus sp. OM08-19 4
species Coprobacillus sp. TF10-10 4
species Coprobacillus sp. TM10-10 4
species Coprobacter fastidiosus 788 253 7 3 8 8 3 2 3
species Coprobacter secundus 181 1 5 1 4 3
species Coprobacter sp. 2
species Coprococcus catus 3633 1444 1 276 20 28 28 21 5 1 7 4 4 1 1
species Coprococcus comes 1504 2 20 28 17 9 2 4 3 1
species Coprococcus eutactus 3318 1342 8 3 14 9 8 1 1 1 4 3 3 2 1
species Coprococcus hominis (ex Arizal et al. 2022) 1
species Coprococcus phoceensis 1
species Coprococcus sp. 3
species Coprococcus sp. AF16-22 5 3 1
species Coprococcus sp. AF16-5 3 1
species Coprococcus sp. AF18-48 1
species Coprococcus sp. AF19-8AC 3 1
species Coprococcus sp. AF21-14LB 2 1 1
species Coprococcus sp. AF27-8 1
species Coprococcus sp. AF38-1 3 1
species Coprococcus sp. AM14-16 3
species Coprococcus sp. AM27-12LB 1
species Coprococcus sp. ART55/1 274 8 15 18 3 1
species Coprococcus sp. B2-R-112 4
species Coprococcus sp. BIOML-A1 3
species Coprococcus sp. BIOML-A2 3
species Coprococcus sp. CAG:131 3
species Coprococcus sp. CAG:131_42_139 3
species Coprococcus sp. DFI.6.81 4
species Coprococcus sp. DJF_B005 18
species Coprococcus sp. DJF_CR49 2 9
species Coprococcus sp. HPP0048 4
species Coprococcus sp. HPP0074 4 3
species Coprococcus sp. OM04-5BH 1 1
species Coprococcus sp. OM06-25 3 1
species Coprococcus sp. OM06-34AC 3
species Coprococcus sp. TF11-13 3 1
species Coprothermobacter platensis 79 40
species Coprothermobacter proteolyticus 54 4 2
species Coraliomargarita akajimensis 1414 123 13 1 1
species Coraliomargarita sp. CAG:312 1
species Corallibacter vietnamensis 1
species Corallococcus coralloides 149 4 1
species Corallococcus exiguus 2
species Corallococcus macrosporus 48 1 1
species Cordyceps militaris 2 1
species Coriobacteriaceae bacterium 1 1 3
species Coriobacteriaceae bacterium BV3Ac1 1
species Coriobacteriaceae bacterium CHKCI002 1
species Coriobacteriia bacterium 2
species Coriobacterium glomerans 272 44 230 4 3 2
species Corticibacter populi 5
species Corynebacteriaceae bacterium 'ARUP UnID 227' 168
species Corynebacterium accolens 45 1 4
species Corynebacterium acetoacidophilum 39
species Corynebacterium afermentans 17
species Corynebacterium ammoniagenes 37 121 4
species Corynebacterium amycolatum 264 1 8 2
species Corynebacterium anserum 1
species Corynebacterium appendicis 107 1
species Corynebacterium aquatimens 5 2
species Corynebacterium aquilae 26 117 1 1
species Corynebacterium argentoratense 63 31 83 1
species Corynebacterium atypicum 121 14 155 1
species Corynebacterium aurimucosum 417 15 206 1
species Corynebacterium auris 9
species Corynebacterium bovis 11 1
species Corynebacterium callunae 3 83
species Corynebacterium camporealensis 13 167 1
species Corynebacterium canis 190 2 56
species Corynebacterium capitovis 6
species Corynebacterium casei 33 120
species Corynebacterium caspium 63
species Corynebacterium choanae 1 1
species Corynebacterium ciconiae 2
species Corynebacterium comes 102
species Corynebacterium confusum 23 62 5
species Corynebacterium coyleae 57 13 3
species Corynebacterium crudilactis 61 2
species Corynebacterium cystitidis 35 65 111 2
species Corynebacterium dentalis 1
species Corynebacterium deserti 88 1
species Corynebacterium diphtheriae 7 4 66 223 3 2
species Corynebacterium doosanense 20 121
species Corynebacterium durum 309 216 123 13 1 1 1
species Corynebacterium efficiens 9 130 1
species Corynebacterium endometrii 141 1
species Corynebacterium epidermidicanis 72 95
species Corynebacterium falsenii 31 37 161 1 1 1
species Corynebacterium fastidiosum 1
species Corynebacterium felinum 2 11
species Corynebacterium flavescens 85 148
species Corynebacterium frankenforstense 10 14 148 1
species Corynebacterium freiburgense 9 101 1
species Corynebacterium freneyi 23 1 2 2
species Corynebacterium genitalium 93 1 6 1
species Corynebacterium glaucum 14 37 147 1
species Corynebacterium glucuronolyticum 162 28 27 9 2
species Corynebacterium glutamicum 81
species Corynebacterium glyciniphilum 77 1
species Corynebacterium halotolerans 124 1
species Corynebacterium hansenii 76
species Corynebacterium heidelbergense 1 2
species Corynebacterium humireducens 95 139 1
species Corynebacterium ihumii 1
species Corynebacterium imitans 42 180 1
species Corynebacterium jeikeium 241 112 1 241 2
species Corynebacterium kalinowskii 134 2
species Corynebacterium kroppenstedtii 25 28 87 1
species Corynebacterium kutscheri 163 1 35 1
species Corynebacterium lactis 118 1 1
species Corynebacterium liangguodongii 128
species Corynebacterium lipophiloflavum 37 5
species Corynebacterium lizhenjunii 1
species Corynebacterium lubricantis 39
species Corynebacterium lujinxingii 1
species Corynebacterium macginleyi 11 1
species Corynebacterium marinum 35 51 111 1
species Corynebacterium maris 31 144 1 1
species Corynebacterium massiliense 21 128
species Corynebacterium mastitidis 10 2 50
species Corynebacterium matruchotii 53 85 2 126 2
species Corynebacterium minutissimum 1 195
species Corynebacterium mucifaciens 7 1
species Corynebacterium mustelae 30 5 58 1
species Corynebacterium mycetoides 3 26 159
species Corynebacterium nuruki 93 1
species Corynebacterium occultum 127
species Corynebacterium otitidis 18 1 1
species Corynebacterium pelargi 90
species Corynebacterium phocae 20 138
species Corynebacterium pilosum 1
species Corynebacterium poyangense 2
species Corynebacterium propinquum 51 19 1 1
species Corynebacterium provencense 49 1
species Corynebacterium pseudodiphtheriticum 2 1
species Corynebacterium pseudogenitalium 80
species Corynebacterium pseudopelargi 84
species Corynebacterium pseudotuberculosis 3 1 63
species Corynebacterium pyruviciproducens 190 103
species Corynebacterium ramonii 1
species Corynebacterium renale 1 6 110 2
species Corynebacterium resistens 41 16 141 1
species Corynebacterium riegelii 74 26 197
species Corynebacterium rouxii 49 1
species Corynebacterium sanguinis 136
species Corynebacterium segmentosum 245
species Corynebacterium silvaticum 1
species Corynebacterium simulans 222 1 1
species Corynebacterium singulare 206
species Corynebacterium sp. 2 30 1
species Corynebacterium sp. 1119 1
species Corynebacterium sp. 2300500 8
species Corynebacterium sp. 713182/2012 90
species Corynebacterium sp. 89349 1
species Corynebacterium sp. ATCC 6931 204 1
species Corynebacterium sp. CCUG 18436 1
species Corynebacterium sp. CNCTC7651 1
species Corynebacterium sp. jw37 240
species Corynebacterium sp. L2-79-05 41
species Corynebacterium sp. N159 9
species Corynebacterium sp. NML 97-0186 10
species Corynebacterium sp. NML00-0156 1
species Corynebacterium sp. NML96-0085 2 9
species Corynebacterium sp. NML97-0186 2
species Corynebacterium sp. NML98-0116 180
species Corynebacterium sp. SCR221107 1 1
species Corynebacterium sp. SS15.3 1
species Corynebacterium sp. sy039 30 2
species Corynebacterium sphenisci 18 116 1 1
species Corynebacterium spheniscorum 164 1
species Corynebacterium stationis 41 1 127 1
species Corynebacterium striatum 237 243 1 1
species Corynebacterium suicordis 6
species Corynebacterium sundsvallense 198 8
species Corynebacterium suranareeae 53
species Corynebacterium terpenotabidum 39 64 1
species Corynebacterium testudinoris 6 135 1
species Corynebacterium thomssenii 7 4
species Corynebacterium timonense 3 140
species Corynebacterium trachiae 28
species Corynebacterium tuberculostearicum 269 29
species Corynebacterium tuscaniense 21 46 1
species Corynebacterium ulcerans 25 168 1
species Corynebacterium ulceribovis 54
species Corynebacterium urealyticum 12 8 140 2
species Corynebacterium ureicelerivorans 61 3 195
species Corynebacterium urogenitale 112
species Corynebacterium uterequi 30 133 2
species Corynebacterium variabile 100 107 1
species Corynebacterium vitaeruminis 44 210 3 1 1
species Corynebacterium xerosis 191 130 2 1
species Corynebacterium yudongzhengii 134 1
species Corynebacterium zhongnanshanii 1
species Costertonia aggregata 2 1
species Couchioplanes caeruleus 39 1
species Coxiella burnetii 8 2
species Coxiella cheraxi 15
species Crassaminicella indica 1 2
species Crassaminicella profunda 2
species Crassaminicella thermophila 238 2 2 1
species CrAss-like virus sp. 2
species CrAss-like virus sp. ctOWe7 1
species CrAss-like virus sp. ctt4r3 1
species CrAss-like virus sp. ctYsL76 1
species CrAssphage apr34_000142F 1
species CrAssphage GF1-2_000079F 4
species CrAssphage LMMB 53 1
species CrAssphage sp. 8
species CrAssphage sp. C0526BW15 1
species CrAssphage sp. C0531BW4 1
species CrAssphage ZA 54 3
species Crateriforma conspicua 5
species Craurococcus sp. HM28-1 1
species Crenobacter cavernae 34
species Crenothrix polyspora 2
species Criblamydia sequanensis 43
species Criibacterium bergeronii 1
species Crinalium epipsammum 2 1 2
species Croceibacter atlanticus 7 1 1 1
species Croceibacterium atlanticum 15 1
species Croceicoccus marinus 16 1
species Croceicoccus naphthovorans 35 1
species Croceicoccus sp. Ery15 1
species Croceicoccus sp. Ery5 1
species Croceimicrobium hydrocarbonivorans 2
species Croceitalea dokdonensis 1
species Crocosphaera subtropica 2
species Cronobacter condimenti 25 1
species Cronobacter dublinensis 1 35 28 1 2 2
species Cronobacter malonaticus 21 1
species Cronobacter muytjensii 36 9
species Cronobacter sakazakii 51 23 69 4 3 1 2 1
species Cronobacter sp. JZ38 10
species Cronobacter turicensis 27 23 1
species Cronobacter universalis 19 1
species Cruoricaptor ignavus 81 1 1
species Cryobacterium arcticum 8 2
species Cryobacterium psychrophilum 1 3
species Cryobacterium psychrotolerans 10
species Cryobacterium soli 8 1 2
species Cryobacterium sp. KAR41 1
species Cryobacterium sp. Lc31-9 1
species Cryobacterium sp. LW097 14 1
species Cryobacterium sp. SO1 1
species Cryobacterium sp. SO2 2
species Cryomorpha ignava 136
species Cryptanaerobacter phenolicus 12 3
species Cryptobacterium curtum 636 1 149 1 2 1 2 1
species Cryptococcus neoformans 3 8
species Cryptococcus sp. SA15S01 10
species Cryptosporangium arvum 1
species Cryptosporidium parvum 6 4
species Cucumibacter marinus 2
species Cucurbitaria berberidis 1
species Culturomica massiliensis 8
species Cuneatibacter caecimuris 9 1 1
species Cupriavidus alkaliphilus 2
species Cupriavidus basilensis 3 55 1 2
species Cupriavidus campinensis 45
species Cupriavidus cauae 1
species Cupriavidus gilardii 4 3 1 74 1 1
species Cupriavidus laharis 3
species Cupriavidus malaysiensis 2
species Cupriavidus metallidurans 4 7 1 74 1 1
species Cupriavidus nantongensis 12 1
species Cupriavidus necator 73 4 2
species Cupriavidus neocaledonicus 10
species Cupriavidus oxalaticus 25
species Cupriavidus pampae 1
species Cupriavidus pauculus 2 149 1 1 2
species Cupriavidus pinatubonensis 29 1 1
species Cupriavidus respiraculi 1 2
species Cupriavidus sp. P-10 1
species Cupriavidus sp. SaCRH16 2
species Cupriavidus sp. SaPS20 2
species Cupriavidus sp. USMAA2-4 2
species Cupriavidus sp. USMAHM13 2
species Cupriavidus taiwanensis 1 1 137 4
species Curtobacterium albidum 6
species Curtobacterium flaccumfaciens 8 22 1
species Curtobacterium herbarum 1
species Curtobacterium pusillum 13 5
species Curtobacterium sp. 9128 10
species Curtobacterium sp. BH-2-1-1 5 1
species Curtobacterium sp. L6-1 1
species Curtobacterium sp. MR_MD2014 1
species Curtobacterium sp. SB12-20 1
species Curtobacterium sp. SGAir0471 6
species Curvibacter gracilis 62 6 2
species Curvibacter lanceolatus 92
species Curvibacter putative symbiont of Hydra magnipapillata 3
species Curvibacter sp. AEP1-3 7
species Cutaneotrichosporon oleaginosum 1 1
species Cutibacterium acnes 8 16 24 237 1 3 1 2
species Cutibacterium avidum 5 3 223 2
species Cutibacterium granulosum 2 2 128 2
species Cutibacterium modestum 46 2
species Cutibacterium phage P104B 1
species Cyanobacteria bacterium UBA2892 1
species Cyanobacterium aponinum 730 45 5 1 1
species cyanobacterium endosymbiont of Epithemia turgida 1 1
species cyanobacterium endosymbiont of Rhopalodia gibberula 1
species Cyanobium gracile 7 78 1 1
species Cyanobium sp. NIES-981 53
species Cyanophora biloba 1
species Cyanophora paradoxa 1 1
species Cyanoptyche gloeocystis 1
species Cyanothece sp. PCC 7425 3
species Cyberlindnera jadinii 4 4
species Cyberlindnera sargentensis 1
species Cyclobacteriaceae bacterium 20
species Cyclobacterium amurskyense 1 3 1
species Cyclobacterium lianum 1
species Cyclobacterium marinum 1 1 2
species Cycloclasticus oligotrophus 64
species Cycloclasticus pugetii 17
species Cycloclasticus sp. P1 1 1
species Cycloclasticus zancles 1
species Cyclonatronum proteinivorum 39 3 2
species Cylindrospermopsis raciborskii 2
species Cylindrospermum moravicum 1
species Cylindrospermum stagnale 1
species Cyphellophora europaea 1
species Cystobacter armeniaca 3 22
species Cystobacter badius 1
species Cystobacter fuscus 5 42 2
species Cytobacillus dafuensis 32 6 2
species Cytobacillus firmus 2
species Cytobacillus gottheilii 2
species Cytobacillus horneckiae 322
species Cytobacillus kochii 81 1 2 2
species Cytobacillus oceanisediminis 71 4 2
species Cytobacillus solani 2
species Cytobacillus spongiae 1 2
species Cytomegalovirus cercopithecinebeta5 1
species Cytophaga aurantiaca 24
species Cytophaga hutchinsonii 38 70 1 2
species Dacrymyces ancyleus 4
species Dactylococcopsis salina 3 1
species Dactylosporangium aurantiacum 1 2
species Dactylosporangium fulvum 5 2
species Dactylosporangium maewongense 65
species Dactylosporangium roseum 1
species Daejeonella composti 1
species Dasania marina 51
species Daucus carota 1
species Debaryomyces hansenii 5 8 9
species Dechloromonas agitata 4 2
species Dechloromonas aromatica 6 61
species Dechloromonas denitrificans 1
species Dechloromonas hortensis 456
species Dechloromonas sp. 85
species Dechloromonas sp. HYN0024 39
species Deefgea chitinilytica 1 7
species Deefgea piscis 1 2
species Deefgea rivuli 3 2
species Deefgea tanakiae 2
species Deferribacter autotrophicus 582 32 4
species Deferribacter desulfuricans 1 7 4 2
species Deferribacter thermophilus 5 1
species Deferrisoma camini 44 1
species Defluviicoccus sp. 15
species Defluviicoccus vanus 9 1 2
species Defluviitalea phaphyphila 1
species Defluviitalea raffinosedens 1
species Defluviitalea saccharophila 409 3 6 4 1
species Defluviitoga tunisiensis 28 3 1 2
species Dehalobacter restrictus 9 312 210 1 1 2
species Dehalobacter sp. CF 8 1 2
species Dehalobacter sp. DCA 1 2
species Dehalobacterium formicoaceticum 214 2 1 2
species Dehalococcoides mccartyi 1 66 230 1 1 1 2
species Dehalogenimonas alkenigignens 7
species Dehalogenimonas etheniformans 2
species Dehalogenimonas formicexedens 62 1 2
species Dehalogenimonas lykanthroporepellens 253 28 19 4
species Dehalogenimonas sp. WBC-2 4
species Deinobacterium chartae 1
species Deinococcus actinosclerus 38
species Deinococcus aerius 1
species Deinococcus aetherius 3 2
species Deinococcus aquaticus 2 1
species Deinococcus aquatilis 40
species Deinococcus caeni 2
species Deinococcus carri 5
species Deinococcus claudionis 10
species Deinococcus deserti 1 63 1 2
species Deinococcus ficus 104 2
species Deinococcus frigens 1
species Deinococcus geothermalis 46 32 6 57 1
species Deinococcus gobiensis 54 1
species Deinococcus grandis 15
species Deinococcus indicus 2
species Deinococcus irradiatisoli 64 1
species Deinococcus maricopensis 3 63 1 1
species Deinococcus metalli 2
species Deinococcus metallilatus 53
species Deinococcus murrayi 1 1
species Deinococcus peraridilitoris 1 22 1 1
species Deinococcus piscis 9 1
species Deinococcus proteolyticus 176 1 2 1
species Deinococcus psychrotolerans 39 2 1
species Deinococcus puniceus 19 1
species Deinococcus radiodurans 3 1 47
species Deinococcus radiophilus 1 2
species Deinococcus radiopugnans 6
species Deinococcus reticulitermitis 8 1
species Deinococcus sahariens 2
species Deinococcus soli (ex Zhang et al. 2011) 25 3
species Deinococcus sp. AJ005 44
species Deinococcus sp. Arct2-2 1
species Deinococcus sp. D7000 4
species Deinococcus sp. KNUC1210 2
species Deinococcus sp. NW-56 51 1 1
species Deinococcus sp. QL22 1
species Deinococcus taeanensis 1
species Deinococcus wulumuqiensis 1 123 1
species Deinococcus xinjiangensis 17
species Deinococcus yavapaiensis 19 5
species Delftia acidovorans 1 36 1
species Delftia deserti 21
species Delftia lacustris 20 49
species Delftia sp. BN-SKY3 1 14
species Delftia sp. Cs1-4 2
species Delftia sp. HK171 1 1
species Delftia tsuruhatensis 8 82 1
species Dellaglioa algida 150 11
species Delmidovirus intestinihominis 8
species Delmidovirus splanchnicus 8
species Demequina aurantiaca 22
species Demequina globuliformis 2
species Demequina lutea 72 1
species Demequina salsinemoris 5 3
species Demequina sp. TMPB413 2
species Dendrosporobacter quercicolus 82
species Denitratisoma oestradiolicum 180 25 115 1
species Denitratisoma sp. DHT3 64
species Denitrificimonas caeni 1
species Denitrobacter permanens 23
species Denitrobacterium detoxificans 13 245 1 2 2
species Denitrovibrio acetiphilus 2 48 3 2
species Dependoparvovirus anseriform1 1
species Dermabacter hominis 17 103 35
species Dermabacter jinjuensis 190
species Dermabacter sp. HFH0086 27
species Dermabacter vaginalis 130 1
species Dermacoccus abyssi 1 35
species Dermacoccus barathri 3
species Dermacoccus nishinomiyaensis 3 1 48 1
species Dermacoccus profundi 3
species Dermacoccus sp. SAI-028 1
species Dermatobacter hominis 2
species Dermatophilus congolensis 2 23 1
species Desemzia incerta 2 310
species Desertibacter xinjiangensis 4
species Deserticella xinjiangensis 22
species Desertivirga xinjiangensis 6 1
species Desmospora activa 14 1
species Desulfacinum infernum 5
species Desulfacinum subterraneum 287
species Desulfallas sapomandens 1
species Desulfallas thermosapovorans 70 2
species Desulfarculus baarsii 152 180 1 2
species Desulfatibacillum aliphaticivorans 135 4 9 2
species Desulfatibacillum alkenivorans 2 1 1
species Desulfatiferula olefinivorans 32
species Desulfatiglans anilini 20
species Desulfatiglans parachlorophenolica 7
species Desulfatirhabdium butyrativorans 2
species Desulfatitalea tepidiphila 9
species Desulfitibacter alkalitolerans 129 2 1
species Desulfitispora alkaliphila 79 1
species Desulfitobacterium chlororespirans 354 1
species Desulfitobacterium dehalogenans 2 112 8 18 2
species Desulfitobacterium dichloroeliminans 1 114 1 1 2
species Desulfitobacterium hafniense 236 9 26 3
species Desulfitobacterium metallireducens 3 1 1 147 1 2 2 1
species Desulfitobacterium sp. CR1 1
species Desulfitobacterium sp. PR 1
species Desulfobacca acetoxidans 2 28 9 1 2
species Desulfobacter hydrogenophilus 19 2
species Desulfobacter latus 1
species Desulfobacter postgatei 2 3 4 1
species Desulfobacterium indolicum 349
species Desulfobacula toluolica 50 8 9 2
species Desulfobaculum bizertense 1 2
species Desulfobaculum senezii 17
species Desulfobaculum xiamenense 27
species Desulfobotulus alkaliphilus 1
species Desulfobotulus sapovorans 2
species Desulfobulbus alkaliphilus 8
species Desulfobulbus elongatus 14 6
species Desulfobulbus oligotrophicus 2 1
species Desulfobulbus oralis 191 8 12 2
species Desulfobulbus propionicus 1 18 159 2
species Desulfobulbus rhabdoformis 3 3
species Desulfocapsa sulfexigens 3 2 13 8 3 2
species Desulfocarbo indianensis 142 3
species Desulfocella halophila 436 2 5
species Desulfococcus multivorans 5 73 8 8 2
species Desulfoconvexum algidum 1
species Desulfocurvibacter africanus 1 183 1 2
species Desulfocurvus thunnarius 3
species Desulfocurvus vexinensis 5
species Desulfofaba fastidiosa 51
species Desulfofaba gelida 5
species Desulfofaba hansenii 7 9
species Desulfofalx alkaliphila 1066
species Desulfofarcimen acetoxidans 144 283 104 1 4 2
species Desulfofrigus fragile 17 43
species Desulfofrigus oceanense 555 2
species Desulfofundulus australicus 170 128
species Desulfofundulus kuznetsovii 1 197 1
species Desulfofundulus solfataricus 1
species Desulfofundulus thermoacetoxidans 684 1
species Desulfofustis glycolicus 8
species Desulfoglaeba alkanexedens 260 53 2
species Desulfogranum marinum 148
species Desulfogranum mediterraneum 4
species Desulfohalobium retbaense 10 22 3 1
species Desulfohalophilus alkaliarsenatis 3
species Desulfohalotomaculum halophilum 537 93 1
species Desulfolucanica intricata 74
species Desulfoluna limicola 2
species Desulfolutivibrio sulfodismutans 1 164 1 1
species Desulfolutivibrio sulfoxidireducens 1
species Desulfomarina profundi 2
species Desulfomicrobium baculatum 1 1 198 4 15 2
species Desulfomicrobium escambiense 16 5
species Desulfomicrobium hypogeium 26
species Desulfomicrobium norvegicum 44
species Desulfomicrobium orale 72 202 9 12 2 1
species Desulfomicrobium sp. ZS1 1 1
species Desulfomonile limimaris 5
species Desulfomonile tiedjei 710 11 52 1 1 2
species Desulfonatronobacter acidivorans 6
species Desulfonatronospira thiodismutans 1
species Desulfonatronovibrio hydrogenovorans 8 4
species Desulfonatronovibrio magnus 4
species Desulfonatronovibrio thiodismutans 5
species Desulfonatronum alkalitolerans 5
species Desulfonatronum cooperativum 4 8
species Desulfonatronum lacustre 1
species Desulfonatronum thioautotrophicum 3
species Desulfonatronum thiosulfatophilum 1266 2
species Desulfonauticus autotrophicus 375 14 7
species Desulfonauticus submarinus 11 14
species Desulfonema ishimotonii 37
species Desulfonema limicola 7 2 1
species Desulfonema magnum 2 2
species Desulfonispora thiosulfatigenes 114
species Desulfopila aestuarii 2
species Desulfopila inferna 1
species Desulfoplanes formicivorans 25
species Desulforadius tongensis 134 1 1
species Desulforamulus aeronauticus 1 137
species Desulforamulus ferrireducens 141 1 1 2 1
species Desulforamulus hydrothermalis 1 18
species Desulforamulus putei 118 187
species Desulforamulus reducens 191 12 59 19 12 2
species Desulforamulus ruminis 4 213 5 18 2
species Desulforapulum autotrophicum 7 86 1 2
species Desulforegula conservatrix 79 2
species Desulforhabdus amnigena 1
species Desulforhopalus singaporensis 5 1
species Desulfosalsimonas propionicica 3
species Desulfosarcina alkanivorans 122 1 2
species Desulfosarcina cetonica 16
species Desulfosarcina ovata 147 140 2
species Desulfosarcina sp. BuS5 2
species Desulfosarcina variabilis 1
species Desulfosarcina widdelii 141 1 2
species Desulfoscipio geothermicus 16
species Desulfoscipio gibsoniae 3 177 1 1 2
species Desulfosediminicola flagellatus 101 2
species Desulfosediminicola ganghwensis 168 2
species Desulfosoma profundi 148 2
species Desulfosporomusa polytropa 2
species Desulfosporosinus acidiphilus 7 125 1 2 2
species Desulfosporosinus auripigmenti 222 1
species Desulfosporosinus burensis 67 1
species Desulfosporosinus hippei 96 83 1
species Desulfosporosinus lacus 614 2
species Desulfosporosinus meridiei 35 1 67 21 12 2
species Desulfosporosinus orientis 9 171 1 4 2
species Desulfosporosinus sp. FKA 1
species Desulfosporosinus youngiae 1
species Desulfosudis oleivorans 151 9 8 2
species Desulfotalea arctica 7
species Desulfotalea psychrophila 1 2 8 5 2
species Desulfothermus naphthae 12
species Desulfothermus okinawensis 1
species Desulfotignum phosphitoxidans 4
species Desulfotomaculum defluvii 1871 15
species Desulfotomaculum nigrificans 40 98 146 1 4 2
species Desulfotomaculum sp. OF05-3 3 6 4 1
species Desulfotruncus arcticus 9
species Desulfovectis peckii 117 1
species Desulfovermiculus halophilus 5
species Desulfovibrio aminophilus 185
species Desulfovibrio biadhensis 573
species Desulfovibrio caledoniensis 269
species Desulfovibrio cuneatus 15 263
species Desulfovibrio desulfuricans 300 324 58 254 27 4 1 26 9 1 2 3 1
species Desulfovibrio fairfieldensis 1422 4 250 11 18 6 3
species Desulfovibrio ferrophilus 202 128 1 2
species Desulfovibrio giganteus 1 2
species Desulfovibrio inopinatus 6
species Desulfovibrio intestinalis 55 3 2
species Desulfovibrio lacusfryxellense 4
species Desulfovibrio legallii 314 2 1 2
species Desulfovibrio litoralis 22 22 2
species Desulfovibrio longreachensis 15 12
species Desulfovibrio mangrovi 1 1
species Desulfovibrio oryzae 44 2
species Desulfovibrio oviles 6
species Desulfovibrio oxyclinae 17
species Desulfovibrio piger 1031 351 123 254 21 19 4 20 8 6 6 1 3
species Desulfovibrio psychrotolerans 423 55 5 1
species Desulfovibrio simplex 971 6
species Desulfovibrio sp. 7
species Desulfovibrio sp. 3_1_syn3 65 2
species Desulfovibrio sp. 6_1_46AFAA 12
species Desulfovibrio sp. 86 227 1 3
species Desulfovibrio sp. ABHU1SB 2
species Desulfovibrio sp. ABHU2SB 2
species Desulfovibrio sp. canine oral taxon 070 1
species Desulfovibrio sp. D4 3
species Desulfovibrio sp. F1 1
species Desulfovibrio sp. FW1012B 1
species Desulfovibrio sp. G11 44 4 11 2
species Desulfovibrio sp. J01 3
species Desulfovibrio sp. LNB1 5
species Desulfovibrio sp. LNB2 1
species Desulfovibrio sp. oral clone BB161 2
species Desulfovibrio sp. UNSW3caefatS 1
species Desulfovibrio subterraneus 2
species Desulfovibrionaceae bacterium 1 4
species Desulfovibrionaceae bacterium Marseille-P3669 1
species Desulfovirga adipica 38
species Desulfurella acetivorans 9 4 7
species Desulfuribacillus alkaliarsenatis 9 1
species Desulfurispira natronophila 5
species Desulfurispirillum alkaliphilum 893
species Desulfurispirillum indicum 13 96 1 2
species Desulfurispora thermophila 2634 878 2 2 2
species Desulfurivibrio alkaliphilus 6 108 4 3 2
species Desulfurobacterium thermolithotrophum 5 11 1 2
species Desulfurococcus mucosus 1
species Desulfuromonas acetoxidans 4 10
species Desulfuromonas chloroethenica 42
species Desulfuromonas palmitatis 1
species Desulfuromonas soudanensis 126 4 6 2
species Desulfuromonas sp. AOP6 100 2
species Desulfuromonas sp. DDH964 114 8 11 2
species Desulfuromonas svalbardensis 181 1
species Desulfuromonas thiophila 2 1
species Desulfuromonas versatilis 2
species Desulfuromusa bakii 1
species Desulfuromusa ferrireducens 2
species Desulfuromusa kysingii 1
species Desulfuromusa succinoxidans 1
species Dethiobacter alkaliphilus 83 12 1 2 1 1
species Dethiosulfatibacter aminovorans 513 1
species Dethiosulfovibrio peptidovorans 1 105 1
species Devosia beringensis 1
species Devosia enhydra 1
species Devosia geojensis 14 5 1
species Devosia ginsengisoli 2 49 1
species Devosia glacialis 1
species Devosia hwasunensis 49
species Devosia insulae 1 4
species Devosia limi 2 1
species Devosia neptuniae 3 1
species Devosia pacifica 2
species Devosia psychrophila 21
species Devosia salina 1 1
species Devosia sp. 1566 13 1 1
species Devosia sp. A16 52 3 2
species Devosia sp. D6-9 16
species Devosia sp. H5989 1
species Devosia sp. I507 17 1
species Devosia sp. MC521 1
species Devosia sp. SL43 1
species Devosia subaequoris 26
species Devosia submarina 1
species Devosia terrae 28
species Devosia yakushimensis 2
species Devriesea agamarum 43 2 1
species Diacronema lutheri 1
species Dialister hominis 127 1 1
species Dialister invisus 3208 729 34 51 3 7 6 6 4 1
species Dialister massiliensis 102 2 2
species Dialister micraerophilus 1350 245 58 5 5 4
species Dialister pneumosintes 200 47 210 1 4 1 1 3
species Dialister propionicifaciens 526 218 30 5 7
species Dialister sp. 1
species Dialister sp. CAG:486 1
species Dialister sp. E2_20 191
species Dialister sp. oral clone FY011 2
species Dialister sp. S4-23 5
species Dialister sp. S7MSR5 108
species Dialister succinatiphilus 822 56 7 7 2 2 6 3
species Diaminobutyricimonas sp. LJ205 11 1
species Diaphorobacter aerolatus 7
species Diaphorobacter nitroreducens 4 14
species Diaphorobacter ruginosibacter 2
species Diaphorobacter sp. HDW4A 71 1
species Diaphorobacter sp. HDW4B 64
species Diaphorobacter sp. JS3050 12
species Diaporthe batatas 1
species Dichelobacter nodosus 1 3 10 2
species Dichomitus squalens 1
species Dichotomaria diesingiana 1
species Dichotomicrobium thermohalophilum 20
species Dickeya aquatica 16 1
species Dickeya chrysanthemi 71 30
species Dickeya dadantii 31 2
species Dickeya dianthicola 66 22
species Dickeya fangzhongdai 8 1
species Dickeya lacustris 1
species Dickeya parazeae 1 1
species Dickeya phage phiDP10.3 1
species Dickeya poaceiphila 9 3 2
species Dickeya solani 19
species Dickeya sp. MK7 1
species Dickeya sp. Secpp 1600 3
species Dickeya zeae 181 1 1 2
species Dictyoglomus thermophilum 2 2 2
species Dictyoglomus turgidum 1 2
species Dictyomenia sonderi 1
species Dictyostelium discoideum 1 2 1
species Dictyostelium purpureum 1
species Didymella exigua 1
species Dielma fastidiosa 840 268 2 6 16 4 5 1 1
species Dientamoeba fragilis 1 23
species Dietzia alimentaria 136
species Dietzia kunjamensis 7 1
species Dietzia lutea 23
species Dietzia maris 4
species Dietzia natronolimnaea 1
species Dietzia psychralcaliphila 22 1
species Dietzia sp. JS16-p6b 1
species Dietzia sp. oral taxon 368 27
species Dietzia timorensis 11 48 2 1
species Dinoroseobacter shibae 26 1 1
species Diorhovirus intestinalis 8
species Diphylleia rotans 1
species Diplocloster agilis 3
species Dirofilaria immitis 1
species Dirofilaria sp. 'hongkongensis' 1
species Dissoconium aciculare 1
species Dissulfuribacter thermophilus 14
species Dissulfurimicrobium hydrothermale 2
species Dissulfurispira thermophila 1 2
species Dokdonella fugitiva 1859 2 1
species Dokdonella immobilis 35
species Dokdonella koreensis 5 1 18 1
species Dokdonia donghaensis 26 1
species Dokdonia sp. 4H-3-7-5 1
species Dokdonia sp. Dokd-P16 1 1
species Dokdonia sp. MED134 1 1
species Dokdonia sp. PRO95 2
species Dolichospermum compactum 1 1
species Dolichospermum curvum 2503 1 6
species Dolichospermum heterosporum 1
species Dolichospermum sp. UHCC 0315A 1 1
species Dolichospermum viguieri 16
species Dolosicoccus paucivorans 11 1
species Dolosigranulum pigrum 364 178 2
species Donellivirus gee 1
species Dongshaea marina 52 1 2
species Dorea formicigenerans 4234 1484 647 19 33 29 2 9 2 11 7 4 4 3 1 1
species Dorea hominis 4
species Dorea longicatena 1452 638 12 31 30 2 9 22 4 3 1
species Dorea sp. 1 4
species Dorea sp. 210702-DFI.3.125 4 1
species Dorea sp. 210702-DFI.3.17 4
species Dorea sp. 42_8 4
species Dorea sp. 5-2 1
species Dorea sp. AF24-7LB 4
species Dorea sp. AF36-15AT 4 1
species Dorea sp. AGR2135 3 25 4
species Dorea sp. AM10-31 4
species Dorea sp. AM13-35 3 1 4
species Dorea sp. AM58-8 1 4 1
species Dorea sp. BIOML-A1 4
species Dorea sp. CAG:105 4
species Dorea sp. CAG:317 1
species Dorea sp. Marseille-P4042 2 4
species Dorea sp. MB18-49 4
species Dorea sp. MC_33 1 6
species Dorea sp. OM02-2LB 4
species Dorea sp. OM07-5 4 1
species Draconibacterium halophilum 155 2
species Draconibacterium orientale 180 2
species Drancourtella massiliensis 2 6 3 1
species Drancourtella sp. An177 1 1
species Drulisvirus K244 2
species Drulisvirus KP34 1
species Drulisvirus KpS2 2
species Drulisvirus KpV74 2
species Drulisvirus SU552A 2
species DSM 19946 1
species Duffyella gerundensis 29 1 2
species Duganella dendranthematis 32
species Duganella lactea 1
species Duganella sp. Leaf126 1
species Dulcicalothrix desertica 48
species Dunaliella primolecta 2
species Dunaliella salina 1
species Duncaniella dubosii 261 1
species Duncaniella sp. B8 1 3
species Duncaniella sp. C9 3
species Duodenibacillus massiliensis 3 1 3 2 1
species Duodenibacillus sp. 2
species Dyadobacter alkalitolerans 254
species Dyadobacter beijingensis 90 17
species Dyadobacter chenhuakuii 1
species Dyadobacter chenwenxiniae 1
species Dyadobacter crusticola 1
species Dyadobacter fanqingshengii 1 1
species Dyadobacter fermentans 16 174 5 2
species Dyadobacter ginsengisoli 4
species Dyadobacter hamtensis 145 39
species Dyadobacter jejuensis 4
species Dyadobacter sandarakinus 2
species Dyadobacter sp. 32 32
species Dyadobacter sp. NIV53 2
species Dyadobacter tibetensis 4
species Dyella caseinilytica 1
species Dyella ginsengisoli 8
species Dyella japonica 3 16 1
species Dyella jiangningensis 18
species Dyella kyungheensis 2
species Dyella marensis 3
species Dyella sp. M7H15-1 16 1
species Dyella telluris 1
species Dyella terrae 1
species Dyella thiooxydans 2 29
species Dysgonomonas alginatilytica 212 3
species Dysgonomonas capnocytophagoides 236 420 4 1
species Dysgonomonas gadei 49 415 5 6 1
species Dysgonomonas hofstadii 31 8
species Dysgonomonas macrotermitis 585
species Dysgonomonas mossii 39 4
species Dysgonomonas sp. HDW5A 65 2
species Dysgonomonas sp. HDW5B 118 1 2
species Dysgonomonas sp. HGC4 1
species Dysgonomonas wimpennyi 3963 3 2 7
species Dysosmobacter acutus 1
species Dysosmobacter hominis 4
species Dysosmobacter segnis 4 1
species Dysosmobacter sp. 4
species Dysosmobacter sp. Marseille-Q4140 1
species Dysosmobacter welbionis 273 13 10 18 10 4 3 1
species Echinicola jeungdonensis 1
species Echinicola marina 1 2
species Echinicola pacifica 1
species Echinicola rosea 7 1 2
species Echinicola shivajiensis 44
species Echinicola soli 20 1
species Echinicola sp. 20G 2
species Echinicola strongylocentroti 41 1 2
species Echinicola vietnamensis 21 4 2
species Ectobacillus funiculus 54
species Ectobacillus panaciterrae 1
species Ectobacillus sp. JY-23 2
species Ectocarpus siliculosus 1
species Ectothiorhodosinus mongolicus 4
species Ectothiorhodospira haloalkaliphila 260 1 26
species Ectothiorhodospira imhoffii 540 1
species Ectothiorhodospira magna 1
species Ectothiorhodospira marina 36
species Ectothiorhodospira sp. BSL-9 16 1 2
species Ectothiorhodospiraceae bacterium 2226 56
species Ectothiorhodospiraceae bacterium BW-2 11
species Edaphobacter flagellatus 1
species Edaphobacter lichenicola 2
species Edaphobacter modestus 493 1
species Edaphobacter sp. 12200R-103 46 1
species Edaphobacter sp. 4G125 1
species Edwardsiella anguillarum 1
species Edwardsiella hoshinae 306 14 1
species Edwardsiella ictaluri 40 1
species Edwardsiella piscicida 8
species Edwardsiella sp. EA181011 2
species Edwardsiella tarda 29 4 2 1
species Effusibacillus consociatus 11
species Effusibacillus dendaii 2
species Effusibacillus lacus 1
species Effusibacillus pohliae 374 1
species Eganvirus ev186 1
species Eganvirus PsP3 1
species Eggerthella guodeyinii 1 1 2
species Eggerthella lenta 2744 1291 489 274 39 3 27 32 2 11 6 4 2 3 1 1
species Eggerthella sinensis 2150 172 32 4 1 3
species Eggerthella sp. 4
species Eggerthella sp. 1_3_56FAA 1 5 2
species Eggerthella sp. 51_9 2
species Eggerthella sp. AM16-19 1 2
species Eggerthella sp. BIOML-A1 2
species Eggerthella sp. BIOML-A3 2
species Eggerthella sp. BIOML-A4 2
species Eggerthella sp. BIOML-A5 2
species Eggerthella sp. CAG:209 2
species Eggerthella sp. CAG:298 3
species Eggerthella sp. E1 16
species Eggerthella sp. HGA1 3 69 18 2
species Eggerthella sp. SDG-2 1
species Eggerthella sp. YY7918 264 8 3 20 2
species Eggerthella timonensis 2
species Eggerthellaceae bacterium 1 4
species Eggerthia catenaformis 590 1 1
species Egibacter rhizosphaerae 10 1
species Egicoccus halophilus 17 1
species Ehrlichia chaffeensis 2
species Ehrlichia japonica 1
species Ehrlichia ovina 1402 1 2
species Ehrlichia ruminantium 5 4 1 1
species Eikenella corrodens 34 11 5 97 1 1 2
species Eikenella exigua 8 1
species Eimeria acervulina 1
species Eimeria maxima 1
species Eimeria mitis 1
species Eimeria necatrix 1
species Eimeria tenella 1
species Eisenbergiella massiliensis 7 15 5 7 1 1 1
species Eisenbergiella porci 1
species Eisenbergiella sp. 2 4
species Eisenbergiella tayi 1207 484 11 9 3 5 5 3 6 4 1 1
species Eisenibacter elegans 218
species Ekhidna lutea 1
species Elioraea tepida 2
species Elioraea tepidiphila 3
species Elizabethkingia anophelis 3 3 114 1 2
species Elizabethkingia bruuniana 1 1
species Elizabethkingia meningoseptica 3 6 51
species Elizabethkingia miricola 8 2
species Elizabethkingia sp. 2-6 1
species Elizabethkingia sp. JS20170427COW 19 2
species Elizabethkingia sp. M8 1
species Elizabethkingia ursingii 2 2
species Ellagibacter isourolithinifaciens 1 1
species Elstera litoralis 6
species Elusimicrobium minutum 83 1 2 2
species Emcibacter nanhaiensis 249 3
species Emergencia sp. 1XD21-10 1
species Emergencia timonensis 2 2 8 1 3 3 1
species Emiliania huxleyi 1
species Empedobacter brevis 5 33 1 2
species Empedobacter falsenii 1 2 19
species Empedobacter stercoris 3 1 1
species Emticicia aquatica 1
species Emticicia ginsengisoli 23 2
species Emticicia oligotrophica 3483 2 117 1 5
species Emticicia sediminis 130
species Emticicia sp. 21SJ11W-3 2
species Encephalitozoon hellem 8
species Endobacter medicaginis 1
species Endomicrobium proavitum 35 1 1
species endosymbiont GvMRE of Glomus versiforme 1
species endosymbiont of Acanthamoeba sp. UWC8 3
species endosymbiont of Euscepes postfasciatus 3
species endosymbiont of Lamellibrachia barhami 1
species endosymbiont of Pachyrhynchus infernalis 1
species endosymbiont of Ridgeia piscesae 1
species endosymbiont of Sipalinus gigas 1
species endosymbiont of unidentified scaly snail isolate Monju 67 3 1
species endosymbiont 'TC1' of Trimyema compressum 127 1 2
species Endozoicomonas euniceicola 2
species Endozoicomonas gorgoniicola 3
species Endozoicomonas montiporae 48 1
species Endozoicomonas sp. 4G 2
species Endozoicomonas sp. GU-1 1 2
species Endozoicomonas sp. SCSIO W0465 2
species Enhydrobacter aerosaccus 18
species Enorma massiliensis 238 1 2
species Enorma timonensis 1 1
species Ensifer adhaerens 69 1 2
species Ensifer canadensis 2
species Entamoeba dispar 1
species Entamoeba histolytica 3 1
species Enterobacter asburiae 7 14 91 1 3 2 1
species Enterobacter bugandensis 27 1 1
species Enterobacter cancerogenus 146 61 4 7 1 1
species Enterobacter chengduensis 27
species Enterobacter cloacae 289 10 28 259 10 3 1 18 3 7 1 2
species Enterobacter cloacae complex sp. 23
species Enterobacter cloacae complex sp. ECL405 1
species Enterobacter cloacae complex sp. ECNIH7 9
species Enterobacter cloacae complex sp. FDA-CDC-AR_0132 1 1
species Enterobacter cloacae complex sp. FDA-CDC-AR_0164 1
species Enterobacter hormaechei 1226 1 157 4 2 3 2
species Enterobacter huaxiensis 1
species Enterobacter kobei 34 2 1 1
species Enterobacter ludwigii 153 1 54 1 2
species Enterobacter mori 57 2 1
species Enterobacter nickellidurans 436 1
species Enterobacter oligotrophicus 29
species Enterobacter phage ENC20 1
species Enterobacter roggenkampii 57 1 2
species Enterobacter sichuanensis 16
species Enterobacter soli 13 35 3
species Enterobacter sp. 7
species Enterobacter sp. 18A13 8
species Enterobacter sp. 198 1
species Enterobacter sp. 638 27 1
species Enterobacter sp. A7 1
species Enterobacter sp. ABFQC 1
species Enterobacter sp. BIDMC 26 1
species Enterobacter sp. BIDMC 29 1
species Enterobacter sp. BIDMC 30 1
species Enterobacter sp. Bisph2 2
species Enterobacter sp. BS2-1 22
species Enterobacter sp. c111(2012) 1
species Enterobacter sp. c112(2012) 1
species Enterobacter sp. C2 1
species Enterobacter sp. Crenshaw 7
species Enterobacter sp. CRENT-193 2
species Enterobacter sp. DSM 30060 9
species Enterobacter sp. E1010703 1
species Enterobacter sp. E20 13 1
species Enterobacter sp. E76 39
species Enterobacter sp. EA-1 32
species Enterobacter sp. EC-NT1 3
species Enterobacter sp. FY-07 54 1
species Enterobacter sp. HK169 12
species Enterobacter sp. HP19 4
species Enterobacter sp. J49 1
species Enterobacter sp. LU1 13
species Enterobacter sp. N18-03635 16
species Enterobacter sp. NRS-1 2
species Enterobacter sp. ODB01 12
species Enterobacter sp. PDC34 1
species Enterobacter sp. Px6-4 2
species Enterobacter sp. R4-368 18 1
species Enterobacter sp. RFL1396 1
species Enterobacter sp. RHB15-C17 17
species Enterobacter sp. RHBSTW-00131 1
species Enterobacter sp. RHBSTW-00175 24
species Enterobacter sp. RHBSTW-00318 1
species Enterobacter sp. RHBSTW-00340 1
species Enterobacter sp. RHBSTW-00422 6 1
species Enterobacter sp. RHBSTW-00593 7 1
species Enterobacter sp. RHBSTW-00974 1
species Enterobacter sp. RHBSTW-00975 14 1
species Enterobacter sp. RHBSTW-00994 42 1
species Enterobacter sp. SA187 48 1 1
species Enterobacter sp. SCSS 1
species Enterobacter sp. SES19 13
species Enterobacter sp. SGAir0187 1
species Enterobacter sp. SPSA1 4
species Enterobacter sp. SRE01 1
species Enterobacter sp. T2 19
species Enterobacter sp. UDC345 39
species Enterobacter sp. UIWRF1325 2
species Enterobacter sp. WPR_3_1 1
species Enterobacter sp. Z1 1
species Enterobacteria phage CHB7 1
species Enterobacteria phage CP-1639 1
species Enterobacteria phage HK225 2
species Enterobacteria phage mEp021 3
species Enterobacteria phage P4 1
species Enterobacteria phage P-EibD 1
species Enterobacteria phage phi80 2
species Enterobacteria phage SfV 1
species Enterobacteria phage VT1-Sakai 1
species Enterobacteriaceae bacterium 1 5 3
species Enterobacteriaceae bacterium A-F18 11
species Enterobacteriaceae bacterium bta3-1 24
species Enterobacteriaceae bacterium ENNIH1 24 1
species Enterobacteriaceae bacterium ENNIH2 3
species Enterobacteriaceae bacterium ENNIH3 1
species Enterobacteriaceae bacterium MCC505 3
species Enterobacteriaceae bacterium S05 5
species Enterobacteriaceae bacterium strain FGI 57 58 3
species Enterobacteriaceae endosymbiont of Donacia clavipes 1
species Enterobacterial phage P-EibA 1
species Enterocloster alcoholdehydrogenati 1 1
species Enterocloster aldenensis 1256 4 16 6 9 8 1 1
species Enterocloster asparagiformis 12 5 20 4 2 3 3 1
species Enterocloster bolteae 276 35 25 27 9 11 11 4 3 1 1
species Enterocloster citroniae 1307 77 11 8 23 6 9 4 3 2 1
species Enterocloster clostridioformis 52 2 273 30 23 23 20 1 11 4 1 1
species Enterocloster hominis (ex Hitch et al. 2024) 1 1 9
species Enterocloster hominis (ex Liu et al. 2021) 2
species Enterocloster lavalensis 6 21 5 4 3 1 1
species Enterocloster sp. 4
species Enterocloster sp. 210928-DFI.2.20 4
species Enterocloster sp. OA11 2
species Enterococcus alcedinis 83
species Enterococcus aquimarinus 35
species Enterococcus asini 22 77
species Enterococcus avium 6 1 242 1 1 1 1 2
species Enterococcus camelliae 64 39
species Enterococcus canis 30 1
species Enterococcus casseliflavus 248 24 55 2 2 2 1
species Enterococcus cecorum 14 14 1 266 21 26 1 3
species Enterococcus columbae 6 43
species Enterococcus diestrammenae 2
species Enterococcus dispar 38 1 2
species Enterococcus durans 182 11 108 8 18 1 2
species Enterococcus faecalis 67 9 88 275 24 16 10 27 3 1 3 1
species Enterococcus faecium 127 8 2 274 27 1 21 31 1 2 3 1
species Enterococcus gallinarum 75 27 1 1 1 2 1
species Enterococcus gilvus 298 1 39 1 2 2
species Enterococcus haemoperoxidus 1 61
species Enterococcus hawaiiensis 84
species Enterococcus hermanniensis 16 18
species Enterococcus hirae 1 11 125 9 23 1 2
species Enterococcus innesii 1
species Enterococcus italicus 15 58 1
species Enterococcus lactis 519 1 1 1
species Enterococcus malodoratus 23
species Enterococcus mundtii 22 16 1 118 1 4 2
species Enterococcus pallens 18
species Enterococcus phage EF62phi 4
species Enterococcus phage EFC-1 1
species Enterococcus pseudoavium 10
species Enterococcus quebecensis 1
species Enterococcus raffinosus 2 1 2
species Enterococcus rotai 29
species Enterococcus saccharolyticus 19 2
species Enterococcus saigonensis 264 1 1 1
species Enterococcus silesiacus 173 27
species Enterococcus sp. 3
species Enterococcus sp. 079 1
species Enterococcus sp. 105332 1
species Enterococcus sp. 10F3_DIV0382 1
species Enterococcus sp. 1140_ESPC 1
species Enterococcus sp. 3G1_DIV0629 1
species Enterococcus sp. BSD2780120874b_170522_B6 1
species Enterococcus sp. BSM-130-P53-22D 1
species Enterococcus sp. BWR-S5 1
species Enterococcus sp. C6I11 23
species Enterococcus sp. CR-Ec1 9 2
species Enterococcus sp. CU9D 1
species Enterococcus sp. DA9 9 1
species Enterococcus sp. FDAARGOS_375 1 1
species Enterococcus sp. FM11-1 1
species Enterococcus sp. GMD1E 1
species Enterococcus sp. GMD2E 1
species Enterococcus sp. GMD3E 1
species Enterococcus sp. GMD4E 1
species Enterococcus sp. GMD5E 1
species Enterococcus sp. H57 1
species Enterococcus sp. HMSC034B11 1
species Enterococcus sp. HMSC035B04 1
species Enterococcus sp. HMSC035C10 1
species Enterococcus sp. HMSC055G03 1
species Enterococcus sp. HMSC056C08 1
species Enterococcus sp. HMSC058D07 1
species Enterococcus sp. HMSC05C03 1
species Enterococcus sp. HMSC060D07 1
species Enterococcus sp. HMSC060D09 1
species Enterococcus sp. HMSC060E05 1
species Enterococcus sp. HMSC061C05 1
species Enterococcus sp. HMSC063C12 1
species Enterococcus sp. HMSC063D12 1
species Enterococcus sp. HMSC063H10 1
species Enterococcus sp. HMSC065H03 1
species Enterococcus sp. HMSC065H12 1
species Enterococcus sp. HMSC067C01 1
species Enterococcus sp. HMSC069A01 1
species Enterococcus sp. HMSC070F12 1
species Enterococcus sp. HMSC072D11 1
species Enterococcus sp. HMSC072F02 1
species Enterococcus sp. HMSC072F07 1
species Enterococcus sp. HMSC072G01 1
species Enterococcus sp. HMSC073E07 1
species Enterococcus sp. HMSC073E08 1
species Enterococcus sp. HMSC074F07 1
species Enterococcus sp. HMSC076D08 1
species Enterococcus sp. HMSC076E04 1
species Enterococcus sp. HMSC077E04 1
species Enterococcus sp. HMSC077E07 1
species Enterococcus sp. HMSC34G12 1
species Enterococcus sp. HPCN18 1
species Enterococcus sp. HSIEG1 1
species Enterococcus sp. M190262 6
species Enterococcus sp. NBRC 3427 1
species Enterococcus sp. S101_ASV_20 1
species Enterococcus sp. S105_ASV_20 1
species Enterococcus sp. S109_ASV_20 1
species Enterococcus sp. S113_ASV_20 1
species Enterococcus sp. S117_ASV_20 1
species Enterococcus sp. S125_ASV_20 1
species Enterococcus sp. S129_ASV_20 1
species Enterococcus sp. S133_ASV_20 1
species Enterococcus sp. S141_ASV_20 1
species Enterococcus sp. S145_ASV_20 1
species Enterococcus sp. S149_ASV_20 1
species Enterococcus sp. S153_ASV_20 1
species Enterococcus sp. S161_ASV_20 1
species Enterococcus sp. S165_ASV_20 1
species Enterococcus sp. S173_ASV_20 1
species Enterococcus sp. S177_ASV_20 1
species Enterococcus sp. SI-4 16
species Enterococcus sp. SS2 1
species Enterococcus sp. T0168A.B-11 1
species Enterococcus sp. WCA-130-P53-23F 1
species Enterococcus sulfureus 12
species Enterococcus thailandicus 42 2
species Enterococcus ureasiticus 1
species Enterococcus wangshanyuanii 59 1 1 2
species Enterorhabdus sp. NM05_H27 3
species Enteroscipio rubneri 2
species Entomohabitans teleogrylli 1
species Entomomonas asaccharolytica 2
species Entomomonas moraniae 1 1
species Entomoplasma freundtii 1 1
species Entomospira culicis 2
species Ephemeroptericola cinctiostellae 2
species Epichloe festucae 4 1
species Epidermidibacterium keratini 59 1
species Epilithonimonas bovis 2
species Epilithonimonas caeni 33 1
species Epilithonimonas hispanica 2 1
species Epilithonimonas hungarica 7
species Epilithonimonas vandammei 9 2 2
species Eponavirus epona 21
species Epseptimavirus S124 1
species Ercella succinigenes 413
species Ereboglobus luteus 129 2
species Eremococcus coleocola 45 21
species Eremothecium cymbalariae 8
species Erwinia amylovora 20 81 19 2
species Erwinia billingiae 212 11 2
species Erwinia mallotivora 160
species Erwinia oleae 242
species Erwinia papayae 93
species Erwinia persicina 58 23 1
species Erwinia piriflorinigrans 76 1
species Erwinia psidii 264
species Erwinia pyrifoliae 104 10
species Erwinia rhapontici 180 52 1 1 2
species Erwinia soli 98
species Erwinia sorbitola 54 1
species Erwinia sp. E602 1 2
species Erwinia sp. Ejp617 4 1
species Erwinia sp. QL-Z3 3
species Erwinia sp. TA_AJ 1
species Erwinia tasmaniensis 446 20 1 1
species Erwinia tracheiphila 23 32 1
species Erwinia typographi 2
species Erwinia uzenensis 8
species Erysipelatoclostridium sp. An15 1
species Erysipelatoclostridium sp. An173 3
species Erysipelatoclostridium sp. DFI.2.3 1
species Erysipelothrix inopinata 690 1 4 1 1 6 2
species Erysipelothrix larvae 98 1 2
species Erysipelothrix muris 3972 3 3 7
species Erysipelothrix piscisicarius 34 1 2
species Erysipelothrix rhusiopathiae 194 1 2 2
species Erysipelothrix sp. HDW6A 120 2
species Erysipelothrix sp. HDW6B 59 1 2
species Erysipelothrix sp. HDW6C 36 2
species Erysipelotrichaceae bacterium 1 1 4
species Erysipelotrichaceae bacterium 2_2_44A 15 1
species Erysipelotrichaceae bacterium 21_3 14 1
species Erysipelotrichaceae bacterium 3_1_53 7 1
species Erysipelotrichaceae bacterium 5_2_54FAA 12 1
species Erysipelotrichaceae bacterium 6_1_45 21 1
species Erysipelotrichaceae bacterium 66202529 1 1
species Erysipelotrichaceae bacterium 7770_A6 2
species Erysipelotrichaceae bacterium AF15-26LB 1
species Erysipelotrichaceae bacterium AF19-24AC 1
species Erysipelotrichaceae bacterium AM07-12 1
species Erysipelotrichaceae bacterium AM07-35-1 1
species Erysipelotrichaceae bacterium CAG:64 1
species Erysipelotrichaceae bacterium GAM147 274 1 3 4
species Erysipelotrichaceae bacterium I46 10 1
species Erysipelotrichaceae bacterium MTC7 8
species Erysipelotrichaceae bacterium YH-RaF3-2-5 1
species Erysipelotrichaceae bacterium YH-RaF3-2-6 1
species Erysipelotrichales bacterium 1
species Erythrobacter aureus 3 1
species Erythrobacter litoralis 25 2
species Erythrobacter longus 1
species Erythrobacter mangrovi 10 1
species Erythrobacter neustonensis 2
species Erythrobacter ramosus 10
species Erythrobacter sp. 12
species Erythrobacter sp. HKB08 18 1
species Erythrobacter sp. HL-111 4 1
species Erythrobacter sp. KY5 6
species Erythrobacter sp. SDW2 1
species Erythrobacter sp. THAF29 2
species Escherichia albertii 2711 15 165 1 3 6 2
species Escherichia coli 2461 309 1 275 37 9 21 31 11 4 2 3 3 3 2 1
species Escherichia coli O157 typing phage 14 4
species Escherichia fergusonii 152 1 1 2 3 2
species Escherichia marmotae 95 2 4 3 2 2
species Escherichia phage BF17 1
species Escherichia phage BRET 1
species Escherichia phage DN1 1
species Escherichia phage HK639 1
species Escherichia phage inoa 4
species Escherichia phage magaca 4
species Escherichia phage mistaenkt 1
species Escherichia phage N7 3
species Escherichia phage navn 4
species Escherichia phage nom 4
species Escherichia phage PPwrbA_EC3734 1
species Escherichia phage vB_EcoM-689R6 1
species Escherichia phage vB_EcoS-640R1 1
species Escherichia ruysiae 1
species Escherichia sp. 1 3
species Escherichia sp. 0.2392 3
species Escherichia sp. 1_1_43 3
species Escherichia sp. 11.1596 1
species Escherichia sp. 11.1597 1
species Escherichia sp. 11.1600 1
species Escherichia sp. 12.2610 1
species Escherichia sp. 12.2612 1
species Escherichia sp. 14.0982 1
species Escherichia sp. 14.0985 1
species Escherichia sp. 14.0993 1
species Escherichia sp. 20412-1 1
species Escherichia sp. 4_1_40B 3
species Escherichia sp. 4726-5 1
species Escherichia sp. 7785 3
species Escherichia sp. 79.0191 3
species Escherichia sp. 8.2195 1
species Escherichia sp. 92.1228 1
species Escherichia sp. 93.0724 1
species Escherichia sp. 93.0743 1
species Escherichia sp. 93.0750 1
species Escherichia sp. 93.0816 1
species Escherichia sp. 93.1447 1
species Escherichia sp. 93.1462 1
species Escherichia sp. 93.1518 1
species Escherichia sp. 94.0001 3
species Escherichia sp. CH-7 1
species Escherichia sp. DSM 109009 3
species Escherichia sp. E.sYA108 3
species Escherichia sp. E4742 31 1 2
species Escherichia sp. Gen1 3
species Escherichia sp. HH26CH 3
species Escherichia sp. HH41S 3
species Escherichia sp. JL983 3
species Escherichia sp. KCJ4928 3
species Escherichia sp. KCJ4943 3
species Escherichia sp. KS167_9B 1
species Escherichia sp. KTE11 1
species Escherichia sp. KTE114 1
species Escherichia sp. KTE159 1
species Escherichia sp. KTE172 3
species Escherichia sp. KTE31 1
species Escherichia sp. KTE52 1
species Escherichia sp. KTE96 1
species Escherichia sp. M593 3
species Escherichia sp. M605 3
species Escherichia sp. M608 3
species Escherichia sp. M609 3
species Escherichia sp. M612 3
species Escherichia sp. M623 3
species Escherichia sp. M626 3
species Escherichia sp. Marseille-Q3837 1
species Escherichia sp. MOD1-EC1915 3
species Escherichia sp. MOD1-EC2449 3
species Escherichia sp. MOD1-EC4516 3
species Escherichia sp. MOD1-EC4550 3
species Escherichia sp. MOD1-EC4560 3
species Escherichia sp. MOD1-EC5110 1
species Escherichia sp. MOD1-EC5189 3
species Escherichia sp. MOD1-EC5287 3
species Escherichia sp. MOD1-EC5426 1
species Escherichia sp. MOD1-EC5427 1
species Escherichia sp. MOD1-EC5433 1
species Escherichia sp. MOD1-EC5434 1
species Escherichia sp. MOD1-EC5438 1
species Escherichia sp. MOD1-EC5449 1
species Escherichia sp. MOD1-EC5451 1
species Escherichia sp. MOD1-EC5457 1 1
species Escherichia sp. MOD1-EC5462 1
species Escherichia sp. MOD1-EC5495 1
species Escherichia sp. MOD1-EC5948 1
species Escherichia sp. MOD1-EC5949 1
species Escherichia sp. MOD1-EC5950 1
species Escherichia sp. MOD1-EC5990 3
species Escherichia sp. MOD1-EC6021 3
species Escherichia sp. MOD1-EC6096 1
species Escherichia sp. MOD1-EC6097 1
species Escherichia sp. MOD1-EC6098 1
species Escherichia sp. MOD1-EC6099 1
species Escherichia sp. MOD1-EC6100 1
species Escherichia sp. MOD1-EC6144 1
species Escherichia sp. MOD1-EC6147 1
species Escherichia sp. MOD1-EC6149 1
species Escherichia sp. MOD1-EC6150 1
species Escherichia sp. MOD1-EC6153 1
species Escherichia sp. MOD1-EC6154 1
species Escherichia sp. MOD1-EC6157 1
species Escherichia sp. MOD1-EC6158 1
species Escherichia sp. MOD1-EC6162 1
species Escherichia sp. MOD1-EC6163 1
species Escherichia sp. MOD1-EC6300 3
species Escherichia sp. MOD1-EC6475 1
species Escherichia sp. MOD1-EC6819 1
species Escherichia sp. MOD1-EC6842 1
species Escherichia sp. MOD1-EC7011 1
species Escherichia sp. MR 1
species Escherichia sp. NIC10 3
species Escherichia sp. NIC12-1 3
species Escherichia sp. NIC18-1 3
species Escherichia sp. NIC20 3
species Escherichia sp. NIC24-2-1 3
species Escherichia sp. NIC26-1 3
species Escherichia sp. NIC3-2 3
species Escherichia sp. NIC32-2 3
species Escherichia sp. NIC33 3
species Escherichia sp. NIC4-1 3
species Escherichia sp. NIC5-1 3
species Escherichia sp. NT35 3
species Escherichia sp. NT45 3
species Escherichia sp. R1 3
species Escherichia sp. R10 3
species Escherichia sp. R11 3
species Escherichia sp. R12 3
species Escherichia sp. R13 3
species Escherichia sp. R14 3
species Escherichia sp. R15 3
species Escherichia sp. R16 3
species Escherichia sp. R18 3
species Escherichia sp. R19 3
species Escherichia sp. R2 3
species Escherichia sp. R20 3
species Escherichia sp. R3 3
species Escherichia sp. R4 3
species Escherichia sp. R5 3
species Escherichia sp. R6 3
species Escherichia sp. R7 3
species Escherichia sp. R8 3
species Escherichia sp. R9 3
species Escherichia sp. S2_ASV_4 3
species Escherichia sp. S85_ASV_4 3
species Escherichia sp. SCLE84 16 3
species Escherichia sp. TC-EC600-tetX4 3
species Escherichia sp. TF21-Red 3
species Escherichia sp. TM-G17TGC 3
species Escherichia sp. TW09231 1
species Escherichia sp. TW09276 1
species Escherichia sp. TW09308 1
species Escherichia sp. TW10509 3
species Escherichia sp. TW11588 1 1
species Escherichia sp. TW14182 1 1
species Escherichia sp. TW15838 3
species Escherichia sp. UIWRF0478 1
species Escherichia sp. UIWRF0625 1
species Escherichia sp. UIWRF0784 1
species Escherichia sp. XD100 3
species Escherichia sp. XD11 3
species Escherichia sp. XD115 3
species Escherichia sp. XD12 3
species Escherichia sp. XD20 3
species Escherichia sp. XD24 3
species Escherichia sp. XD33 3
species Escherichia sp. XD97 3
species Escherichia sp. XJ148-1212-2NFX1 1
species Escherichia virus Lambda_4B5 1
species Escherichia/Shigella sp. 6
species Ethanoligenens harbinense 479 1297 266 4 5 6 3
species Eubacteriaceae bacterium 4
species Eubacteriaceae bacterium CHKCI005 1 3
species Eubacteriaceae bacterium DJF_CR57k1 1
species Eubacteriaceae bacterium Marseille-Q4139 1
species Eubacteriales bacterium 4
species Eubacterium barkeri 4
species Eubacterium callanderi 3435 2 17 270 4 3 4 5 3 1
species Eubacterium coprostanoligenes 1457 6 17 9 1
species Eubacterium limosum 420 94 272 12 9 28 1 1 3 1
species Eubacterium maltosivorans 268 9 1 23 1 2
species Eubacterium multiforme 1
species Eubacterium oxidoreducens 1456 6 1
species Eubacterium plexicaudatum 1 1
species Eubacterium pyruvativorans 949 2 3
species Eubacterium ramulus 1190 146 15 28 28 1 5 17 4 1
species Eubacterium rangiferina 2 1
species Eubacterium ruminantium 736 6 3 1
species Eubacterium segne 1 1
species Eubacterium sp. 1 4
species Eubacterium sp. 14-2 1
species Eubacterium sp. 3_1_31 9 1
species Eubacterium sp. 36_13 3
species Eubacterium sp. 38_16 3
species Eubacterium sp. 41_20 4
species Eubacterium sp. 45_250 2
species Eubacterium sp. A-44 4
species Eubacterium sp. AF15-50 1
species Eubacterium sp. AF16-48 1
species Eubacterium sp. AF17-7 3 1
species Eubacterium sp. AF18-3 1
species Eubacterium sp. AF19-12LB 3
species Eubacterium sp. AF19-17 1
species Eubacterium sp. AF22-9 1
species Eubacterium sp. am_0171 1
species Eubacterium sp. AM28-29 1
species Eubacterium sp. AM28-8LB 1
species Eubacterium sp. AM35-6AC 1
species Eubacterium sp. AM46-8 2 1
species Eubacterium sp. AM47-9 1
species Eubacterium sp. AM49-13BH 1 5 1
species Eubacterium sp. ARC-2 4
species Eubacterium sp. BIOML-A1 1
species Eubacterium sp. BIOML-A2 1
species Eubacterium sp. c-25 2 3
species Eubacterium sp. CAG:115 1
species Eubacterium sp. CAG:146 3
species Eubacterium sp. CAG:156 3
species Eubacterium sp. CAG:161 1
species Eubacterium sp. CAG:180 1 1
species Eubacterium sp. CAG:252 1
species Eubacterium sp. CAG:38 4
species Eubacterium sp. CAG:581 1
species Eubacterium sp. CAG:603 1
species Eubacterium sp. CAG:76 4
species Eubacterium sp. CAG:86 3
species Eubacterium sp. CAG76_36_125 4
species Eubacterium sp. ER2 10
species Eubacterium sp. LMAG:33 1
species Eubacterium sp. LMAG:35 1
species Eubacterium sp. LMAG:38 4
species Eubacterium sp. LMAG:50 3
species Eubacterium sp. LMAG:61 1
species Eubacterium sp. Marseille-P5640 1 1
species Eubacterium sp. MSJ-21 1
species Eubacterium sp. MSJ-33 2 3
species Eubacterium sp. OF10-16 1
species Eubacterium sp. OM08-24 2 1
species Eubacterium sp. oral clone BU014 7
species Eubacterium sp. oral strain A35MT 3
species Eubacterium sp. SA11 2 40
species Eubacterium sp. SB2 1
species Eubacterium sp. TF05-29 1
species Eubacterium sp. TF12-12 1
species Eubacterium sp. TM05-53 1
species Eubacterium sp. TM06-47 2 1
species Eubacterium sp. UBA2086 4
species Eubacterium sp. UNK.MGS-25 4
species Eubacterium sp. UNK.MGS-26 4
species Eubacterium uniforme 866 3 1 1
species Eubacterium ventriosum 1161 9 15 23 26 2 9 11 4 3 1
species Eubacterium xylanophilum 1364 1 2 9 1 9
species Eudoraea adriatica 80
species Eunotogramma sp. 1
species Euproctis digramma nucleopolyhedrovirus 1
species Euryhalocaulis caribicus 10
species Eutreptiella pomquetensis 1
species Euzebya pacifica 64 1 2
species Euzebya tangerina 2726 150 1 1
species Euzebyella marina 3 2
species Evansella caseinilytica 7
species Evansella cellulosilytica 30 2 2
species Evansella sp. LMS18 1 2
species Evtepia gabavorous 10 11 7 2
species Ewingella americana 28 1
species Exiguobacterium acetylicum 2
species Exiguobacterium alkaliphilum 2
species Exiguobacterium antarcticum 2 2
species Exiguobacterium aurantiacum 1 1
species Exiguobacterium chiriqhucha 1
species Exiguobacterium indicum 1
species Exiguobacterium marinum 1 2
species Exiguobacterium mexicanum 3 5 1
species Exiguobacterium profundum 55 1
species Exiguobacterium sibiricum 5 11 1 2
species Exiguobacterium soli 35 21
species Exiguobacterium sp. AT1b 1 1 1
species Exiguobacterium sp. Helios 1 2
species Exiguobacterium sp. N4-1P 14 3
species Exiguobacterium sp. S3-2 1
species Exiguobacterium taiwanense 1
species Exophiala oligosperma 1
species Exophiala spinifera 1
species Exserohilum turcicum 2
species Exsudoporus floridanus 1
species Extensimonas vulgaris 2
species Extibacter muris 8 3
species Ezakiella coagulans 402 17 1 5 2
species Ezakiella massiliensis 230 1 2
species Ezakiella peruensis 72 2 4
species Facklamia hominis 48 8 6
species Facklamia languida 65 13 33 2 1
species Facklamia miroungae 4 1
species Facklamia sp. 1440-97 1
species Facklamia sp. 164-92 8
species Faecalibacillus faecis 1 6 4
species Faecalibacillus intestinalis 1 2 9 4 3 1
species Faecalibacillus sp. H12 4 1
species Faecalibacillus sp. MSK20_93 4
species Faecalibacillus sp. TM111 4
species Faecalibacillus sp. TM498 4
species Faecalibacter bovis 1 1
species Faecalibacterium duncaniae 50 8 8 15 4 1
species Faecalibacterium hominis (ex Afrizal et al. 2022) 4 1
species Faecalibacterium longum 3 1
species Faecalibacterium prausnitzii 4644 1531 729 286 44 33 29 31 1 6 11 6 4 4 3 2 1
species Faecalibacterium sp. 3 1 4
species Faecalibacterium sp. 4P15 4 1
species Faecalibacterium sp. AF10-46 4 1
species Faecalibacterium sp. AF27-11BH 2 1 4 1
species Faecalibacterium sp. AF28-13AC 1
species Faecalibacterium sp. AM43-5AT 4 1
species Faecalibacterium sp. An121 1
species Faecalibacterium sp. An122 1 1
species Faecalibacterium sp. An192 1
species Faecalibacterium sp. An58 1
species Faecalibacterium sp. An77 1
species Faecalibacterium sp. BCRC 81149 4
species Faecalibacterium sp. BIOML-A1 4 1
species Faecalibacterium sp. BIOML-A2 6 4 1
species Faecalibacterium sp. BIOML-A3 4 1
species Faecalibacterium sp. BIOML-A4 4 1
species Faecalibacterium sp. CAG:74 3
species Faecalibacterium sp. CAG:74_58_120 3
species Faecalibacterium sp. CAG:82 4
species Faecalibacterium sp. canine oral taxon 147 573 2
species Faecalibacterium sp. CLA-AA-H233 4 1
species Faecalibacterium sp. CLA-AA-H254 4 1
species Faecalibacterium sp. CLA-AA-H283 4 1
species Faecalibacterium sp. DJF_VR20 27 2
species Faecalibacterium sp. HTF-F 2 4 3
species Faecalibacterium sp. I2-3-92 2 4 3
species Faecalibacterium sp. I3-3-33 2 3
species Faecalibacterium sp. I3-3-89 2 4 3
species Faecalibacterium sp. I4-1-79 2 1 3
species Faecalibacterium sp. I4-3-84 2 4 3
species Faecalibacterium sp. IP-1-18 1 2 3
species Faecalibacterium sp. IP-3-29 2 4 3
species Faecalibacterium sp. LMAG:44 4
species Faecalibacterium sp. Marseille-P9312 4 1
species Faecalibacterium sp. Marseille-P9590 4 1
species Faecalibacterium sp. Marseille-Q0746 4 1
species Faecalibacterium sp. Marseille-Q3530 1 1
species Faecalibacterium sp. Marseille-Q4137 4 1
species Faecalibacterium sp. Marseille-Q4164 4
species Faecalibacterium sp. Marseille-Q4896 4 1
species Faecalibacterium sp. OF03-6AC 4
species Faecalibacterium sp. OF04-11AC 6 4 1
species Faecalibacterium sp. OM04-11BH 3 1 1
species Faecalibacterium sp. UBA1697 4
species Faecalibacterium sp. UBA2087 4
species Faecalibaculum rodentium 261 1 1 3
species Faecalicatena contorta 4 1 2 1
species Faecalicatena faecalis 1
species Faecalicatena fissicatena 1 4
species Faecalicatena orotica 1052 2 7 4 1
species Faecalicatena sp. 1 4
species Faecalicatena sp. Marseille-Q4148 1
species Faecalicoccus acidiformans 870 2 4
species Faecalicoccus pleomorphus 194 1 1 1
species Faecalimicrobium dakarense 1
species Faecalimonas umbilicata 9 1 2 5 1
species Faecalispora jeddahensis 5
species Faecalispora sporosphaeroides 1511 1
species Faecalitalea cylindroides 523 201 273 3 18 17 5 2 1 1
species Falcatimonas natans 1 1 5
species Falcatimonas sp. MSJ-15 1
species Falseniella ignava 1038 2 6
species Falsihalocynthiibacter arcticus 2
species Falsiporphyromonas endometrii 375 2
species Falsirhodobacter algicola 1 1
species Falsirhodobacter halotolerans 1
species Falsiroseomonas riguiloci 1
species Falsiroseomonas stagni 12
species Falsiroseomonas tokyonensis 1
species Falsiroseomonas wooponensis 1
species Fangia hongkongensis 14
species Fannyhessea vaginae 315 2 4 2 1
species Fastidiosipila sanguinis 161 20 253 1 1 3 2
species Feifania hominis 3
species Felis catus 3
species Fenollaria massiliensis 820 1 3 2 1 7 2
species Fenollaria timonensis 1 3 1
species Fermentimonas caenicola 240 1 2
species Ferribacterium limneticum 1 2
species Ferrigenium kumadai 1
species Ferrimicrobium acidiphilum 74 2 1
species Ferrimonas balearica 85 2 2
species Ferrimonas futtsuensis 3 1
species Ferrimonas kyonanensis 1
species Ferrimonas lipolytica 1 1
species Ferrimonas marina 3
species Ferrimonas pelagia 35
species Ferrimonas sp. SCSIO 43195 2
species Ferriphaselus amnicola 39
species Ferrithrix thermotolerans 319
species Ferroglobus placidus 1
species Ferrovibrio denitrificans 2
species Ferrovibrio terrae 66 2
species Ferrovum myxofaciens 3 1
species Ferruginibacter albus 2
species Ferruginibacter alkalilentus 2
species Ferruginibacter lapsinanis 1 1
species Ferruginibacter paludis 1
species Ferruginibacter yonginensis 7
species Fervidicella metallireducens 18 1
species Fervidicoccus fontis 1
species Fervidobacterium islandicum 25 1 2
species Fervidobacterium nodosum 1 3 2
species Fervidobacterium pennivorans 16 4 1 1 1
species Fibrella aestuarina 1 156 3
species Fibrella sp. ES10-3-2-2 83 1 2
species Fibrobacter intestinalis 330 128 1
species Fibrobacter succinogenes 3 160 183 1 1 2
species Fibroporia radiculosa 1
species Fictibacillus arsenicus 115 1 3 2
species Fictibacillus enclensis 16
species Fictibacillus phosphorivorans 81 3 2
species Fictibacillus solisalsi 31
species Filifactor alocis 534 461 252 9 2 14 2
species Filifactor villosus 937 30
species Filimonas lacunae 63 3 2
species Filimonas sp. 1
species Filomicrobium fusiforme 1
species Filomicrobium insigne 1
species Fimbriimonadaceae bacterium 1
species Fimbriimonadales bacterium 1
species Fimbriimonas ginsengisoli 73 37 2 2
species Finegoldia magna 1682 1097 378 274 21 2 3 29 8 4 1 2
species Finegoldia sp. BIOML-A1 1
species Finegoldia sp. BV3C29 17
species Finegoldia sp. MVA6 1
species Finegoldia sp. S5-A7 25
species Finegoldia sp. S8 F7 108
species Finegoldia sp. S9 AA1-5 3 62
species Firmicutes bacterium AF12-30 3 9 1
species Firmicutes bacterium AF16-15 3 10 4
species Firmicutes bacterium AF19-2LB 4
species Firmicutes bacterium AF22-6AC 3 7 4
species Firmicutes bacterium AF25-13AC 3 10 4
species Firmicutes bacterium AF36-19BH 3 7 4
species Firmicutes bacterium AF36-3BH 3 10 4
species Firmicutes bacterium AM10-47 2 5 2
species Firmicutes bacterium AM29-6AC 4
species Firmicutes bacterium AM31-12AC 3 7 2
species Firmicutes bacterium AM41-5BH 2 2
species Firmicutes bacterium AM43-11BH 3 7 2
species Firmicutes bacterium AM55-24TS 3 10 4
species Firmicutes bacterium AM59-13 3 7 4
species Firmicutes bacterium ASF500 9 1
species Firmicutes bacterium CAG:102 4
species Firmicutes bacterium CAG:103 3
species Firmicutes bacterium CAG:110 18 3
species Firmicutes bacterium CAG:114 2
species Firmicutes bacterium CAG:124 3
species Firmicutes bacterium CAG:129 4
species Firmicutes bacterium CAG:129_59_24 4
species Firmicutes bacterium CAG:137 3
species Firmicutes bacterium CAG:145 1 1
species Firmicutes bacterium CAG:170 10 3
species Firmicutes bacterium CAG:176 3
species Firmicutes bacterium CAG:194 2
species Firmicutes bacterium CAG:212 2
species Firmicutes bacterium CAG:227 2
species Firmicutes bacterium CAG:238 1
species Firmicutes bacterium CAG:24 1 4
species Firmicutes bacterium CAG:240 1
species Firmicutes bacterium CAG:24053_14 1
species Firmicutes bacterium CAG:270 1
species Firmicutes bacterium CAG:308 1
species Firmicutes bacterium CAG:313 1
species Firmicutes bacterium CAG:321 1
species Firmicutes bacterium CAG:41 2 1 4
species Firmicutes bacterium CAG:56 5 4
species Firmicutes bacterium CAG:65 1 4
species Firmicutes bacterium CAG:65_45_313 4
species Firmicutes bacterium CAG:83 1 1 4
species Firmicutes bacterium CAG:94 1 2
species Firmicutes bacterium CAG:95 1 3
species Firmicutes bacterium CAG_194_44_15 2
species Firmicutes bacterium OM04-13BH 2 9 2
species Firmicutes bacterium OM07-11 3 6 2
species Firmicutes bacterium OM08-11AC 1 8 4
species Firmicutes bacterium TM09-10 3 7 4
species Firmicutes bacterium UBA1191 1
species Firmicutes bacterium zrk13 12
species Firmicutes str. C34 1
species Fischerella sp. NIES-3754 3 1 1
species Fischerella sp. NIES-4106 1
species Flagellatimonas centrodinii 2
species Flagellimonas flava 1
species Flagellimonas lutaonensis 1 4 3
species Flagellimonas lutimaris 91
species Flagellimonas marinaquae 1
species Flagellimonas maritima 5 2 2
species Flagellimonas oceani 40 2
species Flagellimonas olearia 4
species Flagellimonas ruestringensis 5 1 1
species Flagellimonas sp. CMM7 1
species Flagellimonas sp. HMM57 2
species Flammeovirga aprica 21
species Flammeovirga arenaria 9
species Flammeovirga kamogawensis 1 1
species Flammeovirga pacifica 1245 1
species Flammeovirga pectinis 20 4 2
species Flammeovirga sp. MY04 118 3 2
species Flammeovirga yaeyamensis 2
species Flammeovirgaceae bacterium 311 99 4
species Flaviaesturariibacter amylovorans 1
species Flavicella marina 4
species Flaviflexus ciconiae 63 1 1
species Flaviflexus equikiangi 31 1
species Flaviflexus salsibiostraticola 48 2 2
species Flavihumibacter cheonanensis 2
species Flavihumibacter fluvii 2
species Flavihumibacter petaseus 1
species Flavihumibacter rivuli 1 1
species Flavilitoribacter nigricans 9
species Flaviramulus sp. BrNp1-15 1
species Flavisolibacter ginsengisoli 29
species Flavisolibacter ginsenosidimutans 37 1 1
species Flavisolibacter sp. 1
species Flavisolibacter tropicus 58 2
species Flavivirga eckloniae 7 1 2
species Flavivirga jejuensis 2
species Flavobacteriaceae bacterium 37 1
species Flavobacteriaceae bacterium 3519-10 62 1
species Flavobacteriaceae bacterium UJ101 7 3
species Flavobacteriales bacterium UBA1820 4 1
species Flavobacterium acetivorans 1
species Flavobacterium aestivum 1 1
species Flavobacterium akiainvivens 2
species Flavobacterium album 113 1 1
species Flavobacterium algicola 4
species Flavobacterium alkalisoli 79 2
species Flavobacterium ammonificans 2
species Flavobacterium ammoniigenes 2
species Flavobacterium anhuiense 30 3 1
species Flavobacterium antarcticum 8 1
species Flavobacterium aquaticum 2
species Flavobacterium aquatile 6
species Flavobacterium arcticum 5 3
species Flavobacterium arsenatis 1
species Flavobacterium azooxidireducens 2
species Flavobacterium bernardetii 1
species Flavobacterium bizetiae 1
species Flavobacterium branchiicola 1
species Flavobacterium branchiophilum 21 4 3 1
species Flavobacterium caeni 1
species Flavobacterium cauense 6 1
species Flavobacterium cerinum 1 1
species Flavobacterium channae 2
species Flavobacterium cheniae 5
species Flavobacterium collinsii 1
species Flavobacterium columnare 76 4 1
species Flavobacterium commune 24 2
species Flavobacterium compostarboris 5
species Flavobacterium crassostreae 1 1
species Flavobacterium croceum 1
species Flavobacterium crocinum 31 1 1
species Flavobacterium cupriresistens 2
species Flavobacterium cyclinae 1
species Flavobacterium defluvii 10
species Flavobacterium denitrificans 2
species Flavobacterium endoglycinae 1
species Flavobacterium faecale 3 3 1
species Flavobacterium filum 1
species Flavobacterium flevense 2
species Flavobacterium fluviale 1 3 1
species Flavobacterium galactosidilyticum 1
species Flavobacterium gelidilacus 9
species Flavobacterium gilvum 21 4 3
species Flavobacterium ginsengisoli 1
species Flavobacterium glycines 2
species Flavobacterium gyeonganense 1 1
species Flavobacterium haoranii 1 7
species Flavobacterium indicum 4 1
species Flavobacterium inviolabile 65
species Flavobacterium johnsoniae 1 1 60 1 1
species Flavobacterium kamogawaensis 6
species Flavobacterium kingsejongi 10 2
species Flavobacterium lindanitolerans 1
species Flavobacterium litorale 1
species Flavobacterium longum 4
species Flavobacterium luteolum 1
species Flavobacterium magnum 4 1 1
species Flavobacterium micromati 3 1
species Flavobacterium nackdongense 11 2 1
species Flavobacterium nitratireducens 2
species Flavobacterium nitrogenifigens 1 2 1
species Flavobacterium omnivorum 1
species Flavobacterium pallidum 41 1 1
species Flavobacterium pectinovorum 6
species Flavobacterium procerum 1
species Flavobacterium psychrophilum 33 2
species Flavobacterium psychrotrophum 46 4 2
species Flavobacterium sangjuense 7 1
species Flavobacterium sasangense 5
species Flavobacterium sediminis 77 3
species Flavobacterium soli 2 3
species Flavobacterium sp. 2
species Flavobacterium sp. 140616W15 4 1 1
species Flavobacterium sp. CHNK8 1
species Flavobacterium sp. CS20 2
species Flavobacterium sp. I3-2 13 1
species Flavobacterium sp. K5-23 1
species Flavobacterium sp. KACC 22758 1 1
species Flavobacterium sp. KBS0721 3 2
species Flavobacterium sp. KJ005 1
species Flavobacterium sp. M31R6 11 2
species Flavobacterium sp. MDT1-60 2
species Flavobacterium sp. N2820 1 1
species Flavobacterium sp. N502536 1
species Flavobacterium sp. SGY001 1
species Flavobacterium sp. SLB02 37
species Flavobacterium sp. Sr18 5 1
species Flavobacterium sp. xlx-214 1 1
species Flavobacterium succinicans 29
species Flavobacterium suncheonense 1
species Flavobacterium swingsii 3 1
species Flavobacterium terrae 1
species Flavobacterium terrigena 11
species Flavobacterium weaverense 3 1
species Flavobacterium yanchengense 1
species Flavonifractor plautii 1473 686 276 22 26 29 26 9 1 11 7 6 4 3 1
species Flavonifractor sp. 2
species Flavonifractor sp. AGMB03687 1
species Flavonifractor sp. An10 1 1
species Flavonifractor sp. An100 1 1
species Flavonifractor sp. An135 2
species Flavonifractor sp. An4 1
species Flavonifractor sp. An9 1 1
species Flavonifractor sp. An91 3 1
species Flavonifractor sp. DFI.6.63 2
species Flectobacillus lacus 1
species Flectobacillus major 1
species Flexibacter flexilis 7 1
species Flexistipes sinusarabici 98 7 1 1
species Flexithrix dorotheae 19
species Flintibacter butyricus 1 9
species Flintibacter faecis 4 1
species Flintibacter hominis 4
species Flintibacter sp. 1
species Flintibacter sp. KGMB00164 269 2 2 1 3 1
species Flocculibacter collagenilyticus 1
species Floricoccus penangensis 2
species Fluctibacter halophilus 1
species Fluoribacter dumoffii 1
species Fluviibacter phosphoraccumulans 2
species Fluviicola hefeinensis 13
species Fluviicola taffensis 24 1 2
species Fluviimonas pallidilutea 636 1
species Fluviispira sanaruensis 3
species Fodinibius salinus 5 2
species Fodinicola feengrottensis 2
species Fodinicurvata halophila 5
species Fomitiporia mediterranea 1
species Fontibacillus aquaticus 3
species Fonticella tunisiensis 200
species Formicincola oecophyllae 5
species Formosa agariphila 1
species Formosa algae 3
species Formosa sediminum 2
species Formosa sp. Hel1_31_208 1
species Formosa sp. Hel1_33_131 3 1
species Formosa sp. Hel3_A1_48 1 1
species Formosa sp. L2A11 6 2
species Fournierella massiliensis 1 2 7 5 1
species Francisella adeliensis 1 1
species Francisella frigiditurris 1 2
species Francisella halioticida 2 3 1
species Francisella hispaniensis 205 1 1
species Francisella noatunensis 1
species Francisella orientalis 1
species Francisella persica 1
species Francisella philomiragia 3 3
species Francisella salimarina 1
species Francisella sp. 774b 3
species Francisella sp. FSC1006 1 1
species Francisella sp. LA112445 1 1
species Francisella tularensis 11 2 5 2 2 1
species Francisella uliginis 3
species Franconibacter helveticus 16
species Frankia alni 7 11 1 1
species Frankia casuarinae 8 1
species Frankia sp. QA3 1
species Frankia symbiont of Datisca glomerata 3
species Frankineae bacterium MT45 8 1
species Frateuria aurantia 1 46 1 2
species Frateuria terrea 4
species Frederiksenia canicola 5 2 1
species Fretibacter rubidus 17
species Fretibacterium fastidiosum 21 243 1 8
species Friedmanniella luteola 1 1 23
species Frigidibacter mobilis 1 15 1
species Frigoribacterium faeni 2
species Frigoriglobus tundricola 1
species Frischella perrara 2 5 2 2
species Frisingicoccus caecimuris 8 4
species Frisingicoccus sp. 6
species Frondihabitans sp. 762G35 10
species Frondihabitans sp. PAMC 28766 20 1 1
species Fructilactobacillus florum 3
species Fructilactobacillus fructivorans 1 5 1
species Fructilactobacillus ixorae 1
species Fructilactobacillus lindneri 181 135 5 1
species Fructilactobacillus sanfranciscensis 45 14 1 11 1 1
species Fructilactobacillus vespulae 5
species Fructobacillus fructosus 92 9 1
species Fructobacillus pseudoficulneus 128 43
species Fucophilus fucoidanolyticus 4
species Fuerstiella marisgermanici 35 2
species Fulvibacter tottoriensis 1
species Fulvitalea axinellae 85
species Fulvivirga imtechensis 19
species Fulvivirga kasyanovii 12 78
species Fulvivirga ligni 1
species Fulvivirga lutea 3
species Fulvivirga maritima 1 3
species Fulvivirga ulvae 1 1
species Fundidesulfovibrio butyratiphilus 1668 103 3
species Fundidesulfovibrio putealis 1 5
species fungal sp. 1
species Furfurilactobacillus rossiae 8 48 1 2
species Furfurilactobacillus siliginis 1916 22 1
species Fusarium fujikuroi 2 8
species Fusarium oxysporum 8 1
species Fusarium subglutinans 1
species Fusarium venenatum 8
species Fusarium verticillioides 8
species Fuscovulum blasticum 1 17 3 1
species Fusibacter fontis 119
species Fusibacter paucivorans 368 143
species Fusibacter sp. 1
species Fusibacter tunisiensis 27 6
species Fusicatenibacter faecihominis 4 1
species Fusicatenibacter saccharivorans 1495 665 1 9 11 22 11 4 1 1
species Fusicatenibacter sp. 4
species Fusicatenibacter sp. 2789STDY5834925 4
species Fusicatenibacter sp. CLA-AA-H213 1 4 1
species Fusobacterium animalis 32 20 9 2
species Fusobacterium canifelinum 29 1 2
species Fusobacterium equinum 8 28 20
species Fusobacterium gastrosuis 96 2
species Fusobacterium gonidiaformans 1055 9 1 113 8 20 1 2
species Fusobacterium hominis 1 2
species Fusobacterium hwasookii 79 5 2
species Fusobacterium mortiferum 185 12 140 20 4 2
species Fusobacterium naviforme 809 3 1
species Fusobacterium necrogenes 5 4
species Fusobacterium necrophorum 11 23 217 9 21 2
species Fusobacterium nucleatum 480 290 26 249 23 29 1 2 3 3
species Fusobacterium perfoetens 103 4 1
species Fusobacterium periodonticum 324 96 20 38 8 15 3 1
species Fusobacterium polymorphum 20 2 3
species Fusobacterium pseudoperiodonticum 171 1 1 2
species Fusobacterium russii 16 4
species Fusobacterium simiae 40 1
species Fusobacterium sp. ACB2 31
species Fusobacterium sp. CAG:815 1
species Fusobacterium sp. CM1 1
species Fusobacterium sp. CM21 5 1
species Fusobacterium sp. CM55 1
species Fusobacterium sp. DJF_B100 12
species Fusobacterium sp. OBRC1 6
species Fusobacterium sp. oral taxon 203 21 1
species Fusobacterium sp. RMA 2453 2
species Fusobacterium ulcerans 54 15 232 21 26 3
species Fusobacterium varium 100 8 210 20 1 22 1 2 3
species Fusobacterium vincentii 20 2 2
species Gabonia massiliensis 1 4
species Gabonibacter chumensis 1
species Gabonibacter massiliensis 1 8 1
species Gaeumannomyces tritici 1
species Gaiella occulta 58 2
species Galbibacter sp. BG1 7 1
species Galdieria partita 3
species Galdieria sp. 1
species Galenea microaerophila 58 2
species Gallaecimonas mangrovi 6 1
species Gallibacterium anatis 4 25 1 2
species Gallibacterium melopsittaci 84 1
species Gallibacterium salpingitidis 52
species Gallicola barnesae 88
species Gallintestinimicrobium propionicum 1
species Gallionella capsiferriformans 26 47 1 2
species Gallionella ferruginea 743 1
species gamma proteobacterium 10BT 1
species gamma proteobacterium HdN1 14 1
species gamma proteobacterium NT2-2 1
species gamma proteobacterium SS-5 133 1
species Gammapapillomavirus 12 1
species Gammapapillomavirus 15 1
species Gammapapillomavirus 18 1
species Gammapapillomavirus sp. 1
species Gammaproteobacteria bacterium DM2 1
species Ganoderma boninense 1
species Garciella nitratireducens 26 2
species Gardnerella piotii 2
species Gardnerella sp. S3PF20 18
species Gardnerella swidsinskii 2
species Gardnerella vaginalis 191 172 27 213 1 1 2 1 3
species Garicola koreensis 2
species Garritya polymorpha 2
species Geitlerinema sp. PCC 7407 48 2 1
species Gelderlandvirus cgg41 1
species Gelria glutamica 21 2
species Gelria sp. Kuro-4 2
species Gemella bergeri 16 4 2
species Gemella cuniculi 4304 3
species Gemella haemolysans 249 247 1 1 2 2
species Gemella morbillorum 127 182 2 4 1 2
species Gemella sanguinis 142 232 1 13 1 2 4 3 2
species Gemella sp. 933-88 1 21
species Gemella sp. ND 6198 28 2
species Gemella sp. oral strain A31SC 2
species Gemella sp. oral taxon 928 55 1
species Gemella sp. zg-570 2
species Gemelliphila asaccharolytica 430 6 2 3
species Gemelliphila palaticanis 9 1
species Geminicoccus roseus 99 5
species Geminisphaera colitermitum 11
species Geminocystis herdmanii 1
species Geminocystis sp. NIES-3708 1 1 2
species Geminocystis sp. NIES-3709 1 2
species Gemmata massiliana 1
species Gemmata obscuriglobus 3 10 9 2
species Gemmata sp. SH-PL17 2
species Gemmataceae bacterium 32
species Gemmatimonas aurantiaca 9 4 21 1 1
species Gemmatimonas groenlandica 56 2
species Gemmatimonas phototrophica 10 17 2
species Gemmatirosa kalamazoonensis 9 160 2
species Gemmiger formicilis 1366 1 14 14 10 9 9 4 1
species Gemmiger gallinarum 1
species Gemmiger qucibialis 6
species Gemmiger sp. 4
species Gemmiger sp. An120 1
species Gemmiger sp. An50 3 1
species Gemmiger sp. An87 1
species Gemmobacter aquarius 12 4
species Gemmobacter fulvus 2
species Gemmobacter nectariphilus 1
species Gemsvirus gv5004652 1
species Geoalkalibacter ferrihydriticus 7
species Geoalkalibacter subterraneus 2 140 1 1
species Geoanaerobacter pelophilus 10 9 2 3
species Geobacillus anatolicus 5 2
species Geobacillus bogazici 8
species Geobacillus genomosp. 3 8 1 1
species Geobacillus jurassicus 1
species Geobacillus kaustophilus 3
species Geobacillus lituanicus 9
species Geobacillus sp. 1024 3
species Geobacillus sp. 46C-IIa 1
species Geobacillus sp. WCH70 1
species Geobacillus sp. Y4.1MC1 1
species Geobacillus stearothermophilus 51 27 1 1 2
species Geobacillus subterraneus 113 1 2
species Geobacillus thermocatenulatus 8 28 1
species Geobacillus thermodenitrificans 1 22 1
species Geobacillus thermoparaffinivorans 15
species Geobacillus vulcani 12
species Geobacter anodireducens 56
species Geobacter benzoatilyticus 2
species Geobacter hydrogenophilus 8
species Geobacter metallireducens 145 2 2
species Geobacter pickeringii 13 114 2 2
species Geobacter psychrophilus 1
species Geobacter sp. 50
species Geobacter sp. DSM 9736 15 1
species Geobacter sp. FeAm09 208 2
species Geobacter sp. M18 138
species Geobacter sp. M21 101 3
species Geobacter sp. SVR 2
species Geobacter sulfurreducens 166 1 2
species Geodermatophilus obscurus 4 2 19 2
species Geodermatophilus poikilotrophus 19
species Geofilum rubicundum 137
species Geomicrobium halophilum 48
species Geomicrobium sediminis 6
species Geomonas nitrogeniifigens 1
species Geomonas oryzisoli 1
species Geomonas paludis 2
species Geomonas sp. RF6 2
species Geomonas subterranea 1 1
species Geopsychrobacter electrodiphilus 2
species Georgenia deserti 13
species Georgenia faecalis 19 1
species Georgenia ferrireducens 2
species Georgenia halophila 12 4
species Georgenia ruanii 1
species Georgenia sediminis 36
species Georgenia soli 3
species Georgenia sp. TF02-10 1
species Georgenia wutianyii 19 1
species Georgenia yuyongxinii 40 1
species Georgfuchsia toluolica 2 1
species Georhizobium profundi 14 1 2
species Geosmithia morbida 1
species Geosporobacter ferrireducens 253 2 5 3
species Geosporobacter subterraneus 1
species Geotalea daltonii 86 3 1
species Geotalea toluenoxydans 114
species Geotalea uraniireducens 7 82 1 2
species Geothermobacter ehrlichii 2
species Geothrix fermentans 2262 766 2 2
species Geotrichum candidum 5
species Geovibrio ferrireducens 1
species Geovibrio thiophilus 12 30 3 2
species Gephyromycinifex aptenodytis 35 1
species Giardia intestinalis 7 4
species Gibbsiella quercinecans 30 3 1
species Giesbergeria anulus 1
species Giesbergeria voronezhensis 1
species Gilliamella apicola 12 1
species Gilliamella sp. ESL0405 1
species Gilliamella sp. ESL0441 2
species Gilliamella sp. ESL0443 1
species Gillisia illustrilutea 2
species Gillisia limnaea 3100 2 1
species Gillisia sandarakina 200 50
species Gillisia sp. Hel1_33_143 1
species Gilvibacter sp. SZ-19 17
species Gilvimarinus agarilyticus 1
species Gimesia benthica 1
species Gimesia maris 2 1
species Gimesia panareensis 1
species Glaciecola amylolytica 74 1
species Glaciecola nitratireducens 563 3 2
species Glaciecola punicea 41 84
species Glaciimonas alpina 2
species Glaciimonas sp. PAMC28666 1
species Glaesserella parasuis 4 64 2 1
species Glaesserella sp. 15-184 11 1 2
species Gleimia coleocanis 63 9
species Gleimia europaea 73 52 1
species Gleimia hominis 1
species Globicatella sanguinis 2 1
species Globicatella sulfidifaciens 1
species Gloeobacter kilaueensis 9 39 1 2
species Gloeobacter violaceus 7 114 1 1
species Gloeocapsa sp. PCC 7428 2
species Gloeomargarita lithophora 1
species Gloeophyllum trabeum 1
species Gloeothece citriformis 2
species Gloeothece membranacea 1
species Gloeothece verrucosa 2
species Gluceribacter canis 1
species Gluconacetobacter diazotrophicus 19 1
species Gluconobacter albidus 4
species Gluconobacter japonicus 4
species Gluconobacter kondonii 4
species Gluconobacter morbifer 2
species Gluconobacter oxydans 5 82 1
species Glutamicibacter ardleyensis 2
species Glutamicibacter arilaitensis 38 1
species Glutamicibacter creatinolyticus 1 53
species Glutamicibacter halophytocola 37 1
species Glutamicibacter mishrai 24 1
species Glutamicibacter nicotianae 2 2
species Glutamicibacter protophormiae 2
species Glutamicibacter soli 340 1
species Glutamicibacter sp. ZJUTW 1
species Glutamicibacter uratoxydans 53 80
species Glycocaulis albus 1
species Glycocaulis alkaliphilus 30 1 1
species Glycomyces endophyticus 1
species Glycomyces fuscus 1
species Glycomyces lechevalierae 1
species Glycomyces mayteni 1
species Glycomyces sambucus 2
species Glycomyces tenuis 103 2
species Gokushovirus WZ-2015a 30
species Gonium quadratum 1
species Gorbachella massiliensis 1 1 1
species Gordonia alkanivorans 2 1
species Gordonia amarae 1
species Gordonia australis 7
species Gordonia bronchialis 147 30 1 1
species Gordonia hirsuta 1
species Gordonia hydrophobica 1
species Gordonia insulae 16 1
species Gordonia iterans 22 3 1
species Gordonia jinhuaensis 44
species Gordonia mangrovi 2
species Gordonia neofelifaecis 1
species Gordonia phthalatica 29 1
species Gordonia polyisoprenivorans 49 2 2
species Gordonia rubripertincta 22
species Gordonia sp. 135 1
species Gordonia sp. 1D 1
species Gordonia sp. JH63 5
species Gordonia sp. KTR9 13 1
species Gordonia sp. PDNC005 1
species Gordonia sp. PP30 1
species Gordonia sp. X0973 17
species Gordonia sp. YC-JH1 29
species Gordonia sputi 1
species Gordonia terrae 22
species Gordonia westfalica 4
species Gordonia zhaorongruii 15
species Gordonibacter massiliensis (ex Traore et al. 2017) 270 1 2 1 1
species Gordonibacter pamelaeae 804 425 271 5 23 1 5 3
species Gordonibacter sp. 28C 2
species Gordonibacter sp. An232A 1
species Gordonibacter sp. Marseille-P4307 1
species Gordonibacter urolithinfaciens 408 77 272 2 4 2 2 2 3
species Gottfriedia acidiceleris 1 2
species Gottschalkia acidurici 114 202 1 6 2
species Gottschalkia purinilytica 91 3 2 1 2 1
species Gracilibacillus bigeumensis 24
species Gracilibacillus boraciitolerans 282
species Gracilibacillus caseinilyticus 1 2
species Gracilibacillus dipsosauri 53
species Gracilibacillus halophilus 14
species Gracilibacillus orientalis 28
species Gracilibacillus salinarum 1 2
species Gracilibacillus salitolerans 43 2
species Gracilibacter thermotolerans 718 3 5
species Gracilimonas mengyeensis 23
species Gracilimonas rosea 7
species Gracilimonas tropica 382 2 1
species Gracilinema caldarium 4 1 2
species Gramella sp. MAR_2010_102 1
species Gramella sp. MAR_2010_147 1
species Gramella sp. MT6 1
species Granulibacter bethesdensis 2 101 3
species Granulicatella adiacens 1523 1 316 35 8 2 5 2
species Granulicatella balaenopterae 2
species Granulicatella elegans 110 156 21 1 1 1 2
species Granulicatella para-adiacens 1
species Granulicatella sp. HMSC30F09 1
species Granulicella arctica 1
species Granulicella cerasi 29
species Granulicella mallensis 31 2
species Granulicella rosea 2
species Granulicella sp. 5B5 21
species Granulicella sp. WH15 52 1
species Granulicella tundricola 252 61 2
species Granulosicoccus antarcticus 34 17 1 2
species Granulosicoccus coccoides 6
species Granulosicoccus marinus 3
species Granulosicoccus undariae 1
species Gregarina niphandrodes 1
species Grimontia hollisae 57 1
species Grimontia kaedaensis 2
species Gryllotalpicola ginsengisoli 11
species Gryllotalpicola protaetiae 13 1 1
species Guapiacu virus 1
species Gudongella oleilytica 172 1 2 2
species Guggenheimella bovis 559 2 5
species Guillardia theta 1
species Guizotia abyssinica 22
species Gulbenkiania mobilis 2
species Gulosibacter bifidus 129 17 29
species Gulosibacter molinativorax 2
species Gulosibacter sediminis 1
species Guopingia tenuis 4
species gut metagenome 1
species Guyparkeria halophila 35 1 53 2
species Guyparkeria hydrothermalis 2
species Gymnodinialimonas ceratoperidinii 2
species Gynuella sunshinyii 57 2 1 2
species Haematobacter massiliensis 30 2 1
species Haematococcus lacustris 1
species Haematomicrobium sanguinis 1
species Haematospirillum jordaniae 4 2 1
species Haemonchus contortus 2
species Haemophilus aegyptius 3
species Haemophilus haemolyticus 53 36 173 1 5 1 1
species Haemophilus influenzae 16 25 206 1 2 1 2
species Haemophilus paracuniculus 5
species Haemophilus parahaemolyticus 717 63 1 1 2
species Haemophilus parainfluenzae 3470 1031 523 253 15 15 15 9 8 1 3 2
species Haemophilus paraphrohaemolyticus 1
species Haemophilus pittmaniae 237 3 145 1 2 1
species Haemophilus quentini 70 1
species Haemophilus sp. 11p18 1
species Haemophilus sp. CCUG 60358 5
species Haemophilus sp. HMSC061E01 1
species Haemophilus sp. HMSC71H05 2 1
species Haemophilus sp. oral taxon 036 101 1 1
species Haemophilus sp. 'paraurethrae' 1
species Haemophilus sputorum 1 5 2 2
species Hafnia alvei 14 41 12 2 7 2
species Hafnia paralvei 28 3
species Hafnia sp. CBA7124 11
species Hahella chejuensis 1 116 7 3 1
species Hahella ganghwensis 3 60
species Hahella sp. KA22 2 2
species Haladaptatus halobius 1
species Haladaptatus pallidirubidus 1
species Halalkaliarchaeum desulfuricum 1
species Halalkalibacter krulwichiae 50 2 2
species Halalkalibacter nanhaiisediminis 1
species Halalkalibacter okhensis 4
species Halalkalibacter wakoensis 1
species Halalkalibacterium halodurans 40 3 2
species Halamphora americana 1
species Halamphora calidilacuna 1
species Halanaeroarchaeum sulfurireducens 1
species Halanaerobacter chitinivorans 35 4
species Halanaerobacter lacunarum 1
species Halanaerobaculum tunisiense 6
species Halanaerobium alcaliphilum 15 1
species Halanaerobium congolense 2
species Halanaerobium fermentans 11
species Halanaerobium hydrogeniformans 61 1 1 2
species Halanaerobium praevalens 109 4 2
species Halanaerobium saccharolyticum 2
species Halanaerobium salsuginis 5
species Halapricum desulfuricans 1
species Halapricum salinum 1
species Halarchaeum sp. CBA1220 1 1
species Halarcobacter anaerophilus 4 2
species Halarcobacter bivalviorum 8 5 3 1
species Halarcobacter ebronensis 24 1 1
species Halarsenatibacter silvermanii 100
species Haliangium ochraceum 10 32 89 3 1
species Haliangium tepidum 2 6
species Haliea salexigens 6
species Halimeda minima 1
species Halioglobus japonicus 1 9 1
species Halioglobus maricola 14 2
species Halioglobus pacificus 23
species Haliscomenobacter hydrossis 1 128 75 3 2
species Hallella bergensis 289 190 14 2 1
species Hallella colorans 2
species Hallella multisaccharivorax 394 276 6 1
species Haloactinopolyspora alba 2
species haloarchaeon 3A1-DGR 4
species Haloarcula marismortui 3 1
species Haloarcula pellucida 1
species Halobacillus aidingensis 4 1
species Halobacillus amylolyticus 1 1
species Halobacillus halophilus 76 3 2
species Halobacillus karajensis 12
species Halobacillus kuroshimensis 4
species Halobacillus litoralis 50 2
species Halobacillus locisalis 8
species Halobacillus mangrovi 77 1 2
species Halobacillus naozhouensis 2
species Halobacillus profundi 2
species Halobacillus salinarum 1
species Halobacillus salinus 3
species Halobacillus seohaensis 9
species Halobacillus shinanisalinarum 2
species Halobacteriovorax litoralis 6 2
species Halobacteriovorax marinus 20 33 5 2
species Halobacteriovorax sp. BALOs_7 1 1
species Halobacterium hubeiense 4
species Halobacterium salinarum 1
species Halobacterium sp. DL1 2
species Halobacteroides elegans 1
species Halobacteroides halobius 7 31 1 2
species Halobaculum sp. CBA1158 1
species Halobellus limi 10 1
species Halobellus ramosii 1
species Halobiforma lacisalsi 1 1
species Halocatena marina 1
species Halocella cellulosilytica 11
species Halocella sp. SP3-1 137 4
species Halochromatium glycolicum 88
species Halochromatium roseum 13 8
species Halochromatium salexigens 275 209 2
species Halodesulfovibrio oceani 1 3
species Halodesulfurarchaeum formicicum 1
species Haloechinothrix alba 3
species Haloferax gibbonsii 1 2
species Haloferax mediterranei 2
species Haloferula harenae 19
species Haloferula helveola 14
species Haloferula phyci 9
species Haloferula rosea 3 2
species Haloferula sargassicola 1
species Halogeometricum borinquense 1
species Haloglycomyces albus 1
species Halolactibacillus miurensis 37
species Halolamina sp. CBA1230 3 1
species Halomarina litorea 1
species Halomicrobium salinisoli 1
species Halomicrobium sp. LC1Hm 2 1
species Halomicronema excentricum 1
species Halomicronema hongdechloris 19 3 2
species Halomonas aestuarii 25 1
species Halomonas alkaliantarctica 1
species Halomonas almeriensis 49
species Halomonas beimenensis 38 1
species Halomonas binhaiensis 8 1
species Halomonas caseinilytica 27
species Halomonas chromatireducens 28
species Halomonas cibimaris 163
species Halomonas cupida 5
species Halomonas elongata 19 1
species Halomonas flava 3
species Halomonas fontilapidosi 28
species Halomonas halocynthiae 6
species Halomonas halodenitrificans 5
species Halomonas huangheensis 1 8 1
species Halomonas hydrothermalis 12 14 1
species Halomonas johnsoniae 5
species Halomonas magadiensis 4
species Halomonas maura 2
species Halomonas meridiana 4
species Halomonas nitritophilus 2
species Halomonas ramblicola 2 2
species Halomonas sabkhae 6
species Halomonas salina 5
species Halomonas sediminis 1
species Halomonas shengliensis 4
species Halomonas socia 7 1
species Halomonas sp. 1513 6 3
species Halomonas sp. A3H3 1
species Halomonas sp. CKK8 1
species Halomonas sp. DN3 2
species Halomonas sp. GFAJ-1 3
species Halomonas sp. HG01 9
species Halomonas sp. JS92-SW72 10 1
species Halomonas sp. KO116 3 1
species Halomonas sp. LR3S48 1 1
species Halomonas sp. MCCC 1A13316 1
species Halomonas sp. N3-2A 1
species Halomonas sp. PGE1 4
species Halomonas sp. SF2003 1
species Halomonas sp. SH5A2 2
species Halomonas sp. THAF12 14
species Halomonas sp. THAF5a 10
species Halomonas sp. YLGW01 2
species Halonatronum saccharophilum 3
species Halopenitus persicus 2
species Halopiger xanaduensis 1
species Haloplanus rallus 3
species Haloplanus rubicundus 2
species Haloplanus sp. GDY1 1
species Haloplasma contractile 29 1 1
species Halopolyspora alba 203 2
species Haloprofundus salilacus 1
species Haloprofundus sp. MHR1 1
species Halopseudomonas litoralis 21
species Halopseudomonas maritima 1 1
species Halopseudomonas nanhaiensis 1
species Halopseudomonas pachastrellae 10
species Halopseudomonas pelagia 2 38
species Halopseudomonas phragmitis 8 1 2
species Halopseudomonas sabulinigri 17
species Halopseudomonas salegens 17
species Halopseudomonas xinjiangensis 11
species Haloquadratum walsbyi 1
species Halorarum salinum 1
species Halorhabdus sp. CBA1104 1
species Halorhabdus tiamatea 2
species Halorhabdus utahensis 2
species Halorhodospira abdelmalekii 95
species Halorhodospira halochloris 113 4 1 2
species Halorhodospira halophila 5 43 1 1
species Halorhodospira neutriphila 3
species Halorientalis litorea 1
species Halorientalis sp. IM1011 1
species Halorubrum ezzemoulense 3
species Halorubrum lacusprofundi 2
species Halorubrum salinarum 2
species Halorubrum sp. CBA1229 4
species Halorubrum sp. PV6 2
species Halorubrum trapanicum 4
species Halosimplex litoreum 1
species Halosimplex rubrum 1
species Halosolutus gelatinilyticus 1
species Halospina denitrificans 8
species Halospirulina tapeticola 1
species Halostagnicola larsenii 1 1
species Halostella pelagica 1
species Halotalea alkalilenta 1 32 1
species Haloterrigena salifodinae 1
species Halothece sp. PCC 7418 1
species Halothermothrix orenii 231 11 2 2 6 2 2
species Halothiobacillus diazotrophicus 24 1
species Halothiobacillus kellyi 30 2
species Halothiobacillus neapolitanus 4 47 1 2
species Halovivax cerinus 1
species Halovivax sp. KZCA124 2
species Halpernia marina 5
species Halydictyon mirabile 1
species Hamadaea tsunoensis 1
species Hankyongella ginsenosidimutans 19 1
species Hanseniaspora uvarum 4
species Haploplasma axanthum 18 1 4 2
species Haploplasma cavigenitalium 232 18 2
species Haploplasma modicum 1
species Harryflintia acetispora 1 4 3 2
species Hartmannibacter diazotrophicus 55 2 1
species Hathewaya histolytica 4599 6 223 23 24 1 7 2
species Hathewaya limosa 101 71 4 3
species Hathewaya proteolytica 256 956 2 1
species Hazenella coriacea 26
species Helcococcus kunzii 10 102 5 110
species Helcococcus ovis 140 20
species Helcococcus seattlensis 2 2
species Helcococcus sueciensis 17 137 5
species Helicobacter ailurogastricus 2
species Helicobacter anseris 3
species Helicobacter apodemus 1 2 2
species Helicobacter aurati 1
species Helicobacter baculiformis 2 1
species Helicobacter bilis 2 1 1
species Helicobacter bizzozeronii 1
species Helicobacter brantae 1
species Helicobacter canadensis 4 20 1
species Helicobacter canis 6 3
species Helicobacter cetorum 1 2
species Helicobacter cholecystus 1 1
species Helicobacter cinaedi 14 1 2 1 2
species Helicobacter cynogastricus 3
species Helicobacter enhydrae 1 2
species Helicobacter equorum 2 1
species Helicobacter felis 1
species Helicobacter ganmani 4 2
species Helicobacter heilmannii 1
species Helicobacter hepaticus 2 3 1 1
species Helicobacter himalayensis 1 1
species Helicobacter macacae 12
species Helicobacter marmotae 1
species Helicobacter mastomyrinus 5 4
species Helicobacter mesocricetorum 1 1
species Helicobacter mustelae 2 1
species Helicobacter pametensis 1 1
species Helicobacter pullorum 1 1 2
species Helicobacter pylori 3 1 191 23 5 2 1
species Helicobacter rappini 6
species Helicobacter rodentium 1 9
species Helicobacter saguini 2
species Helicobacter suis 1 1 2
species Helicobacter suncus 1346 1 1
species Helicobacter trogontum 1 1
species Helicobacter typhlonius 2 4 2 1
species Helicobacter valdiviensis 2
species Helicobacter winghamensis 1 1
species Heliimonas saccharivorans 10
species Heliobacterium mobile 21
species Heliobacterium sp. N15.MGS-306 2
species Heliobacterium sulfidophilum 2
species Heliomicrobium gestii 1
species Heliomicrobium modesticaldum 241 1 1 2
species Heliophilum fasciatum 52
species Heliorestis acidaminivorans 1
species Heliorestis baculata 272 1
species Heliorestis convoluta 70 2
species Heliorestis daurensis 2 3
species Heliothrix oregonensis 3
species Hellea balneolensis 8
species Helmutkoenigia isoptericolens 7
species Henningerozyma blattae 9
species Henriciella aquimarina 4
species Henriciella litoralis 5
species Hephaestia caeni 2
species Herbaspirillum aquaticum 36
species Herbaspirillum chlorophenolicum 1209 1 3
species Herbaspirillum frisingense 37 1 1
species Herbaspirillum hiltneri 13
species Herbaspirillum huttiense 1 1 2 36
species Herbaspirillum magnetovibrio 807 1
species Herbaspirillum robiniae 43 2 1
species Herbaspirillum rubrisubalbicans 3 6 51 2
species Herbaspirillum seropedicae 6 214 61 1 1
species Herbaspirillum sp. 3R-12 1
species Herbaspirillum sp. AU13035 15
species Herbaspirillum sp. meg3 13 4 2
species Herbaspirillum sp. S20-88 9
species Herbaspirillum sp. YR522 14
species Herbiconiux sp. L3-i23 1
species Herbiconiux sp. SALV-R1 27 1
species Herbinix hemicellulosilytica 613 1 4
species Herbinix luporum 267 2 2 4 3 1
species Herelleviridae sp. 4
species Herminiimonas aquatilis 156 1
species Herminiimonas arsenicoxydans 24 3
species Herminiimonas arsenitoxidans 4 1
species Herpetomonas muscarum 1
species Herpetosiphon aurantiacus 2 1
species Herposiphonia versicolor 1
species Hespellia porcina 1402 9 1 1 6
species Hespellia stercorisuis 1235 2 1 1 1
species Heterobasidion irregulare 1 1
species Heterodera glycines 1
species Heterostelium album 1
species Heterostelium pallidum 1
species Heyndrickxia coagulans 152 1 243 1 3 2 1
species Heyndrickxia ginsengihumi 2
species Heyndrickxia oleronia 1 2 1 2
species Heyndrickxia vini 1 2
species Hippea alviniae 1
species Hippea jasoniae 1
species Hippea maritima 9 2 2
species Hirschia baltica 1
species Hirsutella rhossiliensis 1 1
species Histophilus somni 18 84 2 1
species Histoplasma capsulatum 1
species Hoeflea phototrophica 1
species Hoeflea sp. IMCC20628 7 1
species Holdemanella biformis 2514 686 7 2 14 3 1 6 3 1
species Holdemanella hominis 1
species Holdemanella porci 1 1
species Holdemanella sp. 1
species Holdemanella sp. DFI.5.21 1
species Holdemanella sp. DFI.5.55 1 1
species Holdemanella sp. MSK.7.32 1
species Holdemania filiformis 1092 550 12 22 8 5 7 4
species Holdemania massiliensis 517 3 1 8 4 2 1 1
species Holdemania sp. 1001095H_141210_F2 1 1
species Holdemania sp. 1001302B_160321_E10 1
species Holdemania sp. Marseille-P2844 5 1
species Hollowayvirus H66 1
species Holophaga foetida 11
species Holzapfeliella floricola 87
species Hominenteromicrobium mulieris 4
species Hominibacterium faecale 1
species Hominicoprocola fusiformis 4
species Hominifimenecus microfluidus 4
species Hominilimicola fabiformis 4
species Hominisplanchenecus faecis 4
species Hominiventricola filiformis 4
species Homo sapiens 220 1 1
species Hoppeia youngheungensis 1
species Hornefia porci 1
species Horticoccus luteus 2
species Howardella ureilytica 1111 107 2 2 2
species Hoylesella buccalis 1939 760 253 50 2 1 6 3 5 1 3
species Hoylesella enoeca 6 247 258 9 7 2
species Hoylesella loescheii 789 364 20 3 3 3
species Hoylesella marshii 16 181
species Hoylesella nanceiensis 23 337 2 1
species Hoylesella oralis 38 479
species Hoylesella pleuritidis 486 245 1
species Hoylesella saccharolytica 89 553 2 1 2
species Hoylesella shahii 514 127 1 6
species Hoylesella timonensis 1375 756 120 31 3 1 2 5 7 1
species Hoyosella subflava 40 22
species Hugenholtzia roseola 38 2
species Hujiaoplasma nucleasis 94
species Human endogenous retrovirus H 2
species Human endogenous retrovirus K 15
species Human gut gokushovirus 35 1
species human intestinal bacterium PUE 1
species Human papillomavirus 7
species Humibacter albus 42
species Humibacter ginsengisoli 1
species Humibacter ginsenosidimutans 14
species Humibacter sp. BT305 4
species Humidesulfovibrio arcticus 27
species Humidesulfovibrio idahonensis 77 327
species Humidesulfovibrio mexicanus 25
species Humisphaera borealis 1
species Hungatella effluvii 1283 1 5 9 3
species Hungatella hathewayi 1124 269 14 13 26 15 6 7 4 3 2 1 1
species Hungatella hominis 3
species Hungatella sp. L36 3
species Hutsoniella sourekii 257
species Hwangdonia seohaensis 20
species Hyalangium gracile 1
species Hyaloscypha bicolor 1
species Hydrocarboniclastica marina 16 2
species Hydrocarboniphaga daqingensis 3238 1
species Hydrocarboniphaga effusa 1
species Hydrogenibacillus schlegelii 178 2 1 2 1
species Hydrogenibacillus sp. N12 2
species Hydrogeniiclostridium mannosilyticum 1 2 1
species Hydrogenimonas urashimensis 2
species Hydrogenispora ethanolica 648
species Hydrogenoanaerobacterium saccharovorans 1245 2 4 1
species Hydrogenobacter thermophilus 3 2
species Hydrogenobaculum acidophilum 35 2 2 3
species Hydrogenobaculum sp. Y04AAS1 1 1
species Hydrogenophaga bisanensis 5
species Hydrogenophaga crassostreae 15
species Hydrogenophaga crocea 22
species Hydrogenophaga defluvii 12
species Hydrogenophaga intermedia 1
species Hydrogenophaga palleronii 24
species Hydrogenophaga pseudoflava 13 5
species Hydrogenophaga sp. BPS33 21 1
species Hydrogenophaga sp. BT04 1
species Hydrogenophaga sp. NH-16 20
species Hydrogenophaga sp. PAMC20947 14
species Hydrogenophaga sp. PBC 55 1 1
species Hydrogenophaga sp. PBL-H3 13 1
species Hydrogenophaga sp. RAC07 25 1 1
species Hydrogenophaga sp. SL48 1
species Hydrogenophaga taeniospiralis 4 2
species Hydrogenophilus halorhabdus 3
species Hydrogenophilus hirschii 26
species Hydrogenophilus islandicus 31 3
species Hydrogenophilus thermoluteolus 15
species Hydrogenothermus marinus 22
species Hydrogenovibrio crunogenus 4 7 1 2
species Hydrogenovibrio thermophilus 98 29
species Hydrotalea flava 4
species Hydrotalea sandarakina 25
species Hylemonella gracilis 1 25
species Hymenobacter aerilatus 1
species Hymenobacter arcticus 7
species Hymenobacter baengnokdamensis 49 1
species Hymenobacter busanensis 126 1
species Hymenobacter cellulosilyticus 1
species Hymenobacter cellulosivorans 2
species Hymenobacter chitinivorans 25
species Hymenobacter daecheongensis 29
species Hymenobacter edaphi 1
species Hymenobacter gelipurpurascens 13
species Hymenobacter jejuensis 63 2
species Hymenobacter luteus 15
species Hymenobacter metalli 10
species Hymenobacter monticola 1
species Hymenobacter nivis 116 1 1
species Hymenobacter norwichensis 1 1
species Hymenobacter ocellatus 3
species Hymenobacter oligotrophus 122 1
species Hymenobacter psoromatis 114 4 2
species Hymenobacter psychrotolerans 1
species Hymenobacter qilianensis 1 1
species Hymenobacter radiodurans 29 1
species Hymenobacter ruber 1
species Hymenobacter saemangeumensis 2
species Hymenobacter sedentarius 138 1 1
species Hymenobacter sediminicola 1
species Hymenobacter sp. 5317J-9 1 2
species Hymenobacter sp. APR13 132 1
species Hymenobacter sp. BRD128 69 1 2
species Hymenobacter sp. BRD67 43 1
species Hymenobacter sp. BT18 87 1
species Hymenobacter sp. DG01 83 2
species Hymenobacter sp. DG25A 43 3
species Hymenobacter sp. DG25B 92 1 1
species Hymenobacter sp. HDW8 5
species Hymenobacter sp. NBH84 1 1
species Hymenobacter sp. PAMC 26628 148 2 1
species Hymenobacter swuensis 77 1 1
species Hymenobacter taeanensis 54
species Hymenobacter tibetensis 1 1
species Hymenobacter volaticus 1 1
species Hymenobacter xinjiangensis 2706 1
species Hymenobacter yonginensis 1
species Hymenolepis microstoma 1
species Hymenoptera sp. BOLD:AAB2902 1
species Hypericibacter adhaerens 45 2
species Hypericibacter terrae 26 1
species Hyphobacterium sp. CCMP332 1
species Hyphococcus flavus 2
species Hyphomicrobium aestuarii 605 4
species Hyphomicrobium chloromethanicum 1
species Hyphomicrobium denitrificans 92 3 2
species Hyphomicrobium hollandicum 1
species Hyphomicrobium nitrativorans 29 1 1
species Hyphomicrobium sp. ghe19 15
species Hyphomicrobium sp. MC1 12 1
species Hyphomicrobium sulfonivorans 4 19
species Hyphomicrobium vulgare 22
species Hyphomicrobium zavarzinii 3
species Hyphomonas hirschiana 11
species Hyphomonas neptunium 12 1
species Hyphomonas oceanitis 69 3 1
species Hyphomonas polymorpha 1
species Hyphomonas sp. CACIAM 19H1 21
species Hyphomonas sp. KY3 1
species Hyphomonas sp. Mor2 3 1
species Hyphomonas taiwanensis 1
species Hyphopichia pseudoburtonii 1
species Iamia majanohamensis 5 2
species Iamia sp. SCSIO 61187 2
species Ichthyobacterium seriolicida 1
species Ichthyophthirius multifiliis 1
species Ideonella azotifigens 1
species Ideonella dechloratans 1 1 2
species Idiomarina loihiensis 1
species Idiomarina piscisalsi 1
species Idiomarina sp. OT37-5b 1 1
species Idiomarina sp. X4 1
species Idiomarina zobellii 1
species Ignatzschineria rhizosphaerae 1
species Ignavibacteria bacterium 2
species Ignavibacteriota bacterium 65 1
species Ignavibacterium album 46 60 1 1 2
species Ignavigranum ruoffiae 98 2 2
species Ihubacter massiliensis 2 4 8 1
species Ilumatobacter coccineus 85 8 2
species Ilyobacter polytropus 105 5 2
species Ilyomonas limi 1
species Immersiporthe knoxdaviesiana 1
species Immundisolibacter cernigliae 33 3 2
species Impatiophila furcatosternata 4
species Impatiophila longifolia 3
species Impatiophila menba 1
species Impatiophila motuoensis 3
species Impatiophila truncivalva 3
species Imperialibacter roseus 29
species Imtechella halotolerans 3 1 2
species Indibacter alkaliphilus 46 1
species Indioceanicola profundi 53 2 2
species Inhella inkyongensis 38 2
species Inoviridae sp. 12 12
species Inquilinus ginsengisoli 27
species Insolitispirillum peregrinum 2902 288
species Intestinibacillus massiliensis 4 4
species Intestinibacillus sp. Marseille-P6563 1
species Intestinibacter bartlettii 1165 6 18 20 1 9 9 3
species Intestinibaculum porci 266 1 6 3
species Intestinimonas aquisgranensis 1
species Intestinimonas butyriciproducens 1476 205 270 17 9 25 18 9 9 4 3 1 1
species Intestinimonas gabonensis 1 17 4 1
species Intestinimonas massiliensis (ex Afouda et al. 2020) 9 2 6 1 5 4 1 1
species Intestinimonas sp. FSAA-17 11
species Intestinimonas sp. MSJ-38 1 1
species Intestinimonas sp. UBA1698 1 3
species Intestinimonas timonensis 1 1 12 7 6 1 1
species Intrasporangium calvum 10
species Intrasporangium chromatireducens 3
species Iocasia fonsfrigidae 3
species Iodobacter arcticus 1
species Iodobacter ciconiae 9 3 2
species Iodobacter fluviatilis 1
species iron-reducing bacterium enrichment culture clone FeC_1_A3 1
species Isoalcanivorax indicus 562
species Isoalcanivorax pacificus 3 74 1 1
species Isobaculum melis 1
species Isochromatium buderi 8
species Isoptericola dokdonensis 15
species Isoptericola variabilis 13 2
species Isosphaera pallida 16 2
species Ithacavirus SP058 1
species Ithacavirus SP076 1
species Jahgtovirus intestinihominis 8 1
species Jahnella thaxteri 4
species Jaminaea rosea 1
species Janibacter anophelis 1
species Janibacter indicus 29
species Janibacter limosus 22 1
species Janibacter melonis 20
species Janibacter sanguinis 1
species Janibacter sp. YB324 2
species Jannaschia donghaensis 1
species Jannaschia seohaensis 3
species Jannaschia seosinensis 3
species Jannaschia sp. CCS1 1 1 1
species Janthinobacterium agaricidamnosum 108 48 4 3 2
species Janthinobacterium lividum 23 10
species Janthinobacterium sp. 1_2014MBL_MicDiv 1
species Janthinobacterium sp. 17J80-10 28 1 1
species Janthinobacterium sp. B9-8 1
species Janthinobacterium sp. LM6 5 4
species Janthinobacterium sp. Marseille 5 1
species Janthinobacterium svalbardensis 6
species Janthinobacterium tructae 3
species Jatrophihabitans fulvus 4
species Jatrophihabitans sp. GAS493 15
species Jatrophihabitans telluris 2
species Jejubacter calystegiae 107 2
species Jeongeupia sp. HS-3 1
species Jeongeupia sp. USM3 44 2 1
species Jeotgalibaca arthritidis 42 1 2
species Jeotgalibaca ciconiae 54 3 2
species Jeotgalibaca dankookensis 42 1 3 2
species Jeotgalibaca porci 84 1 2
species Jeotgalibaca sp. MA1X17-3 1 2
species Jeotgalibaca sp. PTS2502 3 3 1
species Jeotgalibacillus malaysiensis 141 1 2
species Jeotgalicoccus coquinae 30
species Jeotgalicoccus halotolerans 5
species Jeotgalicoccus psychrophilus 3
species Jeotgalicoccus sp. ATCC 8456 2
species Jeotgalicoccus sp. M3T9B12 1
species Jeotgalicoccus sp. WY2 1
species Jhaorihella thermophila 1
species Jiangella alba 1
species Jiangella alkaliphila 17
species Jiangella ginsengisoli 55 1
species Jiangella sp. DSM 45060 14 4
species Jiaodavirus jd18 1
species Jiaodavirus pko111 1
species Jingyaoa shaoxingensis 3
species Johnsonella ignava 4545 1149 1 12 7
species Jonesia denitrificans 84 17 2
species Jonesia quinghaiensis 100 46
species Jonquetella anthropi 213 6 1 1 1
species Jonquetella sp. BV3C4 4
species Juglans regia 1
species Jutongia hominis 2
species Kaistella antarctica 1 1 2
species Kaistella carnis 3 2
species Kaistella daneshvariae 5 2
species Kaistella haifensis 9 1
species Kaistella jeonii 2
species Kaistella polysaccharea 1
species Kaistella sp. 97-N-M2 2
species Kaistia adipata 3 3
species Kaistia granuli 2
species Kaistia soli 8
species Kaistia sp. 32K 1
species Kallipyga gabonensis 1
species Kallipyga massiliensis 107 1
species Kallotenue papyrolyticum 31
species Kalmanozyma brasiliensis 1
species Kamptonema sp. PCC 6506 1
species Kandleria vitulina 185 2
species Kangiella geojedonensis 2
species Kangiella koreensis 1 1
species Kangiella marina 7
species Kangiella profundi 6 1
species Kangiella sediminilitoris 12 2
species Karlodinium veneficum 1
species Kastovskya adunca 13
species Kaustia mangrovi 1
species Kazachstania africana 8
species KCTC 49343 19
species Kehishuvirus primarius 4
species Keratinibaculum paraultunense 31 1 2
species Kerstersia gyiorum 1 1
species Ketobacter alkanivorans 39 1 1
species Ketogulonicigenium robustum 26 1
species Ketogulonicigenium vulgare 13 1 1
species Kibdelosporangium phytohabitans 27 2
species Kibdelosporangium sp. MJ126-NF4 22
species Kiloniella laminariae 64
species Kineobactrum salinum 67 1
species Kineococcus aurantiacus 1 11
species Kineococcus glutinatus 6
species Kineococcus gynurae 8
species Kineococcus radiotolerans 5 17 1 2
species Kineosporia babensis 3
species Kineosporia mesophila 1
species Kineosporia mikuniensis 18
species Kineosporia rhizophila 13
species Kineothrix alysoides 1
species Kingella kingae 1 1 1
species Kingella oralis 29 2 2 20 2
species Kingella potus 2 1
species Kiritimatiella glycovorans 58 1 2
species Kitasatospora arboriphila 1
species Kitasatospora cheerisanensis 1
species Kitasatospora cinereorecta 1
species Kitasatospora melanogena 6 1
species Kitasatospora niigatensis 13
species Kitasatospora putterlickiae 4
species Kitasatospora setae 1 2 6 3
species Kitasatospora sp. MMS16-BH015 16 2 1
species Kitasatospora sp. NA04385 1 2
species Kitasatospora sp. YST-16 1
species Klebsiella aerogenes 78 249 5 12 2
species Klebsiella electrica 27 2
species Klebsiella granulomatis 16 1
species Klebsiella grimontii 51 1 1
species Klebsiella huaxiensis 47 1 2
species Klebsiella michiganensis 110 9 3 15 2 1
species Klebsiella oxytoca 765 7 6 174 9 3 4 13 2 3 2
species Klebsiella phage 117 1
species Klebsiella phage 5 LV-2017 1
species Klebsiella phage CX1 2
species Klebsiella phage KMI13 1
species Klebsiella phage KMI2 1
species Klebsiella phage KMI4 1
species Klebsiella phage KPN3 1
species Klebsiella phage KPN6 1
species Klebsiella phage KPR2 2
species Klebsiella phage Kund-ULIP47 1
species Klebsiella phage Kund-ULIP54 1
species Klebsiella phage P509 1
species Klebsiella phage phiKO2 1 1
species Klebsiella phage SH-KP152226 1
species Klebsiella phage ST13-OXA48phi12.5 2
species Klebsiella phage ST512-KPC3phi13.3 1
species Klebsiella phage ST846-OXA48phi9.2 1
species Klebsiella phage ST899-OXA48phi17.2 1
species Klebsiella pneumoniae 397 14 9 262 24 3 8 30 9 19 2 5 3 2 1 1
species Klebsiella quasipneumoniae 117 2 1 1 2
species Klebsiella quasivariicola 14
species Klebsiella sp. 2812/50 1
species Klebsiella sp. 4349 1
species Klebsiella sp. 636/52 1
species Klebsiella sp. B12 134
species Klebsiella sp. CTHL.F3a 1
species Klebsiella sp. E-Nf3 1
species Klebsiella sp. FDAARGOS_511 1
species Klebsiella sp. Kd70 TUC-EEAOC 1
species Klebsiella sp. LTGPAF-6F 3
species Klebsiella sp. LY 8
species Klebsiella sp. M5al 9 1
species Klebsiella sp. MPUS7 8
species Klebsiella sp. NK33-98-8 1
species Klebsiella sp. NT18-21 3
species Klebsiella sp. OBRC7 1
species Klebsiella sp. P1927 1
species Klebsiella sp. P1CD1 19
species Klebsiella sp. PO552 13
species Klebsiella sp. SOR89 3
species Klebsiella sp. T17-2 1
species Klebsiella sp. WP3-S18-ESBL-05 8
species Klebsiella sp. WP3-W18-ESBL-02 5
species Klebsiella sp. WP4-W18-ESBL-05 7
species Klebsiella sp. WP8-S18-ESBL-06 9
species Klebsiella variicola 11 70 83 5 1 1 2 2 2
species Klebsiella virus 2019KP1 2
species Klebsiella virus KpV2883 2
species Klebsiella virus NJS2 2
species Kluyvera ascorbata 30 2 4 3 1
species Kluyvera cryocrescens 1 2
species Kluyvera georgiana 3 535 60 1 6
species Kluyvera intermedia 74 2
species Kluyvera sp. CRP 1
species Kluyvera sp. SR5.1 3
species Kluyveromyces lactis 8
species Kluyveromyces marxianus 1 8
species Knoellia aerolata 1
species Knoellia subterranea 1
species Kocuria assamensis 11
species Kocuria flava 34
species Kocuria gwangalliensis 16
species Kocuria himachalensis 6
species Kocuria indica 12
species Kocuria marina 10
species Kocuria palustris 7 46 2
species Kocuria rhizophila 10 4 9 1
species Kocuria rosea 56 59 1
species Kocuria sp. BT304 6
species Kocuria sp. F38 1
species Kocuria sp. HSID17590 1
species Kocuria sp. KD4 13 1
species Kocuria sp. TGY1127_2 1
species Kocuria turfanensis 40
species Kocuria varians 1 74 1
species Kofleria flava 4
species Koleobacter methoxysyntrophicus 2
species Komagataeibacter europaeus 45 5
species Komagataeibacter kakiaceti 4
species Komagataeibacter medellinensis 3
species Komagataeibacter nataicola 2 2
species Komagataeibacter oboediens 2 1 1
species Komagataeibacter rhaeticus 1
species Komagataeibacter saccharivorans 23 2 1
species Komagataeibacter xylinus 125 1
species Komvophoron kgarii 1
species Kordia antarctica 1 1
species Kordia jejudonensis 1
species Kordia sp. SMS9 1
species Kordiimonas aestuarii 1
species Kordiimonas pumila 2
species Kordiimonas sp. SCSIO 12603 2
species Kosakonia arachidis 43 1 1
species Kosakonia cowanii 224 68 2
species Kosakonia oryzae 24 1
species Kosakonia oryzendophytica 1 1
species Kosakonia radicincitans 47 1 1
species Kosakonia sacchari 36 2 1
species Kosakonia sp. CCTCC M2018092 19
species Kosakonia sp. MUSA4 23
species Kosakonia sp. SMBL-WEM22 1
species Kosmotoga arenicorallina 38
species Kosmotoga olearia 2
species Kosmotoga pacifica 2
species Kouleothrix aurantiaca 1
species Kovacikia minuta 2
species Kozakia baliensis 1 11 2 1
species Kribbella amoyensis 1
species Kribbella flavida 16 1 2
species Kribbella ginsengisoli 20 5
species Kribbella koreensis 1
species Kribbella qitaiheensis 2
species Kribbella sancticallisti 3
species Kribbella yunnanensis 6 256
species Kriegella aquimaris 1 1
species Kroppenstedtia eburnea 158 2
species Kroppenstedtia guangzhouensis 4 1
species Kroppenstedtia pulmonis 23 2
species Ktedonobacter racemifer 1
species Ktedonospora formicarum 1
species Ktedonosporobacter rubrisoli 35 1 2
species Kurthia gibsonii 6
species Kurthia sp. 11kri321 43 3 1
species Kurthia zopfii 1 8 2
species Kushneria aurantia 80 6
species Kushneria indalinina 36
species Kushneria konosiri 16
species Kushneria marisflavi 19
species Kushneria pakistanensis 2
species Kushneria phosphatilytica 14 2
species Kushneria sinocarnis 3
species Kuttervirus STML131 1
species Kutzneria albida 28 1 2
species Kutzneria chonburiensis 2
species Kutzneria sp. CA-103260 1
species Kwaitsingvirus HK544 1
species Kwoniella shandongensis 1
species Kyrpidia spormannii 13 1 2
species Kyrpidia tusciae 191 1 2
species Kytococcus schroeteri 1 1 2
species Kytococcus sedentarius 65 1 1
species Labilibacter marinus 3
species Labilibaculum antarcticum 201 1 4 3
species Labilithrix luteola 49 63 2
species Labrenzia sp. PHM005 27 1
species Labrenzia sp. THAF82 21 1 1
species Labrenzia sp. VG12 13 1 2 1
species Labrys neptuniae 40
species Labrys sp. KNU-23 2
species Labrys wisconsinensis 1
species Laceyella putida 45 7
species Laceyella sacchari 12 2
species Lachancea kluyveri 1
species Lachnoanaerobaculum cf. saburreum oral strain C27KA 1
species Lachnoanaerobaculum gingivalis 1 3
species Lachnoanaerobaculum orale 194 1
species Lachnoanaerobaculum saburreum 52 8 1 1 1 1
species Lachnoanaerobaculum sp. 1
species Lachnoanaerobaculum sp. OBRC5-5 9 5
species Lachnoanaerobaculum sp. S6-P3 1
species Lachnoanaerobaculum umeaense 1390 269 2 5 5 3 1
species Lachnobacterium bovis 1155 3 17 8 1
species Lachnobacterium sp. 4
species Lachnobacterium sp. G9 1 1
species Lachnoclostridium edouardi 1 7 1
species Lachnoclostridium phocaeense 1 272 1 5 3 5 3 1
species Lachnoclostridium phytofermentans 668 269 2 5 6 3
species Lachnoclostridium sp. 1 4
species Lachnoclostridium sp. 210928-DFI.6.3 4 1
species Lachnoclostridium sp. An118 1
species Lachnoclostridium sp. An131 1 1
species Lachnoclostridium sp. An138 1 1 1
species Lachnoclostridium sp. An14 1
species Lachnoclostridium sp. An169 1 1
species Lachnoclostridium sp. An196 1 1
species Lachnoclostridium sp. Marseille-P6806 1 1
species Lachnoclostridium sp. MSJ-17 1
species Lachnoclostridium sp. UBA2905 1
species Lachnoclostridium sp. YL32 274 4
species Lachnospira eligens 1493 2 276 25 27 29 30 9 13 1 4 3 1
species Lachnospira hominis (ex Liu et al. 2021) 3 1
species Lachnospira multipara 508 85 4 15 5 1
species Lachnospira pectinoschiza 4639 1353 505 2 10 28 8 7 7 4 4 1 1
species Lachnospira sp. 2 4
species Lachnospira sp. UBA4290 4
species Lachnospiraceae bacterium 277 6 1 18 5 4
species Lachnospiraceae bacterium 1_1_57FAA 2 7 4
species Lachnospiraceae bacterium 1_4_56FAA 1 18 2
species Lachnospiraceae bacterium 1001713B170207_170306_A9 2
species Lachnospiraceae bacterium 2_1_46FAA 4 9
species Lachnospiraceae bacterium 2_1_58FAA 6 17 2
species Lachnospiraceae bacterium 210521-DFI.1.105 4
species Lachnospiraceae bacterium 210521-DFI.1.109 2
species Lachnospiraceae bacterium 210521-DFI.3.101 4
species Lachnospiraceae bacterium 210521-DFI.3.107 4
species Lachnospiraceae bacterium 210521-DFI.4.71 4
species Lachnospiraceae bacterium 210521-DFI.5.19 4
species Lachnospiraceae bacterium 210521-DFI.5.20 4
species Lachnospiraceae bacterium 3_1_46FAA 4 19 4
species Lachnospiraceae bacterium 3_1_57FAA_CT1 11 4
species Lachnospiraceae bacterium 3-1 1
species Lachnospiraceae bacterium 5_1_57FAA 11
species Lachnospiraceae bacterium 5_1_63FAA 6 29 4
species Lachnospiraceae bacterium 6_1_37FAA 4 14
species Lachnospiraceae bacterium 6_1_63FAA 4 13
species Lachnospiraceae bacterium 7_1_58FAA 1 27 4
species Lachnospiraceae bacterium 8_1_57FAA 29 3 2 8 1 4
species Lachnospiraceae bacterium 9_1_43BFAA 4 10
species Lachnospiraceae bacterium A2 3
species Lachnospiraceae bacterium AC2012 1
species Lachnospiraceae bacterium AM10-38 6 10 4
species Lachnospiraceae bacterium AM21-21 6 11 4
species Lachnospiraceae bacterium AM23-2LB 3 2
species Lachnospiraceae bacterium AM23-7LB 3 6 4
species Lachnospiraceae bacterium AM25-17 1
species Lachnospiraceae bacterium AM25-27 6 9 4
species Lachnospiraceae bacterium AM26-1LB 6 11 4
species Lachnospiraceae bacterium AM40-2BH 4 2
species Lachnospiraceae bacterium AM48-27BH 1 5 4
species Lachnospiraceae bacterium AT6 1
species Lachnospiraceae bacterium CAG:215 2
species Lachnospiraceae bacterium CAG:25 4
species Lachnospiraceae bacterium Choco86 275 10 5 19 4
species Lachnospiraceae bacterium DJF_RR61 1
species Lachnospiraceae bacterium DJF_VP18k1 1
species Lachnospiraceae bacterium DW70 1
species Lachnospiraceae bacterium GAM79 277 12 8 28 4
species Lachnospiraceae bacterium KGMB03038 2 1
species Lachnospiraceae bacterium KHCPX20 1
species Lachnospiraceae bacterium KM106-2 268 1 1
species Lachnospiraceae bacterium Marseille-Q4251 4
species Lachnospiraceae bacterium MC_36 1
species Lachnospiraceae bacterium MD308 3
species Lachnospiraceae bacterium MD335 3
species Lachnospiraceae bacterium NC2004 3
species Lachnospiraceae bacterium NK4A136 6
species Lachnospiraceae bacterium NLAE-zl-G231 2 4
species Lachnospiraceae bacterium NSJ-171 3
species Lachnospiraceae bacterium OF09-33XD 1 8 4
species Lachnospiraceae bacterium OF09-6 3 9 3
species Lachnospiraceae bacterium OF11-28 3 7 4
species Lachnospiraceae bacterium OM02-26 6 9 4
species Lachnospiraceae bacterium OM02-3 1 4
species Lachnospiraceae bacterium OM02-31 4
species Lachnospiraceae bacterium OM04-12BH 9 4
species Lachnospiraceae bacterium oral taxon 082 1
species Lachnospiraceae bacterium oral taxon 096 1 1 1
species Lachnospiraceae bacterium oral taxon 500 268 1 2 4
species Lachnospiraceae bacterium TF09-5 5 4
species Lachnospiraceae bacterium TF10-8AT 6 8 4
species Lachnospiraceae bacterium TM07-2AC 2 10 2
species Lachnospiraceae bacterium UBA1683 1
species Lachnospiraceae bacterium UBA1689 1 1
species Lachnospiraceae bacterium UBA5895 1
species Lachnospiraceae bacterium UBA7199 1
species Lachnospiraceae bacterium UBA7272 1 3
species Lachnospiraceae bacterium UBA7294 1 3
species Lachnospiraceae bacterium UBA7598 1
species Lachnospiraceae bacterium VE202-12 4 4
species Lachnospiraceae bacterium VE202-23 3 4
species Lachnotalea sp. AF33-28 8 3 1
species Lacibacter cauensis 1
species Lacibacter sediminis 2
species Lacibacterium aquatile 135
species Lacihabitans soyangensis 6
species Lacimicrobium alkaliphilum 48 1
species Lacinutrix copepodicola 1
species Lacinutrix iliipiscaria 1
species Lacinutrix sp. 5H-3-7-4 1 1
species Lacinutrix sp. Bg11-31 1
species Lacinutrix sp. WUR7 2
species Lacinutrix venerupis 3
species Lacipirellula limnantheis 3
species Lacipirellula parvula 36 1
species Lacnuvirus LcNu 1
species Lacrimispora aerotolerans 257 18 1
species Lacrimispora algidixylanolytica 1
species Lacrimispora amygdalina 1 4 1
species Lacrimispora celerecrescens 5 1 4 1
species Lacrimispora indolis 1 5
species Lacrimispora saccharolytica 294 1 274 21 31 15 11 1 1 4 3 1
species Lacrimispora sp. 210928-DFI.3.58 1
species Lacrimispora sphenoides 228 269 11 31
species Lacrimispora xylanisolvens 896 2 3 1
species Lacrimispora xylanolytica 1 4 2 3
species Lacticaseibacillus brantae 301 29 1
species Lacticaseibacillus camelliae 55 1
species Lacticaseibacillus casei 355 7 2 92 6 1 3 1 1 1
species Lacticaseibacillus chiayiensis 1
species Lacticaseibacillus jixianensis 1
species Lacticaseibacillus manihotivorans 341 44 35 1
species Lacticaseibacillus nasuensis 28
species Lacticaseibacillus pantheris 34 15
species Lacticaseibacillus paracasei 300 89 180 2 3 2 11 4 1 1 2
species Lacticaseibacillus rhamnosus 565 2 57 164 6 1 8 2 5 9 2 1 3 1
species Lacticaseibacillus songhuajiangensis 25
species Lacticaseibacillus thailandensis 91 5
species Lacticaseibacillus zeae 165 1 1 1 1
species Lactiplantibacillus fabifermentans 85
species Lactiplantibacillus mudanjiangensis 1
species Lactiplantibacillus paraplantarum 67 28 1 1 1
species Lactiplantibacillus pentosus 322 20 1 2 1
species Lactiplantibacillus plajomi 14
species Lactiplantibacillus plantarum 501 12 65 264 13 11 22 5 1 4 3
species Lactivibrio alcoholicus 2
species Lactobacillaceae bacterium 1
species Lactobacillus acetotolerans 1 37 20 1 2
species Lactobacillus acidophilus 285 7 12 141 10 3 2 13 6 1 1 2 1
species Lactobacillus amylolyticus 8 8 25 2 2
species Lactobacillus amylovorus 87 1 2
species Lactobacillus apis 27 43 4 1
species Lactobacillus casei subsp. casei ATCC 393 1
species Lactobacillus crispatus 442 142 183 4 1 1 2
species Lactobacillus delbrueckii 264 121 61 237 11 2 4 17 2 1 2 1
species Lactobacillus equicursoris 127 3
species Lactobacillus faeni 19
species Lactobacillus fornicalis 5
species Lactobacillus gallinarum 204 17 1 1
species Lactobacillus gasseri 25 55 97 2 3 1 3 2
species Lactobacillus gigeriorum 51 22
species Lactobacillus guizhouensis 31
species Lactobacillus hamsteri 12 29
species Lactobacillus helsingborgensis 1
species Lactobacillus helveticus 100 83 9 116 10 1 12 1 2 1
species Lactobacillus iners 285 444 54 247 1 1 1 2 2 1
species Lactobacillus intermedius 223 1
species Lactobacillus intestinalis 72 32 1 1
species Lactobacillus japonicus 445
species Lactobacillus jensenii 94 34 155 1 1 2
species Lactobacillus johnsonii 109 11 7 207 1 3 2
species Lactobacillus kalixensis 14 15
species Lactobacillus kefiranofaciens 46 108 5 27 2
species Lactobacillus kitasatonis 45 11
species Lactobacillus kullabergensis 3 1 2
species Lactobacillus leichmannii 5
species Lactobacillus letivazi 166
species Lactobacillus panisapium 2
species Lactobacillus paragasseri 44 1 1
species Lactobacillus pasteurii 71
species Lactobacillus phage Bassarid 5
species Lactobacillus phage KC5a 5
species Lactobacillus phage Lv-1 6
species Lactobacillus phage phi jlb1 1
species Lactobacillus phage phiadh 3
species Lactobacillus phage phiEF-1.1 1
species Lactobacillus phage Sabazios 5
species Lactobacillus phage Silenus 5
species Lactobacillus prophage Lj771 5
species Lactobacillus psittaci 29
species Lactobacillus rodentium 61
species Lactobacillus selangorensis 44
species Lactobacillus sp. 6 1 1
species Lactobacillus sp. 3B(2020) 17 2
species Lactobacillus sp. 7_1_47FAA 8
species Lactobacillus sp. Akhmro1 1
species Lactobacillus sp. ATCC 15578 1
species Lactobacillus sp. BL302 1 8
species Lactobacillus sp. C30An8 2 1
species Lactobacillus sp. C4I1 7
species Lactobacillus sp. C4I18 1
species Lactobacillus sp. CBA3605 1 1
species Lactobacillus sp. CBA3606 3 1
species Lactobacillus sp. CR-609S 38
species Lactobacillus sp. D1501 1
species Lactobacillus sp. DS1_6 1
species Lactobacillus sp. DS13_6 1
species Lactobacillus sp. DS15_6 1
species Lactobacillus sp. DS18_6 1
species Lactobacillus sp. DS2_6 1
species Lactobacillus sp. DS22_6 1
species Lactobacillus sp. DS3_6 1
species Lactobacillus sp. DS9_6 1
species Lactobacillus sp. ESL0785 1 1
species Lactobacillus sp. H7_2_4MCO2 3
species Lactobacillus sp. H7_6_6MCO2 1
species Lactobacillus sp. HMSC056D05 1
species Lactobacillus sp. HMSC061B07 1
species Lactobacillus sp. HMSC064F12 1
species Lactobacillus sp. HMSC066G01 1
species Lactobacillus sp. HMSC068B07 1
species Lactobacillus sp. HMSC072E07 1
species Lactobacillus sp. HMSC073B09 1
species Lactobacillus sp. HMSC073D04 1
species Lactobacillus sp. HMSC075D02 1
species Lactobacillus sp. HMSC077C11 1
species Lactobacillus sp. HMSC078F07 1
species Lactobacillus sp. HMSC17G08 1
species Lactobacillus sp. HMSC25A02 1
species Lactobacillus sp. JM1 9
species Lactobacillus sp. Koumiss 8
species Lactobacillus sp. L.sR5 1
species Lactobacillus sp. MYMRS/TEN2 2
species Lactobacillus sp. N15.MGS-260 1
species Lactobacillus sp. NRCT-KU 1 2
species Lactobacillus sp. PV034 1
species Lactobacillus sp. S16 3
species Lactobacillus sp. T059 1
species Lactobacillus sp. TAB-22 2
species Lactobacillus sp. TAB-26 1 12
species Lactobacillus sp. TAB-29 2
species Lactobacillus sp. TAB-30 10
species Lactobacillus sp. UMNPBX1 1
species Lactobacillus sp. UMNPBX11 1
species Lactobacillus sp. UMNPBX12 1
species Lactobacillus sp. UMNPBX15 1
species Lactobacillus sp. UMNPBX16 1
species Lactobacillus sp. UMNPBX2 1
species Lactobacillus sp. UMNPBX8 1
species Lactobacillus sp. UMNPBX9 1
species Lactobacillus taiwanensis 460 1 1
species Lactobacillus terrae 40 1 2
species Lactobacillus ultunensis 220 1 1 1 2
species Lactococcus allomyrinae 8 4 2
species Lactococcus carnosus 30
species Lactococcus cremoris 63 4 2 6 4 3
species Lactococcus formosensis 2
species Lactococcus fujiensis 924 10
species Lactococcus garvieae 114 1 95 8 1 25 1 2
species Lactococcus hircilactis 1
species Lactococcus lactis 898 1 211 275 10 3 9 32 4 4 3
species Lactococcus laudensis 2
species Lactococcus paracarnosus 25 1
species Lactococcus petauri 7 1 1
species Lactococcus phage 53801 1
species Lactococcus phage 63301 1
species Lactococcus phage C41431 3
species Lactococcus phage CHL92 1
species Lactococcus phage Dub35A 2
species Lactococcus phage phi31 3
species Lactococcus phage TP901-1 3
species Lactococcus phage TPW22 3
species Lactococcus phage Tuc2009 1
species Lactococcus piscium 3 38 3 1
species Lactococcus protaetiae 2 1
species Lactococcus raffinolactis 81 9 135 1 2 2
species Lactococcus sp. D2 1
species Lactococcus sp. EKM101L 2
species Lactococcus sp. EKM102L 2
species Lactococcus sp. EKM106P 2
species Lactococcus sp. EKM201L 2
species Lactococcus sp. EKM203L 2
species Lactococcus sp. EKM501L 2
species Lactococcus sp. EKM502L 2
species Lactococcus sp. MH5-2 1 38
species Lactococcus sp. NH2-7C 2
species Lactococcus sp. S47 2
species Lactococcus sp. S64 2
species Lactococcus sp. SK2-659 2
species Lactococcus sp. STM1 6
species Lactococcus sp. STM31 2
species Lactococcus sp. TP1MJ 12
species Lactococcus sp. TP2MJ 3
species Lactococcus taiwanensis 2
species Lactonifactor longoviformis 1088 310 4 5 9 1 7
species Lactovum miscens 408
species Lactuca sativa 1
species Lacunisphaera limnophila 86 2 2
species Lagaffevirus lagaffe 1
species Lagierella massiliensis 1
species Lampropedia hyalina 1
species Lancefieldella parvula 162 142 2 22 2 5 1 1 2
species Lancefieldella rimae 76 42 2 1
species Lancefieldella sp. Marseille-Q7238 1 2
species Lapidilactobacillus dextrinicus 4 10 2
species Laribacter hongkongensis 4 151 2 2
species Larkinella insperata 1 2
species Larsenimonas salina 1
species Lasiodiplodia theobromae 1
species Latilactobacillus curvatus 33 89 2
species Latilactobacillus fuchuensis 14
species Latilactobacillus graminis 1
species Latilactobacillus sakei 10 4 15 2
species Lautropia mirabilis 227 62 202 1 2
species Lautropia sp. TeTO 8
species Lawsonella clevelandensis 240 1 2 3 2
species Lawsonia intracellularis 39 662 117 2 1 3
species Lawsonibacter asaccharolyticus 3 6 10 2 5 4 1
species Lawsonibacter hominis 2 1
species Lawsonibacter sp. 4
species Lawsonibacter sp. DFI.5.51 4
species Lawsonibacter sp. DFI.6.74 4
species Leadbettera azotonutricia 149 1 1 2 1
species Leadbetterella byssophila 14 33 3 2
species Lebetimonas acidiphila 38
species Leclercia adecarboxylata 143 1 2
species Leclercia pneumoniae 1
species Leclercia sp. 119287 11
species Leclercia sp. 29361 41
species Leclercia sp. G3L 1
species Leclercia sp. J807 19
species Leclercia sp. LSNIH1 11
species Leclercia sp. W17 20 1
species Leclercia sp. W6 10
species Lederbergia lenta 3 16 1 2
species Leeuwenhoekiella aequorea 1
species Leeuwenhoekiella nanhaiensis 1
species Leeuwenhoekiella sp. ZYFB001 9
species Legionella adelaidensis 6
species Legionella antarctica 1 1
species Legionella beliardensis 10
species Legionella cardiaca 1
species Legionella drozanskii 5
species Legionella fallonii 5 1 1
species Legionella geestiana 16 24 1
species Legionella gresilensis 6
species Legionella hackeliae 2
species Legionella impletisoli 5
species Legionella israelensis 1 2
species Legionella jordanis 6
species Legionella lansingensis 25 1
species Legionella longbeachae 1
species Legionella micdadei 1
species Legionella oakridgensis 1 1 1
species Legionella pneumophila 8 16 4 2
species Legionella rowbothamii 2
species Legionella sainthelensi 1
species Legionella shakespearei 1075
species Legionella sp. PC1000 1 1
species Legionella spiritensis 1
species Legionella taurinensis 1
species Legionella tucsonensis 1
species Legionella waltersii 4 3
species Leifsonia aquatica 3
species Leifsonia psychrotolerans 1
species Leifsonia shinshuensis 1
species Leifsonia soli 1
species Leifsonia sp. 21MFCrub1.1 6
species Leifsonia sp. PS1209 10
species Leifsonia xyli 106 2
species Leishmania amazonensis 1
species Leishmania braziliensis 1
species Leishmania donovani 1
species Leishmania infantum 1
species Leishmania major 1
species Leishmania panamensis 1
species Leishmania peruviana 1
species Leisingera aquaemixtae 23 1
species Leisingera caerulea 1
species Leisingera methylohalidivorans 2 1
species Leisingera sp. NJS201 1
species Leisingera sp. NJS204 1
species Leisingera thetidis 1 2
species Lelliottia amnigena 1471 2 74 3 2 2
species Lelliottia jeotgali 47
species Lelliottia nimipressuralis 2 17 1
species Lelliottia sp. WB101 22 1 1
species Leminorella grimontii 4
species Leminorella richardii 24 2
species Lentibacillus amyloliquefaciens 14 1 2
species Lentibacillus daqui 1 2
species Lentibacillus garicola 2
species Lentibacillus jeotgali 6
species Lentibacillus kapialis 15
species Lentibacillus salarius 7
species Lentibacillus salicampi 1
species Lentibacillus salinarum 822 1
species Lentibacillus sp. CBA3610 27 1 2
species Lentihominibacter faecis 4
species Lentihominibacter hominis 1
species Lentilactobacillus buchneri 2 63 6 11 2
species Lentilactobacillus curieae 6 2
species Lentilactobacillus hilgardii 13 9 11 2
species Lentilactobacillus kefiri 23 13 9 5 1
species Lentilactobacillus laojiaonis 1
species Lentilactobacillus otakiensis 19 1
species Lentilactobacillus parabuchneri 13 5 18 9 1 10 2
species Lentilactobacillus parafarraginis 2
species Lentilactobacillus parakefiri 229 1
species Lentilactobacillus rapi 3
species Lentilitoribacter sp. Alg239-R112 13 1
species Lentisphaera profundi 2
species Lentisphaeria bacterium 1 3
species Lentisphaeria bacterium UBA1784 1
species Lentisphaerota bacterium 2
species Lentzea californiensis 1
species Lentzea cavernae 1
species Lentzea guizhouensis 15 1
species Lentzea waywayandensis 3
species Leptodesmis sichuanensis 2
species Leptofauchea earleae 8
species Leptogranulimonas caecicola 1 2
species Leptographium clavigerum 1 1
species Leptolinea tardivitalis 142
species Leptolyngbya boryana 1 3 1 2
species Leptolyngbya foveolarum 1
species Leptolyngbya laminosa 1170 2
species Leptolyngbya sp. BL0902 1
species Leptolyngbya sp. NIES-3755 1 2
species Leptolyngbya sp. O-77 12 3
species Leptolyngbyaceae cyanobacterium JSC-12 3
species Leptomonas pyrrhocoris 1
species Leptonema illini 32
species Leptospira biflexa 3 1 1
species Leptospira borgpetersenii 1
species Leptospira interrogans 9 1 1
species Leptospira kirschneri 1
species Leptospira kmetyi 2
species Leptospira kobayashii 2
species Leptospira licerasiae 1282 2 1
species Leptospira noguchii 1
species Leptospira santarosai 8 1
species Leptospira tipperaryensis 2 1
species Leptospira weilii 1
species Leptospirillum ferriphilum 2
species Leptospirillum ferrooxidans 18 2 1
species Leptospirillum sp. Group II 'CF-1' 2
species Leptothermofonsia sichuanensis 1
species Leptothrix cholodnii 3 47
species Leptothrix discophora 698 1
species Leptotrichia buccalis 8 1 18 1 2
species Leptotrichia genomosp. C1 2
species Leptotrichia hofstadii 5 1 1 18 1
species Leptotrichia hongkongensis 8 4 11 1
species Leptotrichia shahii 13 2 33 1
species Leptotrichia sp. oral taxon 212 161 4 2
species Leptotrichia sp. oral taxon 218 2
species Leptotrichia sp. oral taxon 221 1 2
species Leptotrichia sp. oral taxon 225 1
species Leptotrichia sp. oral taxon 498 36 3 1
species Leptotrichia sp. oral taxon 847 22 1 1
species Leptotrichia sp. PTE15 11
species Leptotrichia trevisanii 6 2 154 1 2
species Leptotrichia wadei 19 14 1 169 1 1 2
species Leucobacter allii 1
species Leucobacter aridicollis 1
species Leucobacter chironomi 19
species Leucobacter chromiiresistens 4
species Leucobacter coleopterorum 17
species Leucobacter denitrificans 1 1
species Leucobacter insecticola 33 1
species Leucobacter komagatae 2 57
species Leucobacter luti 1
species Leucobacter margaritiformis 2
species Leucobacter muris 15 1 1
species Leucobacter rhizosphaerae 1
species Leucobacter sp. CX169 2
species Leucobacter sp. Psy1 1
species Leucobacter tenebrionis 1
species Leucobacter triazinivorans 16
species Leucobacter viscericola 27 1 1
species Leuconostoc carnosum 102 29 5 48 2 3 2
species Leuconostoc citreum 7 59 1 1 2 1 1
species Leuconostoc fallax 828 1
species Leuconostoc garlicum 117 18 1
species Leuconostoc gasicomitatum 98 1 13 3 1 1 1
species Leuconostoc gelidum 177 5 108 3 3 1 2 1
species Leuconostoc inhae 22 17
species Leuconostoc kimchii 37 6 1
species Leuconostoc lactis 234 20 58 1 2
species Leuconostoc mesenteroides 228 76 38 129 1 4 1 1 1 2 1
species Leuconostoc miyukkimchii 384
species Leuconostoc pseudomesenteroides 114 2 17 1 1 2
species Leuconostoc sp. C2 1
species Leuconostoc sp. C7I4 3
species Leuconostoc sp. DB-1 1
species Leuconostoc sp. LN180020 1
species Leuconostoc suionicum 9
species Leucosporidium scottii 1
species Leucothrix mucor 19 5 1
species Levilactobacillus acidifarinae 14
species Levilactobacillus brevis 26 5 120 7 1 16 2
species Levilactobacillus koreensis 7 2
species Levilactobacillus namurensis 8 49
species Levilactobacillus parabrevis 15 1
species Levilactobacillus senmaizukei 142 2
species Levilactobacillus suantsaii 3 2
species Levilactobacillus zymae 1 20 4 2
species Levilinea saccharolytica 1
species Levyella massiliensis 492 2
species Leyella lascolaii 1 1
species Leyella stercorea 2073 800 10 2 2 2 4 2 2 1
species Liberibacter crescens 3
species Lichenicola cladoniae 2
species Lichenihabitans psoromatis 13 1 1
species Lichtheimia ramosa 1
species Lientehia hominis 1
species Ligaoa zhengdingensis 2
species Ligilactobacillus acidipiscis 6 22 3 1 2
species Ligilactobacillus agilis 13 81 174 1 2
species Ligilactobacillus animalis 7 41 1
species Ligilactobacillus aviarius 1 1
species Ligilactobacillus ceti 59
species Ligilactobacillus cholophilus 1
species Ligilactobacillus equi 159 15
species Ligilactobacillus faecis 2
species Ligilactobacillus hayakitensis 173 27
species Ligilactobacillus murinus 102 2 2
species Ligilactobacillus pobuzihii 97 13
species Ligilactobacillus ruminis 263 17 262 11 1 28 6 3 1
species Ligilactobacillus saerimneri 36 1 5 4 2
species Ligilactobacillus salivarius 300 98 51 241 11 4 19 1 1 1 2
species Ligilactobacillus sp. MP3 1
species Lignipirellula cremea 2
species Lihuaxuella thermophila 1
species Limibacillus halophilus 22
species Limibacter armeniacum 1
species Limihaloglobus sulfuriphilus 32 1 2
species Limimaricola variabilis 2
species Limimonas halophila 6
species Limisphaera ngatamarikiensis 32 2
species Limnobacter litoralis 3464 34 1 1
species Limnobacter sp. SAORIC-580 6
species Limnobacter thiooxidans 5 5
species Limnobaculum parvum 14 2
species Limnobaculum zhutongyuii 15 3 2
species Limnochorda pilosa 3 175 1 2
species Limnoglobus roseus 17 2
species Limnohabitans australis 3
species Limnohabitans curvus 16
species Limnohabitans parvus 16
species Limnohabitans planktonicus 9
species Limnohabitans sp. 103DPR2 7 2
species Limnohabitans sp. 63ED37-2 26
species Limnohabitans sp. MMS-10A-178 1
species Limnohabitans sp. MORI2 1
species Limnoraphis hieronymusii 1
species Limnoraphis robusta 3
species Limnospira fusiformis 2 3
species Limnospira indica 4
species Limosilactobacillus alvi 11
species Limosilactobacillus antri 213 1
species Limosilactobacillus coleohominis 5 45 11 2 1
species Limosilactobacillus equigenerosi 1 75
species Limosilactobacillus fermentum 346 279 28 144 7 6 1 1 2
species Limosilactobacillus frumenti 153 1 7 1 1
species Limosilactobacillus gastricus 12 32 8 2
species Limosilactobacillus gorillae 25
species Limosilactobacillus ingluviei 3 25
species Limosilactobacillus mucosae 44 53 5 74 9 15 2
species Limosilactobacillus oris 79 5 26 2
species Limosilactobacillus panis 25 2
species Limosilactobacillus pontis 44 14 11 1 2
species Limosilactobacillus portuensis 1 1
species Limosilactobacillus reuteri 127 27 40 193 12 4 17 2 1 2 1
species Limosilactobacillus secaliphilus 20 14
species Limosilactobacillus vaginalis 113 53 3 49 6 5 2
species Liquorilactobacillus cacaonum 3
species Liquorilactobacillus ghanensis 13
species Liquorilactobacillus hordei 13 2 2
species Liquorilactobacillus mali 37 1 2
species Liquorilactobacillus nagelii 44 2
species Liquorilactobacillus satsumensis 1
species Liquorilactobacillus uvarum 6
species Liquorilactobacillus vini 214
species Lishizhenia caseinilytica 1
species Lishizhenia tianjinensis 2
species Listeria floridensis 53
species Listeria grayi 51 22 8 9 2
species Listeria immobilis 1
species Listeria innocua 835 23 25 3 2
species Listeria ivanovii 44 4 2
species Listeria monocytogenes 1 260 1 1 1 2 1
species Listeria newyorkensis 1 2
species Listeria seeligeri 4 1 2 1
species Listeria sp. PSOL-1 30 2
species Listeria weihenstephanensis 3 57 1
species Listeria welshimeri 24
species Litchfieldia alkalitelluris 1
species Litchfieldia salsa 1
species Litoreibacter arenae 1
species Litoribacillus peritrichatus 84
species Litoribacter alkaliphilus 47
species Litoribrevibacter albus 15
species Litorilinea aerophila 31 2 1
species Litorilituus sediminis 88 3 1 2
species Litorimonas taeanensis 1
species Litorivicinus lipolyticus 20 3 3
species Lobosporangium transversale 1
species Lodderomyces elongisporus 1 1
species Loigolactobacillus backii 25 1 2
species Loigolactobacillus bifermentans 2 13 1 1
species Loigolactobacillus coryniformis 6 68 2
species Loigolactobacillus rennini 8 8
species Loktanella atrilutea 1
species Loktanella salsilacus 1
species Longibaculum muris 1 5 2
species Longibaculum sp. KGMB06250 271 1 4 1 4
species Longicatena caecimuris 1 3 2 3 6 1 3 1
species Longicatena sp. 210702-DFI.1.100 1
species Longicatena sp. 210702-DFI.1.160 1
species Longicatena sp. 210702-DFI.1.163 1
species Longicatena sp. 210702-DFI.1.177 1
species Longicatena sp. 210702-DFI.1.194 1
species Longicatena sp. 210702-DFI.1.196 1
species Longicatena sp. 210702-DFI.1.199 1
species Longicatena sp. 210702-DFI.1.204 1
species Longicatena sp. 210702-DFI.1.211 1
species Longicatena sp. 210702-DFI.1.213 1
species Longicatena sp. 210702-DFI.1.249 1
species Longicatena sp. 210702-DFI.1.253 1
species Longicatena sp. 210702-DFI.1.255 1
species Longicatena sp. 210702-DFI.1.36 1
species Longilinea arvoryzae 23 3
species Longimonas halophila 126
species Longimycelium tulufanense 2
species Lonsdalea britannica 31 2
species Lonsdalea populi 2
species Lonsdalea quercina 47
species Lotharella vacuolata 1
species Lughvirus lugh 136
species Luminiphilus syltensis 73
species Lunatimonas lonarensis 3
species Luoshenia tenuis 2
species Luteibacter aegosomaticola 1
species Luteibacter aegosomatissinici 1
species Luteibacter anthropi 2521 56 3 1
species Luteibacter flocculans 1
species Luteibacter jiangsuensis 4
species Luteibacter pinisoli 35 1
species Luteibacter rhizovicinus 4 2 22 2
species Luteibacter yeojuensis 4
species Luteibaculum oceani 2
species Luteimicrobium xylanilyticum 12
species Luteimonas aestuarii 1
species Luteimonas aquatica 5
species Luteimonas chenhongjianii 7 1
species Luteimonas cucumeris 4
species Luteimonas granuli 7 1
species Luteimonas lumbrici 1
species Luteimonas lutimaris 3
species Luteimonas marina 1
species Luteimonas mephitis 1
species Luteimonas sp. 83-4 1
species Luteimonas sp. JM171 17 1
species Luteimonas sp. S4-F44 2
species Luteimonas sp. YGD11-2 3
species Luteimonas terricola 62 20
species Luteimonas vadosa 1
species Luteimonas yindakuii 4 1
species Luteipulveratus mongoliensis 15
species Luteitalea pratensis 106 2
species Luteitalea sp. TBR-22 2
species Luteithermobacter gelatinilyticus 48 1 1
species Luteivirga sdotyamensis 4
species Luteococcus peritonei 13 1
species Luteolibacter algae 1983 6
species Luteolibacter ambystomatis 2
species Luteolibacter cuticulihirudinis 24 2
species Luteolibacter luojiensis 6
species Luteolibacter luteus 114 2
species Luteolibacter yonseiensis 1
species Lutibacter maritimus 35
species Lutibacter profundi 2
species Lutibacter sp. A64 1
species Lutibacter sp. A80 2
species Lutibaculum baratangense 1
species Lutimonas vermicola 1
species Lutispora thermophila 487 3 4
species Lymphocryptovirus humangamma4 7
species Lysinibacillus agricola 2
species Lysinibacillus capsici 1
species Lysinibacillus cresolivorans 12
species Lysinibacillus fusiformis 4 41 1 2
species Lysinibacillus macroides 2 1
species Lysinibacillus pakistanensis 16
species Lysinibacillus parviboronicapiens 675 1 1
species Lysinibacillus sp. 2017 35 4 2
species Lysinibacillus sp. B2A1 25
species Lysinibacillus sp. CD3-6 2
species Lysinibacillus sp. PLM2 1 2
species Lysinibacillus sp. SGAir0095 49 1 1
species Lysinibacillus sp. YS11 28 1
species Lysinibacillus sphaericus 3 5 45 1 1
species Lysinibacillus varians 6 1
species Lysinibacillus xylanilyticus 9
species Lysobacter alkalisoli 2 1
species Lysobacter antibioticus 14 1
species Lysobacter caeni 1
species Lysobacter capsici 6 3 1
species Lysobacter concretionis 8
species Lysobacter daecheongensis 1
species Lysobacter daejeonensis 1
species Lysobacter defluvii 6 43
species Lysobacter deserti 442
species Lysobacter dokdonensis 2 1
species Lysobacter enzymogenes 35 3 1
species Lysobacter gummosus 2 1
species Lysobacter korlensis 17
species Lysobacter lycopersici 6
species Lysobacter maris 4 2 1
species Lysobacter niabensis 177
species Lysobacter niastensis 1
species Lysobacter oculi 6
species Lysobacter oligotrophicus 2
species Lysobacter soli 5 1
species Lysobacter sp. 1
species Lysobacter sp. cf310 1
species Lysobacter sp. HDW10 2
species Lysobacter sp. KIS68-7 1 1
species Lysobacter sp. TY2-98 6 1
species Lysobacter terrestris 1
species Lysobacter xinjiangensis 1
species Lysobacter yangpyeongensis 1 1
species Lyticum flagellatum 2
species Macrococcoides bohemicum 1
species Macrococcoides canis 91 2
species Macrococcoides caseolyticum 6 94 1 2 2
species Macrococcus armenti 2
species Macrococcus bovicus 2
species Macrococcus brunensis 6 2
species Macrococcus equipercicus 8 1 2
species Macrococcus hajekii 1 9
species Macrococcus lamae 1
species Macrococcus sp. IME1552 42 1
species Macroventuria anomochaeta 1
species Mageeibacillus indolicus 266 1 2 8 2 1
species Magnetococcus marinus 25 37 1 2
species Magnetospira sp. QH-2 23 1 1
species Magnetospira thiophila 29
species Magnetospirillum bellicum 18 2
species Magnetospirillum fulvum 6
species Magnetospirillum gryphiswaldense 2 97 2
species Magnetospirillum sp. ME-1 13 1
species Magnetospirillum sp. XM-1 20 1 1
species Magnetovibrio blakemorei 4 1
species Mahella australiensis 35 142 1 2
species Mailhella massiliensis 3 1
species Maioricimonas rarisocia 21 2
species Malaciobacter canalis 1
species Malaciobacter halophilus 7 3
species Malaciobacter marinus 109 2
species Malaciobacter molluscorum 11 2 2
species Malaciobacter mytili 6 4 1
species Malaciobacter pacificus 4 3 2
species Malacoplasma iowae 1 1
species Malacoplasma muris 1
species Malacoplasma penetrans 177 13 1 2
species Malassezia furfur 2 1
species Malassezia globosa 39
species Malassezia pachydermatis 1
species Malassezia restricta 44
species Malassezia sympodialis 5
species Maledivibacter halophilus 97 1
species Maliibacterium massiliense 266 6 3
species Mamastrovirus 3 1
species Mameliella alba 13 1
species Mammaliicoccus fleurettii 28 2
species Mammaliicoccus lentus 41 1 2
species Mammaliicoccus sciuri 7 1 103 1 1 2
species Mammaliicoccus stepanovicii 23 1 2
species Mammaliicoccus vitulinus 3 30 1 1
species Mangrovibacillus cuniculi 2
species Mangrovibacter plantisponsor 6
species Mangroviflexus xiamenensis 2
species Mangrovivirga cuniculi 2
species Mannheimia bovis 1
species Mannheimia caviae 1915 1 6
species Mannheimia granulomatis 233 1 46 1 1
species Mannheimia haemolytica 127 4 2
species Mannheimia pernigra 1
species Mannheimia sp. NCTC 11313 1
species Mannheimia sp. USDA-ARS-USMARC-1261 17 1
species Mannheimia varigena 49 9 7 80 1 1 2
species Maribacter cobaltidurans 2 2
species Maribacter goseongensis 5
species Maribacter hydrothermalis 5 3 1
species Maribacter polysiphoniae 1
species Maribacter sp. 1_2014MBL_MicDiv 1 1
species Maribacter sp. HTCC2170 5 3 2
species Maribacter sp. MAR_2009_60 1
species Maribacter sp. MJ134 3 1 2
species Maribellus comscasis 184 1 3
species Maricaulis indicus 19
species Maricaulis maris 6 2
species Marichromatium chrysaorae 32
species Marichromatium gracile 731
species Marichromatium litoris 7
species Marichromatium purpuratum 42 1
species Maridesulfovibrio bastinii 1
species Maridesulfovibrio ferrireducens 44
species Maridesulfovibrio frigidus 67 11
species Maridesulfovibrio hydrothermalis 32 4 9
species Maridesulfovibrio salexigens 64 2 142 5 13 1 2
species Maridesulfovibrio zosterae 9
species Marinagarivorans cellulosilyticus 1 1
species Marine virus AFVG_250M613 1
species Mariniblastus fucicola 2 2
species Marinicauda algicola 1
species Marinicauda pacifica 2
species Marinicella litoralis 12
species Mariniflexile gromovii 4
species Mariniflexile sp. TRM1-10 9 4 2
species Marinilabilia nitratireducens 31 1
species Marinilabilia salmonicolor 31
species Marinilactibacillus sp. 15R 87 4 2
species Marinimicrobium agarilyticum 2
species Marinimicrobium koreense 2 2
species Marininema halotolerans 2
species Marininema mesophilum 2 2
species Mariniphaga anaerophila 3
species Mariniphaga sediminis 13
species Mariniplasma anaerobium 2
species Mariniradius saccharolyticus 8
species Marinitalea sucinacia 4
species Marinithermofilum abyssi 2
species Marinithermus hydrothermalis 2 43 2
species Marinitoga aeolica 2
species Marinitoga hydrogenitolerans 14 3
species Marinitoga okinawensis 20 5
species Marinitoga piezophila 1
species Marinitoga sp. 1137 1
species Marinobacter adhaerens 2
species Marinobacter algicola 3
species Marinobacter arcticus 13
species Marinobacter bryozoorum 1
species Marinobacter caseinilyticus 1
species Marinobacter daqiaonensis 174
species Marinobacter flavimaris 6
species Marinobacter fonticola 20
species Marinobacter haloterrigenus 2
species Marinobacter lipolyticus 1
species Marinobacter lutaoensis 1 1
species Marinobacter manganoxydans 4
species Marinobacter maritimus 3 9
species Marinobacter nauticus 1 2 62 1 1
species Marinobacter salarius 32 1
species Marinobacter salinus 3
species Marinobacter salsuginis 3
species Marinobacter santoriniensis 6
species Marinobacter sediminum 1
species Marinobacter shengliensis 1
species Marinobacter similis 14
species Marinobacter sp. AND5 1
species Marinobacter sp. Arc7-DN-1 15
species Marinobacter sp. CA1 1
species Marinobacter sp. es.042 6 1
species Marinobacter sp. JH2 9 1
species Marinobacter sp. LA51 1
species Marinobacter sp. LQ44 8
species Marinobacter sp. LV10R510-11A 1
species Marinobacter sp. NP-4(2019) 12 1
species Marinobacter squalenivorans 6
species Marinobacter szutsaonensis 1 1
species Marinobacter taiwanensis 1
species Marinobacter vinifirmus 2
species Marinobacter vulgaris 1
species Marinobacterium aestuarii 58 3 1
species Marinobacterium coralli 24
species Marinobacterium iners 1
species Marinobacterium litorale 8
species Marinobacterium rhizophilum 1 1
species Marinobacterium sediminicola 4 1
species Marinobacterium sp. LSUCC0821 1 1
species Marinococcus salidurans 3
species Marinomonas algicola 1
species Marinomonas arctica 1
species Marinomonas brasilensis 9
species Marinomonas communis 14
species Marinomonas mediterranea 1 1
species Marinomonas polaris 41
species Marinomonas pontica 2
species Marinomonas posidonica 1 2
species Marinomonas primoryensis 1 1
species Marinomonas sp. MWYL1 1 1
species Marinoscillum furvescens 10
species Marinoscillum luteum 1
species Marinoscillum pacificum 6
species Marinospirillum alkaliphilum 28
species Marinospirillum minutulum 1
species Marinosulfonomonas methylotropha 1
species Marinovum algicola 24 1
species Mariprofundus aestuarium 11 2
species Mariprofundus ferrinatatus 58 2
species Mariprofundus ferrooxydans 51
species Marisediminicola antarctica 11 1
species Marisediminitalea aggregata 3
species Marispirillum indicum 99
species Maritalea myrionectae 7 2
species Maritimibacter alkaliphilus 3
species Marivirga atlantica 1
species Marivirga lumbricoides 2
species Marivirga tractuosa 5 1 2
species Marixanthomonas ophiurae 36
species Marixanthomonas sp. SCSIO 43207 1
species Marnyiella aurantia 6
species Marseillibacter massiliensis 1 29
species Martelella alba 1
species Martelella endophytica 59 1
species Martelella mediterranea 1 16 1 2
species Martelella sp. AD-3 68 1
species Marvinbryantia formatexigens 1382 6 3 14 2 9 3 4 3 2 1
species Massilia aquatica 1
species Massilia arvi 2
species Massilia eurypsychrophila 8
species Massilia forsythiae 15
species Massilia kyonggiensis 1
species Massilia oculi 1 48
species Massilia putida 44 1
species Massilia sp. HC52 2
species Massilia sp. MB5 1
species Massilia sp. NCCP-1147 11
species Massilia sp. NP310 1
species Massilia sp. NR 4-1 25
species Massilia sp. PAMC28688 1 1
species Massilia sp. WG5 39 2 2
species Massilia sp. YMA4 18 1
species Massilia varians 1 1
species Massilia violaceinigra 60 2 2
species Massilicoli timonensis 5 2
species Massiliimalia massiliensis 3 4 1
species Massiliimalia timonensis 8 1 1
species Massilimicrobiota sp. An105 1
species Massilimicrobiota timonensis 1 2 4 1
species Massilioclostridium coli 1 4 7 2 4 1
species Massilioclostridium sp. 4
species Massiliprevotella massiliensis 3 5
species Massilistercora timonensis 2 5 6 2 3 1
species Mastigamoeba balamuthi 1
species Maudiozyma humilis 2
species Mechercharimyces asporophorigenens 23
species Mediterranea massiliensis 2 3 4
species Mediterraneibacter butyricigenes 1 9 4 1
species Mediterraneibacter catenae 1 1
species Mediterraneibacter faecis 1489 2 9 4 11 9 18 11 4 1 1
species Mediterraneibacter glycyrrhizinilyticus 1365 4 5 16 9 2 1
species Mediterraneibacter gnavus 4623 1445 278 43 19 27 20 9 4 7 2 4 3 2
species Mediterraneibacter hominis 1 1
species Mediterraneibacter massiliensis 6 4 2 1
species Mediterraneibacter sp. 4
species Mediterraneibacter sp. 210702-DFI.3.120 4
species Mediterraneibacter sp. 210702-DFI.5.30 4
species Mediterraneibacter sp. gm002 2
species Mediterraneibacter sp. NSJ-151 1 2
species Megalodesulfovibrio gigas 1 43 4 1
species Megamonas funiformis 597 64 86 2 2 1 3 3 1
species Megamonas hypermegale 21 130 1 261 5 1 4 2
species Megamonas rupellensis 8 1 1 1
species Megamonas sp. 1
species Megasphaera cerevisiae 119 1 1
species Megasphaera elsdenii 1049 164 20 265 1 5 1 1 1 2
species Megasphaera genomosp. C1 8
species Megasphaera hexanoica 258 1 3 3
species Megasphaera hominis 4203 3 1 1 7
species Megasphaera indica 40
species Megasphaera lornae 6
species Megasphaera massiliensis 340 30 1 2
species Megasphaera micronuciformis 272 251 25 1 1 1
species Megasphaera paucivorans 4 8
species Megasphaera sp. BL7 1
species Megasphaera sp. BS-4 4
species Megasphaera sp. DISK 18 1
species Megasphaera sp. DNF00872 10
species Megasphaera sp. DNF00912 13
species Megasphaera sp. NM10 3
species Megasphaera sp. S6-MB2 9
species Megasphaera sp. TrE9262 12
species Megasphaera stantonii 265 9 29 3
species Megasphaera sueciensis 272
species Megasphaera vaginalis (ex Srinivasan et al. 2021) 23
species Meinhardsimonia xiamenensis 1
species Meiothermus cateniformans 1
species Meiothermus granaticius 1148
species Meiothermus ruber 22 1
species Meiothermus sp. Pnk-1 1
species Meiothermus taiwanensis 25 2
species Melaminivora alkalimesophila 1
species Melaminivora suipulveris 23 1
species Melanopsichium pennsylvanicum 1
species Melghiribacillus thermohalophilus 14
species Melghirimyces algeriensis 76
species Melghirimyces profundicolus 3
species Melghirimyces thermohalophilus 7
species Melioribacter roseus 956 38 2 4 6 1
species Melissococcus plutonius 23 5 53 2
species Melittangium boletus 94 1 1
species Melittangium lichenicola 9
species Meniscus glaucopis 76
species Merdibacter massiliensis 3 3
species Merdibacter sp. 1
species Merdimmobilis hominis 1
species Merdimonas faecis 1 1 1 2 1
species Mergibacter septicus 2
species Merismopedia punctata 1
species Merotricha bacillata 1
species Mesoaciditoga lauensis 6
species Mesobacillus foraminis 1 151 1 1 2
species Mesobacillus jeotgali 45 1 2
species Mesobacillus selenatarsenatis 69
species Mesobacillus sp. S13 2
species Mesobacillus subterraneus 13 15
species Mesobacillus thioparans 3
species Mesoflavibacter sp. SCSIO 43206 2
species Mesomycoplasma conjunctivae 7 184 1
species Mesomycoplasma dispar 1
species Mesomycoplasma flocculare 2
species Mesomycoplasma hyopneumoniae 3
species Mesomycoplasma hyorhinis 2 1
species Mesomycoplasma moatsii 4 16
species Mesomycoplasma molare 1
species Mesomycoplasma neurolyticum 212 3 1
species Mesomycoplasma ovipneumoniae 2
species Mesonia algae 7 1
species Mesonia hippocampi 9
species Mesonia ostreae 5
species Mesoplasma chauliocola 28 2
species Mesoplasma corruscae 3
species Mesoplasma entomophilum 2109 2 2 2
species Mesoplasma florum 5 1
species Mesoplasma lactucae 51 6 5 1
species Mesoplasma melaleucae 1 4
species Mesoplasma photuris 1
species Mesoplasma syrphidae 1 1
species Mesoplasma tabanidae 2
species Mesorhizobium albiziae 4
species Mesorhizobium amorphae 15 3 1
species Mesorhizobium australicum 4 3 1
species Mesorhizobium camelthorni 3
species Mesorhizobium chacoense 1
species Mesorhizobium ciceri 1 1
species Mesorhizobium erdmanii 7 1
species Mesorhizobium hawassense 1
species Mesorhizobium japonicum 8
species Mesorhizobium loti 2 47 2
species Mesorhizobium opportunistum 4
species Mesorhizobium sangaii 1
species Mesorhizobium septentrionale 2
species Mesorhizobium sp. 131-2-5 1
species Mesorhizobium sp. 8 19
species Mesorhizobium sp. AA22 6
species Mesorhizobium sp. AR02 1
species Mesorhizobium sp. AR07 1
species Mesorhizobium sp. B1-1-8 1
species Mesorhizobium sp. B2-1-1 1
species Mesorhizobium sp. B2-4-13 1
species Mesorhizobium sp. DCY119 6
species Mesorhizobium sp. INR15 1 1
species Mesorhizobium sp. L-2-11 2
species Mesorhizobium sp. L-8-3 1
species Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1 6
species Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 14 1
species Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 1 1 1
species Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 20 1
species Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 1
species Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 3
species Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 1
species Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 5 1
species Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 6 1
species Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 11 1
species Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 2 1
species Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 3
species Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 6 1 1
species Mesorhizobium sp. mat916 4
species Mesorhizobium sp. NBSH29 1
species Mesorhizobium sp. NZP2077 4
species Mesorhizobium sp. NZP2298 4 2
species Mesorhizobium sp. PAMC28654 1
species Mesorhizobium sp. Pch-S 14 1 2
species Mesorhizobium sp. WSM1497 1
species Mesorhizobium terrae 31 1
species Mesosutterella multiformis 3 1
species Mesotoga infera 2
species Mesotoga prima 2 1 2
species Metabacillus dongyingensis 1
species Metabacillus herbersteinensis 14 2
species Metabacillus litoralis 58 114 1 1 2
species Metabacillus sediminilitoris 88 6 2
species Metabacillus sp. B2-18 2
species Metabacillus sp. cB07 2
species Metabacillus sp. KUDC1714 2
species Metabacterium polyspora 1 1
species Metaclostridioides mangenotii 176
species Metallibacterium scheffleri 10
species Metallosphaera hakonensis 2 1
species Metalysinibacillus saudimassiliensis 63
species Metamycoplasma arthritidis 1
species Metamycoplasma auris 3
species Metamycoplasma hominis 8 6 4 2
species Metamycoplasma hyosynoviae 1
species Metamycoplasma phocicerebrale 1
species Metamycoplasma salivarium 1
species Metamycoplasma sualvi 6 42
species Metaplanococcus flavidus 6 1
species Metaprevotella massiliensis 2
species Methanobacterium alkalithermotolerans 1
species Methanobacterium congolense 2
species Methanobacterium curvum 2
species Methanobacterium formicicum 2
species Methanobacterium kanagiense 2
species Methanobacterium lacus 3 1
species Methanobacterium paludis 8 5 1
species Methanobacterium palustre 1
species Methanobacterium sp. BAmetb5 3
species Methanobacterium sp. MB1 2
species Methanobrevibacter acididurans 24 1
species Methanobrevibacter arboriphilus 3 1 3 1 2
species Methanobrevibacter boviskoreani 9
species Methanobrevibacter curvatus 1
species Methanobrevibacter cuticularis 1
species Methanobrevibacter filiformis 18
species Methanobrevibacter gottschalkii 84 1
species Methanobrevibacter millerae 20 1 2
species Methanobrevibacter olleyae 8 8 9 2
species Methanobrevibacter oralis 20 1
species Methanobrevibacter ruminantium 4 7 29 8 1 2
species Methanobrevibacter smithii 1057 309 209 79 28 1 3 17 4 6 2 1 1
species Methanobrevibacter sp. 7 1
species Methanobrevibacter sp. 110 2
species Methanobrevibacter sp. AbM4 9 8 13 2
species Methanobrevibacter sp. MO-MVB 3
species Methanobrevibacter sp. TLL-48-HuF1 1 2
species Methanobrevibacter sp. YE315 16 2
species Methanobrevibacter thaueri 1
species Methanobrevibacter woesei 29 54 1
species Methanobrevibacter wolinii 1
species Methanocaldococcus bathoardescens 1
species Methanocaldococcus fervens 1
species Methanocaldococcus indicus 1
species Methanocaldococcus jannaschii 8 5
species Methanocaldococcus vulcanius 1
species Methanocella arvoryzae 3 2
species Methanocella conradii 1
species Methanocella paludicola 2
species Methanococcoides burtonii 1
species Methanococcoides methylutens 1
species Methanococcus aeolicus 1 2
species Methanococcus maripaludis 6 8 11 2
species Methanococcus vannielii 1
species Methanocorpusculum labreanum 5 4 3 2
species Methanocorpusculum parvum 5
species Methanoculleus bourgensis 36 2
species Methanofervidicoccus sp. A16 1
species Methanofollis aquaemaris 2
species Methanofollis sp. W23 1
species methanogenic archaeon ISO4-H5 4
species methanogenic archaeon mixed culture ISO4-G1 5
species Methanogenium organophilum 1
species Methanogenium sp. S4BF 1
species Methanohalobium evestigatum 4 5 1
species Methanohalophilus mahii 1
species Methanohalophilus portucalensis 8 5
species Methanolacinia petrolearia 2 2
species Methanolinea sp. 1
species Methanolinea tarda 1
species Methanolobus zinderi 1
species Methanomassiliicoccaceae archaeon DOK 29 1
species Methanomassiliicoccales archaeon 3
species Methanomassiliicoccus luminyensis 55 4
species Methanomethylophilus alvi 4 2
species Methanomethylovorans hollandica 2
species Methanomicrobium antiquum 2
species Methanoplanus endosymbiosus 1
species Methanoregula boonei 1 2
species Methanoregula formicica 2 1
species Methanosalsum zhilinae 2
species Methanosarcina acetivorans 4 3 2
species Methanosarcina barkeri 2 1 9 14 2
species Methanosarcina horonobensis 1 1
species Methanosarcina lacustris 1 2
species Methanosarcina mazei 4 2
species Methanosarcina siciliae 2 1
species Methanosarcina sp. Kolksee 1
species Methanosarcina sp. MTP4 8 7 2
species Methanosarcina thermophila 1
species Methanosarcina vacuolata 1 1
species Methanosarcinales archaeon ANME-1 ERB6 1
species Methanosphaera cuniculi 16 5 8
species Methanosphaera sp. BMS 2 8 8 2
species Methanosphaera sp. ISO3-F5 2 1
species Methanosphaera stadtmanae 197 32 29 11 11 1 1 14 2
species Methanosphaerula palustris 1
species Methanospirillum hungatei 4 3 2
species Methanospirillum sp. J.3.6.1-F.2.7.3 1
species Methanothermobacter marburgensis 1
species Methanothermobacter thermautotrophicus 2
species Methanothermobacter thermophilus 1
species Methanothermococcus okinawensis 1 1
species Methanothermococcus thermolithotrophicus 1
species Methanothermus fervidus 1
species Methanothrix harundinacea 2 2
species Methanothrix soehngenii 1 2
species Methanothrix sp. 1
species Methanothrix thermoacetophila 2
species Methanotorris igneus 1
species Methylacidimicrobium sp. AP8 1
species Methylacidimicrobium sp. B4 1
species Methylacidiphilum kamchatkense 1
species Methylibium petroleiphilum 6 1
species Methylibium sp. Pch-M 12
species Methylobacillus flagellatus 43 18 1
species Methylobacillus glycogenes 2088 1 2
species Methylobacillus pratensis 4
species Methylobacter luteus 2
species Methylobacter psychrophilus 2
species Methylobacter sp. S3L5C 2
species Methylobacter tundripaludum 1 1
species Methylobacter whittenburyi 4
species Methylobacterium adhaesivum 11 3
species Methylobacterium aquaticum 56
species Methylobacterium brachiatum 73
species Methylobacterium brachythecii 1
species Methylobacterium bullatum 76
species Methylobacterium cerastii 1
species Methylobacterium currus 55
species Methylobacterium dankookense 2
species Methylobacterium durans 63 1 1
species Methylobacterium goesingense 54
species Methylobacterium gossipiicola 2
species Methylobacterium gregans 1
species Methylobacterium hispanicum 2
species Methylobacterium indicum 1 1
species Methylobacterium iners 1
species Methylobacterium jeotgali 2 2
species Methylobacterium komagatae 2
species Methylobacterium longum 7
species Methylobacterium mesophilicum 28 71 2
species Methylobacterium nodulans 67 1 1
species Methylobacterium organophilum 3 3 1 1
species Methylobacterium oryzae 35
species Methylobacterium oxalidis 1
species Methylobacterium phyllosphaerae 56
species Methylobacterium radiodurans 69 2 1
species Methylobacterium radiotolerans 1 49
species Methylobacterium soli 2
species Methylobacterium sp. 17Sr1-1 45 2
species Methylobacterium sp. 4-46 60 1
species Methylobacterium sp. AMS5 49 1
species Methylobacterium sp. C1 44
species Methylobacterium sp. CBMB45 2
species Methylobacterium sp. DM1 49 3
species Methylobacterium sp. F15 1
species Methylobacterium sp. FF17 1
species Methylobacterium sp. JC86 1
species Methylobacterium sp. RK-2008-1 1
species Methylobacterium sp. WL1 70 2
species Methylobacterium sp. XJLW 42
species Methylobacterium tardum 1
species Methylobacterium terrae 49 2
species Methylobacterium variabile 2
species Methylocaldum gracile 3
species Methylocaldum marinum 18 3 2
species Methyloceanibacter caenitepidi 23
species Methyloceanibacter sp. wino2 33 1
species Methylocella palustris 7
species Methylocella silvestris 2 38 1
species Methylocella tundrae 10 2 1
species Methylococcus capsulatus 1 16 1 2
species Methylococcus geothermalis 26
species Methylococcus sp. EFPC2 1
species Methylococcus sp. Mc7 1
species Methylococcus thermophilus 1
species Methylocystis bryophila 13 1 1
species Methylocystis heyeri 5 24 1
species Methylocystis parvus 20
species Methylocystis rosea 1 25 1
species Methylocystis sp. SB2 1
species Methylocystis sp. SC2 3 2
species Methylogaea oryzae 100 1 2 2 1
species Methyloglobulus morosus 100
species Methylohalobius crimeensis 29
species Methylohalomonas lacus 15
species Methyloligella solikamskensis 2
species Methyloligella sp. GL2 34 1
species Methylomagnum ishizawai 24 2
species Methylomarinovum caldicuralii 29 1
species Methylomonas clara 1
species Methylomonas denitrificans 20 3 1
species Methylomonas koyamae 1
species Methylomonas lenta 1
species Methylomonas methanica 1 4 12 1 1
species Methylomonas paludis 1
species Methylomonas rhizoryzae 7 1
species Methylomonas scandinavica 4
species Methylomonas sp. DH-1 1 1
species Methylomonas sp. LL1 1
species Methylomonas sp. LW13 9
species Methylomusa anaerophila 139 1 3 2
species Methylonatrum kenyense 2966 6 1 1
species Methyloparacoccus murrellii 2
species Methylophaga alcalica 13
species Methylophaga aminisulfidivorans 4
species Methylophaga frappieri 71 9 1
species Methylophaga lonarensis 21
species Methylophaga marina 1
species Methylophaga muralis 43
species Methylophaga natronica 158
species Methylophaga nitratireducenticrescens 6 1
species Methylophaga thiooxydans 24 6
species Methylophilus methylotrophus 1
species Methylophilus sp. TWE2 1
species Methylorubrum extorquens 76 1 2
species Methylorubrum populi 93 1 1
species Methylorubrum zatmanii 8
species Methylosinus acidophilus 2
species Methylosinus pucelana 3
species Methylosinus sp. C49 16 1 1
species Methylosinus trichosporium 1 13 3
species Methylosoma difficile 2
species Methylosphaera hansonii 5
species Methylotenera mobilis 13 101 1
species Methylotenera versatilis 6 1 2
species Methylotuvimicrobium alcaliphilum 1 1
species Methylotuvimicrobium buryatense 1
species Methylotuvimicrobium kenyense 1
species Methylotuvimicrobium pelagicum 2 6
species Methyloversatilis discipulorum 30
species Methyloversatilis sp. RAC08 56 2
species Methyloversatilis thermotolerans 1
species Methyloversatilis universalis 158 4
species Methylovirgula ligni 8 1
species Methylovirgula sp. HY1 2
species Methylovorus glucosotrophus 1 1
species Methylovorus sp. MP688 1
species Methylovulum miyakonense 3
species Methylovulum psychrotolerans 5 1 2
species Metschnikowia aff. pulcherrima 1
species Metschnikowia pulcherrima 4
species Meyerozyma guilliermondii 1
species Micavibrio aeruginosavorus 79 3 1
species Microaerobacter geothermalis 52
species Microbacter margulisiae 278 2
species Microbacterium abyssi 1
species Microbacterium amylolyticum 16 2
species Microbacterium aquimaris 1
species Microbacterium arabinogalactanolyticum 1
species Microbacterium atlanticum 1
species Microbacterium aurantiacum 1
species Microbacterium aurum 18
species Microbacterium azadirachtae 1
species Microbacterium binotii 3
species Microbacterium caowuchunii 13
species Microbacterium chocolatum 10 1 1
species Microbacterium cremeum 1
species Microbacterium endophyticum 13 1
species Microbacterium esteraromaticum 8
species Microbacterium foliorum 58 1
species Microbacterium ginsengisoli 2 13
species Microbacterium gubbeenense 8 1
species Microbacterium halophilum 38 212
species Microbacterium hominis 50 1
species Microbacterium ketosireducens 1
species Microbacterium kribbense 9
species Microbacterium lacticum 6
species Microbacterium lemovicicum 12
species Microbacterium liquefaciens 2
species Microbacterium lushaniae 6 1
species Microbacterium luteolum 1
species Microbacterium marinilacus 1
species Microbacterium nanhaiense 1 1
species Microbacterium oleivorans 28 2
species Microbacterium oryzae 11
species Microbacterium oxydans 38 1
species Microbacterium paludicola 1
species Microbacterium paraoxydans 3
species Microbacterium profundi 1 5
species Microbacterium protaetiae 20 1 2
species Microbacterium proteolyticum 1
species Microbacterium pygmaeum 15 2
species Microbacterium resistens 2
species Microbacterium saperdae 1
species Microbacterium schleiferi 2 1
species Microbacterium sediminis 37
species Microbacterium sp. 1.5R 1
species Microbacterium sp. 10M-3C3 7 1
species Microbacterium sp. 1S1 5
species Microbacterium sp. 4R-513 8 1
species Microbacterium sp. ABRD28 1
species Microbacterium sp. BH-3-3-3 12 1 1
species Microbacterium sp. CBA3102 7
species Microbacterium sp. CGR1 1 2
species Microbacterium sp. cx-55 1
species Microbacterium sp. H1-D42 1
species Microbacterium sp. HD4P20 1
species Microbacterium sp. JZ31 2
species Microbacterium sp. KUDC0406 2
species Microbacterium sp. LKL04 6
species Microbacterium sp. MYb66 1
species Microbacterium sp. No. 7 18 1 2
species Microbacterium sp. PAMC 28756 7
species Microbacterium sp. PM5 14
species Microbacterium sp. RG1 8
species Microbacterium sp. TPU 3598 10 1
species Microbacterium sp. XT11 11 1
species Microbacterium sp. Y-01 8 1
species Microbacterium suwonense 1
species Microbacterium terricola 1 1
species Microbacterium testaceum 15
species Microbacterium trichothecenolyticum 194
species Microbacterium wangchenii 13
species Microbacterium xinjiangensis 59
species Microbispora rosea 12
species Microbulbifer agarilyticus 11
species Microbulbifer aggregans 9 2
species Microbulbifer cystodytense 2
species Microbulbifer elongatus 1
species Microbulbifer hydrolyticus 19
species Microbulbifer sp. A4B17 19 3
species Microbulbifer sp. ALW1 17 2
species Microbulbifer sp. GL-2 1
species Microbulbifer sp. SH-1 44 2
species Microbulbifer sp. THAF38 2
species Microbulbifer sp. YPW1 11 1
species Microbulbifer thermotolerans 42 2 1
species Microcella alkalica 2
species Microcella alkaliphila 22
species Microcella flavibacter 10
species Microcella indica 11 1
species Microchaete diplosiphon 3
species Micrococcus luteus 22 3 163 1
species Micrococcus lylae 18
species Micrococcus sp. A1 10
species Micrococcus sp. A7 1
species Micrococcus sp. KBS0714 10
species Micrococcus thailandicus 5
species Micrococcus yunnanensis 24 1
species Microcoleus antarcticus 728
species Microcystis aeruginosa 1 2 1
species Microcystis elabens 2
species Microcystis panniformis 23 1
species Microcystis sp. MC19 1
species Microlunatus aurantiacus 1
species Microlunatus capsulatus 8
species Microlunatus elymi 33 2
species Microlunatus parietis 1
species Microlunatus phosphovorus 1 22 1 2
species Microlunatus sagamiharensis 3 4 16
species Microlunatus soli 14
species Microlunatus sp. Gsoil 973 21 1
species Microlunatus terrae 1
species Micromonas commoda 1
species Micromonas pusilla 1
species Micromonospora aurantiaca 3 1
species Micromonospora auratinigra 1
species Micromonospora brunnescens 9
species Micromonospora carbonacea 22 1
species Micromonospora chokoriensis 3
species Micromonospora coriariae 3
species Micromonospora coxensis 1
species Micromonospora echinaurantiaca 2
species Micromonospora echinofusca 5
species Micromonospora echinospora 5
species Micromonospora endophytica 1
species Micromonospora ferruginea 1
species Micromonospora gifhornensis 6
species Micromonospora halophytica 3
species Micromonospora inositola 3
species Micromonospora jinlongensis 5
species Micromonospora krabiensis 2
species Micromonospora maris 8 1 1
species Micromonospora narathiwatensis 5
species Micromonospora purpureochromogenes 2 1 3
species Micromonospora qiuiae 3
species Micromonospora rifamycinica 44 9 6
species Micromonospora sagamiensis 1
species Micromonospora siamensis 4
species Micromonospora sp. B006 2 1
species Micromonospora sp. HM134 1 1
species Micromonospora sp. L5 1
species Micromonospora sp. LH3U1 1 1
species Micromonospora sp. WMMA2032 1 1
species Micromonospora sp. WMMC415 4
species Micromonospora terminaliae 1
species Micromonospora tulbaghiae 1
species Micromonospora violae 1
species Micromonospora viridifaciens 2
species Micromonospora zamorensis 3
species Micropruina glycogenica 53 1
species Micropruina sp. 73
species Microscilla marina 2
species Microscilla sp. PRE1 1
species Microsporum canis 1
species Microterricola viridarii 63 3 1
species Microtetraspora glauca 22
species Microvenator marinus 4 1
species Microvirga flocculans 1
species Microvirga ossetica 60 1
species Microvirga sp. 17 mud 1-3 58 2
species Microvirga sp. VF16 1
species Microvirga thermotolerans 48 1
species Microvirga zambiensis 3
species Microvirgula aerodenitrificans 7 35 2
species Microviridae sp. 11 9
species Microviridae sp. ctbyf5 1
species Microviridae sp. ctNWS1 1
species Millionella massiliensis 1
species Millisia brevis 1
species Miltoncostaea marina 2
species Miltoncostaea oceani 1 2
species Minicystis rosea 5 79
species Miniimonas sp. S16 20 1 1
species Miniphocaeibacter halophilus 1 2
species Mitoviridae sp. 1
species Mitsuaria sp. 7 36 3
species Mitsuokella jalaludinii 185 52 15 1
species Mitsuokella multacida 205 100 6 3 1 1
species Mitsuokella sp. DJF_RR21 1
species Mitsuokella sp. TM-10 5 2
species Mixia osmundae 1
species Mixta calida 1
species Mixta gaviniae 18 2
species Mixta intestinalis 32 1
species Mixta theicola 30 1
species Mizugakiibacter sediminis 34
species Mobilitalea sibirica 146 3
species Mobiluncus curtisii 4 208 101 172 8 1 2 12 2
species Mobiluncus massiliensis 1 2
species Mobiluncus mulieris 39 23 4 1
species Modestobacter marinus 8 20 1
species Modestobacter multiseptatus 3 1
species Modestobacter roseus 106
species Modestobacter sp. L9-4 1
species Modestobacter versicolor 3
species Modicisalibacter ilicicola 274 2
species Modicisalibacter muralis 1
species Modicisalibacter tunisiensis 1
species Moesziomyces antarcticus 2
species Mogibacterium diversum 13 11 251 2 6 2 1 3 1
species Mogibacterium kristiansenii 1
species Mogibacterium neglectum 18 7
species Mogibacterium pumilum 37 263 1
species Mogibacterium sp. 1
species Mogibacterium sp. CM96 2
species Mogibacterium timidum 505 333 5
species Mogibacterium vescum 916 399
species Moheibacter sediminis 14
species Moineauvirus Abc2 1
species Moineauvirus mv7201 2
species Mollisia scopiformis 1
species Molluscum contagiosum virus 2 1
species Mongoliicoccus alkaliphilus 17
species Mongoliitalea daihaiensis 2
species Mongoliitalea lutea 1
species Monoglobus pectinilyticus 2 3 3 3 1
species Monomastix sp. OKE-1 1
species Monoraphidium neglectum 1
species Monosiga brevicollis 2
species Mooglevirus mordin 1
species Mooreia alkaloidigena 10
species Moorella glycerini 48 170 1
species Moorella humiferrea 59
species Moorella mulderi 17
species Moorella sp. Hama-1 1 2
species Moorella thermoacetica 4 178 3 1 2
species Moorena producens 79 4 2
species Moraxella boevrei 1
species Moraxella bovis 1
species Moraxella bovoculi 2
species Moraxella canis 1
species Moraxella catarrhalis 1 9 1
species Moraxella caviae 115
species Moraxella equi 1
species Moraxella lacunata 3
species Moraxella lincolnii 1
species Moraxella nasovis 2
species Moraxella oblonga 5
species Moraxella osloensis 23 121 2
species Moraxella ovis 2
species Moraxella sp. 1967 1
species Moraxella sp. BBN2P-02d 1
species Moraxella sp. FZFQ2102 1
species Morchella sextelata 1
species Mordavella massiliensis 9 1
species Morganella morganii 81 201 4 208 9 1 19 1 1 2
species Morganella psychrotolerans 347 38
species Moritella japonica 2
species Moritella marina 1
species Moritella yayanosii 1 1
species Morococcus cerebrosus 1
species Mortierella alpina 1
species Moryella indoligenes 292 1181 23 2 9 2
species Mucilaginibacter auburnensis 1
species Mucilaginibacter calamicampi 3
species Mucilaginibacter celer 41 4 2
species Mucilaginibacter daejeonensis 5 2
species Mucilaginibacter defluvii 1
species Mucilaginibacter ginkgonis 2
species Mucilaginibacter ginsenosidivorans 17 1
species Mucilaginibacter ginsenosidivorax 6 29 1 2
species Mucilaginibacter gossypii 1
species Mucilaginibacter gotjawali 26 1 2
species Mucilaginibacter jinjuensis 1 2
species Mucilaginibacter kameinonensis 1
species Mucilaginibacter koreensis 15
species Mucilaginibacter lutimaris 1
species Mucilaginibacter mali 93 2
species Mucilaginibacter mallensis 83
species Mucilaginibacter paludis 3
species Mucilaginibacter robiniae 56 2
species Mucilaginibacter rubeus 64 1
species Mucilaginibacter sp. 14171R-50 43 1
species Mucilaginibacter sp. 21P 2
species Mucilaginibacter sp. PAMC 26640 68 3
species Mucilaginibacter sp. SMC90 2
species Mucilaginibacter ximonensis 2
species Mucilaginibacter xinganensis 15 1 1
species Mucinivorans hirudinis 89 238 1 2
species Mucisphaera calidilacus 81 1 2
species Mucispirillum schaedleri 6 4 4 2
species Murdochiella asaccharolytica 2 28 5
species Murdochiella massiliensis 1
species Murdochiella sp. S5-A16 3
species Murdochiella sp. S9 PR-10 161
species Murdochiella vaginalis 269 1 4 2
species Muribacter muris 5
species Muribaculaceae bacterium 1
species Muribaculum gordoncarteri 263 3
species Muribaculum intestinale 263 2 4 1 2 3
species Muribaculum sp. H5 4
species Muricauda sp. SCSIO 64092 2
species Muricauda sp. SCSIO 65647 1
species Muricomes intestini 1 6 1
species Muricomes sp. OA1 2
species Muriicola soli 1 1
species Murimonas intestini 1404 3 1 2 1 1
species Mushuvirus mushu 1
species Musicola paradisiaca 31 63 1 2
species Muvirus mu 7
species Myceligenerans crystallogenes 73
species Mycetocola lacteus 3
species Mycetocola sp. JXN-3 1
species Mycetocola spongiae 2
species Mycetocola zhujimingii 12 2 2
species Mycetohabitans rhizoxinica 35 19
species Mychonastes jurisii 1
species Mycoavidus cysteinexigens 2
species Mycobacterium adipatum 17 1 1
species Mycobacterium aquaticum 1
species Mycobacterium avium 11 1
species Mycobacterium basiliense 10 1
species Mycobacterium botniense 3 5
species Mycobacterium branderi 6
species Mycobacterium buckleii 1
species Mycobacterium canetti 2 3
species Mycobacterium colombiense 6 3
species Mycobacterium conspicuum 7
species Mycobacterium cookii 9
species Mycobacterium dioxanotrophicus 10 1
species Mycobacterium europaeum 1
species Mycobacterium florentinum 9
species Mycobacterium gallinarum 10
species Mycobacterium gordonae 2 8 1
species Mycobacterium haemophilum 10 1
species Mycobacterium heidelbergense 2
species Mycobacterium intracellulare 4 1
species Mycobacterium kansasii 16 2
species Mycobacterium kubicae 1
species Mycobacterium lacticola 7
species Mycobacterium lacus 5
species Mycobacterium lehmannii 1
species Mycobacterium lentiflavum 1
species Mycobacterium leprae 5
species Mycobacterium lepraemurium 1
species Mycobacterium lepromatosis 5
species Mycobacterium mantenii 10
species Mycobacterium marinum 1
species Mycobacterium marseillense 9
species Mycobacterium neglectum 2
species Mycobacterium noviomagense 9 1
species Mycobacterium paragordonae 20 2 1
species Mycobacterium parascrofulaceum 2
species Mycobacterium paraseoulense 6
species Mycobacterium parmense 9 1
species Mycobacterium riyadhense 8
species Mycobacterium saskatchewanense 11
species Mycobacterium seoulense 2 1
species Mycobacterium shigaense 7
species Mycobacterium shinjukuense 6
species Mycobacterium simiae 10
species Mycobacterium simulans 3
species Mycobacterium sp. djl-10 7 1
species Mycobacterium sp. DL440 6
species Mycobacterium sp. DL592 11
species Mycobacterium sp. ELW1 12
species Mycobacterium sp. EPa45 5 1 1
species Mycobacterium sp. IDR2000157661 1
species Mycobacterium sp. JS623 14 1 1
species Mycobacterium sp. KNUC287 1
species Mycobacterium sp. KNUC297 1
species Mycobacterium sp. MS1601 21 1
species Mycobacterium sp. PYR15 3
species Mycobacterium sp. 'ratisbonense' 2
species Mycobacterium sp. THAF192 1
species Mycobacterium sp. UM_3 1
species Mycobacterium sp. UNC410CL29Cvi84 3
species Mycobacterium stomatepiae 11
species Mycobacterium sydneyiensis 15
species Mycobacterium talmoniae 1
species Mycobacterium tuberculosis 339 3 1
species Mycobacterium vicinigordonae 1
species Mycobacterium xenopi 8
species Mycobacteroides abscessus 65 3 2
species Mycobacteroides chelonae 6 1
species Mycobacteroides immunogenum 8
species Mycobacteroides salmoniphilum 1 15
species Mycobacteroides saopaulense 26
species Mycolicibacillus koreensis 10
species Mycolicibacter arupensis 1
species Mycolicibacter hiberniae 8
species Mycolicibacter minnesotensis 12
species Mycolicibacter senuensis 3 4
species Mycolicibacter terrae 14
species Mycolicibacterium aichiense 6
species Mycolicibacterium alvei 5
species Mycolicibacterium anyangense 11 1
species Mycolicibacterium arabiense 17 1
species Mycolicibacterium aubagnense 17
species Mycolicibacterium aurum 91 2
species Mycolicibacterium boenickei 6 1
species Mycolicibacterium brumae 1
species Mycolicibacterium celeriflavum 7
species Mycolicibacterium chitae 2 14 1 2
species Mycolicibacterium chubuense 5 1
species Mycolicibacterium confluentis 1 18
species Mycolicibacterium crocinum 6 7
species Mycolicibacterium diernhoferi 3
species Mycolicibacterium doricum 8 1
species Mycolicibacterium duvalii 9
species Mycolicibacterium fallax 10
species Mycolicibacterium flavescens 9
species Mycolicibacterium frederiksbergense 1 16
species Mycolicibacterium gadium 7
species Mycolicibacterium gilvum 2 15 3 1
species Mycolicibacterium goodii 8
species Mycolicibacterium grossiae 12
species Mycolicibacterium hassiacum 2 19 20 1
species Mycolicibacterium helvum 12 1
species Mycolicibacterium insubricum 15
species Mycolicibacterium litorale 91
species Mycolicibacterium madagascariense 12
species Mycolicibacterium mageritense 13 1
species Mycolicibacterium monacense 1
species Mycolicibacterium moriokaense 11
species Mycolicibacterium neoaurum 3 1 2
species Mycolicibacterium neworleansense 1
species Mycolicibacterium nivoides 3 1
species Mycolicibacterium novocastrense 1
species Mycolicibacterium parafortuitum 9 1
species Mycolicibacterium phocaicum 28
species Mycolicibacterium poriferae 3
species Mycolicibacterium psychrotolerans 11
species Mycolicibacterium pulveris 9
species Mycolicibacterium rhodesiae 16 1 1 2
species Mycolicibacterium rufum 1
species Mycolicibacterium rutilum 21
species Mycolicibacterium sarraceniae 14
species Mycolicibacterium sediminis 9
species Mycolicibacterium smegmatis 7 40
species Mycolicibacterium sp. YH-1 1
species Mycolicibacterium thermoresistibile 12 1
species Mycolicibacterium tokaiense 2
species Mycolicibacterium vaccae 1 16 1
species Mycolicibacterium vanbaalenii 4 8 1 1
species Mycoplasma anserisalpingitidis 8 1
species Mycoplasma buteonis 142 1 1
species Mycoplasma capricolum 13 2 1
species Mycoplasma coccoides 88
species Mycoplasma cottewii 1
species Mycoplasma crocodyli 1 1
species Mycoplasma feliminutum 35 4
species Mycoplasma feriruminatoris 2 1
species Mycoplasma haemocanis 1
species Mycoplasma haemofelis 1
species Mycoplasma iguanae 855 199 1 1 2 1
species Mycoplasma insons 189
species Mycoplasma leachii 1
species Mycoplasma leonicaptivi 151 173
species Mycoplasma miroungigenitalium 10 1
species Mycoplasma miroungirhinis 1
species Mycoplasma mycoides 1 2
species Mycoplasma nasistruthionis 1
species Mycoplasma ovis 2 1
species Mycoplasma parvum 1
species Mycoplasma sp. 1654_15 1
species Mycoplasma sp. E35C 1
species Mycoplasma sp. Ms02 1
species Mycoplasma sp. NEAQ87857 4 2
species Mycoplasma sp. OR1901 1
species Mycoplasma sp. SG1 1
species Mycoplasma spermatophilum 3 1 1
species Mycoplasma struthionis 1
species Mycoplasma suis 1
species Mycoplasma timone 722 1
species Mycoplasma vulturii 2 204
species Mycoplasma wenyonii 4 1
species Mycoplasma yeatsii 2 1
species Mycoplasmoides fastidiosum 1
species Mycoplasmoides gallisepticum 1 1 1
species Mycoplasmoides genitalium 1
species Mycoplasmoides pneumoniae 2 8 1
species Mycoplasmopsis adleri 1
species Mycoplasmopsis agalactiae 1
species Mycoplasmopsis anatis 1 1
species Mycoplasmopsis arginini 6 1
species Mycoplasmopsis bovigenitalium 2 2
species Mycoplasmopsis bovirhinis 225 2
species Mycoplasmopsis bovis 1 1
species Mycoplasmopsis californica 9 2
species Mycoplasmopsis canis 1
species Mycoplasmopsis columbinasalis 17 50
species Mycoplasmopsis cynos 1
species Mycoplasmopsis edwardii 3512 3 3 1 1 1 1
species Mycoplasmopsis equigenitalium 1
species Mycoplasmopsis fermentans 1 1
species Mycoplasmopsis gallinacea 8 2
species Mycoplasmopsis gallopavonis 1
species Mycoplasmopsis glycophila 1
species Mycoplasmopsis lipofaciens 6
species Mycoplasmopsis lipophila 447 1 1
species Mycoplasmopsis meleagridis 1
species Mycoplasmopsis pulmonis 85
species Mycoplasmopsis synoviae 1
species Mycoplasmopsis verecunda 336
species Myoviridae sp. 7
species Myoviridae sp. ct0e511 1
species Myoviridae sp. ct8aR17 1
species Myoviridae sp. ct8iP21 1
species Myoviridae sp. ct9Ns12 1
species Myoviridae sp. ctaUM17 1
species Myoviridae sp. ctcaJ26 1
species Myoviridae sp. cteBs22 1
species Myoviridae sp. ctFYw8 1
species Myoviridae sp. ctHMa1 1
species Myoviridae sp. ctm8X17 1
species Myoviridae sp. ctrnx29 1
species Myoviridae sp. ctt8G1 1
species Myoviridae sp. ctTrm2 1
species Myoviridae sp. ctu6J18 1
species Myoviridae sp. ctuSi15 1
species Myoviridae sp. ctVeR24 1
species Myoviridae sp. ctXRl20 1
species Myroides albus 1
species Myroides fluvii 3
species Myroides guanonis 1
species Myroides injenensis 19 8
species Myroides marinus 1
species Myroides odoratimimus 1 20 2
species Myroides odoratus 3 3 1 1
species Myroides phaeus 24 1
species Myroides profundi 1 1 1
species Myroides sp. A21 1 1
species Myroides sp. ZB35 1 1
species Mytilinidion resinicola 1
species Myxococcus fulvus 51 1
species Myxococcus hansupus 31 1
species Myxococcus stipitatus 46 1 1
species Myxococcus xanthus 1 108 1 2
species Nafulsella turpanensis 14
species Naganishia albida 1
species Nakamurella antarctica 11 1 1
species Nakamurella flavida 1
species Nakamurella multipartita 1 35 1 2
species Nakamurella panacisegetis 28
species Nakamurella sp. PAMC28650 1
species Nakaseomyces glabratus 8
species Nanchangia anserum 2
species Nannochloropsis oceanica 1
species Nannocystis pusilla 6
species Natranaerobaculum magadiense 4
species Natranaerobius thermophilus 6 50 1 2
species Natranaerobius trueperi 48
species Natranaerofaba carboxydovora 1 2
species Natranaerovirga hydrolytica 721 2 2
species Natranaerovirga pectinivora 346 3 8
species Natrarchaeobaculum aegyptiacum 2
species Natribacillus halophilus 4
species Natrinema halophilum 1
species Natrinema pellirubrum 1
species Natrinema sp. DC36 1 1
species Natrinema sp. J7-2 1 1
species Natrinema sp. SYSU A 869 1
species Natrinema zhouii 1
species Natroniella acetigena 2
species Natroniella sulfidigena 7
species Natronincola ferrireducens 7
species Natronincola histidinovorans 105 1
species Natronincola peptidivorans 3701 2 5
species Natronobacterium gregoryi 1
species Natronococcus occultus 1
species Natronococcus sp. CG52 1
species Natronoglycomyces albus 2
species Natronomonas gomsonensis 1
species Natronomonas halophila 6
species Natronomonas moolapensis 11 1
species Natronomonas pharaonis 11 2 1
species Natronomonas salina 3
species Natronorubrum aibiense 1
species Natronorubrum bangense 1
species Natronorubrum daqingense 1
species Natronosporangium hydrolyticum 1
species Naumannella halotolerans 32
species Naumovozyma castellii 8
species Nautilia lithotrophica 2
species Nautilia nitratireducens 5
species Nautilia profundicola 2 41 1
species Nautilia sp. PV-1 4 1
species Ndongobacter massiliensis 257 1 2
species Necropsobacter rosorum 12
species Negativibacillus massiliensis 1 1 18 5 9 3 4 2
species Negativicoccus massiliensis 247 1
species Negativicoccus sp. S5-A15 100
species Negativicoccus succinicivorans 2371 514 13 3 1 3 4 1 2
species Neglectibacter sp. 4
species Neglectibacter timonensis 6 9 1 1 1
species Neisseria animalis 9 1
species Neisseria animaloris 19 1
species Neisseria arctica 2
species Neisseria bacilliformis 1 2 41 1 1
species Neisseria brasiliensis 13
species Neisseria canis 2 1
species Neisseria chenwenguii 46 1 2
species Neisseria cinerea 322 2 12 1 2
species Neisseria dentiae 13 41
species Neisseria dumasiana 1 1
species Neisseria elongata 55 8 1 102 1 2 4 2 1
species Neisseria flavescens 101 4 4 14 1 1 4
species Neisseria gonorrhoeae 1 1 17 2
species Neisseria iguanae 2
species Neisseria lactamica 43 1 42 1 1
species Neisseria lisongii 1
species Neisseria macacae 9
species Neisseria meningitidis 5 4 92 1 4 1
species Neisseria mucosa 578 52 115 1 2 5 2
species Neisseria oralis 8 1
species Neisseria polysaccharea 7 62
species Neisseria shayeganii 31 1
species Neisseria sicca 6 1 28 2
species Neisseria sp. Dent CA1/247 1
species Neisseria sp. KEM232 42 2
species Neisseria sp. Marseille-Q6792 1
species Neisseria sp. oral taxon 014 20
species Neisseria subflava 13 87 1 1 2
species Neisseria wadsworthii 12
species Neisseria weaveri 19 2
species Neisseria weixii 4 1
species Neisseria zalophi 23
species Neisseria zoodegmatis 6
species Neisseriaceae bacterium DSM 100970 1
species Neoasaia chiangmaiensis 2 18
species Neobacillus drentensis 1 2
species Neobacillus mesonae 171 1 2 2
species Neobacillus niacini 2
species Neobacillus sp. 114 1
species Neobacillus sp. WH10 1
species Neobacillus sp. YX16 1
species Neobacillus thermocopriae 1
species Neobittarella massiliensis 7 2 2 1
species Neochlamydia hartmannellae 1
species Neochlamydia sp. S13 1 1
species Neoehrlichia mikurensis 1
species Neokomagataea tanensis 14
species Neolewinella lutea 2
species Neolewinella marina 40
species Neolewinella xylanilytica 1
species Neomegalonema perideroedes 26 1
species Neomicrococcus aestuarii 34
species Neonectria neomacrospora 1
species Neorhizobium galegae 119 4 1
species Neorhizobium petrolearium 1
species Neorhizobium sp. NCHU2750 20 4
species Neorhizobium sp. SOG26 20 1 1
species Neorhodopirellula lusitana 1
species Neorickettsia helminthoeca 26 1
species Neoroseomonas lacus 2
species Neoroseomonas terrae 5
species Neoscardovia arbecensis 94
species Neospora caninum 5
species Neotabrizicola shimadae 1
species Nephroselmis olivacea 1
species Neptuniibacter caesariensis 2
species Neptunomonas japonica 2
species Neptunomonas naphthovorans 12
species Neptunomonas phycophila 1
species Neptunomonas qingdaonensis 1
species Nesterenkonia alba 16
species Nesterenkonia flava 8
species Nesterenkonia halobia 6 1
species Nesterenkonia lacusekhoensis 1
species Nesterenkonia sandarakina 1
species Nesterenkonia sp. NBAIMH1 52 1 1
species Nesterenkonia terrae 2
species Neurospora crassa 8
species Nevskia aquatilis 4
species Nevskia ramosa 2 2
species Nevskia soli 80
species Nevskia sp. Iso-59 1
species Nevskia terrae 1
species Niabella aurantiaca 866 1132 2
species Niabella ginsenosidivorans 63 1 1 2
species Niabella soli 114 2 48 3 1 1
species Niabella yanshanensis 2
species Niallia circulans 5 1 5 2
species Niallia nealsonii 5
species Niallia sp. Man26 1 2
species Niallia sp. RD1 1 2
species Niastella koreensis 92 89 2 2
species Niastella populi 5
species Niastella yeongjuensis 11
species Nibribacter koreensis 71
species Nibribacter ruber 27 1 1
species Nibricoccus aquaticus 15 2
species Nicoletella semolina 22 2
species Nicoliella spurrieriana 2
species Nisaea acidiphila 2
species Nisaea nitritireducens 248 1
species Nissabacter sp. SGAir0207 109
species Nitratidesulfovibrio oxamicus 5 2
species Nitratidesulfovibrio termitidis 14
species Nitratidesulfovibrio vulgaris 17 51 1 253 25 17 2
species Nitratifractor salsuginis 4 47 1
species Nitratireductor kimnyeongensis 1 1
species Nitratireductor mangrovi 28 2
species Nitratireductor sp. OM-1 68 3 1
species Nitratiruptor sp. SB155-2 1
species Nitratiruptor tergarcus 2 1
species Nitriliruptor alkaliphilus 7 2
species Nitrincola iocasae 2 2
species Nitrincola lacisaponensis 6 1
species Nitritalea halalkaliphila 16
species Nitrobacter hamburgensis 6 14 1
species Nitrobacter winogradskyi 6 9
species Nitrococcus mobilis 57
species Nitrogeniibacter aestuarii 2
species Nitrogeniibacter mangrovi 77 2
species Nitrolancea hollandica 31
species Nitrosococcus halophilus 9 1 1
species Nitrosococcus oceani 3 1 1
species Nitrosococcus wardiae 1
species Nitrosococcus watsonii 729 1 1 1
species Nitrosomonas aestuarii 1
species Nitrosomonas communis 9 1
species Nitrosomonas cryotolerans 1
species Nitrosomonas europaea 3 9 1
species Nitrosomonas eutropha 9 1 1 1
species Nitrosomonas halophila 119 2
species Nitrosomonas nitrosa 8 2
species Nitrosomonas oligotropha 107 1 2
species Nitrosomonas sp. AL212 1
species Nitrosomonas sp. NSW3 1 3
species Nitrosomonas stercoris 1 1
species Nitrosomonas ureae 27 2 1
species Nitrosophilus alvini 1
species Nitrosophilus labii 1
species Nitrosopumilus maritimus 5 8
species Nitrosopumilus piranensis 1 1
species Nitrosopumilus ureiphilus 1
species Nitrososphaera viennensis 1
species Nitrosospira briensis 1
species Nitrosospira multiformis 1 3 1 1
species Nitrospina gracilis 15 16
species Nitrospina watsonii 2
species Nitrospira defluvii 5
species Nitrospira japonica 12 2 1
species Nitrospira moscoviensis 1 7 30 1
species Nitrospira sp. KM1 2
species Nitrospirillum amazonense 5 83 2 2
species Niveibacterium microcysteis 1
species Niveispirillum cyanobacteriorum 92 1
species Niveispirillum fermenti 47
species Niveispirillum irakense 323
species Nocardia acididurans 1
species Nocardia alba 1
species Nocardia alboflava 6
species Nocardia amikacinitolerans 1
species Nocardia arthritidis 32 2
species Nocardia asteroides 12 1 2
species Nocardia brasiliensis 86 1
species Nocardia crassostreae 1
species Nocardia cyriacigeorgica 84 3 2
species Nocardia devorans 4
species Nocardia farcinica 25
species Nocardia huaxiensis 27
species Nocardia iowensis 2
species Nocardia mangyaensis 57 1 2
species Nocardia nova 22 1 2
species Nocardia otitidiscaviarum 29 2
species Nocardia polyresistens 2
species Nocardia roseoalba 16
species Nocardia seriolae 3 28 1 1
species Nocardia sp. CS682 27
species Nocardia terpenica 42 1
species Nocardia thailandica 1
species Nocardia vermiculata 3
species Nocardia yamanashiensis 2
species Nocardia yunnanensis 28 1
species Nocardioidaceae bacterium 9
species Nocardioides aequoreus 15
species Nocardioides albertanoniae 1
species Nocardioides albus 17
species Nocardioides anomalus 7 1
species Nocardioides aquaticus 18
species Nocardioides aromaticivorans 1
species Nocardioides baekrokdamisoli 5 2
species Nocardioides bigeumensis 2
species Nocardioides cynanchi 3 1
species Nocardioides daejeonensis 86
species Nocardioides daphniae 7 11
species Nocardioides dokdonensis 1 10 3
species Nocardioides dubius 25
species Nocardioides euryhalodurans 4
species Nocardioides faecalis 1
species Nocardioides houyundeii 17 1
species Nocardioides humi 13 2
species Nocardioides islandensis 9 1
species Nocardioides jensenii 19
species Nocardioides jishulii 6 1
species Nocardioides korecus 8
species Nocardioides mangrovicus 1
species Nocardioides marinisabuli 5
species Nocardioides marmotae 9 2
species Nocardioides nanhaiensis 3
species Nocardioides nitrophenolicus 1
species Nocardioides ochotonae 1
species Nocardioides oleivorans 36
species Nocardioides pacificus 11
species Nocardioides panacis 2
species Nocardioides pantholopis 6 1
species Nocardioides panzhihuensis 1
species Nocardioides piscis 5
species Nocardioides plantarum 1
species Nocardioides sambongensis 14
species Nocardioides scoriae 11
species Nocardioides seonyuensis 15 1
species Nocardioides sp. B-3 1
species Nocardioides sp. CF8 1
species Nocardioides sp. dk884 8
species Nocardioides sp. HDW12B 13 1
species Nocardioides sp. InS609-2 1 1
species Nocardioides sp. JQ2195 8
species Nocardioides sp. JS614 7 1 1
species Nocardioides sp. Kera G14 1
species Nocardioides sp. S-1144 20
species Nocardioides sp. S5 1
species Nocardioides sp. TF02-7 1
species Nocardioides sp. WS12 10 1
species Nocardioides ungokensis 10 2
species Nocardioides yefusunii 23
species Nocardiopsis alba 24 1 2
species Nocardiopsis algeriensis 2
species Nocardiopsis dassonvillei 46 3 1
species Nocardiopsis exhalans 2
species Nocardiopsis gilva 21 1 2
species Nocardiopsis halotolerans 1
species Nocardiopsis sp. 531F 1
species Nocardiopsis terrae 1
species Nocardiopsis xinjiangensis 1
species Nocardiopsis yanglingensis 7
species Nodularia baltica 610 1
species Nodularia sphaerocarpa 1
species Nodularia spumigena 1 1 3 1
species Nonlabens agnitus 1
species Nonlabens dokdonensis 1 2
species Nonlabens marinus 1
species Nonlabens ponticola 1 1
species Nonlabens sp. Ci31 1 2
species Nonlabens sp. Hel1_33_55 1
species Nonlabens sp. MB-3u-79 3
species Nonlabens sp. MIC269 1 1
species Nonlabens spongiae 7 12 2
species Nonlabens ulvanivorans 1
species Nonomuraea asiatica 4 1
species Nonomuraea ceibae 1
species Nonomuraea coxensis 1
species Nonomuraea ferruginea 1
species Nonomuraea gerenzanensis 46 1 2
species Nonomuraea longicatena 132 11
species Nonomuraea phyllanthi 1
species Nonomuraea polychroma 2 10
species Nonomuraea spiralis 28
species Nordella oligomobilis 1
species Nordella sp. HKS 07 32 1
species Norwalk virus 1
species Nosocomiicoccus ampullae 3 6 2
species Nosocomiicoccus massiliensis 10
species Nostoc carneum 1
species Nostoc edaphicum 2
species Nostoc flagelliforme 497 1 1
species Nostoc linckia 1
species Nostoc piscinale 23 1
species Nostoc punctiforme 1 1
species Nostoc sp. C057 1 1
species Nostoc sp. CENA543 1 2
species Nostoc sp. HK-01 1
species Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' 1 1
species Nostoc sp. MS1 2
species Nostoc sp. NIES-2111 1
species Nostoc sp. NIES-3756 1 1
species Nostoc sp. NIES-4103 4
species Nostoc sp. PCC 7107 1 1
species Nostoc sp. PCC 7120 = FACHB-418 1
species Nostoc sp. PCC 7524 1 1
species Nostoc sp. TCL240-02 1
species Nostoc sp. TCL26-01 1
species Nostoc sp. UHCC 0870 1
species Nostoc sp. UHCC 0926 1
species Nostoc sphaeroides 1 1
species Nostocales cyanobacterium HT-58-2 3
species Nostocoides sp. HKS02 9
species Nostocoides vanveenii 40
species Nostocoides veronense 1 16
species Novacetimonas hansenii 7 1
species Novibacillus thermophilus 11 9 4 2
species Noviherbaspirillum aurantiacum 17
species Noviherbaspirillum malthae 3
species Noviherbaspirillum massiliense 28
species Noviherbaspirillum sp. UKPF54 52 1
species Noviherbaspirillum suwonense 8
species Novispirillum itersonii 163 206
species Novisyntrophococcus fermenticellae 2 3 1
species Novosphingobium acidiphilum 16
species Novosphingobium aquaticum (ex Singh et al. 2015) 1
species Novosphingobium arabidopsis 6
species Novosphingobium aromaticivorans 9 17 1 1
species Novosphingobium capsulatum 33 4
species Novosphingobium chloroacetimidivorans 11
species Novosphingobium decolorationis 1
species Novosphingobium ginsenosidimutans 8 1
species Novosphingobium hassiacum 12
species Novosphingobium indicum 19
species Novosphingobium lentum 4
species Novosphingobium lindaniclasticum 2
species Novosphingobium mathurense 4
species Novosphingobium nitrogenifigens 2 1
species Novosphingobium panipatense 1
species Novosphingobium pentaromativorans 11 1 2
species Novosphingobium resinovorum 24 1
species Novosphingobium sediminicola 1 2
species Novosphingobium sp. ES2-1 1
species Novosphingobium sp. Gsoil 351 2
species Novosphingobium sp. KA1 5 1
species Novosphingobium sp. MD-1 1
species Novosphingobium sp. P6W 27 1 1
species Novosphingobium sp. PP1Y 2
species Novosphingobium sp. THA_AIK7 1
species Novosphingobium sp. THN1 11 1
species Novosphingobium stygium 9 1
species Novosphingobium subterraneum 10 3 1
species Novosphingobium terrae 1
species Novosphingobium yangbajingensis 13
species Numidum massiliense 1
species Obesumbacterium proteus 20 1
species Occallatibacter riparius 2
species Occultella kanbiaonis 19 2
species Oceanibacterium hippocampi 1
species Oceanibaculum pacificum 1
species Oceanicaulis alexandrii 10 3
species Oceanicoccus sagamiensis 54 1 1
species Oceanicola sp. D3 6
species Oceanidesulfovibrio gabonensis 6
species Oceanidesulfovibrio indonesiensis 3
species Oceanidesulfovibrio marinus 5 14 219 1 2
species Oceanihabitans sp. IOP_32 1
species Oceanimonas smirnovii 2
species Oceanimonas sp. GK1 114
species Oceanirhabdus sediminicola 21 4
species Oceanirhabdus sp. W0125-5 2 2
species Oceanisphaera laurenciae 55
species Oceanisphaera litoralis 2
species Oceanisphaera profunda 2
species Oceanispirochaeta crateris 80 2
species Oceanispirochaeta litoralis 11
species Oceanithermus profundus 113 1 2
species Oceanobacillus caeni 27
species Oceanobacillus iheyensis 140 1 4 2
species Oceanobacillus jeddahense 2
species Oceanobacillus kimchii 1
species Oceanobacillus locisalsi 5
species Oceanobacillus luteolus 5
species Oceanobacillus neutriphilus 1
species Oceanobacillus oncorhynchi 2
species Oceanobacillus picturae 1
species Oceanobacillus profundus 1
species Oceanobacillus zhaokaii 2 2
species Oceanobacter kriegii 1
species Oceanospirillum maris 1
species Oceanospirillum multiglobuliferum 4
species Oceanotoga sp. DSM 15011 1 2
species Oceanotoga teriensis 2
species Ochrobactrum quorumnocens 14 1
species Ochrobactrum sp. LC498 2
species Ochrobactrum sp. SCTS14 18
species Ochrobactrum sp. SFR4 1
species Octadecabacter antarcticus 4 1
species Octadecabacter arcticus 5 1 1
species Octadecabacter sp. SW4 9 1
species Octadecabacter temperatus 3 1 2
species Odoribacter denticanis 3081 63 1 6
species Odoribacter laneus 2338 154 45 4 9 4 3 1 5
species Odoribacter sp. 4
species Odoribacter sp. 43_10 4
species Odoribacter sp. AF15-53 1
species Odoribacter sp. AF21-41 2 3
species Odoribacter sp. AM16-33 2 3
species Odoribacter sp. N15.MGS-14 4
species Odoribacter sp. N54.MGS-14 4
species Odoribacter splanchnicus 1111 579 276 34 13 20 26 9 23 10 4 3 1 1
species Odoribacteraceae bacterium 1 3
species Oecophyllibacter saccharovorans 42 1
species Oedogonium crispum 1
species Oengusvirus oengus 112 1
species Oenococcus alcoholitolerans 13
species Oenococcus kitaharae 2 3 1
species Oenococcus oeni 2 2 5 4 2 2
species Oenococcus sicerae 7 2 1
species Oenococcus sp. UCMA 16435 1 1
species Oerskovia ginkgo 5
species Oerskovia sp. KBS0722 26 2
species Ohtaekwangia koreensis 7
species Ohtaekwangia kribbensis 76 2
species Okeania lorea 2
species Olea europaea 1
species Olegusella massiliensis 2
species Oleidesulfovibrio alaskensis 41 199 209 20 14 2
species Oleidesulfovibrio vietnamensis 240 912 2
species Oleiphilus messinensis 3 2 2
species Oleispira antarctica 7 1 1
species Oleomonas sagaranensis 416 1
species Oligella ureolytica 263 30 1
species Oligella urethralis 22 11 2 8 1
species Oligoflexus tunisiensis 1
species Oligosphaera ethanolica 48
species Oliverpabstia intestinalis 2 8 4 1
species Oliverpabstia sp. 4
species Oliverpabstia sp. DFI.9.49 4
species Olivibacter ginsengisoli 158
species Olivibacter sitiensis 19
species Olivibacter soli 846 3
species Olivibacter sp. LS-1 2 3
species Olivibacter sp. SDN3 2
species Olivibacter terrae 191 6
species Olleya aquimaris 2
species Olleya sp. Bg11-27 4 1
species Olleya sp. YS 1 1
species Olsenella profusa 702 3 2
species Olsenella sp. 1 1
species Olsenella sp. 1183 32
species Olsenella sp. AM30-3LB 1
species Olsenella sp. F0004 1
species Olsenella sp. GAM18 261 8 21 1
species Olsenella sp. HMSC062G07 1
species Olsenella sp. Marseille-P4518 1
species Olsenella sp. MSTE5 1
species Olsenella sp. oral taxon 807 238 3 1 2
species Olsenella sp. S9 HS-6 10
species Olsenella timonensis 262 1 1 2
species Olsenella uli 290 160 2 254 5 1 12 2
species Olsenella urininfantis 1
species Oncorhynchus kisutch 1
species Oncorhynchus mykiss 1
species Onion yellows phytoplasma 1
species Onishia taeanensis 5
species Opitutaceae bacterium TAV3 1
species Opitutaceae bacterium TAV5 125 1
species Opitutus sp. GAS368 72 4
species Opitutus terrae 6 10 85 1 2
species Orbus hercynius 5
species Orenia chitinitropha 1
species Orenia salinaria 77
species Orenia sivashensis 1
species Oribacterium asaccharolyticum 407 1 1
species Oribacterium parvum 276 1
species Oribacterium sinus 4166 1364 4 8 7 1
species Oribacterium sp. C9 1
species Oribacterium sp. CM12 16
species Oribacterium sp. OBRC12 4
species Oribacterium sp. oral taxon 108 4
species Oricola thermophila 7 1
species Orientia tsutsugamushi 4 1
species Ornatilinea apprima 9
species Ornithinicoccus hortensis 2
species Ornithinimicrobium avium 22 2 1
species Ornithinimicrobium ciconiae 20 1
species Ornithinimicrobium cryptoxanthini 1
species Ornithinimicrobium faecis 1
species Ornithinimicrobium flavum 32 2
species Ornithinimicrobium pratense 13
species Ornithinimicrobium sp. INDO-MA30-4 1
species Ornithinimicrobium sufpigmenti 11 1
species Ornithobacterium rhinotracheale 5 195 1 4 3
species Orrella dioscoreae 80 2
species Orrella marina 7 1
species Oryza sativa 1
species Oryzomicrobium terrae 43 1
species Oscheius sp. DF5120 1
species Oscheius sp. JU1382 1
species Oscillatoria acuminata 3 2
species Oscillatoria corallinae 1345
species Oscillatoria nigro-viridis 1 2 1 2
species Oscillibacter hominis 1 1 1
species Oscillibacter massiliensis 1 29
species Oscillibacter ruminantium 1327 3 5
species Oscillibacter sp. 1 9 4
species Oscillibacter sp. 1-3 1 1
species Oscillibacter sp. 57_20 4
species Oscillibacter sp. CAG:241 1
species Oscillibacter sp. CAG:241_62_21 3
species Oscillibacter sp. ER4 3 19 3 4 1
species Oscillibacter sp. G2 1 1 15
species Oscillibacter sp. KLE 1728 4
species Oscillibacter sp. KLE 1745 5 4
species Oscillibacter sp. Marseille-P3260 1 1 23
species Oscillibacter sp. MCC667 4 1
species Oscillibacter sp. MSJ-31 4 1
species Oscillibacter sp. PEA192 272 8 3 27 4 1
species Oscillibacter valericigenes 516 115 271 14 3 21 3 7 4 1
species Oscillochloris trichoides 1
species Oscillospira guilliermondii 4093 2 128 2 2 7 2 1
species Oscillospiraceae bacterium 1 1 1 4
species Oscillospiraceae bacterium AIP232.11 1
species Oscillospiraceae bacterium Marseille-Q3528 4
species Oscillospiraceae bacterium MH27-1 4
species Oscillospiraceae bacterium MH27-2 4
species Oscillospiraceae bacterium SCCA1 4
species Oscillospiraceae bacterium VE202-24 27 4
species Ostreococcus sp. 'lucimarinus' 2
species Otariodibacter oris 35 7 1
species Ottowia oryzae 29
species Ottowia sp. oral taxon 894 52 3 2
species Ottowia testudinis 2
species Owenweeksia hongkongensis 3 1 1
species Oxalobacter aliiformigenes 1 2
species Oxalobacter formigenes 1569 381 181 13 6 2 23 4 5 6 4 1 2 2
species Oxalobacter paraformigenes 1
species Oxalobacter vibrioformis 1330 7 3 2
species Oxalophagus oxalicus 89
species Oxobacter pfennigii 361
species Oxynema aestuarii 2 1
species Oxynema thaianum 6
species Pacificimonas flava 1
species Pacificitalea manganoxidans 5 1 1
species Paecilomyces variotii 2 1
species Paenacidovorax caeni 6
species Paenacidovorax monticola 1
species Paenalkalicoccus suaedae 9 2
species Paenarthrobacter aurescens 2 1
species Paenarthrobacter ilicis 1
species Paenibacillaceae bacterium GAS479 147 1
species Paenibacillus abekawaensis 2
species Paenibacillus aestuarii 2
species Paenibacillus agaridevorans 2 2
species Paenibacillus albicereus 163 2 2
species Paenibacillus albus 126 1 1 2
species Paenibacillus algicola 153 2
species Paenibacillus alginolyticus 2
species Paenibacillus alkaliterrae 1
species Paenibacillus alvei 59 133
species Paenibacillus amylolyticus 1
species Paenibacillus anaericanus 2
species Paenibacillus antarcticus 52 1 1 2
species Paenibacillus apiarius 1 9
species Paenibacillus azoreducens 1 2 2
species Paenibacillus baekrokdamisoli 49 4 2
species Paenibacillus barcinonensis 65 1 2
species Paenibacillus barengoltzii 1
species Paenibacillus beijingensis 2 159 1 1 2
species Paenibacillus borealis 169 1 3 2
species Paenibacillus bovis 205 1 3 2
species Paenibacillus brasilensis 5 53 2 1 1 1
species Paenibacillus caespitis 2
species Paenibacillus castaneae 10
species Paenibacillus cellulosilyticus 126 2
species Paenibacillus cellulositrophicus 1 196 1 1
species Paenibacillus chartarius 65
species Paenibacillus chibensis 4
species Paenibacillus chinjuensis 32
species Paenibacillus chitinolyticus 8 220 1 5 2
species Paenibacillus contaminans 12 5 2 1
species Paenibacillus crassostreae 63 2
species Paenibacillus curdlanolyticus 1
species Paenibacillus daejeonensis 1
species Paenibacillus dakarensis 1
species Paenibacillus darangshiensis 3
species Paenibacillus dendritiformis 4 2
species Paenibacillus donghaensis 6 209 1 1 2
species Paenibacillus doosanensis 44
species Paenibacillus durus 230 1 1 2
species Paenibacillus edaphicus 113
species Paenibacillus elgii 2
species Paenibacillus filicis 342 2 1
species Paenibacillus fonticola 2
species Paenibacillus forsythiae 2
species Paenibacillus fujiensis 1
species Paenibacillus gansuensis 16 3
species Paenibacillus ginsengagri 14
species Paenibacillus ginsengarvi 13
species Paenibacillus glacialis 2
species Paenibacillus glucanolyticus 5
species Paenibacillus graminis 7 124 1 2 2
species Paenibacillus granivorans 4
species Paenibacillus guangzhouensis 69 1 2
species Paenibacillus harenae 3
species Paenibacillus hexagrammi 2
species Paenibacillus hordei 2
species Paenibacillus hunanensis 2 1
species Paenibacillus ihbetae 199 1 2
species Paenibacillus illinoisensis 1
species Paenibacillus jilunlii 5 65 1 2
species Paenibacillus kobensis 7 1
species Paenibacillus koleovorans 1
species Paenibacillus konsidensis 1
species Paenibacillus koreensis 2 3
species Paenibacillus kribbensis 45 1 1
species Paenibacillus larvae 195 1 1 2
species Paenibacillus lautus 53 2
species Paenibacillus lentus 101 1 2
species Paenibacillus lutimineralis 155 1 2
species Paenibacillus lycopersici 183 1 2
species Paenibacillus macerans 1 2
species Paenibacillus massiliensis 1
species Paenibacillus mesophilus 1
species Paenibacillus motobuensis 2
species Paenibacillus mucilaginosus 552 5 238 1 1 2
species Paenibacillus nanensis 6
species Paenibacillus naphthalenovorans 152 2
species Paenibacillus nicotianae 6
species Paenibacillus oceanisediminis 1
species Paenibacillus odorifer 6 140 3 2 1
species Paenibacillus ourofinensis 158 1
species Paenibacillus pabuli 2
species Paenibacillus pectinilyticus 4
species Paenibacillus peoriae 1
species Paenibacillus phyllosphaerae 4
species Paenibacillus physcomitrellae 4 186 1 4
species Paenibacillus pini 1
species Paenibacillus pinihumi 3
species Paenibacillus pocheonensis 1
species Paenibacillus polygoni 1
species Paenibacillus polymyxa 239 1 5 2 1
species Paenibacillus protaetiae 176 1 1 2
species Paenibacillus psychroresistens 95 1 2
species Paenibacillus qingshengii 40
species Paenibacillus quercus 1
species Paenibacillus residui 5
species Paenibacillus rhizoryzae 1
species Paenibacillus rhizovicinus 132 2
species Paenibacillus rigui 4 1
species Paenibacillus riograndensis 1 112 1 2
species Paenibacillus ruminocola 1
species Paenibacillus sabinae 13 125 1 2
species Paenibacillus sanguinis 9
species Paenibacillus selenii 4
species Paenibacillus senegalensis 4
species Paenibacillus sepulcri 1 17
species Paenibacillus shirakamiensis 1
species Paenibacillus siamensis 121
species Paenibacillus soli 31
species Paenibacillus sonchi 2
species Paenibacillus sophorae 1 2
species Paenibacillus sp. 1182 1
species Paenibacillus sp. 32O-W 133 3 2 1
species Paenibacillus sp. 37 16
species Paenibacillus sp. 481 2
species Paenibacillus sp. B01 196 1 2
species Paenibacillus sp. BIHB 4019 175 4 2
species Paenibacillus sp. CAA11 185 4 2
species Paenibacillus sp. Cedars 1 2
species Paenibacillus sp. DCT19 101 1 2
species Paenibacillus sp. E222 146 1
species Paenibacillus sp. FSL H7-0357 219 3 2
species Paenibacillus sp. FSL H7-0737 86 2 2
species Paenibacillus sp. FSL P4-0081 54 4 2
species Paenibacillus sp. FSL R5-0345 31 4 2
species Paenibacillus sp. FSL R5-0912 131 4 2
species Paenibacillus sp. FSL R7-0273 194 4 2
species Paenibacillus sp. FSL R7-0331 221 1 2
species Paenibacillus sp. G2S3 1
species Paenibacillus sp. H1-7 1 2
species Paenibacillus sp. IHB B 3084 30 1 1
species Paenibacillus sp. IHBB 10380 75 1 2
species Paenibacillus sp. JDR-2 177 2 2
species Paenibacillus sp. JNUCC-31 2
species Paenibacillus sp. JZ16 2
species Paenibacillus sp. MBLB1234 4
species Paenibacillus sp. N3/727 2
species Paenibacillus sp. PAMC21692 1 2
species Paenibacillus sp. PK1-4R 1
species Paenibacillus sp. PK3_47 1 2
species Paenibacillus sp. R14(2021) 2
species Paenibacillus sp. RUD330 198 5 2
species Paenibacillus sp. sptzw28 2 2
species Paenibacillus sp. URB8-2 138 1 2
species Paenibacillus sp. Y412MC10 23 1 2
species Paenibacillus sp. YPG26 2
species Paenibacillus spongiae 1 2
species Paenibacillus stellifer 1 2 212 1 4 2
species Paenibacillus swuensis 104 2
species Paenibacillus taiwanensis 14
species Paenibacillus tarimensis 4
species Paenibacillus terrae 88 1 2 2
species Paenibacillus thailandensis 8
species Paenibacillus thermoaerophilus 5
species Paenibacillus thiaminolyticus 156 1 1 2
species Paenibacillus tianjinensis 1 2
species Paenibacillus tianmuensis 10
species Paenibacillus tritici 1 2
species Paenibacillus turpanensis 1
species Paenibacillus typhae 159
species Paenibacillus uliginis 133 1
species Paenibacillus urinalis 2
species Paenibacillus validus 356
species Paenibacillus vortex 5
species Paenibacillus woosongensis 1
species Paenibacillus xylanexedens 27 2
species Paenibacillus xylanilyticus 135 1 1 2
species Paenibacillus yonginensis 150 2
species Paeniglutamicibacter sp. Y32M11 1 1
species Paenimyroides anatoliense 11
species Paenimyroides aquimaris 4
species Paenimyroides ceti 1
species Paenimyroides ummariense 2
species Paeniroseomonas aquatica 4 1
species Paenisporosarcina antarctica 19 2
species Paenisporosarcina cavernae 10 2 2
species Paenisporosarcina macmurdoensis 126
species Paenisporosarcina quisquiliarum 69
species Paenisporosarcina sp. 4
species Pahexavirus kubed 1
species Pahexavirus mrAK 1
species Pahexavirus ouroboros 1
species Pahexavirus P1001 1
species Pahexavirus P11 1
species Pahexavirus P144 1
species Pahexavirus P91 1
species Pahexavirus PA6 1
species Pahexavirus PAD20 1
species Pahexavirus PHL009M11 1
species Pahexavirus PHL025M00 1
species Pahexavirus PHL041M10 1
species Pahexavirus PHL095N00 1
species Pahexavirus PHL113M01 1
species Pahexavirus PHL141N00 1
species Pahexavirus PHL179M00 1
species Pahexavirus SKKY 1
species Pahexavirus solid 1
species Pahexavirus wizzo 1
species Palaeococcus pacificus 1 1
species Palleronia sp. THAF1 12
species Palmaria palmata 1
species Palpitomonas bilix 1
species Paludibacter propionicigenes 155 239 1 5 3
species Paludibacterium paludis 2 2
species Paludibacterium sp. B53371 1 2
species Paludibacterium yongneupense 3 2
species Paludibaculum fermentans 10 1 2
species Paludisphaera borealis 71 2 2
species Panacagrimonas perspica 4
species Panacibacter ginsenosidivorans 30 1 2
species Pandoraea apista 4 25 2
species Pandoraea commovens 1
species Pandoraea faecigallinarum 36
species Pandoraea fibrosis 14
species Pandoraea norimbergensis 10 1
species Pandoraea nosoerga 1
species Pandoraea oxalativorans 7 1
species Pandoraea pnomenusa 129
species Pandoraea pulmonicola 28
species Pandoraea sp. XY-2 36 3 1
species Pandoraea sputorum 17
species Pandoraea thiooxydans 39 1
species Pandoraea vervacti 11
species Pandorina colemaniae 1
species Pankowvirus pv1717 1
species Pannonibacter indicus 3
species Pannonibacter phragmitetus 132 3 1
species Pantoea agglomerans 86 101 3 1 2
species Pantoea alhagi 21 1 1
species Pantoea ananatis 86 1 2
species Pantoea cypripedii 55 27
species Pantoea deleyi 1
species Pantoea dispersa 2 1 83 1 2
species Pantoea eucalypti 2 1
species Pantoea eucrina 1
species Pantoea phytobeneficialis 12
species Pantoea rwandensis 17
species Pantoea sp. 3
species Pantoea sp. 201603H 26
species Pantoea sp. At-9b 51 2
species Pantoea sp. CCBC3-3-1 28 2
species Pantoea sp. CWB304 2 52
species Pantoea sp. PSNIH1 23 1
species Pantoea sp. PSNIH2 3
species Pantoea sp. SO10 20
species Pantoea stewartii 70 35 1 2
species Pantoea vagans 5 149 1 2
species Papillibacter cinnamivorans 829 3 13 9 4 1
species Parabacteroides acidifaciens 1 1 1
species Parabacteroides bouchesdurhonensis 1
species Parabacteroides chinchillae 685 2 2 1 1
species Parabacteroides distasonis 4382 1422 662 276 31 23 27 32 9 17 10 7 4 4 3 2 1 1
species Parabacteroides faecis 585 33 1 2 1 3 3
species Parabacteroides goldsteinii 4503 712 181 25 5 5 16 3 1 3 6 3 3 1 1
species Parabacteroides gordonii 687 104 58 1 4 8 2 7 2 2
species Parabacteroides johnsonii 3855 494 106 57 4 14 2 4 7 7 3 1
species Parabacteroides massiliensis 3 1
species Parabacteroides merdae 4310 1195 500 158 34 2 22 19 1 15 11 2 3 1
species Parabacteroides phage YZ-2015a 4
species Parabacteroides phage YZ-2015b 69
species Parabacteroides segnis 3
species Parabacteroides sp. 1 1 2 4
species Parabacteroides sp. 2_1_7 4
species Parabacteroides sp. 20_3 5 9 4
species Parabacteroides sp. AF17-3 3
species Parabacteroides sp. AF19-14 4
species Parabacteroides sp. AF21-43 4
species Parabacteroides sp. AF27-14 4
species Parabacteroides sp. AF39-10AC 2 4
species Parabacteroides sp. AM17-47 4
species Parabacteroides sp. AM18-12LB 4
species Parabacteroides sp. AM25-14 4
species Parabacteroides sp. AM27-42 4
species Parabacteroides sp. AM44-16 2 4
species Parabacteroides sp. AM58-2XD 3
species Parabacteroides sp. ASF519 1 3
species Parabacteroides sp. AT13 4
species Parabacteroides sp. B2-Q-110 4
species Parabacteroides sp. B2-S-102 4
species Parabacteroides sp. CAG:2 4
species Parabacteroides sp. CH2-D42-20 4
species Parabacteroides sp. CT06 267 8 1 30 4 2
species Parabacteroides sp. D13 5 1 9 4
species Parabacteroides sp. D25 60 4 4
species Parabacteroides sp. D26 2 4
species Parabacteroides sp. DJF_B084 1
species Parabacteroides sp. DJF_B086 1
species Parabacteroides sp. dnLKV18 1
species Parabacteroides sp. dnLKV8 70 1
species Parabacteroides sp. J1502 21 1
species Parabacteroides sp. MSK.9.14 2
species Parabacteroides sp. OF01-14 4
species Parabacteroides sp. OF04-13BH 2 4
species Parabacteroides sp. P14 3
species Parabacteroides sp. S448 1
species Parabacteroides sp. S449 1
species Parabacteroides sp. TA-V-105 3
species Parabacteroides sp. UBA1708 4
species Parabacteroides sp. UBA3278 4
species Parabacteroides sp. UBA7107 3
species Parabacteroides sp. W1-Q-101 3
species Parabacteroides sp. Y3-G-102 4
species Parabacteroides timonensis 4
species Parablautia sp. Marseille-Q6255 1
species Paraburkholderia acidipaludis 2
species Paraburkholderia acidiphila 51 1
species Paraburkholderia acidisoli 27
species Paraburkholderia aromaticivorans 84
species Paraburkholderia aspalathi 24
species Paraburkholderia atlantica 20
species Paraburkholderia caffeinilytica 11 1
species Paraburkholderia caledonica 29 1
species Paraburkholderia caribensis 42 1
species Paraburkholderia dioscoreae 12
species Paraburkholderia dokdonensis 16
species Paraburkholderia edwinii 1
species Paraburkholderia fungorum 22 37 2 1
species Paraburkholderia graminis 3
species Paraburkholderia hospita 11 1
species Paraburkholderia kururiensis 239 3 1
species Paraburkholderia megapolitana 27 1
species Paraburkholderia nodosa 2
species Paraburkholderia oxyphila 6
species Paraburkholderia pallida 40 1
species Paraburkholderia phenoliruptrix 915 1 39 1 1 1 1
species Paraburkholderia phymatum 24 1 1
species Paraburkholderia phytofirmans 18 52 1 2
species Paraburkholderia sabiae 1
species Paraburkholderia sartisoli 17
species Paraburkholderia sediminicola 8
species Paraburkholderia solisilvae 5
species Paraburkholderia sp. D15 1
species Paraburkholderia sp. PGU16 12 1
species Paraburkholderia sp. PGU19 6
species Paraburkholderia sp. SOS3 23 2 1
species Paraburkholderia sprentiae 34 1 1
species Paraburkholderia susongensis 1
species Paraburkholderia terrae 5
species Paraburkholderia terricola 15 3
species Paraburkholderia tropica 1
species Paraburkholderia tuberum 1
species Paraburkholderia ultramafica 6
species Paraburkholderia xenovorans 7 1 1
species Parachlamydia acanthamoebae 3 1 1 2
species Paracholeplasma brassicae 30 43 1 2 2 1
species Paracholeplasma vituli 772 1
species Paracidovorax anthurii 5 4
species Paracidovorax avenae 78 3
species Paracidovorax cattleyae 7
species Paracidovorax citrulli 5
species Paracidovorax konjaci 10
species Paracidovorax valerianellae 11
species Paraclostridium bifermentans 44 246 29 22 1 2
species Paraclostridium ghonii 1
species Paraclostridium sordellii 4 254 10 25 2
species Paraclostridium tenue 103 1
species Paracoccaceae bacterium 121 1
species Paracoccus alcaliphilus 2
species Paracoccus aminophilus 6 14 1 1
species Paracoccus aminovorans 11 16
species Paracoccus carotinifaciens 4
species Paracoccus chinensis 9
species Paracoccus contaminans 23 1
species Paracoccus denitrificans 5 11 1
species Paracoccus everestensis 1
species Paracoccus fistulariae 1
species Paracoccus halophilus 2
species Paracoccus hibiscisoli 1
species Paracoccus homiensis 3
species Paracoccus jeotgali 13 1
species Paracoccus kamogawaensis 17
species Paracoccus kondratievae 32
species Paracoccus koreensis 3
species Paracoccus liaowanqingii 27 1
species Paracoccus limosus 3
species Paracoccus marcusii 17 1
species Paracoccus marinus 6
species Paracoccus methylarcula 32
species Paracoccus methylovorus 1
species Paracoccus mutanolyticus 5
species Paracoccus niistensis 1
species Paracoccus pantotrophus 23
species Paracoccus saliphilus 1 1 1
species Paracoccus sanguinis 13 1
species Paracoccus sediminicola 1
species Paracoccus sediminis 2
species Paracoccus seriniphilus 5
species Paracoccus solventivorans 1
species Paracoccus sp. AK26 34 1 2
species Paracoccus sp. Arc7-R13 54 1
species Paracoccus sp. MC1862 1
species Paracoccus sp. PAMC 22219 1
species Paracoccus stylophorae 1 1
species Paracoccus sulfuroxidans 4
species Paracoccus suum 21 1
species Paracoccus tegillarcae 13 1
species Paracoccus thiocyanatus 1
species Paracoccus versutus 1
species Paracoccus yeei 1 1 23 1
species Paracoccus zhejiangensis 22
species Paracrocinitomix mangrovi 2
species Paradesulfitobacterium aromaticivorans 130
species Paradesulfitobacterium ferrireducens 1
species Paradevosia shaoguanensis 2
species Paraeggerthella hongkongensis 236 15 3 1
species Paraeggerthella sp. SNR40-432 4
species Parafannyhessea umbonata 96 262 1 3
species Paraferrimonas sedimenticola 2
species Parafilimonas terrae 129
species Paraflavitalea soli 1 4 2
species Parafrankia sp. EAN1pec 5 3
species Parageobacillus caldoxylosilyticus 2
species Parageobacillus sp. KH3-4 2
species Parageobacillus thermoglucosidasius 110 2
species Parageobacillus toebii 166 20 2
species Paraglaciecola arctica 3
species Paraglaciecola chathamensis 1
species Paraglaciecola hydrolytica 1
species Paraglaciecola mesophila 2
species Paraglaciecola psychrophila 1
species Paraglaciecola sp. L1A13 1
species Paraglaciecola sp. L3A3 1
species Paralcaligenes sp. KSB-10 2
species Paralcaligenes ureilyticus 1
species Paraliobacillus ryukyuensis 1
species Paraliobacillus zengyii 17 3 2
species Paramagnetospirillum magneticum 57 1 1
species Paramagnetospirillum magnetotacticum 1
species Paramaledivibacter caminithermalis 3
species Paramecium bursaria Chlorella virus 1 1
species Paramecium tetraurelia 1
species Paramicrobacterium chengjingii 2
species Paramixta manurensis 16
species Paramuribaculum sp. 1
species Paraneptunicella aestuarii 1 2
species Paraoerskovia marina 18 2
species Parapedobacter composti 7
species Parapedobacter koreensis 1770 1 1
species Parapedobacter soli 1
species Paraphaeosphaeria sporulosa 1
species Paraprevotella clara 3327 998 174 69 9 3 8 6 4 2 2 6 3 3 1
species Paraprevotella sp. 3
species Paraprevotella xylaniphila 548 246 8 273 10 3 7 32 2 3
species Pararhodospirillum photometricum 57 1 2
species Parasaccharibacter apium 12 1
species Parascardovia denticolens 4 160 1 2
species Parasedimentitalea marina 11 1
species Parasegetibacter luojiensis 6
species Parashewanella spongiae 8 3 1
species Parashewanella tropica 1 2
species Parasphaerochaeta coccoides 6 3 95 1 2
species Parasphingopyxis algicola 16
species Parasphingopyxis lamellibrachiae 2
species Parasphingopyxis sp. CP4 1
species Parasphingorhabdus cellanae 1
species Parasphingorhabdus flavimaris 1
species Parasphingorhabdus halotolerans 18
species Parasphingorhabdus pacifica 6
species Parasporobacterium paucivorans 560 93 3 6
species Parastrongyloides trichosuri 1
species Parasutterella excrementihominis 1239 545 66 8 14 23 7 2 6 4 1
species Parasutterella secunda 490 2 1
species Parasutterella sp. 2 4
species Paratractidigestivibacter faecalis 1
species Paraurantiacibacter namhicola 13
species Parazoarcus communis 192 1 1 1
species Parechovirus A 3
species Paremcibacter congregatus 21 1
species Paroceanicella profunda 2
species Parolsenella catena 258 1 1 2
species Parolsenella massiliensis 263 1 1
species Parvibacter caecicola 218 77 2 1 2
species Parvibaculum lavamentivorans 2 12 2
species Parvicella tangerina 2
species Parvimonas micra 309 42 255 3 5 1 1 3 2
species Parvimonas parva 1
species Parvimonas sp. KA00067 1
species Parvimonas sp. oral taxon 110 2
species Parvimonas sp. oral taxon 393 3
species Parvularcula bermudensis 1 1
species Parvularcula dongshanensis 25
species Parvularcula oceani 1
species Pasteurella atlantica 2
species Pasteurella bettyae 19 1
species Pasteurella canis 1
species Pasteurella dagmatis 1 1
species Pasteurella langaaensis 1
species Pasteurella multocida 13 199 1 4 2
species Pasteurella oralis 2
species Pasteurella skyensis 4
species Pasteurella stomatis 1
species Pasteurella testudinis 19
species Pasteurellaceae bacterium Orientalotternb1 2
species Pasteurellaceae bacterium RH1A 37 1
species Pasteuria nishizawae 217
species Patulibacter americanus 4 5
species Patulibacter medicamentivorans 2
species Patulibacter minatonensis 1
species Paucibacter sp. 186 1
species Paucibacter sp. KCTC 42545 73 1 1
species Paucidesulfovibrio gracilis 2
species Paucidesulfovibrio longus 8
species Paucilactobacillus hokkaidonensis 14 2 2
species Paucilactobacillus nenjiangensis 7 7 2
species Paucilactobacillus oligofermentans 32 149 1 2
species Paucilactobacillus suebicus 13 1
species Paucilactobacillus vaccinostercus 4 235
species Paucimonas lemoignei 8 2
species Paulinella longichromatophora 1
species Paulinella micropora 1
species Pauljensenia hongkongensis 169 1 1
species Pectinatus brassicae 175
species Pectinatus cerevisiiphilus 3967 48 1 7
species Pectinatus frisingensis 179 1 1 3
species Pectinatus haikarae 8 29 1
species Pectinatus sottacetonis 19 1
species Pectobacterium actinidiae 1
species Pectobacterium aroidearum 1
species Pectobacterium atrosepticum 16 1
species Pectobacterium brasiliense 1 1 1
species Pectobacterium carotovorum 84 1 87 4 2
species Pectobacterium parmentieri 39 2 1
species Pectobacterium parvum 1
species Pectobacterium polaris 9
species Pectobacterium punjabense 11
species Pectobacterium quasiaquaticum 1
species Pectobacterium versatile 13 1
species Pectobacterium wasabiae 5 1
species Pedinophyceae sp. YPF-701 1
species Pediococcus acidilactici 82 3 1 91 1 1 2 1
species Pediococcus argentinicus 367 106 7 1
species Pediococcus cellicola 159 2 1
species Pediococcus claussenii 15 7 2
species Pediococcus damnosus 2 10 12 2
species Pediococcus ethanolidurans 4 6
species Pediococcus inopinatus 7 5 4 2 2
species Pediococcus parvulus 17 7 4
species Pediococcus pentosaceus 30 10 96 1 2
species Pediococcus siamensis 13 73
species Pediococcus sp. 3107O2 9
species Pediococcus sp. MFC1 3
species Pediococcus sp. S18 2
species Pediococcus stilesii 68
species Pedobacter aquae 9 2
species Pedobacter aquatilis 255 82
species Pedobacter arcticus 1
species Pedobacter cryoconitis 4 85 3 2
species Pedobacter daejeonensis 148 52 2
species Pedobacter endophyticus 1 2
species Pedobacter gandavensis 2
species Pedobacter ginsengisoli 1 2 58 2
species Pedobacter ginsengiterrae 5
species Pedobacter glucosidilyticus 41 2
species Pedobacter hainanensis 9
species Pedobacter hartonius 4
species Pedobacter heparinus 61 1 5 2
species Pedobacter himalayensis 3 1
species Pedobacter insulae 1
species Pedobacter jejuensis 1
species Pedobacter kribbensis 1
species Pedobacter kwangyangensis 1876 1 2
species Pedobacter lotistagni 1
species Pedobacter metabolipauper 1
species Pedobacter mucosus 2
species Pedobacter nyackensis 1
species Pedobacter panaciterrae 6
species Pedobacter pituitosus 56
species Pedobacter rhizosphaerae 1
species Pedobacter riviphilus 1 1
species Pedobacter rivuli 35
species Pedobacter roseus 1 2
species Pedobacter schmidteae 50 1 2
species Pedobacter silvilitoris 1
species Pedobacter sp. 2
species Pedobacter sp. D749 1
species Pedobacter sp. G11 22 3
species Pedobacter sp. HDW13 24 3
species Pedobacter sp. HMWF019 1
species Pedobacter sp. KBS0701 9 2
species Pedobacter sp. PACM 27299 50 1 1
species Pedobacter steynii 25 1 2
species Pedobacter suwonensis 42
species Pedobacter terricola 2
species Pedococcus aerophilus 2
species Pedococcus bigeumensis 1
species Pedococcus dokdonensis 4
species Pedomicrobium americanum 1
species Pedomicrobium australicum 3 2
species Pedomicrobium ferrugineum 80
species Pedomicrobium manganicum 10 1
species Peduovirinae sp. ctyQn5 1
species Pelagerythrobacter marensis 5 2
species Pelagibacterium halotolerans 22 1
species Pelagibius litoralis 3
species Pelagicoccus albus 2
species Pelagicoccus croceus 623 64 1
species Pelagicoccus litoralis 14 4
species Pelagicoccus mobilis 26
species Pelagovum pacificum 1
species Pelistega indica 8 1
species Pelistega ratti 3 2
species Pelobacter propionicus 2 145 1 2
species Pelobacter seleniigenes 2
species Pelodictyon luteolum 65 1 2
species Pelodictyon phaeoclathratiforme 8 1 2
species Pelolinea submarina 13 130 1 2
species Pelomonas aquatica 16 6
species Pelomonas sp. Root1444 1
species Pelosinus defluvii 90
species Pelosinus fermentans 369 138 4 2
species Pelosinus sp. UFO1 148 3 2
species Pelospora glutarica 100
species Pelotalea chapellei 1
species Pelotomaculum isophthalicicum 1745 2
species Pelotomaculum propionicicum 11
species Pelotomaculum schinkii 2
species Pelotomaculum terephthalicicum 4
species Pelotomaculum thermopropionicum 43 176
species Peltaster fructicola 6
species Penaeicola halotolerans 1
species Penicilliopsis zonata 2
species Penicillium arizonense 2
species Penicillium citrinum 2
species Penicillium digitatum 2
species Penicillium expansum 3
species Penicillium fructuariae-cellae 1
species Penicillium roqueforti 1
species Penicillium rubens 5 1
species Peptacetobacter hiranonis 156 168 258 2 1 3
species Peptoanaerobacter stomatis 4
species Peptoclostridium acidaminophilum 31 224 1 2 2
species Peptoclostridium litorale 37
species Peptococcus niger 4568 609 16 62 4 7 1 1
species Peptococcus simiae 1
species Peptococcus sp. canine oral taxon 334 14 1
species Peptococcus sp. oral taxon 168 1
species Peptococcus sp. S9 B-15 8
species Peptococcus sp. S9 Pr-12 63
species Peptoniphilaceae bacterium 1 1
species Peptoniphilus asaccharolyticus 1749 7 23 1
species Peptoniphilus duerdenii 265 11 1
species Peptoniphilus equinus 1 2
species Peptoniphilus gorbachii 18 3 2
species Peptoniphilus grossensis 3
species Peptoniphilus harei 345 2 260 3 2
species Peptoniphilus indolicus 390 41 1
species Peptoniphilus koenoeneniae 243 7 2
species Peptoniphilus lacrimalis 740 356 164 10 2
species Peptoniphilus methioninivorax 3259 79 1 5
species Peptoniphilus obesi 1015 1 1
species Peptoniphilus olsenii 96 46 4
species Peptoniphilus senegalensis 10 1
species Peptoniphilus sp. 1-14 178
species Peptoniphilus sp. 2002-2300004 20
species Peptoniphilus sp. 2002-38328 170
species Peptoniphilus sp. 7-2 2 24
species Peptoniphilus sp. BV3AC2 68
species Peptoniphilus sp. DNF00192 34
species Peptoniphilus sp. DNF00840 3
species Peptoniphilus sp. gpac018A 2 238
species Peptoniphilus sp. gpac055 1
species Peptoniphilus sp. gpac148 31 1
species Peptoniphilus sp. ING2-D1G 248 1
species Peptoniphilus sp. JCM 8143 22
species Peptoniphilus sp. oral taxon 375 77
species Peptoniphilus sp. oral taxon 836 2 18
species Peptoniphilus sp. S3PFAA2-10 1
species Peptoniphilus sp. S4-13 4
species Peptoniphilus sp. S4-14 1
species Peptoniphilus sp. S4-A10 47
species Peptoniphilus sp. S7MS8 2
species Peptoniphilus sp. S9 AA1-4 6
species Peptoniphilus sp. S9 PR-13 100 1
species Peptoniphilus sp. SAHP1 1 2
species Peptoniphilus stercorisuis 58
species Peptoniphilus timonensis 121
species Peptoniphilus tyrrelliae 15 4 1 1
species Peptostreptococcaceae bacterium 4
species Peptostreptococcaceae bacterium oral taxon 929 252 1 1
species Peptostreptococcaceae bacterium TM5 2
species Peptostreptococcus anaerobius 442 193 105 73 1 1 2 3 1 1
species Peptostreptococcus canis 72
species Peptostreptococcus russellii 364 2 1
species Peptostreptococcus sp. 1
species Peptostreptococcus sp. MV1 5
species Peptostreptococcus stomatis 851 263 102 1 2 2
Species percolatus 378
species Peredibacter starrii 15
species Perexilibacter aurantiacus 48
species Peribacillus asahii 78 3 2
species Peribacillus butanolivorans 16 5 3 2
species Peribacillus frigoritolerans 1 2
species Peribacillus huizhouensis 4
species Peribacillus muralis 5 2 2
species Peribacillus psychrosaccharolyticus 30 2 1
species Peribacillus simplex 1 36 40 1 2
species Periphykon beckeri 1
species Peristeroidobacter agariperforans 1
species Periweissella cryptocerci 4 1 1
species Periwinkle leaf yellowing phytoplasma 1
species Perlucidibaca piscinae 3
species Permianibacter aggregans 42 4 2
species Persephonella marina 2 3 1 2
species Persicimonas caeni 108 2
species Persicirhabdus sediminis 49 2
species Persicitalea jodogahamensis 75 2 1
species Persicobacter diffluens 2 3 2
species Persicobacter psychrovividus 6 8
species Persicobacter sp. JZB09 1 4 2
species Peterkaempfera bronchialis 82 2
species Peteryoungia desertarenae 2 2
species Petrimonas mucosa 252 1 4 3
species Petrimonas sp. IBARAKI 211
species Petrimonas sulfuriphila 46
species Petrocella atlantisensis 260 1 3 3
species Petroclostridium xylanilyticum 1
species Petrotoga mobilis 1 1 2
species Phaeobacter gallaeciensis 2 1 59 1 1 1
species Phaeobacter inhibens 1 29 1
species Phaeobacter piscinae 2
species Phaeobacter porticola 2
species Phaeobacter sp. LSS9 3
species Phaeobacterium nitratireducens 15
species Phaeochromatium fluminis 14
species Phaeocystidibacter luteus 8
species Phaeocystidibacter marisrubri 1
species Phaeodactylibacter luteus 3
species Phaeodactylibacter xiamenensis 5
species Phaeodactylum tricornutum 1
species Phaffia rhodozyma 1
species Phage 203 4
species Phage DP-2017a 6
species Phage sp. ctcqm2 1
species Phage sp. ctIHi3 1
species Phakopsora pachyrhizi 1
species Phanerochaete carnosa 1
species Phascolarctobacterium faecium 3057 1154 400 270 38 2 8 30 6 3 3 1 1
species Phascolarctobacterium sp. 1 4
species Phascolarctobacterium sp. 377 58 4
species Phascolarctobacterium sp. CAG:207 11 4 3
species Phascolarctobacterium sp. CAG:266 1 1
species Phascolarctobacterium sp. canine oral taxon 149 10 1 1
species Phascolarctobacterium sp. canine oral taxon 212 6
species Phascolarctobacterium sp. ET69 1
species Phascolarctobacterium sp. Marseille-Q4147 1 1
species Phascolarctobacterium succinatutens 3608 561 87 9 1 4 5 6 7 1 1
species Phaseolibacter flectens 15
species Phenylobacterium conjunctum 4
species Phenylobacterium falsum 2 49 1
species Phenylobacterium koreense 7 5 1
species Phenylobacterium lituiforme 53
species Phenylobacterium mobile 88 1
species Phenylobacterium montanum 1
species Phenylobacterium parvum 14
species Phenylobacterium sp. LH3H17 2
species Phenylobacterium zucineum 31 3
species Phlebiopsis gigantea 1
species Phnomibacter ginsenosidimutans 25 2
species Phocaeicola abscessus 340 1 2 5
species Phocaeicola barnesiae 370 1375 1 1 3 1 3 2 2
species Phocaeicola coprocola 2576 1282 62 12 1 2 5 3 4 1 1
species Phocaeicola coprophilus 1220 1103 21 8 1 5 2 2 1 1 3 1
species Phocaeicola dorei 4525 1442 541 286 33 15 30 30 9 20 10 7 4 3 1
species Phocaeicola massiliensis 3747 1293 281 97 5 5 20 8 12 6 7 2 1
species Phocaeicola paurosaccharolyticus 4546 1276 3 3 5 7
species Phocaeicola plebeius 2702 1253 94 16 3 3 6 4 3 8 1 2 1 2 1
species Phocaeicola salanitronis 3661 1087 274 11 3 31 3 2 3
species Phocaeicola sartorii 4474 1155 4 26 6 3 18 7 7 1
species Phocaeicola sp. 3
species Phocaeicola vulgatus 4632 1513 675 284 54 29 29 30 9 17 10 7 6 3 3 1 1
species Phocea massiliensis 1 6 5 9 1 4 1
species Phocicoccus pinnipedialis 66
species Phoenicibacter congonensis 255 1 1 2
species Photobacterium angustum 1
species Photobacterium aphoticum 1
species Photobacterium aquimaris 2
species Photobacterium damselae 1 101 1 2 1
species Photobacterium gaetbulicola 26 2
species Photobacterium ganghwense 1
species Photobacterium jeanii 3
species Photobacterium kishitanii 4
species Photobacterium lutimaris 8
species Photobacterium phosphoreum 6
species Photobacterium profundum 17 1 1
species Photobacterium sanguinicancri 1
species Photobacterium sp. CCB-ST2H9 1
species Photobacterium sp. GJ3 1
species Photobacterium toruni 2
species Photorhabdus akhurstii 2
species Photorhabdus asymbiotica 1 109 9 2
species Photorhabdus laumondii 7 1 1
species Photorhabdus luminescens 1 1
species Photorhabdus thracensis 4 2
species Phototrophicus methaneseepsis 2
species Phreatobacter aquaticus 42
species Phreatobacter cathodiphilus 72 1 1
species Phreatobacter oligotrophus 1
species Phreatobacter stygius 26 2
species Phycicoccus duodecadis 1
species Phycicoccus endophyticus 2
species Phycicoccus jejuensis 3 1
species Phycicoccus sonneratiae 1
species Phycicoccus sp. HDW14 7 2
species Phycisphaera mikurensis 2 91 1 2
species Phycisphaerae bacterium RAS2 31
species Phycomyces blakesleeanus 1
species Phyllobacterium bourgognense 3
species Phyllobacterium catacumbae 6
species Phyllobacterium myrsinacearum 8
species Phyllobacterium sp. 628 1
species Phyllobacterium zundukense 10 1
species Phytoactinopolyspora endophytica 16
species Phytobacter diazotrophicus 7
species Phytobacter massiliensis 2
species Phytobacter sp. MRY16-398 11 1
species Phytobacter sp. SCO41 8
species Phytobacter ursingii 20
species Phytohabitans flavus 31 2
species Phytohabitans houttuyneae 1
species Phytohabitans rumicis 1
species Phytohabitans suffuscus 7 1 1
species Phytomonospora endophytica 51
species Pichia kudriavzevii 4 8 5
species Picornavirales sp. 1
species Picosynechococcus sp. PCC 7003 1
species Pigmentiphaga aceris 57 2
species Pigmentiphaga daeguensis 1
species Pigmentiphaga sp. H8 82 3 2
species Pijolavirus PspYZU08 2
species Pikeienuella piscinae 44
species Pilibacter termitis 72
species Pilimelia columellifera 72
species Pilimelia terevasa 3
species Pimelobacter simplex 1 13 2
species Pirellula sp. SH-Sr6A 2
species Pirellula staleyi 4 27 1 1
species Pirellulimonas nuda 69 2
species Piscibacillus salipiscarius 1
species Pisciglobus halotolerans 21
species Piscinibacter aquaticus 16
species Piscinibacter gummiphilus 42 1
species Piscinibacter sp. XHJ-5 1 2
species Piscirickettsia salmonis 14 11 1 1
species Pisolithus tinctorius 1
species Pistricoccus aurantiacus 12 1
species Pithovirus LCPAC101 1
species Planctomyces sp. SH-PL14 25 2
species Planctomyces sp. SH-PL62 124 1 2
species Planctomycetaceae bacterium 6
species Planctomycetes bacterium MalM25 92
species Planctomycetes bacterium Pan216 25
species Planctomycetes bacterium Pla163 25
species Planctomycetes bacterium Poly30 44
species Planctomycetes bacterium TBK1r 4
species Planctomycetota bacterium 99
species Planctopirus limnophila 2 6 1 1
species Planifilum composti 1
species Planifilum fimeticola 3033 44 1 6
species Planktomarina temperata 4
species Planktothricoides raciborskii 1
species Planktothrix agardhii 1 3 2
species Planktothrix mougeotii 16
species Planktothrix pseudagardhii 1
species Planococcus antarcticus 9 4 1
species Planococcus chinensis 43 4 1
species Planococcus columbae 956 197 1 1
species Planococcus dechangensis 2
species Planococcus donghaensis 3 1
species Planococcus faecalis 1 2
species Planococcus glaciei 1 50 1 2
species Planococcus halocryophilus 7 1
species Planococcus halotolerans 2
species Planococcus kocurii 1
species Planococcus lenghuensis 94 2 2
species Planococcus maritimus 67 1 2
species Planococcus massiliensis 36 1
species Planococcus plakortidis 18 1
species Planococcus rifietoensis 1 1
species Planococcus sp. 107-1 2
species Planococcus sp. MB-3u-03 39 3
species Planococcus sp. PAMC 21323 4 3 1
species Planococcus versutus 5 1 2
species Planomicrobium okeanokoites 1
species Planomicrobium psychrophilum 4
species Planomicrobium sp. Y50 46
species Planomicrobium stackebrandtii 81 1
species Planotetraspora thailandica 1
species Plantactinospora sp. BB1 1 1
species Plantactinospora sp. KBS50 9 2 2
species Plantibacter flavus 4
species Plantibacter sp. PA-3-X8 1 1
species Plasmid ColIa 1
species Plasmid F 1
species Plasmid pAM-beta-1 1
species Plasmid pIlo8 1
species Plasmid pLP1 1
species Plasmid pMM237 1
species Plasmid pSM1 1
species Plasmid R1-19 1
species Plasmid R65 1
species Plasmid SLP1 1
species Plasmodium berghei 1
species Plasmodium chabaudi 4
species Plasmodium coatneyi 1
species Plasmodium cynomolgi 1
species Plasmodium falciparum 1
species Plasmodium gaboni 1
species Plasmodium gallinaceum 1
species Plasmodium knowlesi 2
species Plasmodium malariae 4 1
species Plasmodium ovale 1
species Plasmodium reichenowi 4 1
species Plasmodium relictum 4 1
species Plasmodium sp. DRC-Itaito 2
species Plasmodium sp. gorilla clade G1 2
species Plasmodium sp. gorilla clade G2 1
species Plasmodium sp. gorilla clade G3 2
species Plasmodium vinckei 1
species Plasmodium vivax 1 1
species Plasmodium yoelii 4 2
species Plasticicumulans acidivorans 13
species Plasticicumulans lactativorans 172 2 2
species Plautia stali symbiont 18 1
species Pleionea mediterranea 2
species Plenodomus biglobosus 2
species Plenodomus lingam 1
species Pleomorphomonas koreensis 1 1
species Pleomorphomonas oryzae 5
species Pleomorphomonas sp. SM30 30 1
species Plesiocystis pacifica 5
species Plesiomonas shigelloides 13 34 2 2
species Pleurastrum terricola 1
species Pleurocapsa minor 1
species Pleurocapsa sp. PCC 7327 1 2
species Pluralibacter gergoviae 143 174 3 2
species Pluralibacter pyrinus 42
species Pochonia chlamydosporia 1 8
species Podospora comata 63
species Podoviridae sp. 7
species Podoviridae sp. ct7Ex2 1
species Podoviridae sp. ct7Kl21 1
species Podoviridae sp. ct9P15 1
species Podoviridae sp. ctC2p8 1
species Podoviridae sp. ctFbF42 1
species Podoviridae sp. ctHm32 1
species Podoviridae sp. ctnYE48 1
species Polaribacter batillariae 2
species Polaribacter butkevichii 41 3
species Polaribacter cellanae 1
species Polaribacter dokdonensis 3
species Polaribacter filamentus 1
species Polaribacter gangjinensis 1
species Polaribacter glomeratus 1
species Polaribacter haliotis 1 2
species Polaribacter huanghezhanensis 1
species Polaribacter litorisediminis 1
species Polaribacter pectinis 1
species Polaribacter reichenbachii 3 2
species Polaribacter sejongensis 3
species Polaribacter sp. AHE13PA 1
species Polaribacter sp. ALD11 2
species Polaribacter sp. BM10 3
species Polaribacter sp. Hel1_33_78 4
species Polaribacter sp. KT 15 1
species Polaribacter sp. KT25b 4
species Polaribacter sp. L3A8 2 1
species Polaribacter sp. MED152 12 1 2
species Polaribacter sp. NJDZ03 2
species Polaribacter sp. Q13 1
species Polaribacter sp. SA4-10 3
species Polaribacter sp. SA4-12 3
species Polaribacter undariae 1
species Polaribacter vadi 2 2
species Polaromonas hydrogenivorans 1
species Polaromonas jejuensis 2
species Polaromonas naphthalenivorans 2 2 34 2 1
species Polaromonas sp. JS666 30 1
species Polaromonas vacuolata 1 29
species Pollutimonas thiosulfatoxidans 11 1 1
species Polyangium aurulentum 2
species Polycladomyces abyssicola 82 2
species Polymorphobacter multimanifer 7
species Polymorphospora rubra 2
species Polymorphum gilvum 17 3
species Polynucleobacter acidiphobus 2
species Polynucleobacter asymbioticus 8 10 1 1
species Polynucleobacter cosmopolitanus 2
species Polynucleobacter difficilis 11 4
species Polynucleobacter duraquae 1
species Polynucleobacter necessarius 6 115 1 1
species Polynucleobacter paneuropaeus 1 2
species Polynucleobacter rarus 72 1
species Polynucleobacter sp. AP-Ainpum-60-G11 1
species Polynucleobacter sp. AP-Sving-400A-A2 1
species Polynucleobacter sp. es-EL-1 1
species Polynucleobacter sp. MWH-Spelu-300-X4 1
species Polynucleobacter sp. MWH-UH2A 1
species Polynucleobacter sp. UB-Siik-W21 1
species Polynucleobacter tropicus 1
species Polynucleobacter wuianus 1
species Polynucleobacter yangtzensis 1
species Polysiphonia sp. 1
species Polysiphonia teges 1
species Polystyrenella longa 2
species Pontibaca methylaminivorans 15
species Pontibacillus chungwhensis 1
species Pontibacillus halophilus 685 307 1 1
species Pontibacillus marinus 6 1
species Pontibacillus sp. ALD_SL1 2
species Pontibacillus sp. HMF3514 35 2
species Pontibacter actiniarum 1 143 2
species Pontibacter akesuensis 95 2 1
species Pontibacter kalidii 1 2
species Pontibacter korlensis 3 37 2
species Pontibacter niistensis 1806 1 1
species Pontibacter pudoricolor 46 2
species Pontibacter roseus 6
species Pontibacter ruber 1
species Pontibacter russatus 182 1 1 2
species Pontibacter sp. SGAir0037 102
species Pontibrevibacter nitratireducens 11
species Ponticaulis koreensis 4
species Pontimonas salivibrio 5 1
species Pontivivens insulae 1
species Pontivivens ytuae 1
species Poophage MBI-2016a 18
species Poophage sp. 8
species Porcincola intestinalis 1
species Porcine feces associated IAS virus like virus 6
species Porcine picobirnavirus 1
species Porcine type-C oncovirus 3
species Poriferisphaera corsica 3 2
species Porphyra umbilicalis 1
species Porphyrobacter sp. CACIAM 03H1 11 1
species Porphyrobacter sp. HT-58-2 3
species Porphyrobacter sp. LM 6 9 1 1
species Porphyrobacter sp. NMC22 1
species Porphyrobacter sp. YT40 15
species Porphyromonadaceae bacterium 1 1 2
species Porphyromonadaceae bacterium AIP925.11 1
species Porphyromonadaceae bacterium FC4 1
species Porphyromonadaceae bacterium S190 2
species Porphyromonadaceae bacterium UBA7173 1
species Porphyromonas asaccharolytica 1023 326 77 259 9 3 20 1 2
species Porphyromonas bennonis 1183 696 264 56 1 3 4
species Porphyromonas cangingivalis 1 258 245 1 1 2
species Porphyromonas canis 3320 3 6
species Porphyromonas canoris 55
species Porphyromonas catoniae 411 9 4
species Porphyromonas circumdentaria 152 169 1 2
species Porphyromonas crevioricanis 263 159 224 1 2
species Porphyromonas endodontalis 27 248 4 1 3 2
species Porphyromonas gingivalis 14 11 269 9 8 2 3 1
species Porphyromonas gulae 3
species Porphyromonas levii 3 237 1 2
species Porphyromonas macacae 74 91
species Porphyromonas pasteri 34
species Porphyromonas pogonae 44 2 2
species Porphyromonas somerae 1014 284 72 9 2 1 3 1 1 1 2
species Porphyromonas sp. 2024b 76
species Porphyromonas sp. 2026 28
species Porphyromonas sp. 31_2 1 22 4
species Porphyromonas sp. canine oral taxon 401 2
species Porphyromonas sp. oral taxon 275 1 2
species Porphyromonas sp. S8 86-12 29
species Porphyromonas uenonis 566 182 41 34 3 1 1
species Porphyropsis coccinea 1
species Portibacter lacus 5
species Porticoccus hydrocarbonoclasticus 1
species Poseidonibacter lekithochrous 1
species Poseidonibacter parvus 3
species Posidoniimonas corsicana 1
species Postia placenta 1 1
species Povalibacter uvarum 6
species Pradoshia sp. D12 70 2
species Pragia fontium 301 19 2
species Prauserella aidingensis 1
species Prauserella marina 16 1
species Prauserella rugosa 2 1
species Prescottella equi 4 42 1
species Prevotella amnii 323 57 7 7
species Prevotella aurantiaca 1408 10 1 6
species Prevotella bivia 1002 424 122 212 4 2 1 2
species Prevotella communis 1
species Prevotella corporis 2137 837 84 4 1 2 2 7 2 3
species Prevotella dentalis 13 264 20 9 2 2
species Prevotella dentasini 872 115 1 7
species Prevotella denticola 16 69 266 20 9 3
species Prevotella disiens 995 387 152 51 1 1 1 1 2 1
species Prevotella falsenii 19 144
species Prevotella fusca 6 265 20 10 1
species Prevotella herbatica 2 3
species Prevotella histicola 94 60 1 2
species Prevotella intermedia 17 10 3 273 20 30 3 1
species Prevotella jejuni 267 1 4 2
species Prevotella marseillensis 1 1
species Prevotella massiliensis 1
species Prevotella melaninogenica 68 24 270 21 9 3 1
species Prevotella merdae 1
species Prevotella micans 207 188 4
species Prevotella multiformis 237 41 6 2 2
species Prevotella nigrescens 42 71 13 3 8 1 2 1 3
species Prevotella pallens 10 30 3 1
species Prevotella pectinovora 1 1 1
species Prevotella phage phi AR29 18 1
species Prevotella scopos 260 9 7 2
species Prevotella sp. 3
species Prevotella sp. 885 1
species Prevotella sp. AM23-5 1 1 1
species Prevotella sp. AM34-19LB 4 1
species Prevotella sp. AM42-24 1 1
species Prevotella sp. BV3C7 20
species Prevotella sp. BV3P1 1
species Prevotella sp. CAG:1031 1
species Prevotella sp. CAG:386 1
species Prevotella sp. E13-17 1 2
species Prevotella sp. E13-3 2
species Prevotella sp. E15-14 1 2
species Prevotella sp. E15-22 2 2
species Prevotella sp. E2-25 2
species Prevotella sp. E2-28 2 2
species Prevotella sp. E9-3 2 2
species Prevotella sp. Marseille 9
species Prevotella sp. oral taxon 299 259 4 6 2
species Prevotella sp. oral taxon 472 1
species Prevotella sp. oral taxon 475 1 2
species Prevotella sp. P3-122 1
species Prevotella sp. P5-108 1
species Prevotella sp. P5-119 2
species Prevotella sp. P5-92 1
species Prevotella sp. Rep29 2 3
species Prevotella sp. RS2 8
species Prevotella sp. S4-10 36
species Prevotella sp. S8 F8 2
species Prevotella sp. Sc00026 50
species Prevotella sp. Sc00028 6
species Prevotella sp. Sc00033 6
species Prevotella sp. Sc00066 5
species Prevotella sp. Smarlab 121567 1
species Prevotella sp. TCVGH 1
species Prevotella sp. TF12-30 6 1
species Prevotella sp. WAL 2039G 1 1
species Prevotella veroralis 342 5 3 1 2
species Prevotellaceae bacterium 3
species Prevotellaceae bacterium UBA6382 1
species Prevotellamassilia timonensis 3 1
species Priestia aryabhattai 13 2
species Priestia endophytica 1
species Priestia filamentosa 139 1 1 1
species Priestia flexa 109 1 2
species Priestia koreensis 2
species Priestia megaterium 3 113 1 1 6 2
species Priestia paraflexa 6
species Priestia sp. J2 1
species primary endosymbiont of Sitophilus zeamais 3
species Prochlorococcus marinus 6 2 113 1 4 2
species Prochlorococcus sp. MIT 0801 1
species Prochlorothrix hollandica 7
species Prodigiosinella confusarubida 22 1 2
species Profundibacter amoris 10 1 2
species Promicromonospora kroppenstedtii 3 1
species Promicromonospora umidemergens 1
species Propionibacteriaceae bacterium 1
species Propionibacterium acidifaciens 22 4 126 2
species Propionibacterium australiense 1 71 2 2
species Propionibacterium freudenreichii 19 12 192 5 3 3 1 2
species Propionibacterium phage DrParker 1
species Propionibacterium phage Moyashi 1
species Propionibacterium phage pa28 1
species Propionibacterium phage pa63 1
species Propionibacterium phage PacnesP1 1
species Propionibacterium phage Supernova 1
species Propionibacterium sp. DORA_15 1
species Propionibacterium sp. KPL1844 11
species Propionibacterium sp. KPL2005 28
species Propionibacterium sp. MSP09A 6
species Propionibacterium sp. S342 8
species Propionibacterium sp. V07/12348 2
species Propioniciclava coleopterorum 85 1
species Propioniciclava sp. MC1595 1
species Propionicimonas paludicola 3 1
species Propioniferax innocua 219 3 1
species Propionigenium maris 12
species Propionigenium modestum 181 1
species Propionimicrobium lymphophilum 1 9
species Propionispira arboris 1
species Propionispira arcuata 34
species Propionispira paucivorans 1
species Propionispora hippei 3228 9 7
species Propionispora sp. 2/2-37 1
species Propionispora vibrioides 8
species Propionivibrio dicarboxylicus 256 5 1
species Propionivibrio limicola 26 23
species Propionivibrio pelophilus 4 25
species Prosthecobacter debontii 5 15
species Prosthecobacter dejongeii 3
species Prosthecobacter fluviatilis 316 17
species Prosthecobacter fusiformis 1
species Prosthecobacter vanneervenii 2 1
species Prosthecochloris aestuarii 9 3 2
species Prosthecochloris sp. CIB 2401 20 3 2
species Prosthecochloris sp. GSB1 134 1 2
species Prosthecochloris sp. HL-130-GSB 22 1 2
species Prosthecomicrobium pneumaticum 20
species Protaetiibacter intestinalis 10 1
species Protaetiibacter larvae 7
species Proteiniborus ethanoligenes 452 3 9
species Proteiniclasticum ruminis 3 4
species Proteiniclasticum sp. QWL-01 1 3
species Proteiniphilum acetatigenes 41
species Proteiniphilum propionicum 3
species Proteiniphilum saccharofermentans 245 1 3 3
species Proteinivorax tanatarense 146 2 5
species Proteobacteria bacterium CAG:139 1
species Proteobacteria bacterium CAG:495 1
species Proteocatella sphenisci 357 2 4
species Proteomonas sp. CCMP326 1
species Proteromonas lacertae 1
species Proteus columbae 2
species Proteus hauseri 36 1 4 1
species Proteus mirabilis 27 115 10 109 9 8 1 15 9 2 7 2
species Proteus myxofaciens 69
species Proteus penneri 123 45 4 8 7 2
species Proteus sp. 3163O2 1
species Proteus sp. DL4.8 1
species Proteus sp. ZN5 1
species Proteus terrae 1 1 1
species Proteus vulgaris 3 18 59 9 12 14 9 7 1
species Provencibacterium massiliense 4 2
species Providencia alcalifaciens 22 216 6 8 14 2
species Providencia burhodogranariea 26
species Providencia heimbachae 2 1 17 2
species Providencia huaxiensis 1 1
species Providencia rettgeri 3 20 37 9 11 2
species Providencia rustigianii 2 4 8 9 1
species Providencia sneebia 12 1
species Providencia sp. R33 1
species Providencia stuartii 5 29 19 4 4
species Providencia vermicola 1 4
species Przondovirus 2044307w 1
species Przondovirus BIS33 1
species Przondovirus henu1 1
species Przondovirus IL33 1
species Przondovirus IME205 1
species Przondovirus IME321 1
species Przondovirus K11 1
species Przondovirus K30 1
species Przondovirus K5 1
species Przondovirus K52 1
species Przondovirus K54 1
species Przondovirus KN11 1
species Przondovirus KN31 1
species Przondovirus KN41 1
species Przondovirus Kp1 1
species Przondovirus KP32 1
species Przondovirus kpssk3 1
species Przondovirus KpV289 1
species Przondovirus KpV763 1
species Przondovirus KpV767 1
species Przondovirus pharr 1
species Przondovirus PRA33 1
species Przondovirus SHKp152410 1
species Pseudacidovorax intermedius 4
species Pseudactinotalea sp. HY158 26 2
species Pseudaeromonas sharmana 64
species Pseudalgibacter alginicilyticus 1 2
species Pseudalkalibacillus berkeleyi 9
species Pseudalkalibacillus decolorationis 4
species Pseudalkalibacillus hwajinpoensis 1 2
species Pseudaminobacter defluvii 1 3
species Pseudaminobacter salicylatoxidans 1
species Pseudanabaena galeata 2
species Pseudanabaena sp. ABRG5-3 2 3 2
species Pseudanabaena sp. PCC 7367 2
species Pseudarcicella hirudinis 60 2
species Pseudarcicella sp. HME7025 1
species Pseudarthrobacter chlorophenolicus 22
species Pseudarthrobacter equi 25
species Pseudarthrobacter phenanthrenivorans 52 1
species Pseudarthrobacter psychrotolerans 33 1
species Pseudarthrobacter sp. NIBRBAC000502770 2
species Pseudarthrobacter sp. NIBRBAC000502771 2
species Pseudarthrobacter sp. NIBRBAC000502772 6
species Pseudarthrobacter sulfonivorans 5
species Pseudazoarcus pumilus 51 2
species Pseudemcibacter aquimaris 1
species Pseudescherichia vulneris 26 61 1
species Pseudidiomarina donghaiensis 96
species Pseudidiomarina indica 6
species Pseudidiomarina planktonica 4
species Pseudidiomarina salinarum 1
species Pseudoalteromonas agarivorans 1
species Pseudoalteromonas aliena 2 1
species Pseudoalteromonas arctica 3 1
species Pseudoalteromonas atlantica 1
species Pseudoalteromonas byunsanensis 1
species Pseudoalteromonas carrageenovora 1
species Pseudoalteromonas denitrificans 1
species Pseudoalteromonas espejiana 1
species Pseudoalteromonas gracilis 2
species Pseudoalteromonas haloplanktis 1
species Pseudoalteromonas luteoviolacea 1 2
species Pseudoalteromonas ostreae 1
species Pseudoalteromonas phenolica 1 2 1
species Pseudoalteromonas piscicida 3 2
species Pseudoalteromonas rubra 4 1
species Pseudoalteromonas ruthenica 1
species Pseudoalteromonas sp. 1_2015MBL_MicDiv 1
species Pseudoalteromonas sp. Bsw20308 1
species Pseudoalteromonas sp. DL-6 1
species Pseudoalteromonas sp. NC201 1
species Pseudoalteromonas sp. R3 1
species Pseudoalteromonas sp. SCSIO 43095 1
species Pseudoalteromonas spongiae 3
species Pseudoalteromonas tetraodonis 1
species Pseudoalteromonas translucida 1
species Pseudoalteromonas tunicata 1
species Pseudoalteromonas viridis 1
species Pseudoalteromonas xiamenensis 1
species Pseudobacter ginsenosidimutans 127 2
species Pseudobacteroides cellulosolvens 2 1 1
species Pseudobdellovibrio exovorus 27 3 1 1 1
species Pseudobutyrivibrio ruminis 4 24 3 1 1 1 1
species Pseudobutyrivibrio sp. 3C20C 1
species Pseudobutyrivibrio sp. 4C55C 1
species Pseudobutyrivibrio sp. ACV-2 1
species Pseudobutyrivibrio sp. AR14 1
species Pseudobutyrivibrio sp. CG33 1 8
species Pseudobutyrivibrio sp. INlla6 1 16
species Pseudobutyrivibrio sp. MD2005 1
species Pseudobutyrivibrio sp. OR37 1
species Pseudobutyrivibrio xylanivorans 4507 20 268 5 2 3 1
species Pseudochrobactrum saccharolyticum 3
species Pseudochrobactrum sp. Wa41.01b-1 1
species Pseudochrobactrum sp. XF203 2
species Pseudocitrobacter corydidari 2
species Pseudoclavibacter alba 21 1
species Pseudoclavibacter caeni 15 1
species Pseudoclavibacter helvolus 1 1
species Pseudoclavibacter soli 576 2
species Pseudoclavibacter sp. Marseille-Q3772 2
species Pseudoclavibacter sp. Timone 26
species Pseudocnuella soli 82 2 2
species Pseudodesulfovibrio aespoeensis 2 175 3 1 1
species Pseudodesulfovibrio cashew 215 1 2
species Pseudodesulfovibrio indicus 206 1 2
species Pseudodesulfovibrio mercurii 50 2 1
species Pseudodesulfovibrio piezophilus 27 1
species Pseudodesulfovibrio portus 1 2
species Pseudodesulfovibrio profundus 115 106 2
species Pseudodesulfovibrio sediminis 1
species Pseudodesulfovibrio sp. zrk46 88 1
species Pseudodesulfovibrio thermohalotolerans 2
species Pseudodesulfovibrio tunisiensis 175 1 1 2
species Pseudoduganella albidiflava 21 2
species Pseudoduganella armeniaca 10
species Pseudoduganella chitinolytica 1
species Pseudoduganella flava 1 20 1
species Pseudoduganella lutea 24
species Pseudoduganella plicata 37 2 1
species Pseudoduganella umbonata 13 1 2
species Pseudoduganella violaceinigra 18
species Pseudoflavonifractor capillosus 1320 467 7 5 11 25 9 5 7 3 1 1
species Pseudoflavonifractor phocaeensis 5 4 1 1
species Pseudoflavonifractor sp. AF19-9AC 4 1
species Pseudoflavonifractor sp. An176 1
species Pseudoflavonifractor sp. An187 1
species Pseudoflavonifractor sp. An44 1
species Pseudoflavonifractor sp. BSD2780061688st1 E11 2
species Pseudoflavonifractor sp. Marseille-P3106 3
species Pseudoflavonifractor sp. MSJ-30 1
species Pseudoflavonifractor sp. MSJ-37 1
species Pseudoflavonifractor sp. SW1122 1
species Pseudofrankia inefficax 25 1 2
species Pseudofulvibacter geojedonensis 3
species Pseudoglutamicibacter albus 8 1
species Pseudoglutamicibacter cumminsii 2 2 2
species Pseudogulbenkiania sp. NH8B 36 1 1
species Pseudogymnoascus destructans 1
species Pseudogymnoascus verrucosus 1
species Pseudohalocynthiibacter aestuariivivens 5
species Pseudohongiella spirulinae 1 5 2 1
species Pseudokineococcus lusitanus 57
species Pseudokineococcus marinus 9
species Pseudolabrys sp. FHR47 20 1
species Pseudolabrys taiwanensis 1 39
species Pseudoleptotrichia goodfellowii 5 43 76 1 2
species Pseudolysobacter antarcticus 17 1 1
species Pseudomaricurvus alcaniphilus 1
species Pseudomaricurvus alkylphenolicus 5
species Pseudomonadaceae bacterium SI-3 1
species Pseudomonadota bacterium 136 4
species Pseudomonas abietaniphila 4
species Pseudomonas abieticivorans 1
species Pseudomonas aeruginosa 240 7 12 258 21 3 1 1 3 1 2 1
species Pseudomonas agarici 1 1 8
species Pseudomonas alcaligenes 12 26 11 1
species Pseudomonas alcaliphila 15 7
species Pseudomonas alkylphenolica 15
species Pseudomonas amygdali 3 17 3 3 1
species Pseudomonas anguilliseptica 1
species Pseudomonas antarctica 12
species Pseudomonas arsenicoxydans 11
species Pseudomonas asplenii 5 1
species Pseudomonas asturiensis 16
species Pseudomonas avellanae 1
species Pseudomonas azotoformans 31 36 1
species Pseudomonas benzenivorans 12
species Pseudomonas berkeleyensis 9
species Pseudomonas bijieensis 1
species Pseudomonas brassicacearum 10
species Pseudomonas brenneri 44 8
species Pseudomonas campi 12 1
species Pseudomonas caricapapayae 2
species Pseudomonas cavernae 11
species Pseudomonas cedrina 5
species Pseudomonas cerasi 3 1
species Pseudomonas chlororaphis 1 160 4 2
species Pseudomonas cichorii 25 8 1
species Pseudomonas cinnamophila 4
species Pseudomonas citronellolis 1 78 1
species Pseudomonas clemancea 17 4
species Pseudomonas collierea 22
species Pseudomonas coronafaciens 14 10
species Pseudomonas corrugata 2 6
species Pseudomonas cremoricolorata 1 6
species Pseudomonas deceptionensis 4
species Pseudomonas denitrificans (nom. rej.) 8
species Pseudomonas entomophila 10 14 1
species Pseudomonas eucalypticola 9
species Pseudomonas extremaustralis 6
species Pseudomonas extremorientalis 6
species Pseudomonas flexibilis 1
species Pseudomonas fluorescens 10 6 1 258 1 5 1 1
species Pseudomonas fragi 163 37 1 1
species Pseudomonas frederiksbergensis 5 34
species Pseudomonas fulva 14
species Pseudomonas furukawaii 16
species Pseudomonas fuscovaginae 4
species Pseudomonas gessardii 3
species Pseudomonas gingeri 4
species Pseudomonas glycinae 4
species Pseudomonas graminis 1 11
species Pseudomonas granadensis 5
species Pseudomonas guangdongensis 15 2
species Pseudomonas guguanensis 6
species Pseudomonas guineae 10 3
species Pseudomonas insulae 1
species Pseudomonas japonica 26 15
species Pseudomonas jinjuensis 1
species Pseudomonas khazarica 1
species Pseudomonas knackmussii 13 1 1
species Pseudomonas koreensis 72 32 2
species Pseudomonas kribbensis 6 2
species Pseudomonas lalkuanensis 9 1 1
species Pseudomonas libanensis 8 1
species Pseudomonas lini 3 1 6
species Pseudomonas lundensis 139 25 1 2
species Pseudomonas lurida 3 3
species Pseudomonas lutea 13
species Pseudomonas luteola 4 5 1 1
species Pseudomonas mandelii 24 4
species Pseudomonas marginalis 2 6
species Pseudomonas marincola 24 1
species Pseudomonas mediterranea 12
species Pseudomonas mendocina 12 5 161 4
species Pseudomonas metavorans 4
species Pseudomonas migulae 8
species Pseudomonas monsensis 1
species Pseudomonas monteilii 9 1 29 1
species Pseudomonas moraviensis 7 1
species Pseudomonas mosselii 4
species Pseudomonas mucidolens 8
species Pseudomonas multiresinivorans 10 1
species Pseudomonas nitroreducens 7 1 8 1
species Pseudomonas nunensis 1
species Pseudomonas ogarae 1
species Pseudomonas oleovorans 9 9 4 3
species Pseudomonas orientalis 1 32
species Pseudomonas oryzae 8 6 3
species Pseudomonas oryzihabitans 21 5 85 1
species Pseudomonas otitidis 11 24 1
species Pseudomonas palleroniana 6
species Pseudomonas panacis 4 23
species Pseudomonas panipatensis 10 1
species Pseudomonas parafulva 59 9
species Pseudomonas plecoglossicida 1 7
species Pseudomonas poae 3 38
species Pseudomonas pohangensis 8 2
species Pseudomonas prosekii 6
species Pseudomonas protegens 39 1
species Pseudomonas proteolytica 13
species Pseudomonas psychrophila 11 30 3
species Pseudomonas psychrotolerans 2 32 2
species Pseudomonas putida 24 1 254 9 24 1 3 1
species Pseudomonas reidholzensis 1
species Pseudomonas reinekei 8
species Pseudomonas resinovorans 10 25 1 1
species Pseudomonas rhizophila 3
species Pseudomonas rhizosphaerae 6 1
species Pseudomonas rhodesiae 19 9 1 1 1
species Pseudomonas saponiphila 17
species Pseudomonas saudimassiliensis 9
species Pseudomonas saudiphocaensis 2
species Pseudomonas savastanoi 2 1
species Pseudomonas seleniipraecipitans 4
species Pseudomonas sessilinigenes 3 1
species Pseudomonas sihuiensis 8
species Pseudomonas silesiensis 7
species Pseudomonas silvicola 1
species Pseudomonas simiae 10
species Pseudomonas soli 3
species Pseudomonas sp. 4
species Pseudomonas sp. 02C 26 12 1
species Pseudomonas sp. 09C 129 3 1
species Pseudomonas sp. 108Z1 4
species Pseudomonas sp. 2AGIII 1
species Pseudomonas sp. 31-12 4 1
species Pseudomonas sp. 43A 5
species Pseudomonas sp. 7SR1 8 1
species Pseudomonas sp. a101-18-2 23
species Pseudomonas sp. a111-5 1
species Pseudomonas sp. A214 3
species Pseudomonas sp. ABC1 7 1
species Pseudomonas sp. ACM7 4 1
species Pseudomonas sp. ADAK13 5
species Pseudomonas sp. ADAK18 5
species Pseudomonas sp. ADAK22 3
species Pseudomonas sp. AK6U 1
species Pseudomonas sp. ATCC 13867 12 1
species Pseudomonas sp. ATCC 43928 3
species Pseudomonas sp. B10 5
species Pseudomonas sp. B14-6 3
species Pseudomonas sp. B21-053 1
species Pseudomonas sp. BBP2017 1
species Pseudomonas sp. BIOMIG1BAC 4
species Pseudomonas sp. BJP69 3
species Pseudomonas sp. bs2935 1
species Pseudomonas sp. C27(2019) 6 1
species Pseudomonas sp. CC6-YY-74 23 1
species Pseudomonas sp. CCOS 191 4
species Pseudomonas sp. CFSAN084952 3
species Pseudomonas sp. CMR5c 6 1 1
species Pseudomonas sp. DG56-2 8
species Pseudomonas sp. DQ-01 2
species Pseudomonas sp. DR 5-09 3
species Pseudomonas sp. DS1 3
species Pseudomonas sp. DTU12.1 2
species Pseudomonas sp. DTU12.3 5 1
species Pseudomonas sp. DY-1 13 1
species Pseudomonas sp. FGI182 1
species Pseudomonas sp. G1116 4
species Pseudomonas sp. gcc21 4
species Pseudomonas sp. GLE121 1
species Pseudomonas sp. GmFRB023 3
species Pseudomonas sp. GR 6-02 3
species Pseudomonas sp. HLS-6 8 1
species Pseudomonas sp. IB20 6
species Pseudomonas sp. J380 7
species Pseudomonas sp. JY-Q 2
species Pseudomonas sp. K-62 8
species Pseudomonas sp. KB23 1 2
species Pseudomonas sp. KNUC1026 1
species Pseudomonas sp. KU43P 8
species Pseudomonas sp. KUIN-1 1
species Pseudomonas sp. KVS86 3
species Pseudomonas sp. LAB-08 2
species Pseudomonas sp. LBUM920 3
species Pseudomonas sp. Leaf58 7
species Pseudomonas sp. LG1D9 5
species Pseudomonas sp. LG1E9 12
species Pseudomonas sp. LH1G9 1 1
species Pseudomonas sp. LPB0260 6
species Pseudomonas sp. LPH1 7 1
species Pseudomonas sp. LS44 1
species Pseudomonas sp. LTJR-52 4 1
species Pseudomonas sp. Lz4W 5
species Pseudomonas sp. M30-35 6
species Pseudomonas sp. MCI3434 1
species Pseudomonas sp. MFY143 1
species Pseudomonas sp. MM211 1
species Pseudomonas sp. MM213 1
species Pseudomonas sp. MPC6 7
species Pseudomonas sp. MRSN 12121 3 1
species Pseudomonas sp. MT-1 4 1
species Pseudomonas sp. MTM4 1
species Pseudomonas sp. MYb193 6
species Pseudomonas sp. NC02 3
species Pseudomonas sp. NIBRBAC000502773 5
species Pseudomonas sp. NS1(2017) 7 1
species Pseudomonas sp. OIL-1 6
species Pseudomonas sp. Os17 3
species Pseudomonas sp. Ost2 1
species Pseudomonas sp. p1(2021b) 1
species Pseudomonas sp. PcFRB119 1
species Pseudomonas sp. PDNC002 1
species Pseudomonas sp. PH1b 1
species Pseudomonas sp. phDV1 7
species Pseudomonas sp. PONIH3 3 1
species Pseudomonas sp. ps4-2 1
species Pseudomonas sp. R11-23-07 3
species Pseudomonas sp. R1-43-08 3
species Pseudomonas sp. R2-37-08W 3
species Pseudomonas sp. R2-60-08W 3
species Pseudomonas sp. R2-7-07 3
species Pseudomonas sp. R3-18-08 3
species Pseudomonas sp. R32 6
species Pseudomonas sp. R3-52-08 3
species Pseudomonas sp. R4-34-07 5 1
species Pseudomonas sp. R4-35-07 3
species Pseudomonas sp. R4-39-08 3 1
species Pseudomonas sp. R5-89-07 6 1
species Pseudomonas sp. R76 5
species Pseudomonas sp. R84 5
species Pseudomonas sp. RU47 3 3
species Pseudomonas sp. S09G 359 7
species Pseudomonas sp. S150 5
species Pseudomonas sp. S34 6
species Pseudomonas sp. S35 7
species Pseudomonas sp. S49 3
species Pseudomonas sp. SCB32 13
species Pseudomonas sp. Seg1 1
species Pseudomonas sp. SGAir0191 3
species Pseudomonas sp. SK 7
species Pseudomonas sp. St29 3
species Pseudomonas sp. St316 1
species Pseudomonas sp. StFLB209 10 1
species Pseudomonas sp. SW2.2A 1
species Pseudomonas sp. SWI36 3 1
species Pseudomonas sp. SWI44 1
species Pseudomonas sp. SXM-1 3
species Pseudomonas sp. TCU-HL1 18 1
species Pseudomonas sp. TKP 3
species Pseudomonas sp. TMW 2.1634 9 2
species Pseudomonas sp. URMO17WK12:I11 6 1
species Pseudomonas sp. UW4 5
species Pseudomonas sp. VLB120 1
species Pseudomonas sp. WCS374 1 1
species Pseudomonas sp. XWY-1 2
species Pseudomonas sp. Y39-6 1
species Pseudomonas sp. Z003-0.4C(8344-21) 3
species Pseudomonas straminea 13
species Pseudomonas syncyanea 14
species Pseudomonas synxantha 19 2 1
species Pseudomonas syringae 18 3 94 3 2
species Pseudomonas syringae group genomosp. 3 10 1
species Pseudomonas taetrolens 15
species Pseudomonas teessidea 45
species Pseudomonas thermotolerans 7 6
species Pseudomonas thivervalensis 1 5
species Pseudomonas tohonis 18 1
species Pseudomonas tolaasii 1 63 131 1
species Pseudomonas tremae 35
species Pseudomonas trivialis 16
species Pseudomonas tropicalis 113 1
species Pseudomonas tructae 7
species Pseudomonas umsongensis 4 11
species Pseudomonas uvaldensis 1
species Pseudomonas vancouverensis 5 10
species Pseudomonas veronii 33 5
species Pseudomonas versuta 16
species Pseudomonas viciae 4 1
species Pseudomonas viridiflava 93 11 1
species Pseudomonas yamanorum 11
species Pseudo-nitzschia simulans 1
species Pseudonocardia antarctica 6
species Pseudonocardia aurantiaca 1
species Pseudonocardia autotrophica 17 2
species Pseudonocardia babensis 1
species Pseudonocardia broussonetiae 29 2
species Pseudonocardia cytotoxica 1
species Pseudonocardia dioxanivorans 12 1
species Pseudonocardia hydrocarbonoxydans 4
species Pseudonocardia nitrificans 10
species Pseudonocardia petroleophila 19 1
species Pseudonocardia sp. AL041005-10 10 5
species Pseudonocardia sp. DSM 110487 2
species Pseudonocardia sp. HH130629-09 9 1 1
species Pseudonocardia sp. HH130630-07 7 1
species Pseudonocardia sulfidoxydans 5
species Pseudooceanicola marinus 1
species Pseudooceanicola nitratireducens 5
species Pseudooceanicola spongiae 1 1
species Pseudopedobacter beijingensis 57
species Pseudopedobacter saltans 221 97 2 2 2 2
species Pseudophaeobacter arcticus 10
species Pseudoprevotella muciniphila 257 1 3
species Pseudoramibacter alactolyticus 1925 246 2 2 4
species Pseudorhizobium banfieldiae 1
species Pseudorhodobacter antarcticus 2
species Pseudorhodobacter ferrugineus 118 1
species Pseudorhodobacter turbinis 5 1
species Pseudorhodoferax soli 1
species Pseudorhodoplanes sinuspersici 32 2
species Pseudoroseomonas aerophila 1
species Pseudoroseomonas cervicalis 1
species Pseudoruminococcus massiliensis 1 8 8 1
species Pseudoscillatoria coralii 517
species Pseudostreptobacillus hongkongensis 1
species Pseudosulfitobacter pseudonitzschiae 34 1
species Pseudosulfitobacter sp. DSM 107133 1
species Pseudothauera hydrothermalis 1 1
species Pseudothermotoga hypogea 1 2
species Pseudothermotoga lettingae 1
species Pseudothermotoga thermarum 1 3 2
species Pseudovibrio sp. FO-BEG1 61 1
species Pseudovirgaria hyperparasitica 1
species Pseudoxanthobacter liyangensis 5
species Pseudoxanthomonas daejeonensis 2
species Pseudoxanthomonas indica 3
species Pseudoxanthomonas japonensis 5
species Pseudoxanthomonas mexicana 16
species Pseudoxanthomonas sacheonensis 2
species Pseudoxanthomonas sangjuensis 50
species Pseudoxanthomonas sp. 9
species Pseudoxanthomonas sp. LC236 1
species Pseudoxanthomonas sp. SE1 1
species Pseudoxanthomonas spadix 1 9 3 1
species Pseudoxanthomonas suwonensis 38 1 1
species Pseudoxanthomonas taiwanensis 1
species Pseudozobellia thermophila 1
species Pseudozyma flocculosa 2 1
species Pseudozyma hubeiensis 1 1
species Psychrilyobacter atlanticus 32
species Psychrobacillus glaciei 31 2
species Psychrobacillus insolitus 2
species Psychrobacillus psychrotolerans 3
species Psychrobacillus sp. AK 1817 2
species Psychrobacillus sp. INOP01 2
species Psychrobacter adeliensis 11
species Psychrobacter aestuarii 1
species Psychrobacter alimentarius 4 4
species Psychrobacter arcticus 1 1
species Psychrobacter arenosus 3 2
species Psychrobacter celer 1
species Psychrobacter cibarius 3
species Psychrobacter faecalis 3
species Psychrobacter fozii 3
species Psychrobacter frigidicola 7
species Psychrobacter glacialis 1094 1
species Psychrobacter halophilus 1
species Psychrobacter lutiphocae 1
species Psychrobacter namhaensis 1
species Psychrobacter phenylpyruvicus 338 6 1
species Psychrobacter proteolyticus 3
species Psychrobacter pulmonis 2
species Psychrobacter sp. AntiMn-1 1
species Psychrobacter sp. DAB_AL43B 1
species Psychrobacter sp. ES-12 1
species Psychrobacter sp. P11F6 1
species Psychrobacter sp. P11G5 1
species Psychrobacter sp. WY6 1
species Psychrobacter sp. YP14 1
species Psychrobacter urativorans 1 33 1 1
species Psychrobacter vallis 2
species Psychroflexus gondwanensis 591 2
species Psychroflexus salarius 6
species Psychroflexus sp. ALD_RP9 2
species Psychroflexus torquis 32 2 3 1
species Psychroglaciecola arctica 1
species Psychromicrobium lacuslunae 23 1
species Psychromonas agarivorans 2
species Psychromonas antarctica 1
species Psychromonas aquimarina 2
species Psychromonas arctica 1 1
species Psychromonas hadalis 1
species Psychromonas ingrahamii 1 4 2
species Psychromonas japonica 24
species Psychromonas marina 1
species Psychromonas ossibalaenae 4
species Psychromonas sp. CNPT3 1 1
species Psychroserpens burtonensis 36 3
species Psychrosinus fermentans 25
species Psychrosphaera aestuarii 1
species Psychrosphaera saromensis 1
species Pterothamnion plumula 1
species Puccinia cf. psidii AE-2014 1
species Pukyongia salina 1 3
species Pukyongiella litopenaei 11 2
species Pullulanibacillus naganoensis 15
species Pullulanibacillus pueri 168
species Pullulanibacillus uraniitolerans 3
species Pulveribacter suum 10
species Pulvinaster venetus 1
species Punavirus RCS47 1
species Punctularia strigosozonata 3 1
species Puniceicoccaceae bacterium Marseille-Q1082 1
species Puniceicoccus vermicola 451 190
species Purpureocillium lilacinum 2
species Pusillibacter faecalis 2 4 3 1
species Pusillimonas noertemannii 1
species Pusillimonas sp. DMV24BSW_D 1 1
species Pusillimonas sp. T7-7 28 1 1
species Pustulibacterium marinum 1
species Pycnococcus provasolii 1
species Pyramidobacter piscolens 78 47 8 5 3
species Pyrenophora tritici-repentis 1
species Pyricularia grisea 8
species Pyricularia oryzae 8
species Pyricularia pennisetigena 8
species Pyrinomonas methylaliphatogenes 42
species Pyrococcus horikoshii 1
species Pyruvatibacter mobilis 46 1
species Pyxidicoccus fallax 4
species Qiania dongpingensis 2 3
species Qingshengfaniella alkalisoli 4 1
species Qipengyuania aquimaris 286 1
species Qipengyuania flava 1 17 1 1
species Qipengyuania sediminis 11
species Qipengyuania seohaensis 1 4 1 2
species Quadrisphaera granulorum 1
species Quatrionicoccus australiensis 2
species Qubevirus faecium 30
species Radiobacillus deserti 64 2
species Radiobacillus kanasensis 2
species Rahnella aceris 1
species Rahnella aquatilis 46 1 1
species Rahnella sikkimica 18 1 1
species Rahnella sp. 42-Carrot 1
species Rahnella sp. FB303 9
species Rahnella sp. WMR121 2
species Rahnella sp. WMR66 2
species Rahnella victoriana 1
species Raineyella fluvialis 54 2
species Ralstonia detusculanense 96
species Ralstonia insidiosa 140 49 2 1
species Ralstonia mannitolilytica 3 14
species Ralstonia pickettii 118 47 2 183 1 2
species Ralstonia pseudosolanacearum 1
species Ralstonia solanacearum 6 1 256 1 4 2
species Ralstonia sp. 5_2_56FAA 4
species Ralstonia sp. A52 6
species Ralstonia sp. S2.MAC.005 1 4
species Ralstonia syzygii 2 1
species Ramlibacter solisilvae 5
species Ramlibacter tataouinensis 10 204 1 2
species Ramlibacter terrae 15
species Ramularia collo-cygni 1
species Raoultella ornithinolytica 15 57 1 1
species Raoultella planticola 50 4 6 1 1 1
species Raoultella sp. X13 3
species Raoultella sp. YJ 1
species Raoultella terrigena 32 1
species Raoultibacter massiliensis 1 9
species Raoultibacter sp. 4
species Raoultibacter timonensis 1 2 1 3
species Raphidiopsis curvata 1 3
species Rapidithrix thailandica 9
species Rarobacter faecitabidus 8
species Rarobacter incanus 57
species Rasamsonia emersonii 1
species Rasiella rasia 2 1
species Rathayibacter festucae 8 1 1
species Rathayibacter iranicus 22 1
species Rathayibacter rathayi 3
species Rathayibacter sp. VKM Ac-2759 7 1
species Rathayibacter sp. VKM Ac-2760 2
species Rathayibacter sp. VKM Ac-2801 1
species Rathayibacter sp. VKM Ac-2805 1
species Rathayibacter tanaceti 5
species Rathayibacter toxicus 1 7 1
species Rathayibacter tritici 8 1
species Ravinvirus N15 3
species Reclinomonas americana 1
species Rehaibacterium terrae 2
species Reichenbachiella agariperforans 3
species Reichenbachiella faecimaris 25
species Reinekea aestuarii 24
species Reinekea forsetii 1 2
species Reinekea marinisedimentorum 3 214
species Renibacterium salmoninarum 1 6 1
species Reyranella massiliensis 4 1
species Reyranella soli 1
species Rhabdochromatium marinum 22 1
species Rhabdothermus arcticus 5
species Rheinheimera baltica 4
species Rheinheimera chironomi 43
species Rheinheimera mangrovi 5 1
species Rheinheimera mesophila 1
species Rheinheimera soli 13 10
species Rheinheimera sp. 09BSZB-9 1
species Rheinheimera sp. D18 7 1 1
species Rheinheimera sp. F8 2
species Rheinheimera tangshanensis 3
species Rheinheimera texasensis 10
species Rhizobiales bacterium NRL2 30
species Rhizobium alamii 5
species Rhizobium cellulosilyticum 3
species Rhizobium daejeonense 16
species Rhizobium etli 1 1 49 1
species Rhizobium favelukesii 15 1
species Rhizobium gallicum 11 38 2 1
species Rhizobium giardinii 1
species Rhizobium grahamii 8
species Rhizobium indigoferae 1
species Rhizobium jaguaris 23
species Rhizobium leguminosarum 250 1 5 2
species Rhizobium lusitanum 6
species Rhizobium mesoamericanum 2
species Rhizobium mesosinicum 1
species Rhizobium phaseoli 27
species Rhizobium pisi 10
species Rhizobium qilianshanense 3
species Rhizobium rhizogenes 10 1
species Rhizobium rhizoryzae 28 1
species Rhizobium rosettiformans 1
species Rhizobium sp. 11515TR 17 3
species Rhizobium sp. AB2/73 1
species Rhizobium sp. AC44/96 1
species Rhizobium sp. ACO-34A 17 1 1
species Rhizobium sp. ARZ01 1
species Rhizobium sp. B230/85 1
species Rhizobium sp. BG4 1
species Rhizobium sp. CC-CFT758 1
species Rhizobium sp. CIAT894 1 1 2
species Rhizobium sp. IRBG74 1
species Rhizobium sp. JSC-P2-622-8 1
species Rhizobium sp. Leaf262 1
species Rhizobium sp. N324 1
species Rhizobium sp. NXC14 1 1
species Rhizobium sp. NXC24 9
species Rhizobium sp. NZLR1 1
species Rhizobium sp. Q54 5
species Rhizobium sp. sc-w 1
species Rhizobium sp. SL42 1
species Rhizobium sp. T136 2
species Rhizobium sp. T45 2
species Rhizobium sp. WL3 10
species Rhizobium sp. WYJ-E13 1
species Rhizobium sp. Y9 2 1
species Rhizobium subbaraonis 3
species Rhizobium tibeticum 2
species Rhizobium tropici 11 1
species Rhizochromulina marina 1
species Rhizomicrobium electricum 12
species Rhizomicrobium palustre 1
species Rhizophagus irregularis 1 2
species Rhizopus arrhizus 1
species Rhizorhabdus dicambivorans 11 1
species Rhizorhabdus histidinilytica 1
species Rhizorhabdus phycosphaerae 1
species Rhizorhabdus starnbergensis 1
species Rhizorhabdus wittichii 27 16 1 2
species Rhizorhapis suberifaciens 1
species Rhizosphaericola mali 35 2 1
species Rhodanobacter denitrificans 1 5 1
species Rhodanobacter glycinis 9 2
species Rhodanobacter lindaniclasticus 1
species Rhodanobacter thiooxydans 1 1 1
species Rhodella violacea 1
species Rhodobacter apigmentum 18 1
species Rhodobacter capsulatus 49 1 2
species Rhodobacter gluconicum 21
species Rhodobacter maris 2
species Rhodobacter sp. CZR27 7 2
species Rhodobacter xanthinilyticus 6 3
species Rhodobacteraceae bacterium QY30 10 1
species Rhodobacteraceae bacterium SC52 4
species Rhodobiaceae bacterium 2 1
species Rhodobium gokarnense 7
species Rhodoblastus sp. 19
species Rhodococcoides fascians 4 35 1 1
species Rhodococcoides kroppenstedtii 1 6
species Rhodococcoides kyotonense 21
species Rhodococcoides yunnanense 2
species Rhodococcus baikonurensis 18
species Rhodococcus coprophilus 1 16
species Rhodococcus erythropolis 1 6 1 1
species Rhodococcus globerulus 1
species Rhodococcus jostii 6
species Rhodococcus opacus 1 65 3 1
species Rhodococcus oxybenzonivorans 3 1
species Rhodococcus phenolicus 11
species Rhodococcus pyridinivorans 1
species Rhodococcus qingshengii 7 3
species Rhodococcus rhodnii 5
species Rhodococcus rhodochrous 29 1
species Rhodococcus ruber 20 1
species Rhodococcus sp. ABRD24 20 1
species Rhodococcus sp. B7740 12 1
species Rhodococcus sp. H-CA8f 1
species Rhodococcus sp. LW-XY12 1
species Rhodococcus sp. MTM3W5.2 24
species Rhodococcus sp. P1Y 17 1 2
species Rhodococcus sp. PBTS 1 26 1 2
species Rhodococcus sp. SGAir0479 17
species Rhodococcus sp. USK10 1
species Rhodococcus sp. W8901 15 1
species Rhodococcus sp. WAY2 6
species Rhodococcus sp. WMMA185 19 1
species Rhodococcus sp. X156 62 1
species Rhodococcus sp. YL-1 1
species Rhodococcus triatomae 2
species Rhodocyclaceae bacterium 1
species Rhodocyclus purpureus 12
species Rhodocytophaga aerolata 38
species Rhodocytophaga rosea 50 1 1
species Rhodoferax antarcticus 349 4 57 1
species Rhodoferax aquaticus 1
species Rhodoferax ferrireducens 6 35 1
species Rhodoferax koreense 32 2
species Rhodoferax lithotrophicus 1
species Rhodoferax saidenbachensis 96
species Rhodoferax sediminis 59 1
species Rhodoferax sp. BAB1 17 2
species Rhodoligotrophos jinshengii 1
species Rhodoluna lacicola 2
species Rhodoluna limnophila 16
species Rhodomicrobium vannielii 32 1 2
species Rhodonellum psychrophilum 72
species Rhodophyticola sp. CCM32 2
species Rhodopila globiformis 1
species Rhodopirellula baltica 1
species Rhodopirellula sp. P2 2
species Rhodoplanes roseus 1
species Rhodoplanes sp. Z2-YC6860 26 1 2
species Rhodopseudomonas boonkerdii 3 2 1
species Rhodopseudomonas palustris 244 1 4 2
species Rhodopseudomonas pseudopalustris 1
species Rhodospira trueperi 9 1 1
species Rhodospirillaceae bacterium 55 6
species Rhodospirillaceae bacterium B3 121
species Rhodospirillum centenum 30 3 2
species Rhodospirillum rubrum 1 88 1
species Rhodospirillum sp. 1
species Rhodospirillum sp. UNK.MGS-17 1
species Rhodothalassium salexigens 18
species Rhodothermaceae bacterium 16
species Rhodothermaceae bacterium RA 28
species Rhodothermus clarus 4301 3 1 1
species Rhodothermus marinus 203 2 2 1
species Rhodotorula glutinis 1
species Rhodotorula graminis 5 1
species Rhodotorula mucilaginosa 2
species Rhodotorula taiwanensis 2
species Rhodotorula toruloides 1
species Rhodovastum atsumiense 1 2
species Rhodovibrio sodomensis 950
species Rhodovulum bhavnagarense 69
species Rhodovulum imhoffii 8
species Rhodovulum iodosum 1
species Rhodovulum lacipunicei 1
species Rhodovulum robiginosum 2
species Rhodovulum sp. MB263 6 1
species Rhodovulum sp. P5 10 3 1
species Rhodovulum sulfidophilum 3 2 1
species Rhodovulum visakhapatnamense 1
species Richelia sinica 1
species Rickettsia aeschlimannii 1
species Rickettsia akari 11 1
species Rickettsia australis 1
species Rickettsia bellii 1
species Rickettsia canadensis 4
species Rickettsia felis 3 1
species Rickettsia honei 153
species Rickettsia hoogstraalii 4
species Rickettsia hulinii 22 3
species Rickettsia limoniae 1
species Rickettsia marmionii Stenos et al. 2005 652 1
species Rickettsia massiliae 1
species Rickettsia monacensis 373 1
species Rickettsia montanensis 7
species Rickettsia peacockii 2 1
species Rickettsia rhipicephali 1
species Rickettsia rickettsii 1
species Rickettsia sibirica 2
species Rickettsia sp. PAR 23
species Rickettsia typhi 1 4
species Rickettsiales bacterium Ac37b 4 4
species Rickettsiales endosymbiont of Stachyamoeba lipophora 1 2
species Rickettsiella grylli 6
species Rickettsiella massiliensis 13
species Riemerella anatipestifer 82 4 3
species Riemerella columbipharyngis 4
species Rikenella microfusus 134 26 1 5
species Rikenellaceae bacterium 4
species Rippkaea orientalis 2
species Riquetophycus sp. 1
species Risungbinella pyongyangensis 68
species Rivibacter subsaxonicus 1
species Rivihabitans pingtungensis 11
species Rivularia atra 291 1
species Rivularia sp. PCC 7116 2
species Robbsia andropogonis 4 11
species Robertmurraya beringensis 1
species Robertmurraya siralis 2
species Robiginitalea biformata 3 81 1 2
species Robiginitalea myxolifaciens 3
species Robiginitomaculum antarcticum 10
species Robinsoniella peoriensis 1193 7 6 1 3 2
species Robinsoniella sp. KNHs210 125
species Rockefellervirus IPLA7 1
species Rockefellervirus PH15 3
species Rodentibacter haemolyticus 1
species Rodentibacter heylii 1 1
species Rodentibacter pneumotropicus 183 19 53 1
species Romboutsia hominis 241 28 1 16
species Romboutsia ilealis 378 263 29 3 16 1
species Romboutsia lituseburensis 123 11 4
species Romboutsia sedimentorum 1207 3
species Romboutsia sp. 13154 1
species Romboutsia sp. 13368 1
species Romboutsia sp. 13432 1
species Romboutsia sp. CE17 251 2 2
species Romboutsia sp. Marseille-P6047 1
species Romboutsia timonensis 6 10 9 8 4 1 1
species Roseateles chitosanitabidus 2
species Roseateles depolymerans 1 70
species Roseateles puraquae 7 3
species Roseateles saccharophilus 32
species Roseateles sp. DAIF2 1 1
species Roseburia cecicola 91 3 6 4 4
species Roseburia difficilis 4
species Roseburia faecis 4606 1346 579 16 3 9 9 3 9 7 2 3 2 1
species Roseburia hominis 1472 56 276 20 22 26 32 9 2 5 4 3 1
species Roseburia intestinalis 1 1411 648 278 19 13 28 32 11 3 3 1 1
species Roseburia inulinivorans 1 1457 589 252 16 27 26 9 9 7 4 1
species Roseburia lenta 3
species Roseburia porci 1 1 1
species Roseburia rectibacter 2 3
species Roseburia sp. 1 1 4
species Roseburia sp. 1120 2 1 26
species Roseburia sp. 11SE38 6 1
species Roseburia sp. 11SE39 2 109
species Roseburia sp. 499 1 28 3 1
species Roseburia sp. 831b 1
species Roseburia sp. A2-194 130 1
species Roseburia sp. AF02-12 1 3
species Roseburia sp. AF12-17LB 3 3
species Roseburia sp. AF15-21 3
species Roseburia sp. AF20-18LB 1 3 1
species Roseburia sp. AF22-2LB 3
species Roseburia sp. AF22-8AC 3
species Roseburia sp. AF25-13LB 3 1
species Roseburia sp. AF25-15LB 3
species Roseburia sp. AF25-18LB 3
species Roseburia sp. AF25-25LB 3
species Roseburia sp. AF34-16 3
species Roseburia sp. AF42-8 3 1
species Roseburia sp. AM16-25 2 3
species Roseburia sp. AM23-20 1 1 1
species Roseburia sp. AM51-8 3
species Roseburia sp. AM59-24XD 2 1
species Roseburia sp. CAG:100 2
species Roseburia sp. CAG:10041_57 2
species Roseburia sp. CAG:18 3
species Roseburia sp. CAG:18_43_25 3
species Roseburia sp. CAG:182 2
species Roseburia sp. CAG:197 1
species Roseburia sp. CAG:197_41_10 1
species Roseburia sp. CAG:303 1 1
species Roseburia sp. CAG:380 2
species Roseburia sp. CAG:45 3
species Roseburia sp. CAG:50 4
species Roseburia sp. CLA-AA-H204 3 1
species Roseburia sp. CLA-AA-H209 3 1
species Roseburia sp. DJF_RR73 59 1
species Roseburia sp. DJF_VR77 1
species Roseburia sp. MC_37 1 26
species Roseburia sp. MSJ-14 1
species Roseburia sp. OF03-24 2 1
species Roseburia sp. OM02-15 4
species Roseburia sp. OM03-18 3
species Roseburia sp. OM03-7AC 3
species Roseburia sp. OM04-10AA 3
species Roseburia sp. OM04-10BH 3
species Roseburia sp. OM04-15AA 3
species Roseburia sp. TF10-5 2 4 3 1
species Roseburia yibonii 2 1
species Roseburia zhanii 4 1
species Roseiarcus fermentans 5
species Roseibacterium beibuensis 3
species Roseibacterium elongatum 1 1 1
species Roseibium aggregatum 1
species Roseibium alexandrii 1
species Roseicitreum antarcticum 2
species Roseiflexus castenholzii 21 69 1
species Roseiflexus sp. RS-1 47 1 2
species Roseimarinus sediminis 34
species Roseimaritima multifibrata 1 2
species Roseimaritima ulvae 9 2
species Roseimicrobium gellanilyticum 74 2
species Roseimicrobium sp. ORNL1 95 2
species Roseitalea porphyridii 15 1
species Roseivirga ehrenbergii 1
species Roseivirga pacifica 39
species Roseivirga spongicola 32
species Roseivivax marinus 4
species Roseivivax sp. THAF30 23
species Rosenbergiella nectarea 182
species Roseobacter denitrificans 3 2 1
species Roseobacter litoralis 1
species Roseobacter ponti 14
species Roseococcus microcysteis 3
species Roseococcus suduntuyensis 2
species Roseococcus thiosulfatophilus 52 37 3
species Roseomonas fluvialis 1
species Roseomonas gilardii 35 2 1
species Roseomonas haemaphysalidis 2
species Roseomonas marmotae 1
species Roseomonas massiliensis 131
species Roseomonas mucosa 8 10
species Roseomonas pecuniae 2
species Roseomonas sp. AR75 1
species Roseomonas sp. FDAARGOS_362 1
species Roseomonas sp. OT10 1
species Roseomonas terpenica 11
species Roseospira mediosalina 388
species Roseospira navarrensis 1
species Roseospira thiosulfatophila 66
species Roseospira visakhapatnamensis 16
species Roseovarius aestuarii 3
species Roseovarius antarcticus 3
species Roseovarius azorensis 1
species Roseovarius faecimaris 5 1
species Roseovarius indicus 11
species Roseovarius marisflavi 1
species Roseovarius mucosus 1
species Roseovarius sp. THAF9 5 1
species Roseovarius tolerans 2
species Rosistilla oblonga 2
species Rossellomorea aquimaris 7
species Rossellomorea marisflavi 3 166 1 1 2
species Rossellomorea vietnamensis 7 70 2
species Rothia aeria 58 21 7 182 1 1 2
species Rothia amarae 6 1
species Rothia dentocariosa 235 109 29 242 2 6 3 1 1 2
species Rothia endophytica 1
species Rothia halotolerans 4
species Rothia koreensis 14
species Rothia kristinae 6 6 1
species Rothia mucilaginosa 890 498 74 264 5 13 1 2 1 2
species Rothia nasimurium 1
species Rothia sp. (in: high G+C Gram-positive bacteria) 1
species Rothia sp. HMSC062F03 1
species Rothia sp. HMSC065C03 1
species Rothia sp. HMSC066G07 1
species Rothia sp. HMSC068F09 1
species Rothia sp. HMSC069C03 1
species Rothia sp. HMSC072B03 1 1
species Rothia sp. HMSC072E10 1
species Rothia sp. HSID18067 1
species Rothia sp. HSID18069 1
species Rothia sp. Olga 1
species Rothia sp. SD9660Na 1
species Rothia sp. T40-1 35
species Rothia sp. THG-N7 50
species Rothia sp. THG-T3 3
species Rothia terrae 4 2
species Rotylenchulus reniformis 1
species Rouxiella badensis 27 2
species Rouxiella chamberiensis 2
species Ruania alkalisoli 1
species Ruania halotolerans 1
species Ruania zhangjianzhongii 35 2
species Rubellimicrobium aerolatum 133 1
species Rubellimicrobium mesophilum 3
species Rubellimicrobium roseum 7
species Rubellimicrobium thermophilum 14
species Rubidibacter lacunae 6 1
species Rubidimonas crustatorum 111
species Rubinisphaera brasiliensis 4 2
species Rubneribacter badeniensis 1 1 1 1 1
species Rubribacterium polymorphum 1
species Rubrimonas cliftonensis 5
species Rubripirellula lacrimiformis 2
species Rubritalea marina 3 11
species Rubritalea profundi 1
species Rubritalea sabuli 14 2
species Rubritalea spongiae 8
species Rubritalea tangerina 40 163
species Rubritepida sp. MDT2-1-1 1
species Rubrivivax benzoatilyticus 4 3
species Rubrivivax gelatinosus 10 1 106 1 1 1
species Rubrobacter aplysinae 5
species Rubrobacter bracarensis 51 4
species Rubrobacter indicoceani 1
species Rubrobacter marinus 29 2
species Rubrobacter radiotolerans 2 44 16 2 2 1
species Rubrobacter taiwanensis 15 46
species Rubrobacter tropicus 33 1 2
species Rubrobacter xylanophilus 6 95 1 2
species Rudaea cellulosilytica 7
species Rudanella lutea 15
species Ruegeria arenilitoris 1
species Ruegeria lacuscaerulensis 7
species Ruegeria pomeroyi 1 1 1
species Ruegeria sp. THAF33 1
species Ruegeria sp. TM1040 1
species Rufibacter glacialis 2
species Rufibacter radiotolerans 79 4 1
species Rufibacter sp. DG15C 31 1
species Rufibacter tibetensis 45 48 2 2
species Ruficoccus sp. ZRK36 2
species Rugamonas sp. DEMB1 1
species Rugosibacter aromaticivorans 3 2
species rumen bacterium NK4A214 1 6
species Ruminiclostridium cellobioparum 3378 83 2 4
species Ruminiclostridium cellulolyticum 1680 2 246 2 5 2 1
species Ruminiclostridium herbifermentans 2 3
species Ruminiclostridium hungatei 36 1 2 1
species Ruminiclostridium papyrosolvens 481 1 1 1 3 1
species Ruminiclostridium sp. 2
species Ruminiclostridium sufflavum 12 2 1
species Ruminobacter amylophilus 76 81
species Ruminococcaceae bacterium 1 4
species Ruminococcaceae bacterium AF10-16 3 8 4
species Ruminococcaceae bacterium AM07-15 3 1
species Ruminococcaceae bacterium AM28-23LB 7 1
species Ruminococcaceae bacterium BL-6 1
species Ruminococcaceae bacterium CG7 1
species Ruminococcaceae bacterium CPB6 65 4
species Ruminococcaceae bacterium cv2 8 4
species Ruminococcaceae bacterium D16 25 1 1
species Ruminococcaceae bacterium D5 1 4
species Ruminococcaceae bacterium LM158 1
species Ruminococcaceae bacterium Marseille-P2935 1
species Ruminococcaceae bacterium TF06-43 6 8 4
species Ruminococcaceae bacterium UBA1691 1
species Ruminococcaceae bacterium UBA3269 2
species Ruminococcaceae bacterium UBA3315 2
species Ruminococcaceae bacterium UBA5891 1
species Ruminococcaceae bacterium UBA7105 2
species Ruminococcaceae bacterium UCG-005 3
species Ruminococcaceae bacterium YAD3003 3
species Ruminococcus albus 3848 1433 263 24 2 2 28 9 1 2 3 3 2 1
species Ruminococcus bicirculans (ex Wegman et al. 2014) 1 274 14 16 17 30 15 3 3 1
species Ruminococcus bovis 269 2 3 1
species Ruminococcus bromii 3769 1499 2 82 15 19 19 9 6 4 4 4 2 1 1
species Ruminococcus callidus 2659 1283 1 5 6 8 6 7 5 3 2 1
species Ruminococcus champanellensis 1188 268 26 11 31 8 1
species Ruminococcus difficilis 1
species Ruminococcus flavefaciens 748 1155 1 80 4 7 10 1 2 1
species Ruminococcus gauvreauii 579 13 6 1 3 1 4 1 3 1 1
species Ruminococcus hominis 2 1
species Ruminococcus intestinalis 1
species Ruminococcus sp. 1 1 1 1 4
species Ruminococcus sp. 1001095IJ_161003_G2 4
species Ruminococcus sp. 1001136B_160425_D2 4
species Ruminococcus sp. 1001175B_160314_E1 1
species Ruminococcus sp. 1001262B_160229_C12 2
species Ruminococcus sp. 1001270H_150608_F2 1 1
species Ruminococcus sp. 1001275B_160808_F8 4
species Ruminococcus sp. 1001713B170207_170306_F1 4
species Ruminococcus sp. 1001713B170207_170306_F5 2 1
species Ruminococcus sp. 1001713B170214_170313_A12 4
species Ruminococcus sp. 14531 1 2
species Ruminococcus sp. 210702-SL.1.03 1
species Ruminococcus sp. 5_1_39BFAA 1 17 4
species Ruminococcus sp. 653 26
species Ruminococcus sp. A254.MGS-108 2
species Ruminococcus sp. A254.MGS-254 1
species Ruminococcus sp. AF12-5 4 1
species Ruminococcus sp. AF13-28 1
species Ruminococcus sp. AF13-37 1
species Ruminococcus sp. AF14-10 4
species Ruminococcus sp. AF14-5 4
species Ruminococcus sp. AF16-40 1 2
species Ruminococcus sp. AF16-50 3
species Ruminococcus sp. AF17-11 2 1
species Ruminococcus sp. AF17-12 4
species Ruminococcus sp. AF17-1AC 3
species Ruminococcus sp. AF17-22AC 4
species Ruminococcus sp. AF17-24 3
species Ruminococcus sp. AF17-6 3
species Ruminococcus sp. AF17-6LB 3
species Ruminococcus sp. AF18-22 2
species Ruminococcus sp. AF18-29 3
species Ruminococcus sp. AF19-15 3 1
species Ruminococcus sp. AF19-29 4
species Ruminococcus sp. AF19-4LB 4
species Ruminococcus sp. AF20-12LB 4
species Ruminococcus sp. AF21-11 3 1
species Ruminococcus sp. AF21-3 1 1
species Ruminococcus sp. AF21-42 1
species Ruminococcus sp. AF24-16 4
species Ruminococcus sp. AF24-32LB 1
species Ruminococcus sp. AF25-13 4
species Ruminococcus sp. AF25-17 4
species Ruminococcus sp. AF25-19 3 1
species Ruminococcus sp. AF25-23LB 1 4
species Ruminococcus sp. AF25-28AC 4
species Ruminococcus sp. AF25-3LB 4
species Ruminococcus sp. AF26-25AA 3
species Ruminococcus sp. AF27-11AA 4
species Ruminococcus sp. AF27-12AA 4
species Ruminococcus sp. AF27-3 4
species Ruminococcus sp. AF31-14BH 4
species Ruminococcus sp. AF31-16BH 1
species Ruminococcus sp. AF31-8BH 2 4 1
species Ruminococcus sp. AF32-2AC 4
species Ruminococcus sp. AF33-11BH 4
species Ruminococcus sp. AF34-12 3
species Ruminococcus sp. AF37-20 3
species Ruminococcus sp. AF37-3AC 2 1
species Ruminococcus sp. AF37-6AT 1
species Ruminococcus sp. AF41-9 2
species Ruminococcus sp. AF42-10 2
species Ruminococcus sp. AF42-9BH 1
species Ruminococcus sp. AF43-11 2 1
species Ruminococcus sp. AF45-4BH 4
species Ruminococcus sp. AF46-10NS 1
species Ruminococcus sp. AM07-21 1
species Ruminococcus sp. AM09-18-1 4 1
species Ruminococcus sp. AM12-48 4
species Ruminococcus sp. AM16-34 4
species Ruminococcus sp. AM18-15 4 1
species Ruminococcus sp. AM18-44 4
species Ruminococcus sp. AM22-13 1 1
species Ruminococcus sp. AM22-14LB 4
species Ruminococcus sp. AM23-1 3 4
species Ruminococcus sp. AM23-1LB 4
species Ruminococcus sp. AM26-12LB 4 1
species Ruminococcus sp. AM27-11LB 4
species Ruminococcus sp. AM27-16 4
species Ruminococcus sp. AM27-27 4
species Ruminococcus sp. AM28-13 3
species Ruminococcus sp. AM28-29LB 2
species Ruminococcus sp. AM28-41 1 1
species Ruminococcus sp. AM29-1 4
species Ruminococcus sp. AM29-10LB 4
species Ruminococcus sp. AM29-12LB 2 4 1
species Ruminococcus sp. AM29-19LB 4
species Ruminococcus sp. AM29-1LB 4
species Ruminococcus sp. AM29-26 1 1
species Ruminococcus sp. AM29-5AC 4
species Ruminococcus sp. AM30-15AC 1
species Ruminococcus sp. AM31-15AC 3
species Ruminococcus sp. AM31-32 2 2
species Ruminococcus sp. AM32-17LB 4
species Ruminococcus sp. AM33-14 4
species Ruminococcus sp. AM34-10LB 2 1
species Ruminococcus sp. AM34-9LB 4
species Ruminococcus sp. AM36-17 4
species Ruminococcus sp. AM36-18 2 1
species Ruminococcus sp. AM36-2AA 1
species Ruminococcus sp. AM36-5 1
species Ruminococcus sp. AM40-10AC 4 1
species Ruminococcus sp. AM41-10BH 1
species Ruminococcus sp. AM41-2AC 4
species Ruminococcus sp. AM42-10AC 4 1
species Ruminococcus sp. AM42-11 4 1
species Ruminococcus sp. AM43-6 3
species Ruminococcus sp. AM44-9AT 4
species Ruminococcus sp. AM45-2 4
species Ruminococcus sp. AM45-9BH 4
species Ruminococcus sp. AM46-18 4
species Ruminococcus sp. AM47-2BH 3
species Ruminococcus sp. AM49-10BH 4
species Ruminococcus sp. AM49-8 4
species Ruminococcus sp. AM50-15BH 4
species Ruminococcus sp. AM54-14NS 4
species Ruminococcus sp. AM54-1NS 3
species Ruminococcus sp. AM57-5 4
species Ruminococcus sp. AM58-7XD 1 1
species Ruminococcus sp. B05 2
species Ruminococcus sp. BSD2780120874_150323_B10 1
species Ruminococcus sp. CAG:108 2
species Ruminococcus sp. CAG:108-related_41_35 2
species Ruminococcus sp. CAG:17 1
species Ruminococcus sp. CAG:177 3
species Ruminococcus sp. CAG:254 1
species Ruminococcus sp. CAG:55 4
species Ruminococcus sp. CAG:57 3
species Ruminococcus sp. CAG:60 4
species Ruminococcus sp. CAG:9 4
species Ruminococcus sp. CAG:90 4
species Ruminococcus sp. CS1 1
species Ruminococcus sp. D40t1_170626_H2 4 1
species Ruminococcus sp. D54t1_190329_F1 4 1
species Ruminococcus sp. D55t1_190419_H1 4
species Ruminococcus sp. DJF_VR66 5
species Ruminococcus sp. DJF_VR70k1 1 17
species Ruminococcus sp. DSM 100440 1
species Ruminococcus sp. FC2018 1
species Ruminococcus sp. ID1 20
species Ruminococcus sp. J1101004_170508_H5 4 1
species Ruminococcus sp. JC304 5 4
species Ruminococcus sp. K-1 1 3
species Ruminococcus sp. KGMB03662 3
species Ruminococcus sp. Marseille-P328 2 1 2 4
species Ruminococcus sp. Marseille-P6503 1
species Ruminococcus sp. MC_38 1
species Ruminococcus sp. MCC718 4
species Ruminococcus sp. MSJ-25 3
species Ruminococcus sp. N15.MGS-57 3
species Ruminococcus sp. NK3A76 1 1
species Ruminococcus sp. OF02-6 4 1
species Ruminococcus sp. OF03-6AA 1
species Ruminococcus sp. OF05-2BH 4
species Ruminococcus sp. OM02-16LB 4 1
species Ruminococcus sp. OM04-4AA 4
species Ruminococcus sp. OM05-7 4
species Ruminococcus sp. OM06-36AC 1 2
species Ruminococcus sp. OM07-17 3
species Ruminococcus sp. OM07-7 4 1
species Ruminococcus sp. OM08-13AT 4
species Ruminococcus sp. OM08-7 1 1
species Ruminococcus sp. OM08-9BH 1
species Ruminococcus sp. RLB3 1 1 2
species Ruminococcus sp. SR1/5 280 2 1 4
species Ruminococcus sp. TF06-23 4
species Ruminococcus sp. TF08-4 4 1
species Ruminococcus sp. TF10-12AC 4
species Ruminococcus sp. TF10-6 4
species Ruminococcus sp. TF11-2AC 4
species Ruminococcus sp. TF12-19AC 2
species Ruminococcus sp. TF12-2 3
species Ruminococcus sp. TM09-4 4
species Ruminococcus sp. TM10-9AT 1
species Ruminococcus sp. TM463 3
species Ruminococcus sp. UNK.MGS-30 1
species Ruminococcus sp. W22 1 12
species Ruminococcus sp. WAL 17306 1 10
species Ruminococcus sp. YE281 1 15
species Ruminococcus sp. ZS2-15 1 4
species Ruminococcus turbiniformis 1
species Ruminofilibacter xylanolyticum 1
species Rummeliibacillus pycnus 20
species Rummeliibacillus stabekisii 4 30 1 2
species Runella defluvii 31
species Runella limosa 1796 1 5
species Runella rosea 12 3 2
species Runella slithyformis 2 44 73 2
species Runella sp. SP2 29 1 2
species Runella zeae 1
species Ruoffia tabacinasalis 82 128 2
species Ruthenibacterium lactatiformans 1 274 15 23 8 30 2 11 4 3 1 1
species Ruthenibacterium sp. 4
species Saccharibacillus brassicae 231 1 1 2
species Saccharibacter floricola 14
species Saccharicrinis carchari 33
species Saccharicrinis fermentans 7 1
species Saccharina sp. ye-G 1
species Saccharobesus litoralis 1 1
species Saccharofermentans acetigenes 186 1 1
species Saccharofermentans sp. G8 1 1
species Saccharolobus caldissimus 1
species Saccharomonospora glauca 1
species Saccharomonospora marina 1
species Saccharomonospora thermoviridis 21
species Saccharomonospora viridis 339 14 2 2
species Saccharomonospora xinjiangensis 17
species Saccharomyces bayanus 4
species Saccharomyces boulardii (nom. inval.) 4
species Saccharomyces cerevisiae 70 12 7 1 5 3
species Saccharomyces eubayanus 1 8
species Saccharomyces jurei 2 1
species Saccharomyces kudriavzevii 1 1
species Saccharomyces paradoxus 5 8 1
species Saccharomyces pastorianus 7 1
species Saccharophagus degradans 1 1
species Saccharopolyspora antimicrobica 1 2
species Saccharopolyspora cebuensis 475 137 2
species Saccharopolyspora erythraea 2 15 1 1
species Saccharopolyspora flava 6 4 1 1
species Saccharopolyspora gregorii 3 1
species Saccharopolyspora halophila 2
species Saccharopolyspora pathumthaniensis 4
species Saccharopolyspora rectivirgula 1 1
species Saccharopolyspora rosea 2
species Saccharopolyspora shandongensis 638
species Saccharopolyspora sp. ASAGF58 49
species Saccharopolyspora spinosa 1 1
species Saccharopolyspora taberi 1
species Saccharospirillum impatiens 3 14
species Saccharospirillum mangrovi 30 2
species Saccharospirillum salsuginis 2
species Saccharothrix carnea 1
species Saccharothrix espanaensis 10 1 1
species Saccharothrix sp. 6-C 1
species Saccharothrix syringae 29 1
species Saccharothrix tamanrassetensis 1
species Saccharothrix variisporea 4
species Sagittula sp. P11 38 1
species Salaquimonas pukyongi 22 1
species Salarchaeum sp. JOR-1 1 1
species Salegentibacter mishustinae 2
species Salegentibacter salegens 3 3
species Salegentibacter sp. T436 9 1
species Salibacterium aidingense 9
species Salibacterium qingdaonense 7
species Salibacterium salarium 1
species Salicibibacter cibarius 2
species Salicibibacter cibi 2
species Salicibibacter halophilus 1 1
species Salicibibacter kimchii 3 1 2
species Salicola marasensis 3
species Salidesulfovibrio brasiliensis 624
species Salidesulfovibrio onnuriiensis 230 1 2
species Salimicrobium album 5
species Salimicrobium flavidum 1
species Salimicrobium jeotgali 137 1 2 2
species Salinactinospora qingdaonensis 8
species Salinadaptatus halalkaliphilus 43
species Salinarchaeum sp. Harcht-Bsk1 1 1
species Salinibacillus aidingensis 9
species Salinibacter ruber 2 105 1 2
species Salinibacterium amurskyense 4 1
species Salinibacterium hongtaonis 9 1
species Salinibacterium sp. dk2585 18 1
species Salinibacterium sp. UTAS2018 15
species Salinibacterium sp. ZJ450 1
species Salinibacterium xinjiangense 14
species Salinibaculum litoreum 1
species Salinicoccus albus 68
species Salinicoccus carnicancri 31
species Salinicoccus halitifaciens 3
species Salinicoccus halodurans 4 92 3 2
species Salinicoccus hispanicus 9 43
species Salinicoccus iranensis 134 4 1
species Salinicoccus luteus 2003 26 1
species Salinicoccus roseus 16
species Salinicoccus salsiraiae 18
species Salinicoccus sp. BAB 3246 63
species Salinicola halophilus 2
species Salinicola tamaricis 18
species Salinifilum ghardaiensis 18
species Salinimicrobium terrae 9 4
species Salinimicrobium tongyeongense 1
species Salinimonas chungwhensis 1
species Salinimonas iocasae 1 1
species Salinimonas lutimaris 22 1
species Salinimonas marina 1
species Salinimonas sediminis 3
species Salininema proteolyticum 1
species Saliniradius amylolyticus 2 1 2
species Salinirubellus salinus 2
species Salinisphaera japonica 2
species Salinisphaera sp. LB1 20 1 2
species Salinispira pacifica 90 2 2
species Salinispirillum marinum 358
species Salinispora arenicola 5 1
species Salinispora tropica 1 17 1 1
species Salinivibrio budaii 125 4
species Salinivibrio costicola 5 7
species Salinivibrio kushneri 3
species Salinivirga cyanobacteriivorans 99 1 2
species Salipaludibacillus agaradhaerens 1
species Salipiger abyssi 17 1
species Salipiger profundus 23 1
species Salipiger sp. CCB-MM3 13 3 1
species Salisaeta longa 950 133 1
species Salisediminibacterium beveridgei 75 3 2
species Salisediminibacterium selenitireducens 17 23 1 2
species Salmo salar 1
species Salmonella bongori 24 3 2
species Salmonella enterica 425 34 3 273 27 13 2 30 1 2 2 2 1
species Salmonella phage 29485 1
species Salmonella phage 5 1
species Salmonella phage DaR-2019a 1
species Salmonella phage Stp1 1
species Salmonella sp. 1 20 15
species Salmonella sp. 111 1
species Salmonella sp. gx-f5 1
species Salmonella sp. HNK130 3
species Salmonella sp. S13 12 3
species Salmonella sp. SCFS4 1
species Salmonella sp. SSDFZ54 3
species Salpingoeca rosetta 1
species Salsuginibacillus halophilus 3
species Salsuginibacillus kocurii 1
species Salvelinus alpinus 1
species Sandaracinobacter sibiricus 9
species Sandaracinobacteroides saxicola 1
species Sandaracinus amylolyticus 16 57 2
species Sandinevirus BK5T 1
species Sanguibacter keddieii 22 1 2
species Sanguibacter sp. HDW7 25
species Sanguibacter suarezii 9 1
species Sanguibacteroides justesenii 3
species Saprochaete ingens 2
species Saprospira grandis 15 1 1
species Saprospiraceae bacterium 23
species Sarcina maxima 2511 10 2 4
species Sarcina sp. JB2 2 2
species Sarcina ventriculi 96 55 13 1 2
species Savagea faecisuis 4
species Scandinavium goeteborgense 48 1
species Scardovia inopinata 3 69 1 2
species Scardovia wiggsiae 158 65 8
species Scedosporium apiospermum 1
species Schaalia canis 8 9
species Schaalia cardiffensis 69 1 104 2
species Schaalia funkei 4
species Schaalia georgiae 77 58 6
species Schaalia hyovaginalis 7 9 1
species Schaalia meyeri 241 8 1 226 1 1 2
species Schaalia naturae 806 89 2 5
species Schaalia odontolytica 1362 796 451 269 6 11 1 2 1 5 4 2
species Schaalia radingae 110 47 43 171 2
species Schaalia sp. 19OD2882 2
species Schaalia sp. JY-X169 42 2
species Schaalia sp. ZJ405 2
species Schaalia suimastitidis 7 341
species Schaalia turicensis 461 89 65 2 2 1 2 3 1 2
species Schaalia vaccimaxillae 7 52
species Schaedlerella arabinosiphila 3 1
species Scheffersomyces stipitis 8 6
species Schinkia azotoformans 1
species Schistosoma haematobium 1
species Schistosoma mansoni 2
species Schizocladia ischiensis 1
species Schizophyllum commune 1
species Schizosaccharomyces pombe 8 6
species Schlegelella aquatica 196 1
species Schlegelella sp. P-bf-PMW-1 2
species Schleiferia thermophila 20
species Schleiferilactobacillus harbinensis 1 81 2
species Schleiferilactobacillus perolens 26 2
species Schlesneria paludicola 1
species Schnuerera ultunensis 12 43 2 1
species Schumannella luteola 1
species Schwartzia succinivorans 23
species Sclerogaster xerophilus 1
species Sclerotinia sclerotiorum 1
species Scopulibacillus darangshiensis 3 1
species Scytonema sp. HK-05 1
species Scytonema sp. NIES-4073 2
species Sebaldella termitidis 7 3 161 1 4 2
species secondary endosymbiont of Ctenarytaina eucalypti 4 1
species secondary endosymbiont of Heteropsylla cubana 2 1
species secondary endosymbiont of Heteropsylla texana 1
species secondary endosymbiont of Trabutina mannipara 1
species Secundilactobacillus collinoides 7
species Secundilactobacillus malefermentans 2 39 11 1
species Secundilactobacillus oryzae 88
species Secundilactobacillus paracollinoides 12 2
species Secundilactobacillus similis 14
species Sedimentibacter hongkongensis 356 159
species Sedimentibacter hydroxybenzoicus 4495 163 4 5 7
species Sedimentibacter saalensis 388 76 3
species Sedimentibacter sp. zth1 2 2
species Sedimenticola selenatireducens 1 1
species Sedimenticola thiotaurini 8 45 2 2
species Sedimentisphaera cyanobacteriorum 17 3 1
species Sedimentisphaera salicampi 3 2 2
species Sediminibacillus dalangtanensis 2
species Sediminibacillus halophilus 15
species Sediminibacillus massiliensis 1
species Sediminibacterium ginsengisoli 11
species Sediminibacterium lactis 12
species Sediminibacterium salmoneum 5 1
species Sediminibacterium sp. TEGAF015 2
species Sediminicoccus rosea 1
species Sediminicola sp. YIK13 2 1
species Sediminispirochaeta bajacaliforniensis 21
species Sediminispirochaeta smaragdinae 4 87 1 2
species Sediminitomix flava 101 2 1
species Segatella albensis 1396 665 8 1 2
species Segatella baroniae 26 570 2 1
species Segatella bryantii 12 248 3 1 1 3 1
species Segatella buccae 265 191 14 1
species Segatella copri 4320 1284 38 36 3 16 9 4 7 6 4 3 3 1 1
species Segatella hominis 1 2 1
species Segatella maculosa 611 322 1 3 6 1
species Segatella oris 31 223 7 264 5 9 2
species Segatella oulorum 661 326 2
species Segatella paludivivens 1114 370 1 6 1
species Segatella salivae 62 18 1
species Segetibacter aerophilus 607 42 1
species Segetibacter koreensis 4 5
species Segniliparus rotundus 3 16 2 1 1
species Segniliparus rugosus 38
species Seinonella peptonophila 61
species Selenihalanaerobacter shriftii 112 2
species Selenomonas artemidis 638 41
species Selenomonas bovis 12 5
species Selenomonas dianae 4 4
species Selenomonas flueggei 22 49
species Selenomonas genomosp. P5 4
species Selenomonas infelix 4423 10 1 5
species Selenomonas lacticifex 49 2
species Selenomonas noxia 28 11
species Selenomonas ruminantium 2 43 262 10 2 29 3 1
species Selenomonas sp. oral taxon 126 241 1
species Selenomonas sp. oral taxon 136 115 1 2
species Selenomonas sp. oral taxon 478 154 1 2
species Selenomonas sp. oral taxon 920 204 4 2
species Selenomonas sp. Ycb08 5
species Selenomonas sputigena 87 2 251 3 3 1 3
species Sellimonas intestinalis 3 4 2 1 7 3 1
species Seminibacterium arietis 13
species Senegalia massiliensis 1
species Senegalimassilia anaerobia 486 2 3 11 1 2
species Senegalimassilia sp. 2
species Seohaeicola saemankumensis 3
species Seonamhaeicola sp. ML3 1
species Seonamhaeicola sp. S2-3 3 2 1
species Sepunavirus IPLAC1C 1
species Serinicoccus chungangensis 68 5
species Serinicoccus hydrothermalis 13 3
species Serinicoccus marinus 11 21 13
species Serinicoccus profundi 9 1
species Serpentinicella alkaliphila 1 1
species Serpentinimonas maccroryi 19 1
species Serpentinimonas raichei 34 2
species Serratia entomophila 3429 2 1 1 1
species Serratia ficaria 45 6 2
species Serratia fonticola 75 2
species Serratia grimesii 10
species Serratia inhibens 1
species Serratia liquefaciens 26 1 1
species Serratia marcescens 357 2 1 236 21 3 22 9 2
species Serratia nematodiphila 21 1
species Serratia odorifera 37 1
species Serratia plymuthica 87 4 2
species Serratia proteamaculans 17 2
species Serratia quinivorans 7
species Serratia rhizosphaerae 5
species Serratia rubidaea 1 15 2
species Serratia sp. 1D1416 1
species Serratia sp. 3ACOL1 4 1
species Serratia sp. FGI94 6 1 1
species Serratia sp. FS14 5
species Serratia sp. JSRIV004 1
species Serratia sp. MYb239 2
species Serratia sp. P2ACOL2 3 1
species Serratia sp. ST9 3
species Serratia sp. YD25 1
species Serratia surfactantfaciens 7 1
species Serratia symbiotica 18 25 46 1 1
species Serratia ureilytica 10 80 1
species Sextaecvirus SEP9 1
species Sextaecvirus sextaec 1
species Shackletoniella antarctica 17
species Shamshuipovirus HK022 1
species Sharpea azabuensis 2098 75 1 1 2 1
species Shewanella aestuarii 10 11 1
species Shewanella algae 4 13 2
species Shewanella amazonensis 1 18 16
species Shewanella avicenniae 2
species Shewanella baltica 5 8 3 1
species Shewanella benthica 3 1
species Shewanella chilikensis 5 1
species Shewanella corallii 44
species Shewanella cyperi 1
species Shewanella decolorationis 11 2
species Shewanella denitrificans 1 1
species Shewanella dokdonensis 1
species Shewanella donghaensis 1 1 1 1
species Shewanella electrodiphila 11
species Shewanella frigidimarina 2
species Shewanella gaetbuli 5
species Shewanella halifaxensis 11 2 1
species Shewanella insulae 1
species Shewanella inventionis 1
species Shewanella irciniae 42 31
species Shewanella japonica 1 1
species Shewanella khirikhana 52 1
species Shewanella livingstonensis 1
species Shewanella loihica 9 1
species Shewanella marisflavi 9 2
species Shewanella maritima 1 1
species Shewanella mesophila 1
species Shewanella morhuae 1
species Shewanella olleyana 4 23
species Shewanella oneidensis 16 3
species Shewanella pealeana 4 1
species Shewanella piezotolerans 1
species Shewanella pneumatophori 204 1
species Shewanella profunda 23 3
species Shewanella psychromarinicola 2 1
species Shewanella psychrophila 1
species Shewanella putrefaciens 7 9 9
species Shewanella rhizosphaerae 1 1
species Shewanella sedimentimangrovi 1
species Shewanella sediminis 3 1 1 1
species Shewanella seohaensis 1 1
species Shewanella sp. KX20019 1 2
species Shewanella sp. MTB7 2
species Shewanella sp. OMA3-2 1
species Shewanella sp. Scap07 1
species Shewanella sp. SNU WT4 1 2
species Shewanella sp. WE21 1 1
species Shewanella upenei 1273 1
species Shewanella vesiculosa 130
species Shewanella violacea 1 3 1
species Shewanella woodyi 3 2
species Shewanella xiamenensis 1
species Shigella boydii 79 1 1 3 1
species Shigella dysenteriae 365 92 4 1 1 3 2
species Shigella flexneri 1 90 20 3 4 6 3 2
species Shigella genomosp. SF-2015 1
species Shigella phage CM1 4
species Shigella phage Silverhawkium 1
species Shigella sonnei 58 2 2 3 1 1
species Shigella sp. 1 1 3
species Shigella sp. 4104 1
species Shigella sp. CLA-AA-H239 3
species Shigella sp. FC1056 3
species Shigella sp. FC1139 3
species Shigella sp. FC1172 3
species Shigella sp. FC1180 3
species Shigella sp. FC1544 3
species Shigella sp. FC1567 3
species Shigella sp. FC1661 3
species Shigella sp. FC1708 3
species Shigella sp. FC1737 3
species Shigella sp. FC1764 3
species Shigella sp. FC1882 3
species Shigella sp. FC2045 3
species Shigella sp. FC2117 3
species Shigella sp. FC2125 3
species Shigella sp. FC2175 3
species Shigella sp. FC2383 3
species Shigella sp. FC2531 3
species Shigella sp. FC2541 3
species Shigella sp. FC2710 3
species Shigella sp. FC2833 3
species Shigella sp. FC2928 3
species Shigella sp. FC3196 3
species Shigella sp. FC569 3
species Shigella sp. FC6481 3
species Shigella sp. FC6482 3
species Shigella sp. FC6484 3
species Shigella sp. FC6485 3
species Shigella sp. FC6487 3
species Shigella sp. FC6488 3
species Shigella sp. FC6490 3
species Shigella sp. FC6491 3
species Shigella sp. FC6492 3
species Shigella sp. FC6493 3
species Shigella sp. FC6494 3
species Shigella sp. FC6495 3
species Shigella sp. FC6496 3
species Shigella sp. FC6498 3
species Shigella sp. FC6499 3
species Shigella sp. FC6500 3
species Shigella sp. FC6502 3
species Shigella sp. FC6505 3
species Shigella sp. FC6506 3
species Shigella sp. FC6507 3
species Shigella sp. FC6508 3
species Shigella sp. FC6509 3
species Shigella sp. FC6510 3
species Shigella sp. FC6511 3
species Shigella sp. FC6512 3
species Shigella sp. FC6513 3
species Shigella sp. FC6514 3
species Shigella sp. FC6515 3
species Shigella sp. FC6516 3
species Shigella sp. FC6517 3
species Shigella sp. FC6518 3
species Shigella sp. FC6519 3
species Shigella sp. FC6520 3
species Shigella sp. FC6521 3
species Shigella sp. FC6522 3
species Shigella sp. FC6523 3
species Shigella sp. FC6524 3
species Shigella sp. FC6525 3
species Shigella sp. FC6527 3
species Shigella sp. FC6528 3
species Shigella sp. FC6529 3
species Shigella sp. FC6532 3
species Shigella sp. FC6533 3
species Shigella sp. FC6534 3
species Shigella sp. FC6535 3
species Shigella sp. FC6536 3
species Shigella sp. FC6537 3
species Shigella sp. FC6538 3
species Shigella sp. FC6539 3
species Shigella sp. FC6540 3
species Shigella sp. FC6541 3
species Shigella sp. FC6542 3
species Shigella sp. FC6543 3
species Shigella sp. FC6544 3
species Shigella sp. FC6545 3
species Shigella sp. FC6546 3
species Shigella sp. FC6547 3
species Shigella sp. FC6548 3
species Shigella sp. FC6549 3
species Shigella sp. FC6550 3
species Shigella sp. FC6553 3
species Shigella sp. FC6554 3
species Shigella sp. FC6555 3
species Shigella sp. FC6556 3
species Shigella sp. FC6557 3
species Shigella sp. GCP5 3
species Shigella sp. MO17 1
species Shigella sp. PAMC 28760 3
species Shigella sp. PIB 3
species Shigella sp. SHS-1 3
species Shigella sp. SHS-10 3
species Shigella sp. SHS-2 3
species Shigella sp. SHS-3 3
species Shigella sp. SHS-4 3
species Shigella sp. SHS-5 3
species Shigella sp. SHS-6 3
species Shigella sp. SHS-7 3
species Shigella sp. SHS-8 3
species Shigella sp. SHS-9 3
species Shimazuella kribbensis 15 3
species Shimwellia blattae 32 1
species Shinella daejeonensis 2
species Shinella fusca 8
species Shinella granuli 18
species Shinella oryzae 1
species Shinella sp. DR33 3
species Shinella sp. HZN7 61 3
species Shinella sp. PSBB067 1
species Shinella sp. XGS7 1
species Shinella yambaruensis 3
species Shinella zoogloeoides 1
species Shivajiella indica 5
species Shouchella clausii 49 4 54 1 4 2
species Shouchella hunanensis 1
species Shouchella lehensis 5 1 2 2
species Shouchella miscanthi 4
species Shouchella oshimensis 8
species Shouchella rhizosphaerae 1
species Shuttleworthella satelles 1161 2 5 1 1
species Shuttleworthella sp. oral taxon G69 1
species Shuzhengia hominis 4
species Siansivirga jejuensis 1
species Siansivirga zeaxanthinifaciens 4 3 1
species Siccibacter colletis 1
species Sichuan mamastrovirus 10 1
species Sichuan mamastrovirus 12 1
species Sichuan tescho-like virus 1 1
species Siculibacillus lacustris 1
species Sideroxyarcus emersonii 1
species Sideroxydans lithotrophicus 41 1
species Sideroxydans sp. CL21 25
species Silanimonas lenta 23
species Silanimonas mangrovi 15
species Silene noctiflora 2
species Silicimonas algicola 10 2
species Silvibacterium dinghuense 1
species Simiaoa sunii 2 4 3
species Simiduia agarivorans 3 6 1 1
species Simiduia sp. 21SJ11W-1 1
species Siminovitchia fordii 2
species Siminovitchia fortis 1
species Simkania negevensis 15 1 1 1
species Simonsiella muelleri 6 3 1
species Simplicispira psychrophila 2 1
species Simplicispira suum 23 2 1
species Sinanaerobacter chloroacetimidivorans 1
species Singulisphaera acidiphila 2 51 3 2
species Sinibacillus soli 121 2
species Sinimarinibacterium sp. NLF-5-8 85 1 1
species Sinobaca qinghaiensis 4
species Sinobacterium caligoides 137
species Sinomicrobium kalidii 2
species Sinomonas atrocyanea 5 30 1
species Sinomonas cyclohexanicum 1
species Sinomonas soli 4
species Sinomonas sp. R1AF57 32
species Sinorhizobium alkalisoli 12
species Sinorhizobium americanum 10 1
species Sinorhizobium fredii 164 3
species Sinorhizobium medicae 1 23 2
species Sinorhizobium meliloti 90 8 9 1
species Sinorhizobium mexicanum 14
species Sinorhizobium numidicum 1
species Sinorhizobium sojae 13 1
species Sinorhizobium sp. BG8 1
species Sinorhizobium sp. BJ1 1
species Sinorhizobium sp. CCBAU 05631 1
species Sinorhizobium sp. RAC02 22 1
species Sinosporangium album 14
species Sinsheimervirus phiX174 13 22
species Siphonobacter aquaeclarae 30
species Siphoviridae sp. 10
species Siphoviridae sp. ct1yA16 1
species Siphoviridae sp. ct47J5 1
species Siphoviridae sp. ct57T16 1
species Siphoviridae sp. ct5jB2 1
species Siphoviridae sp. ct7FW4 1
species Siphoviridae sp. ct9mC1 1
species Siphoviridae sp. ctamP19 1
species Siphoviridae sp. ctAUQ2 1
species Siphoviridae sp. ctBCI9 1
species Siphoviridae sp. ctBLh2 1
species Siphoviridae sp. ctBxQ4 1
species Siphoviridae sp. ctCCX1 1
species Siphoviridae sp. ctCIv11 1
species Siphoviridae sp. ctCS019 1
species Siphoviridae sp. ctd9R8 1
species Siphoviridae sp. ctDDY10 1
species Siphoviridae sp. ctDiR9 1
species Siphoviridae sp. ctDmQ3 1
species Siphoviridae sp. cteDy1 1
species Siphoviridae sp. ctEgn5 1
species Siphoviridae sp. ctEIp38 1
species Siphoviridae sp. cteNz1 1
species Siphoviridae sp. ctfbh2 1
species Siphoviridae sp. ctfeV1 1
species Siphoviridae sp. ctFxb24 1
species Siphoviridae sp. ctHeV6 1
species Siphoviridae sp. ctjdk2 1
species Siphoviridae sp. ctLKT1 1
species Siphoviridae sp. ctMM521 1
species Siphoviridae sp. ctmYS12 1
species Siphoviridae sp. cto3L1 1
species Siphoviridae sp. ctOiG6 1
species Siphoviridae sp. ctoOf8 1
species Siphoviridae sp. ctoWO12 1
species Siphoviridae sp. ctPAi1 1
species Siphoviridae sp. ctPB44 1
species Siphoviridae sp. ctrfD19 1
species Siphoviridae sp. ctRlj31 1
species Siphoviridae sp. ctRon5 1
species Siphoviridae sp. ctSA812 1
species Siphoviridae sp. ctsoB6 1
species Siphoviridae sp. ctTC45 1
species Siphoviridae sp. ctvuW5 1
species Siphoviridae sp. ctWhl2 1
species Siphoviridae sp. ctXQ92 1
species Siphoviridae sp. ctXX925 1
species Siphoviridae sp. ctXZx16 1
species Siphoviridae sp. ctYKh4 1
species Skermanella aerolata 2064 2 1 1
species Skermanella mucosa 1
species Skermanella parooensis 3
species Skermanella pratensis 63 2
species Skermanella rosea 1
species Skermanella sp. TT6 1
species Slackia equolifaciens 199 26 6 7
species Slackia exigua 62 135 2 1 1
species Slackia faecicanis 1448 268 7 2 1 1 2 1
species Slackia heliotrinireducens 335 269 264 1 2 2
species Slackia isoflavoniconvertens 978 550 4 1 6 1 3 1 2 1
species Slackia piriformis 444 478 65 2 13 3 1 2 7
species Slackia sp. 2
species Slackia sp. NATTS 140
species Slackia sp. S8 F4 23
species Smithella propionica 13
species Sneathia sanguinegens 68 151 6
species Sneathia vaginalis 139 1 2
species Sneathiella aquimaris 1
species Sneathiella chungangensis 1
species Snodgrassella alvi 1 42 1
species Snowella rosea 136
species Sobemovirus sp. 1
species Sodaliphilus pleomorphus 269 1 2 3
species Sodalis endosymbiont of Henestaris halophilus 2
species Sodalis glossinidius 28 14 4 1
species Sodalis ligni 2
species Sodalis praecaptivus 23 2
species Sodiomyces alkalinus 1 1
species Soehngenia saccharolytica 112 1
species Solanum lycopersicum 1 1
species Solibacillus cecembensis 5
species Solibacillus isronensis 2
species Solibacillus silvestris 6 146 1 5 1
species Solibacillus sp. R5-41 8 3 2
species Solibaculum mannosilyticum 2 3 3
species Solidesulfovibrio burkinensis 9
species Solidesulfovibrio carbinolicus 272 143 1 2
species Solidesulfovibrio carbinoliphilus 8 3
species Solidesulfovibrio magneticus 172 1 1
species Solidesulfovibrio marrakechensis 96
species Solimonas aquatica 8
species Solimonas sp. K1W22B-7 71 2 1
species Solirubrobacter pauli 2
species Solirubrobacter soli 25
species Solitalea canadensis 24 66 2 1 2 2
species Solitalea koreensis 8 1
species Solobacterium moorei 751 302 64 1 4 1
species Solobacterium sp. 2
species Solobacterium sp. S4-A19 7
species Sorangium cellulosum 1 217 1 4 2
species Sordaria macrospora 7 2
species Sparassis crispa 1
species Spartinivicinus ruber 1
species Spathaspora passalidarum 1
species Spelaeicoccus albus 4
species Sphaerimonospora mesophila 4
species Sphaerisporangium cinnabarinum 1
species Sphaerisporangium rubeum 3
species Sphaerobacter thermophilus 3 96 2
species Sphaerochaeta associata 2
species Sphaerochaeta globosa 2 163 1 1 2
species Sphaerochaeta pleomorpha 102 1 2
species Sphaerospermopsis kisseleviana 2 1
species Sphaerotilus microaerophilus 1
species Sphaerotilus mobilis 5
species Sphaerotilus natans 2 43 1
species Sphaerotilus sulfidivorans 10 1
species Sphingobacteriaceae bacterium GW460-11-11-14-LB5 12 3
species Sphingobacterium alimentarium 1
species Sphingobacterium arenae 3
species Sphingobacterium bambusae 4094 20 2 3
species Sphingobacterium composti 2 4
species Sphingobacterium daejeonense 46 89 2
species Sphingobacterium faecium 4 1 1
species Sphingobacterium gobiense 10
species Sphingobacterium hotanense 4 122 1 2
species Sphingobacterium kitahiroshimense 43
species Sphingobacterium lactis 104 1
species Sphingobacterium mizutaii 2 60 2
species Sphingobacterium mucilaginosum 4
species Sphingobacterium multivorum 10 11 2
species Sphingobacterium nematocida 1
species Sphingobacterium oryzagri 1 1
species Sphingobacterium paludis 108
species Sphingobacterium psychroaquaticum 4 69 3 2
species Sphingobacterium shayense 4176 4 1 1 7
species Sphingobacterium siyangense 3 1
species Sphingobacterium sp. 21 1 1
species Sphingobacterium sp. B29 1 1
species Sphingobacterium sp. CZ-2 22 1 1
species Sphingobacterium sp. DR205 59 2
species Sphingobacterium sp. E70 2
species Sphingobacterium sp. G1-14 1 1 1
species Sphingobacterium sp. ML3W 58 1 3
species Sphingobacterium sp. PM2-P1-29 44
species Sphingobacterium sp. SRCM116780 2
species Sphingobacterium sp. SYP-B4668 1 2
species Sphingobacterium spiritivorum 5 1 2
species Sphingobacterium thalpophilum 6 2 139 1
species Sphingobacterium thermophilum 6 1
species Sphingobacterium wenxiniae 1
species Sphingobacterium yanglingense 2
species Sphingobacteruim zhuxiongii 33 2
species Sphingobium abikonense 269 18 1 2
species Sphingobium amiense 49 1 16
species Sphingobium baderi 14
species Sphingobium chlorophenolicum 1 10 1
species Sphingobium cloacae 2 23
species Sphingobium cupriresistens 13
species Sphingobium endophyticum 2
species Sphingobium fuliginis 2
species Sphingobium herbicidovorans 7
species Sphingobium hydrophobicum 3
species Sphingobium indicum 7
species Sphingobium olei 6
species Sphingobium phenoxybenzoativorans 1 1
species Sphingobium rhizovicinum 7
species Sphingobium sp. AntQ-1 1
species Sphingobium sp. CAP-1 18 1
species Sphingobium sp. EP60837 12 1
species Sphingobium sp. LB126 1
species Sphingobium sp. LF-16 3
species Sphingobium sp. MI1205 6 1 1
species Sphingobium sp. PAMC28499 7 1 1
species Sphingobium sp. RAC03 19 1
species Sphingobium sp. RSMS 3
species Sphingobium sp. SCG-1 16 3
species Sphingobium sp. SYK-6 15 1
species Sphingobium sp. T51 1
species Sphingobium sp. TKS 22
species Sphingobium sp. YBL2 3 1
species Sphingobium sp. YG1 20 1
species Sphingobium ummariense 1
species Sphingobium xanthum 1
species Sphingobium xenophagum 8 20 19 1
species Sphingobium yanoikuyae 62 16 2 30 1
species Sphingomonas abaci 394 133 1
species Sphingomonas adhaesiva 6
species Sphingomonas aerophila 1
species Sphingomonas aliaeris 1
species Sphingomonas asaccharolytica 11
species Sphingomonas astaxanthinifaciens 1
species Sphingomonas azotifigens 13
species Sphingomonas bisphenolicum 2
species Sphingomonas cannabina 1
species Sphingomonas changbaiensis 3
species Sphingomonas changnyeongensis 17 1
species Sphingomonas cynarae 1
species Sphingomonas daechungensis 1
species Sphingomonas desiccabilis 4
species Sphingomonas dokdonensis 14
species Sphingomonas echinoides 1
species Sphingomonas elodea 22
species Sphingomonas ginsengisoli (ex Hoang et al. 2012) 18
species Sphingomonas ginsengisoli An et al. 2013 16
species Sphingomonas ginsenosidimutans 25
species Sphingomonas guangdongensis 47
species Sphingomonas haloaromaticamans 2
species Sphingomonas hankookensis 1
species Sphingomonas hengshuiensis 18 1
species Sphingomonas humi 1
species Sphingomonas hunanensis 7 1
species Sphingomonas insulae 5 27
species Sphingomonas japonica 12
species Sphingomonas jinjuensis 1
species Sphingomonas koreensis 4 27
species Sphingomonas lacunae 19 1
species Sphingomonas leidyi 33 4
species Sphingomonas lutea 1
species Sphingomonas mali 1
species Sphingomonas melonis 14 35
species Sphingomonas molluscorum 2
species Sphingomonas morindae 2 1
species Sphingomonas mucosissima 2
species Sphingomonas nostoxanthinifaciens 1
species Sphingomonas oligophenolica 38 3
species Sphingomonas paeninsulae 13 1
species Sphingomonas panacis 21 2
species Sphingomonas panacisoli 21 1
species Sphingomonas panni 8
species Sphingomonas parapaucimobilis 2
species Sphingomonas paucimobilis 25 1
species Sphingomonas piscis 22
species Sphingomonas polyaromaticivorans 17
species Sphingomonas profundi 27 1
species Sphingomonas pruni 2
species Sphingomonas psychrotolerans 17 1
species Sphingomonas radiodurans 1
species Sphingomonas roseiflava 73
species Sphingomonas rubra 1
species Sphingomonas sanguinis 4
species Sphingomonas sanxanigenens 3 14 2 2
species Sphingomonas sediminicola 5
species Sphingomonas sinipercae 8 1
species Sphingomonas soli 8 56
species Sphingomonas sp. 5
species Sphingomonas sp. 24T 1
species Sphingomonas sp. 540 2
species Sphingomonas sp. AAP5 29 1
species Sphingomonas sp. AP4-R1 18
species Sphingomonas sp. C8-2 11
species Sphingomonas sp. CCGE4118 1
species Sphingomonas sp. CL5.1 22
species Sphingomonas sp. DS-3PS-11 1
species Sphingomonas sp. ERG5 2
species Sphingomonas sp. FARSPH 25
species Sphingomonas sp. HDW15A 2
species Sphingomonas sp. HJ-JR3 1
species Sphingomonas sp. HMP6 17
species Sphingomonas sp. HMP9 20 1
species Sphingomonas sp. IC081 32
species Sphingomonas sp. JUb134 1
species Sphingomonas sp. KC8 15 1
species Sphingomonas sp. KOPRI 25661 2
species Sphingomonas sp. LK11 35
species Sphingomonas sp. LM7 17 1 2
species Sphingomonas sp. MM-1 12 1
species Sphingomonas sp. MM62(2011) 1
species Sphingomonas sp. NBWT7 1 1
species Sphingomonas sp. NIC1 22 1
species Sphingomonas sp. PAMC26645 29 4 1
species Sphingomonas sp. R1 1
species Sphingomonas sp. RHLT2-11-1 1
species Sphingomonas sp. S2-65 1
species Sphingomonas sp. SH 2
species Sphingomonas sp. Zn3 1
species Sphingomonas suaedae 20
species Sphingomonas taxi 36
species Sphingomonas xanthus 3
species Sphingomonas yabuuchiae 10
species Sphingomonas yunnanensis 23
species Sphingopyxis alaskensis 13 1 1
species Sphingopyxis chilensis 19
species Sphingopyxis fribergensis 8 1
species Sphingopyxis ginsengisoli 2
species Sphingopyxis granuli 2 6 1
species Sphingopyxis macrogoltabida 1 31 2
species Sphingopyxis panaciterrae 1
species Sphingopyxis sp. 113P3 12 1
species Sphingopyxis sp. DBS4 1 1
species Sphingopyxis sp. EG6 9
species Sphingopyxis sp. FD7 10
species Sphingopyxis sp. KW066 1
species Sphingopyxis sp. LC072 1
species Sphingopyxis sp. MG 1 1
species Sphingopyxis sp. OB-3 1
species Sphingopyxis sp. PAMC25046 4 1
species Sphingopyxis sp. QXT-31 9 1
species Sphingopyxis sp. USTB-05 1
species Sphingopyxis sp. YF1 1
species Sphingopyxis taejonensis 10
species Sphingopyxis terrae 5
species Sphingopyxis witflariensis 5 7
species Sphingorhabdus arenilitoris 3
species Sphingorhabdus contaminans 1
species Sphingorhabdus lacus 15
species Sphingorhabdus lutea 1
species Sphingorhabdus sp. Alg231-15 1 1
species Sphingorhabdus sp. M41 4 1
species Sphingorhabdus sp. SMR4y 5 1
species Sphingorhabdus sp. YGSMI21 1 1
species Sphingosinicella microcystinivorans 15 3 1
species Sphingosinicella soli 1
species Sphingosinicella sp. BN140058 20 1
species Sphingosinithalassobacter sp. CS137 1
species Sphingosinithalassobacter tenebrarum 11
species Spinacia oleracea 1
species Spiractinospora alimapuensis 2
species Spiribacter curvatus 2 1
species Spiribacter halobius 2
species Spiribacter roseus 9
species Spiribacter salinus 25 7 2 1 1 1
species Spiribacter sp. 2438 9
species Spirilliplanes yamanashiensis 2
species Spirillum volutans 2 5
species Spirochaeta africana 1 67 1 2
species Spirochaeta cellobiosiphila 1
species Spirochaeta dissipatitropha 1
species Spirochaeta halophila 2 1
species Spirochaeta lutea 13
species Spirochaeta psychrophila 8
species Spirochaeta thermophila 23 100 2
species Spirometra erinaceieuropaei 2
species Spiroplasma alleghenense 12 1
species Spiroplasma apis 1 1 3
species Spiroplasma cantharicola 1 2
species Spiroplasma chinense 6 1
species Spiroplasma chrysopicola 1 2 1
species Spiroplasma clarkii 3 1
species Spiroplasma corruscae 2 1 1
species Spiroplasma culicicola 2 1 1
species Spiroplasma diminutum 6 2
species Spiroplasma eriocheiris 2
species Spiroplasma floricola 1
species Spiroplasma gladiatoris 4 1
species Spiroplasma helicoides 1
species Spiroplasma ixodetis 207
species Spiroplasma kunkelii 1
species Spiroplasma lampyridicola 175 1
species Spiroplasma leptinotarsae 9
species Spiroplasma litorale 2
species Spiroplasma monobiae 1
species Spiroplasma phoeniceum 1
species Spiroplasma platyhelix 207
species Spiroplasma sabaudiense 1 3
species Spiroplasma sp. TIUS-1 3 1
species Spiroplasma syrphidicola 1 1
species Spiroplasma tabanidicola 6 1 1
species Spiroplasma taiwanense 12 5 1
species Spiroplasma turonicum 5 1
species Spirosoma aerolatum 24 2 1
species Spirosoma arcticum 2
species Spirosoma aureum 29 1 2
species Spirosoma endbachense 8
species Spirosoma foliorum 2
species Spirosoma linguale 1 37
species Spirosoma montaniterrae 19 2
species Spirosoma oryzae 2
species Spirosoma oryzicola 2
species Spirosoma panaciterrae 2
species Spirosoma pollinicola 19 1 2
species Spirosoma radiotolerans 23 1
species Spirosoma rhododendri 152 1 1
species Spirosoma rigui 53 1
species Spirosoma sp. KCTC 42546 16 1 2
species Spirosoma sp. KUDC1026 118 2
species Spirosoma taeanense 93 1
species Spirosomataceae bacterium TFI 002 6 3
species Spirulina major 9
species Spongiibacter nanhainus 2
species Spongiibacter sp. IMCC21906 1 1
species Spongiibacter taiwanensis 1
species Spongiimonas flava 1
species Spongiispira norvegica 1
species Spongitalea numazuensis 2
species Sporacetigenium mesophilum 164 2
species Sporanaerobacter acetigenes 3 15 3 1
species Sporichthya polymorpha 7
species Sporisorium graminicola 1 8 1
species Sporisorium reilianum 1
species Sporisorium scitamineum 1
species Sporobacter sp. 1
species Sporobacter termitidis 1427 21 3 9 6 4
species Sporobacterium olearium 968 2 8 7
species Sporobacterium sp. WAL 1855D 1 6
species Sporobolomyces roseus 1
species Sporocytophaga myxococcoides 7 1
species Sporofaciens musculi 1
species Sporohalobacter lortetii 53
species Sporolactobacillus laevus 1
species Sporolactobacillus nakayamae 2
species Sporolactobacillus putidus 1544 1 1 1
species Sporolactobacillus spathodeae 7
species Sporolactobacillus terrae 1 141 2
species Sporolactobacillus vineae 1
species Sporomusa acidovorans 173 1
species Sporomusa aerivorans 1
species Sporomusa intestinalis 1 3
species Sporomusa malonica 203
species Sporomusa ovata 8 3
species Sporomusa paucivorans 22
species Sporomusa silvacetica 39
species Sporomusa termitida 40 202 1 1 2
species Sporosalibacterium faouarense 120 2 1
species Sporosarcina contaminans 6
species Sporosarcina luteola 4
species Sporosarcina pasteurii 746 124 22 1 2
species Sporosarcina psychrophila 28 1
species Sporosarcina siberiensis 23
species Sporosarcina soli 2
species Sporosarcina sp. Eur1 9.10 5
species Sporosarcina sp. Marseille-Q4063 2
species Sporosarcina sp. P33 1 1
species Sporosarcina sp. PTS2304 5 1 2
species Sporosarcina sp. resist 1
species Sporosarcina sp. Te-1 2
species Sporosarcina thermotolerans 1269 2
species Sporosarcina ureae 1 5 224 1 1 2
species Sporosarcina ureilytica 4 1
species Sporothrix schenckii 3
species Sporotomaculum hydroxybenzoicum 163 268
species Sporotomaculum syntrophicum 2093 10 7
species Stackebrandtia endophytica 1
species Stackebrandtia nassauensis 156 47 1 1
species Stagonosporopsis rhizophila 1
species Stanieria cyanosphaera 5 1
species Stanieria sp. NIES-3757 1 1
species Staphylococcus agnetis 38 4 1 1
species Staphylococcus argenteus 1
species Staphylococcus arlettae 2 14 2 1
species Staphylococcus aureus 329 15 7 272 2 2 4 2 2 1
species Staphylococcus auricularis 6 15 23 2
species Staphylococcus capitis 1 128 1 3 2
species Staphylococcus caprae 10 65 1 1
species Staphylococcus carnosus 12 4 28 2
species Staphylococcus chromogenes 67 42 24 1
species Staphylococcus coagulans 1
species Staphylococcus cohnii 92
species Staphylococcus condimenti 17 1 1
species Staphylococcus debuckii 9 1
species Staphylococcus delphini 5 1 1
species Staphylococcus devriesei 23 36
species Staphylococcus edaphicus 1 2
species Staphylococcus epidermidis 33 4 253 1 4 2 1
species Staphylococcus equorum 35 1 6 2
species Staphylococcus felis 11 1
species Staphylococcus gallinarum 26 1
species Staphylococcus haemolyticus 125 75 166 4 2 3
species Staphylococcus hominis 5 4 1 175 1 1 1 2
species Staphylococcus hyicus 7 2 2
species Staphylococcus intermedius 60
species Staphylococcus kloosii 20 14
species Staphylococcus lloydii 1
species Staphylococcus lugdunensis 4 134 1
species Staphylococcus lutrae 5 2
species Staphylococcus massiliensis 23 2
species Staphylococcus muscae 4 1
species Staphylococcus nepalensis 35 1
species Staphylococcus pasteuri 1 47 2 2
species Staphylococcus pettenkoferi 7 16
species Staphylococcus phage IME-SA4 5
species Staphylococcus phage Quidividi 1
species Staphylococcus phage StB12 3
species Staphylococcus phage StB20-like 2
species Staphylococcus phage StB27 2
species Staphylococcus phage Terranova 3
species Staphylococcus phage Twillingate 1
species Staphylococcus piscifermentans 5 7 1 4 1
species Staphylococcus pseudintermedius 3 185 1 3
species Staphylococcus pseudolugdunensis 346 1
species Staphylococcus ratti 1
species Staphylococcus saccharolyticus 1
species Staphylococcus saprophyticus 4 88 2 2 2
species Staphylococcus schleiferi 4 3 17 1 1
species Staphylococcus schweitzeri 4
species Staphylococcus simiae 24 2
species Staphylococcus simulans 4 76 1 1 2
species Staphylococcus sp. 1
species Staphylococcus sp. 17KM0847 11 1
species Staphylococcus sp. 3348O2 151
species Staphylococcus sp. 3356O2 1
species Staphylococcus sp. AntiMn-1 1 1
species Staphylococcus sp. C9I2 1 15
species Staphylococcus sp. CAG:324 1
species Staphylococcus sp. CDC25 2
species Staphylococcus sp. CDC3 1
species Staphylococcus sp. IVB6240 1
species Staphylococcus sp. L10 1
species Staphylococcus sp. M0911 5 1
species Staphylococcus sp. MI 10-1553 2 1
species Staphylococcus sp. N169 11
species Staphylococcus sp. NRL 22/194 1 1
species Staphylococcus sp. WB18-16 1
species Staphylococcus succinus 29 17 1
species Staphylococcus warneri 4 44
species Staphylococcus xylosus 47 1 1
species Staphylospora marina 151 2 2
species Staphylothermus marinus 1
species Stappia indica 31 1
species Stappia sp. ES.058 9 1
species Starkeya sp. ORNL1 45 1
species Starria zimbabweensis 112 3
species Stella humosa 101 47 1 2
species Stella sp. ATCC 35155 28
species Stella vacuolata 199 41
species Stenotrophomonas acidaminiphila 1 19 1
species Stenotrophomonas chelatiphaga 11 17
species Stenotrophomonas geniculata 31
species Stenotrophomonas humi 1
species Stenotrophomonas maltophilia 16 19 245 2 2 1
species Stenotrophomonas nitritireducens 1
species Stenotrophomonas pavanii 40
species Stenotrophomonas rhizophila 14 58 2 1
species Stenotrophomonas sp. 169 1
species Stenotrophomonas sp. 364 3
species Stenotrophomonas sp. C-S-TSA3 1 5
species Stenotrophomonas sp. ESTM1D_MKCIP4_1 1
species Stenotrophomonas sp. G4 4
species Stenotrophomonas sp. I_63-LFP1A9B1 2
species Stenotrophomonas sp. I_71-LFP2B10A 5
species Stenotrophomonas sp. LM091 11 1
species Stenotrophomonas sp. N017 1
species Stenotrophomonas sp. PAMC25021 1 1
species Stenotrophomonas sp. Pemsol 1
species Stenotrophomonas sp. TEPEL 1
species Stenotrophomonas sp. TV49May 1
species Stenotrophomonas sp. UYSO33 2
species Stenotrophomonas sp. ZAC14D2_NAIMI4_6 1
species Stenotrophomonas terrae 9 1
species Stenoxybacter acetivorans 1
species Stereum hirsutum 2 1
species Steroidobacter denitrificans 25 39 62 2
species Sterolibacterium denitrificans 12 15 22
species Stieleria neptunia 3
species Stigmatella aurantiaca 81 1 2
species Stomatobaculum longum 700 3 2 3 4 1
species Storeatula sp. CCMP1868 1
species Stratiformator vulcanicus 1
species Strawberry lethal yellows phytoplasma 3
species Streptacidiphilus griseus 161
species Streptacidiphilus jiangxiensis 1
species Streptacidiphilus sp. P02-A3a 27 2 1
species Streptacidiphilus sp. PB12-B1b 5 2
species Streptantibioticus cattleyicolor 4 2
species Streptantibioticus rubrisoli 2
species Streptobacillus moniliformis 5 121 1 3 2 1
species Streptococcaceae bacterium 2
species Streptococcus acidominimus 233 1 2
species Streptococcus agalactiae 168 138 41 270 1 7 2 1 2
species Streptococcus alactolyticus 68 1 1 2 2
species Streptococcus anginosus 794 484 10 262 2 2 6 6 7 1 2
species Streptococcus australis 3287 78 40 261 2 11 1 6 1 2
species Streptococcus azizii 1
species Streptococcus caballi 11
species Streptococcus canis 50 2 260 1 1 2
species Streptococcus castoreus 35
species Streptococcus chenjunshii 102 1 2
species Streptococcus constellatus 9 456 184 2 2
species Streptococcus criceti 1
species Streptococcus cristatus 879 2 1 253 1 1 2 1 1 2
species Streptococcus cuniculipharyngis 58
species Streptococcus danieliae 390
species Streptococcus dentapri 57 383 1
species Streptococcus dentasini 367
species Streptococcus dentirousetti 123 1
species Streptococcus devriesei 8
species Streptococcus didelphis 119 597 2
species Streptococcus downei 53
species Streptococcus dysgalactiae 37 47 22 231 1 1 1 1 1 1 2 1
species Streptococcus entericus 83
species Streptococcus equi 4 41 252 1 1 2 2 2
species Streptococcus equinus 1979 5 2 266 10 1 1 23 9 1 4 3 2
species Streptococcus ferus 7 18 54 2 2
species Streptococcus fryi 2569 4 1 3
species Streptococcus gallinaceus 168 1
species Streptococcus gallolyticus 16 3 136 1 1 1 1 2
species Streptococcus gordonii 479 1 89 266 3 1 2 1 2
species Streptococcus gwangjuense 224 2
species Streptococcus halichoeri 64 1 2
species Streptococcus halotolerans 57 1 2
species Streptococcus henryi 2
species Streptococcus himalayensis 62 2
species Streptococcus hongkongensis 2
species Streptococcus hyointestinalis 19 137 2
species Streptococcus hyovaginalis 180
species Streptococcus ictaluri 35
species Streptococcus ilei 237 1 1 2
species Streptococcus infantarius 235 1 84 1 2 1 1 1
species Streptococcus infantis 1454 38 5 1 4 2 1 2 1
species Streptococcus iniae 8 61 2
species Streptococcus intermedius 514 181 240 9 3 21 1 2 2
species Streptococcus koreensis 224 1 2 2 2
species Streptococcus lactarius 11 1 5 2
species Streptococcus lutetiensis 73 246 1 1 2 2
species Streptococcus macacae 4 22
species Streptococcus macedonicus 60 50 1 1 1
species Streptococcus marimammalium 46 468
species Streptococcus marmotae 64 1 2
species Streptococcus massiliensis 741 75 2
species Streptococcus merionis 20 62 2
species Streptococcus milleri 1240 1 188 2 3 2 2
species Streptococcus minor 2 22 1
species Streptococcus mitis 1 271 1 11 1 2 1
species Streptococcus mutans 467 197 105 209 3 2 3 2 2 4 2
species Streptococcus oralis 2519 1 4 268 5 1 1 3 1 7 2 1
species Streptococcus orisasini 115
species Streptococcus oriscaviae 1 1
species Streptococcus orisratti 80 318
species Streptococcus orisuis 8
species Streptococcus panodentis 1
species Streptococcus pantholopis 33 3 2
species Streptococcus parasanguinis 2711 10 468 268 3 2 21 2 9 3 5 3 2 2
species Streptococcus parasuis 2
species Streptococcus parauberis 17 85 1 87 1 3 2 1
species Streptococcus pasteuri 46
species Streptococcus pasteurianus 34 273 1 1 2 3
species Streptococcus periodonticum 113 1 2
species Streptococcus peroris 18 2 51 3 1 2
species Streptococcus phage 33888 2
species Streptococcus phage EJ-1 2 1
species Streptococcus phage IPP15 3
species Streptococcus phage IPP23 3
species Streptococcus phage IPP61 1
species Streptococcus phage Javan100 2
species Streptococcus phage Javan11 5
species Streptococcus phage Javan110 3
species Streptococcus phage Javan115 3
species Streptococcus phage Javan191 14
species Streptococcus phage Javan199 1
species Streptococcus phage Javan202 1
species Streptococcus phage Javan213 1
species Streptococcus phage Javan226 2
species Streptococcus phage Javan231 1
species Streptococcus phage Javan241 3
species Streptococcus phage Javan244 10
species Streptococcus phage Javan246 3
species Streptococcus phage Javan247 1
species Streptococcus phage Javan268 2
species Streptococcus phage Javan269 4
species Streptococcus phage Javan270 7
species Streptococcus phage Javan310 2
species Streptococcus phage Javan311 1
species Streptococcus phage Javan316 2
species Streptococcus phage Javan320 1
species Streptococcus phage Javan326 5
species Streptococcus phage Javan331 7
species Streptococcus phage Javan336 1
species Streptococcus phage Javan340 1
species Streptococcus phage Javan345 1
species Streptococcus phage Javan346 5
species Streptococcus phage Javan347 3
species Streptococcus phage Javan348 5
species Streptococcus phage Javan351 1
species Streptococcus phage Javan355 4
species Streptococcus phage Javan363 1
species Streptococcus phage Javan366 4
species Streptococcus phage Javan370 4
species Streptococcus phage Javan371 6
species Streptococcus phage Javan372 18 1
species Streptococcus phage Javan374 5
species Streptococcus phage Javan405 1
species Streptococcus phage Javan414 1
species Streptococcus phage Javan422 4
species Streptococcus phage Javan575 10
species Streptococcus phage Javan59 4
species Streptococcus phage Javan64 16
species Streptococcus phage Javan68 16
species Streptococcus phage Javan69 10
species Streptococcus phage PH10 7
species Streptococcus phage phi29854 3
species Streptococcus phage phiARI0131-2 2
species Streptococcus phage phiJH1301-2 1
species Streptococcus phage phi-SC181 3 1
species Streptococcus phage phi-SsUD.1 1
species Streptococcus phage phi-SsuSSJ28_rum 1
species Streptococcus phage phi-SsuYTJ2_rum 1
species Streptococcus phage SM1 2 1
species Streptococcus phage SpSL1 1
species Streptococcus phage SW30 1
species Streptococcus phage YMC-2011 35
species Streptococcus phocae 384 115
species Streptococcus pluranimalium 145 2 111 1 2
species Streptococcus plurextorum 172 124
species Streptococcus pneumoniae 17 81 270 1 4 5 4 2 1
species Streptococcus porcinus 155 1 2
species Streptococcus porcorum 203
species Streptococcus pseudopneumoniae 2219 1 207 2 1 1 6 2
species Streptococcus pseudoporcinus 4 15 1 231 2
species Streptococcus pyogenes 14 63 5 272 2 4 2
species Streptococcus ratti 2
species Streptococcus respiraculi 115 1 2
species Streptococcus rubneri 1 1 5 1 1
species Streptococcus ruminantium 18 2
species Streptococcus ruminicola 5 1 2
species Streptococcus rupicaprae 33
species Streptococcus salivarius 25 14 276 12 20 26 29 14 9 4 3 1
species Streptococcus sanguinis 896 499 1 269 12 2 6 28 2 4 4 3
species Streptococcus satellite phage Javan287 1
species Streptococcus satellite phage Javan314 2
species Streptococcus satellite phage Javan364 2
species Streptococcus satellite phage Javan365 6
species Streptococcus satellite phage Javan376 1
species Streptococcus satellite phage Javan379 4
species Streptococcus satellite phage Javan416 1
species Streptococcus satellite phage Javan431 1
species Streptococcus satellite phage Javan537 20
species Streptococcus satellite phage Javan538 15
species Streptococcus satellite phage Javan540 15
species Streptococcus satellite phage Javan600 4
species Streptococcus satellite phage Javan614 1
species Streptococcus satellite phage Javan615 2
species Streptococcus satellite phage Javan651 6
species Streptococcus satellite phage Javan652 11
species Streptococcus satellite phage Javan653 6
species Streptococcus satellite phage Javan70 5
species Streptococcus seminale 1
species Streptococcus sinensis 1 1
species Streptococcus sobrinus 1 13 100 1 1 2 2 2
species Streptococcus sp. 3
species Streptococcus sp. 10.1 3
species Streptococcus sp. 116-D4 227 1
species Streptococcus sp. 1171_SSPC 1
species Streptococcus sp. 11aTha1 294
species Streptococcus sp. 15.1 3
species Streptococcus sp. 16.1 3
species Streptococcus sp. 1643 145 2
species Streptococcus sp. 17.1 3
species Streptococcus sp. 2.1 3
species Streptococcus sp. 2011_Ileo_MS_A10 18
species Streptococcus sp. 2011_Ileo_MS_A12 2
species Streptococcus sp. 2011_Ileo_MS_C3 1
species Streptococcus sp. 2011_Oral_MS_A3 596
species Streptococcus sp. 2011_Oral_MS_B3 1
species Streptococcus sp. 2011_Oral_MS_D12 1
species Streptococcus sp. 2011_Oral_MS_E1 2
species Streptococcus sp. 21.1 3
species Streptococcus sp. 22.1 3
species Streptococcus sp. 23.2 3
species Streptococcus sp. 263_SSPC 1 1
species Streptococcus sp. 3.1 3
species Streptococcus sp. 3244O2 35
species Streptococcus sp. 400_SSPC 1
species Streptococcus sp. 449_SSPC 4
species Streptococcus sp. 596553 1
species Streptococcus sp. 9.1 4
species Streptococcus sp. A12 261 1 2 1 2
species Streptococcus sp. ACS2 12 3
species Streptococcus sp. BS35a 43
species Streptococcus sp. C150 12
species Streptococcus sp. CCH5-D3 3
species Streptococcus sp. CCH8-H5 1 3
species Streptococcus sp. CF9-1 1
species Streptococcus sp. CF9-3 1
species Streptococcus sp. ChDC B363 1
species Streptococcus sp. DAT741 43 1
species Streptococcus sp. DFI.7.26 1
species Streptococcus sp. F0441 1
species Streptococcus sp. F0442 3 1
species Streptococcus sp. FDAARGOS_192 2 4 2
species Streptococcus sp. GMD6S 30
species Streptococcus sp. 'group B' 4
species Streptococcus sp. GS001 1
species Streptococcus sp. HF-100 1
species Streptococcus sp. HF-2466 1
species Streptococcus sp. HMSC034A12 1
species Streptococcus sp. HMSC034B03 1
species Streptococcus sp. HMSC034B04 1
species Streptococcus sp. HMSC034E12 1
species Streptococcus sp. HMSC034F02 1
species Streptococcus sp. HMSC034F03 1
species Streptococcus sp. HMSC056D07 1
species Streptococcus sp. HMSC064D12 4 4
species Streptococcus sp. HMSC064H09 1 3
species Streptococcus sp. HMSC065H07 3
species Streptococcus sp. HMSC066F10 1
species Streptococcus sp. HMSC068F04 4
species Streptococcus sp. HMSC071H03 1
species Streptococcus sp. HMSC072D03 2 4
species Streptococcus sp. HMSC073A12 1
species Streptococcus sp. HMSC073D05 1 1
species Streptococcus sp. HMSC078H03 4
species Streptococcus sp. HMSC078H12 4
species Streptococcus sp. HMSC10E12 4
species Streptococcus sp. HN38 1 1
species Streptococcus sp. HPH0090 1
species Streptococcus sp. HSISB1 1 1
species Streptococcus sp. HSISM1 3
species Streptococcus sp. HSISS1 1 1 4
species Streptococcus sp. HSISS2 1
species Streptococcus sp. KS 6 1 2
species Streptococcus sp. LPB0220 258 2 2
species Streptococcus sp. LQJ-218 1
species Streptococcus sp. M8_11_2TCO2 1
species Streptococcus sp. Marseille-Q3533 1 1 2
species Streptococcus sp. Marseille-Q3604 3
species Streptococcus sp. Marseille-Q6470 1 2
species Streptococcus sp. MSK15_114 4
species Streptococcus sp. NCTC 11567 112
species Streptococcus sp. NPS 308 176 1 1
species Streptococcus sp. oral taxon 061 257 1 2 1
species Streptococcus sp. oral taxon 064 125 1
species Streptococcus sp. oral taxon 431 256 2 1 2
species Streptococcus sp. oral taxon G59 3 128
species Streptococcus sp. oral taxon G63 2
species Streptococcus sp. PSH2 1
species Streptococcus sp. S16-08 1
species Streptococcus sp. S16-11 154
species Streptococcus sp. SR4 3 4
species Streptococcus sp. TM013 1
species Streptococcus sp. VT 162 162
species Streptococcus sp. ZB199 2
species Streptococcus sp. zg-86 2
species Streptococcus suis 18 85 270 1 8 6 1 3 1
species Streptococcus thermophilus 3697 14 236 275 12 10 15 24 1 8 2 6 3 3 1 1
species Streptococcus thoraltensis 16 34 1
species Streptococcus timonensis 3 1 1
species Streptococcus toyakuensis 2
species Streptococcus troglodytae 232 29 44 1
species Streptococcus troglodytidis 339
species Streptococcus uberis 586 107 1 2 2
species Streptococcus urinalis 34 18 108 2 2
species Streptococcus ursoris 137
species Streptococcus vaginalis 5 1
species Streptococcus vestibularis 3850 2 236 6 11 1 6 3 3
species Streptococcus viridans 1 4 1 1
species Streptococcus xiaochunlingii 4 1
species Streptohalobacillus salinus 9
species Streptomonospora alba 442 2
species Streptomonospora litoralis 36 1
species Streptomonospora nanhaiensis 1
species Streptomyces actuosus 3 1
species Streptomyces aculeolatus 1
species Streptomyces albidoflavus 1 1
species Streptomyces albireticuli 1 1 1 1
species Streptomyces alboflavus 2
species Streptomyces alboniger 1
species Streptomyces albovinaceus 8
species Streptomyces albus 38 2 1
species Streptomyces alfalfae 1
species Streptomyces alkaliphilus 4
species Streptomyces alkalithermotolerans 3
species Streptomyces ambofaciens 1
species Streptomyces angustmyceticus 1
species Streptomyces antimycoticus 2
species Streptomyces aquilus 3 1 1
species Streptomyces araujoniae 2
species Streptomyces argyrophyllae 1
species Streptomyces armeniacus 3 4
species Streptomyces asoensis 1 1
species Streptomyces atratus 8
species Streptomyces atroolivaceus 1
species Streptomyces aurantiacus 2
species Streptomyces auratus 27 1
species Streptomyces aureoverticillatus 4
species Streptomyces axinellae 4
species Streptomyces bathyalis 1
species Streptomyces bingchenggensis 13 1
species Streptomyces broussonetiae 2
species Streptomyces buecherae 3 2 1
species Streptomyces cacaoi 6 2
species Streptomyces cadmiisoli 7 1 1
species Streptomyces californicus 1
species Streptomyces calvus 1
species Streptomyces capitiformicae 6
species Streptomyces castelarensis 44
species Streptomyces celluloflavus 6
species Streptomyces chartreusis 12 3 1
species Streptomyces chumphonensis 1
species Streptomyces clavifer 1
species Streptomyces clavuligerus 9 2
species Streptomyces coelicolor 2
species Streptomyces coeruleorubidus 1 1 1
species Streptomyces collinus 2 1
species Streptomyces coriofaciens 87
species Streptomyces cyaneochromogenes 2 1
species Streptomyces cyanogenus 1
species Streptomyces danangensis 9 1
species Streptomyces dangxiongensis 1
species Streptomyces davaonensis 1 1
species Streptomyces deccanensis 1
species Streptomyces decoyicus 1
species Streptomyces dengpaensis 4
species Streptomyces drozdowiczii 1
species Streptomyces durmitorensis 1
species Streptomyces espinosus 1
species Streptomyces exfoliatus 1 1
species Streptomyces fagopyri 3
species Streptomyces ferrugineus 1
species Streptomyces ficellus 3
species Streptomyces filamentosus 4 1
species Streptomyces formicae 2 2 1
species Streptomyces fulvissimus 1
species Streptomyces fungicidicus 1
species Streptomyces galilaeus 2
species Streptomyces genisteinicus 1
species Streptomyces gilvosporeus 7 1
species Streptomyces glaucescens 3 2
species Streptomyces globisporus 1
species Streptomyces globosus 2 2
species Streptomyces glycovorans 1
species Streptomyces goraiensis 7
species Streptomyces griseochromogenes 1 1
species Streptomyces griseofuscus 1
species Streptomyces griseorubiginosus 3 1
species Streptomyces griseoviridis 1
species Streptomyces griseus 42 60 1 1
species Streptomyces hainanensis 1
species Streptomyces harbinensis 15 1
species Streptomyces himalayensis 1
species Streptomyces hiroshimensis 3
species Streptomyces humidus 1
species Streptomyces hundungensis 3
species Streptomyces hygroscopicus 1 1
species Streptomyces incarnatus 1
species Streptomyces iranensis 2
species Streptomyces jietaisiensis 1 3
species Streptomyces kaempferi 14
species Streptomyces kanamyceticus 1 1
species Streptomyces katrae 3 2
species Streptomyces koelreuteriae 1
species Streptomyces koyangensis 1
species Streptomyces laurentii 1
species Streptomyces lavendulae 1 1 2
species Streptomyces lazureus 72 2
species Streptomyces leeuwenhoekii 1
species Streptomyces liangshanensis 9
species Streptomyces lienomycini 1
species Streptomyces liliiviolaceus 1
species Streptomyces lincolnensis 3
species Streptomyces lonarensis 1
species Streptomyces longhuiensis 2
species Streptomyces lunaelactis 5 1
species Streptomyces luridiscabiei 2 4
species Streptomyces lusitanus 1
species Streptomyces luteoverticillatus 2 1 2
species Streptomyces lydicus 9
species Streptomyces marincola 2 2
species Streptomyces mexicanus 1
species Streptomyces microflavus 1
species Streptomyces nanchangensis 6
species Streptomyces narbonensis 1
species Streptomyces neyagawaensis 7
species Streptomyces nigra 1
species Streptomyces niveus 1 4
species Streptomyces nodosus 7
species Streptomyces noursei 3 2
species Streptomyces olivogriseus 18
species Streptomyces olivoreticuli 1 4 1
species Streptomyces omiyaensis 2
species Streptomyces pactum 2 1
species Streptomyces paludis 4 2
species Streptomyces panacagri 1
species Streptomyces parvulus 1
species Streptomyces peucetius 3 1 2
species Streptomyces phaeogriseichromatogenes 3
species Streptomyces phaeolivaceus 4 1
species Streptomyces pharetrae 1
species Streptomyces pilosus 1
species Streptomyces platensis 39 1
species Streptomyces pluripotens 7
species Streptomyces polyrhachis 1
species Streptomyces prasinus 1
species Streptomyces pratensis 1
species Streptomyces pristinaespiralis 1 3
species Streptomyces profundus 1
species Streptomyces qaidamensis 1
species Streptomyces qinzhouensis 3
species Streptomyces radiopugnans 9
species Streptomyces rapamycinicus 1 1
species Streptomyces rectiverticillatus 3 1
species Streptomyces resistomycificus 1
species Streptomyces reticuli 1
species Streptomyces reticuliscabiei 3
species Streptomyces rimosus 1 14
species Streptomyces rochei 1
species Streptomyces roseochromogenus 1
species Streptomyces roseogilvus 100
species Streptomyces roseoviolascens 1
species Streptomyces ruber 1
species Streptomyces rubrolavendulae 1
species Streptomyces scabiei 2 3
species Streptomyces seoulensis 5 1
species Streptomyces sp. 1
species Streptomyces sp. 11-1-2 1
species Streptomyces sp. 2114.2 1
species Streptomyces sp. 2323.1 1 3
species Streptomyces sp. 3214.6 3 3
species Streptomyces sp. 4F 1
species Streptomyces sp. A144 1
species Streptomyces sp. ADI95-16 2
species Streptomyces sp. AgN23 200
species Streptomyces sp. AMCC400023 1
species Streptomyces sp. BHT-5-2 1
species Streptomyces sp. BK340 1
species Streptomyces sp. C8S0 3
species Streptomyces sp. CA-210063 1
species Streptomyces sp. CB00271 1
species Streptomyces sp. CB01881 3
species Streptomyces sp. CB02460 1
species Streptomyces sp. CB09001 3
species Streptomyces sp. CC0208 3 1
species Streptomyces sp. CCM_MD2014 1
species Streptomyces sp. CdTB01 3 1
species Streptomyces sp. CFMR 7 3 1
species Streptomyces sp. CLI2509 4 1
species Streptomyces sp. CMB-StM0423 2
species Streptomyces sp. CNQ-509 1 2
species Streptomyces sp. DUT11 1
species Streptomyces sp. endophyte_N2 1
species Streptomyces sp. ETH9427 1
species Streptomyces sp. fd1-xmd 2 1
species Streptomyces sp. FR1 1
species Streptomyces sp. FXJ1.172 1
species Streptomyces sp. Go-475 1 2
species Streptomyces sp. GQFP 1
species Streptomyces sp. GS7 1 2
species Streptomyces sp. HM190 1
species Streptomyces sp. HSG2 1
species Streptomyces sp. ICC1 15
species Streptomyces sp. ICC4 12
species Streptomyces sp. JB150 2
species Streptomyces sp. L-9-10 1
species Streptomyces sp. LBUM 1480 1
species Streptomyces sp. LRE541 1
species Streptomyces sp. M2 2 1
species Streptomyces sp. M54 1
species Streptomyces sp. MBT27 1 1
species Streptomyces sp. MRC013 2
species Streptomyces sp. MST-110588 1
species Streptomyces sp. NA02950 8 1
species Streptomyces sp. NA04227 3 2
species Streptomyces sp. NEAU-S7GS2 1
species Streptomyces sp. NEAU-sy36 2
species Streptomyces sp. NHF165 8 1
species Streptomyces sp. NRRL B-24484 1
species Streptomyces sp. P3 3 1 1
species Streptomyces sp. Q1 1
species Streptomyces sp. QHH-9511 2 1
species Streptomyces sp. Rer75 1
species Streptomyces sp. RPA4-2 1 1
species Streptomyces sp. RTd22 1 1 1
species Streptomyces sp. S063 1
species Streptomyces sp. S1A1-8 1
species Streptomyces sp. S4.7 1
species Streptomyces sp. S8 1 1
species Streptomyces sp. SAT1 3 1
species Streptomyces sp. SCUT-3 3 2
species Streptomyces sp. SirexAA-E 1
species Streptomyces sp. SM18 1
species Streptomyces sp. SN-593 2
species Streptomyces sp. So13.3 1
species Streptomyces sp. SS52 1
species Streptomyces sp. SUK 48 1
species Streptomyces sp. TLI_053 1
species Streptomyces sp. TN58 1
species Streptomyces sp. Tu 2975 1
species Streptomyces sp. Tu6071 1
species Streptomyces sp. Tue 6075 1 1
species Streptomyces sp. Tue6028 1
species Streptomyces sp. W1SF4 3 1
species Streptomyces sp. WAC 01438 1 1 1
species Streptomyces sp. WAC 01529 1 1
species Streptomyces sp. WAC 06738 1
species Streptomyces sp. WAC00288 4
species Streptomyces sp. YIM 121038 1
species Streptomyces sp. Z423-1 2 2
species Streptomyces spectabilis 3
species Streptomyces spongiicola 1 1
species Streptomyces stelliscabiei 2
species Streptomyces subrutilus 8
species Streptomyces synnematoformans 2 1
species Streptomyces tacrolimicus 6 20
species Streptomyces tanashiensis 1
species Streptomyces thermoatroviridis 1
species Streptomyces thermocarboxydus 3
species Streptomyces thermoluteus 1
species Streptomyces thermovulgaris 4
species Streptomyces tirandamycinicus 1
species Streptomyces tsukubensis 21 1
species Streptomyces tubbatahanensis 1
species Streptomyces venezuelae 91 2
species Streptomyces vietnamensis 3
species Streptomyces vinaceus 2 1
species Streptomyces violaceoruber 2
species Streptomyces violaceusniger 3
species Streptomyces violens 3
species Streptomyces viridosporus 1
species Streptomyces xanthii 1
species Streptomyces xanthophaeus 1
species Streptomyces xiamenensis 9
species Streptomyces xinghaiensis 22 1
species Streptomyces yatensis 1
species Streptomyces yerevanensis 11 1
species Streptomyces zinciresistens 2
species Streptosporangium jomthongense 1
species Streptosporangium purpuratum 6 5
species Streptosporangium roseum 55 1 2
species Streptosporangium sp. 'caverna' 31 1
species Streptosporangium subroseum 3
species Streptosporangium yunnanense 1 5
species Strigomonas galati 1
species Strongyloides papillosus 2
species Strongyloides ratti 1
species Strongyloides stercoralis 1
species Strongyloides venezuelensis 1
species Stutzerimonas azotifigens 2 8
species Stutzerimonas balearica 1 15 1 1
species Stutzerimonas chloritidismutans 5
species Stutzerimonas stutzeri 38 35 257 1 4 2
species Stutzerimonas xanthomarina 5 1 8
species Subdoligranulum sp. 4
species Subdoligranulum sp. 4_3_54A2FAA 2 18 4
species Subdoligranulum sp. 60_17 4
species Subdoligranulum sp. AF14-43 1 4
species Subdoligranulum sp. AM16-9 1 4
species Subdoligranulum sp. AM23-21AC 4
species Subdoligranulum sp. APC924/74 3 8 4 1
species Subdoligranulum sp. OF01-18 1 4
species Subdoligranulum sp. TF05-17AC 4
species Subdoligranulum variabile 1502 627 1 3 16 22 2 9 7 4 3 1
species Succinatimonas hippei 73 5 1
species Succiniclasticum ruminis 177 485 2 2 1
species Succinimonas amylolytica 77
species Succinispira mobilis 172 2 4
species Succinivibrio dextrinosolvens 1157 125 192 9 19 2
species Succinivibrionaceae bacterium UCG-001 3
species Sugiyamaella lignohabitans 8 1
species Suicoccus acidiformans 111 2 2
species Suillus discolor 1
species Suillus paluster 1 1
species Sukhumvitvirus T25 1
species Sulfidibacter corallicola 1
species Sulfitobacter alexandrii 25 1 1
species Sulfitobacter mediterraneus 3
species Sulfitobacter pontiacus 1
species Sulfitobacter sp. BSw21498 1
species Sulfitobacter sp. D7 6 1
species Sulfitobacter sp. DFL-14 1
species Sulfitobacter sp. JL08 6 3 1
species Sulfitobacter sp. SK011 1 1 1
species Sulfitobacter sp. SK012 1 1
species Sulfitobacter sp. THAF37 10
species Sulfobacillus acidophilus 127 1 3
species Sulfobacillus benefaciens 4
species Sulfobacillus thermotolerans 19
species Sulfodiicoccus acidiphilus 2
species Sulfolobus islandicus 2
species Sulfolobus sp. A20 1
species Sulfuricaulis limicola 70 2 1
species Sulfuricella denitrificans 25 1 1
species Sulfuricurvum kujiense 6 9 3 4
species Sulfuricystis multivorans 32 1
species Sulfuricystis thermophila 51 4
species Sulfuriferula nivalis 1
species Sulfuriferula plumbiphila 54 1 2
species Sulfuriferula sp. AH1 34
species Sulfuriflexus mobilis 30 1
species Sulfurifustis variabilis 6 29 2
species Sulfurihydrogenibium azorense 1 2
species Sulfurihydrogenibium sp. YO3AOP1 7 1 1
species Sulfurimicrobium lacus 72
species Sulfurimonas aquatica 1
species Sulfurimonas autotrophica 1
species Sulfurimonas denitrificans 1 2 1 2
species Sulfurimonas gotlandica 5 1
species Sulfurimonas hydrogeniphila 1
species Sulfurimonas lithotrophica 1
species Sulfurimonas marina 1
species Sulfurimonas paralvinellae 2 1
species Sulfurimonas sp. HSL-3221 2
species Sulfurimonas sp. SWIR-19 1
species Sulfuriroseicoccus oceanibius 2
species Sulfurisoma sediminicola 5
species Sulfuritalea hydrogenivorans 28 1 1
species Sulfuritortus calidifontis 64 1
species Sulfurivermis fontis 137 3 1
species Sulfurivirga caldicuralii 37
species Sulfurospirillum alkalitolerans 2
species Sulfurospirillum arcachonense 1 2
species Sulfurospirillum barnesii 3 1
species Sulfurospirillum cavolei 1 2
species Sulfurospirillum deleyianum 1 2
species Sulfurospirillum diekertiae 1 1
species Sulfurospirillum halorespirans 1
species Sulfurospirillum multivorans 1
species Sulfurospirillum sp. JPD-1 3
species Sulfurospirillum sp. UCH001 2 1
species Sulfurovum aggregans 1
species Sulfurovum lithotrophicum 1 9 2
species Sulfurovum mangrovi 1
species Sulfurovum sp. NBC37-1 13 1
species Sungkyunkwania multivorans 1
species Sunxiuqinia elliptica 30
species Sunxiuqinia rutila 30
species Suspvirus SUSP1 1
species Suspvirus SUSP2 1
species Sutcliffiella cohnii 35
species Sutcliffiella horikoshii 4 30 3 2
species Sutterella faecalis 238 1 2
species Sutterella massiliensis 1
species Sutterella megalosphaeroides 241 1 2 2
species Sutterella parvirubra 779 531 6 1 1
species Sutterella sanguinus 3646 2 7
species Sutterella seckii 1
species Sutterella sp. 2
species Sutterella sp. 252 72 13
species Sutterella sp. 63_29 2
species Sutterella sp. AM11-39 1
species Sutterella sp. CAG:397 2
species Sutterella sp. KLE1602 3 2
species Sutterella sp. YIT 12072 52 3
species Sutterella stercoricanis 2714 860 206 1 7
species Sutterella wadsworthensis 3241 968 293 33 11 9 13 1 4 10 3 7 3 2 1
species Sutterellaceae bacterium 4
species Suttonella indologenes 1
species Suttonella ornithocola 1
species Suttonella sp. R2A3 1
species Swingsia samuiensis 1
species Sym plasmid 1
species Symbiobacterium terraclitae 11
species Symbiobacterium thermophilum 222 1 4 2
species Symbiobacterium toebii 3061 2 1
species Symbiochloris symbiontica 1
species Symbiopectobacterium purcellii 1
species Symmachiella dynata 2
species Symploca atlantica 70
species Synarthrophyton chejuense 1
species Synchytrium taraxaci 8
species Synechococcus elongatus 6 19 1 2
species Synechococcus sp. CB0101 51
species Synechococcus sp. CBW1004 1
species Synechococcus sp. CBW1107 1
species Synechococcus sp. CBW1108 2
species Synechococcus sp. CC9902 1
species Synechococcus sp. JA-2-3B'a(2-13) 16 2
species Synechococcus sp. JA-3-3Ab 80
species Synechococcus sp. KORDI-100 7 3 1
species Synechococcus sp. KORDI-49 10
species Synechococcus sp. KORDI-52 4 1
species Synechococcus sp. M16.1 1
species Synechococcus sp. MEDNS5 1 1
species Synechococcus sp. Minos11 2
species Synechococcus sp. NB0720_010 1
species Synechococcus sp. NOUM97013 2
species Synechococcus sp. PCC 6312 1 2
species Synechococcus sp. PCC 7502 1 2
species Synechococcus sp. PROS-7-1 1
species Synechococcus sp. RCC307 7
species Synechococcus sp. ROS8604 1
species Synechococcus sp. RS9902 1
species Synechococcus sp. RS9909 1 1
species Synechococcus sp. RSCCF101 48 1
species Synechococcus sp. SynAce01 13 1
species Synechococcus sp. WH 7803 3
species Synechococcus sp. WH 8101 23
species Synechococcus sp. WH 8109 2 1
species Synechocystis sp. PCC 6714 8
species Synergistes jonesii 13
species Synergistes sp. 3_1_syn1 1 1 1
species Synergistota bacterium 2
species synthetic construct 1
species Syntrophaceticus schinkii 66
species Syntrophobacter fumaroxidans 145 1 1
species Syntrophobacter pfennigii 2
species Syntrophobacter wolinii 33 4
species Syntrophobacterium sulfatireducens 2
species Syntrophobotulus glycolicus 17 176 1 1 2
species Syntrophococcus sucromutans 898 23 4 4
species Syntrophomonas bryantii 99 64
species Syntrophomonas cellicola 97 13
species Syntrophomonas curvata 51 3
species Syntrophomonas erecta 94
species Syntrophomonas palmitatica 1 43
species Syntrophomonas sapovorans 927 205 2
species Syntrophomonas wolfei 1 61 88 3 2
species Syntrophomonas zehnderi 102
species Syntrophorhabdus aromaticivorans 29
species Syntrophotalea acetylenica 57 97 2
species Syntrophotalea acetylenivorans 58 1 1
species Syntrophotalea carbinolica 2 4 106 1 2
species Syntrophothermus lipocalidus 58 4 1 2
species Syntrophus aciditrophicus 2 38 4 2
species Synura echinulata 1
species Tabrizicola piscis 8
species Tahibacter aquaticus 1 1
species Taibaiella chishuiensis 9
species Taibaiella koreensis 7
species Taibaiella smilacinae 1
species Talaromyces amestolkiae 2
species Talaromyces atroroseus 5 1
species Talaromyces funiculosus 13
species Talaromyces marneffei 16 1
species Talaromyces neofusisporus 1
species Talaromyces pinophilus 14
species Talaromyces rugulosus 5 8
species Talaromyces stipitatus 13
species Talaromyces verruculosus 1
species Tamilnaduibacter salinus 21
species Tamlana carrageenivorans 5 1 1
species Tamlana crocina 4
species Tamlana sedimentorum 1
species Tamlana sp. s12 1
species Tangfeifania diversioriginum 15
species Tannerella forsythia 8 484 261 11 24 3 3
species Tannerella serpentiformis 2 262 4 2 1
species Tannerella sp. 3
species Tannerella sp. 6_1_58FAA_CT1 11 3
species Tannerella sp. AF04-6 3
species Tannerella sp. AM09-19 1 3
species Tannerella sp. CAG:118 4
species Tannerella sp. CAG:51 3
species Tannockella kyphosi 2 3
species Tanticharoenia sakaeratensis 1
species Taonella mepensis 3
species Tapinothrix clintonii 18
species Taranisvirus taranis 145
species Tardibacter chloracetimidivorans 22 1
species Tardiphaga robiniae 1
species Tateyamaria omphalii 3
species Tatumella citrea 29 2
species Tatumella ptyseos 7 38 2
species Tatumella sp. TA1 11
species Tatumella terrea 3
species Tautonia plasticadhaerens 91
species Taylorella asinigenitalis 2 1 2
species Taylorella equigenitalis 7 2 1 1
species Telluria mixta 2
species Tellurirhabdus bombi 1
species Tellurirhabdus rosea 1
species Telmatocola sphagniphila 1 2
species Telmatospirillum siberiense 154 46
species Temperatibacter marinus 1
species Tenacibaculum dicentrarchi 6
species Tenacibaculum discolor 2
species Tenacibaculum geojense 1
species Tenacibaculum japonica 1
species Tenacibaculum jejuense 2 3 1
species Tenacibaculum maritimum 9 1
species Tenacibaculum ovolyticum 1
species Tenacibaculum singaporense 1
species Tenacibaculum sp. SZ-18 4 1
species Tenacibaculum todarodis 1
species Tenericutes bacterium MO-XQ 19 2
species Tenericutes bacterium MZ-XQ 61 3
species Tenuibacillus halotolerans 7
species Tenuibacillus multivorans 15
species Tenuifilum thalassicum 119 2
species Tepidamorphus gemmatus 3
species Tepidanaerobacter acetatoxydans 18 94 1 1 2
species Tepidanaerobacter syntrophicus 1708 5 2
species Tepidibacillus fermentans 109
species Tepidibacter aestuarii 1 2
species Tepidibacter formicigenes 7
species Tepidibacter hydrothermalis 1 2
species Tepidibacter mesophilus 113 1
species Tepidibacter thalassicus 13
species Tepidiforma bonchosmolovskayae 62 2
species Tepidimicrobium ferriphilum 82 31 1
species Tepidimicrobium xylanilyticum 453
species Tepidimonas aquatica 1
species Tepidimonas arfidensis 7
species Tepidimonas fonticaldi 11
species Tepidimonas ignava 19
species Tepidimonas sp. AK30 8
species Tepidimonas sp. PL17 1
species Tepidimonas taiwanensis 2 4 1 2
species Tepidimonas thermarum 44 19
species Tepidiphilus margaritifer 1
species Tepidiphilus succinatimandens 2
species Tepiditoga spiralis 2
species Tequintavirus AKFV33 1
species Tequintavirus DT57C 1
species Tequintavirus FFH1 1
species Tequintavirus LLS 1
species Tequintavirus NBEco001 1
species Tequintavirus NBEco002 1
species Tequintavirus NBSal005 1
species Tequintavirus NR01 1
species Tequintavirus OSYSP 1
species Tequintavirus slur09 1
species Tequintavirus SP01 1
species Tequintavirus SP3 1
species Tequintavirus SSP1 1
species Tequintavirus T5 2
species Tequintavirus VEc33 1
species Tequintavirus VSe12 1
species Terasakiella pusilla 9
species Terasakiella sp. SH-1 38 1 2
species Terasakiispira papahanaumokuakeensis 5
species Teredinibacter haidensis 1
species Teredinibacter purpureus 2
species Teredinibacter turnerae 1 1 1
species Teretinema zuelzerae 4
species Terrabacter aerolatus 3
species Terrabacter tumescens 1
species Terracoccus luteus 6
species Terrahaemophilus aromaticivorans 1
species Terribacillus aidingensis 10 2
species Terribacillus goriensis 5 152 1 2 2
species Terribacillus halophilus 5 5
species Terribacillus sp. DMT04 1 2
species Terricaulis silvestris 55 1
species Terriglobus albidus 54 2
species Terriglobus roseus 154 1 1 2 1
species Terriglobus saanensis 1 6 3 2 1
species Terrihabitans soli 8 2
species Terrimicrobium sacchariphilum 6
species Terrimonas arctica 1
species Terrimonas lutea 2
species Terrimonas pekingensis 1
species Terrimonas rubra 15
species Terrisporobacter glycolicus 2 316 72 1 1 3 1 1
species Terrisporobacter hibernicus 1 3
species Terrisporobacter mayombei 1 1 1
species Terrisporobacter othiniensis 1 9 1
species Terrisporobacter petrolearius 833 43
species Terrisporobacter sp. SN16 9
species Tessaracoccus aquimaris 65 1 2
species Tessaracoccus defluvii 2
species Tessaracoccus flavescens 48
species Tessaracoccus flavus 85 2
species Tessaracoccus lapidicaptus 111 3
species Tessaracoccus sp. DT52 2
species Tessaracoccus sp. MC1865 1
species Tessaracoccus sp. SL014B-79A 20
species Tessaracoccus sp. T2.5-30 53 1
species Tessaracoccus timonensis 157 1
species Testudinibacter aquarius 1
species Tetragenococcus doogicus 2691 1 1 3
species Tetragenococcus halophilus 228 60 100 8 18 2
species Tetragenococcus koreensis 33 1 13 2
species Tetragenococcus muriaticus 18 62 4
species Tetragenococcus osmophilus 56 5 1 2
species Tetragenococcus solitarius 22
species Tetragenococcus sp. JNURIC-D1 1
species Tetrapisispora phaffii 1
species Texcoconibacillus texcoconensis 126 2
species Thalassiosira pseudonana 1
species Thalassobacillus cyri 3
species Thalassobius vesicularis 32
species Thalassococcus sp. S3 4 1 1
species Thalassococcus sp. SH-1 1
species Thalassocola ureilytica 3
species Thalassolituus maritimus 4
species Thalassolituus oleivorans 2
species Thalassolituus sp. C2-1 1
species Thalassomonas sediminis 1
species Thalassomonas viridans 1
species Thalassospira australica 1
species Thalassospira indica 20
species Thalassospira lucentensis 1
species Thalassospira marina 43 2
species Thalassospira tepidiphila 10
species Thalassospira xiamenensis 19
species Thalassospira xianhensis 3
species Thalassotalea agarivorans 2
species Thalassotalea crassostreae 1 1 2
species Thalassotalea eurytherma 6
species Thalassotalea ganghwensis 8
species Thalassotalea loyana 41
species Thalassotalea piscium 1 1
species Thalassotalea ponticola 18
species Thalassotalea sp. HSM 43 4 1
species Thalassotalea sp. LPB0316 1
species Thalassotalea sp. PS06 1
species Thalassovita gelatinovora 11 1
species Thauera aromatica 1 7 15 1 1
species Thauera chlorobenzoica 2
species Thauera humireducens 48
species Thauera linaloolentis 2
species Thauera mechernichensis 38
species Thauera selenatis 2 1
species Thauera sp. K11 113 3 1
species Thauera sp. MZ1T 76 1
species Thauera sp. WB-2 1 1
species Thauera terpenica 347 79
species Thaumasiovibrio subtropicus 1
species Theileria parva 4
species Theobroma cacao 1
species Thermacetogenium phaeum 13 19 115 1 1 2
species Thermaerobacter composti 3
species Thermaerobacter litoralis 1
species Thermaerobacter marianensis 190 5 2
species Thermaerobacter sp. FW80 202 1 1
species Thermaerobacter sp. PB12/4term 172 1 2
species Thermanaeromonas toyohensis 2 4 3
species Thermanaerosceptrum fracticalcis 2 2
species Thermanaerothrix daxensis 3 1
species Thermanaerovibrio acidaminovorans 3 85 2
species Thermanaerovibrio velox 1
species Thermasporomyces composti 46
species Thermicanus aegyptius 12 812 2 2
species Thermincola ferriacetica 45
species Thermincola potens 1 143 1 4 2
species Thermoactinomyces intermedius 6
species Thermoactinomyces vulgaris 334 42 2 2
species Thermoanaerobacter acetoethylicus 11 25
species Thermoanaerobacter brockii 6
species Thermoanaerobacter ethanolicus 1
species Thermoanaerobacter inferii 2
species Thermoanaerobacter italicus 1 2
species Thermoanaerobacter kivui 22 1 21 1 1
species Thermoanaerobacter mathranii 1
species Thermoanaerobacter siderophilus 1
species Thermoanaerobacter sp. X514 2
species Thermoanaerobacter sulfurigignens 2
species Thermoanaerobacter thermocopriae 3
species Thermoanaerobacter wiegelii 1 2
species Thermoanaerobacterium aotearoense 6
species Thermoanaerobacterium islandicum 812 1
species Thermoanaerobacterium saccharolyticum 6 1
species Thermoanaerobacterium sp. RBIITD 167 1
species Thermoanaerobacterium thermosaccharolyticum 1 203 20 7 2
species Thermoanaerobacterium xylanolyticum 79 2 2
species Thermoanaerobaculum aquaticum 95
species Thermobacillus composti 217 1 1 2
species Thermobacillus xylanilyticus 85
species Thermobaculum terrenum 783 238 2 1 2
species Thermobifida alba 1
species Thermobifida fusca 53 1 1
species Thermobifida halotolerans 1
species Thermobispora bispora 18 23 1 1
species Thermobrachium celere 2
species Thermocaproicibacter melissae 2 3
species Thermochaetoides thermophila 1 1
species Thermochromatium tepidum 13 1
species Thermoclostridium caenicola 2883 88 9 5
species Thermoclostridium stercorarium 34 356 245 1 4 3 1
species Thermococcus aciditolerans 1
species Thermococcus argininiproducens 1
species Thermococcus barophilus 4 1
species Thermococcus barossii 1
species Thermococcus chitonophagus 1
species Thermococcus eurythermalis 1
species Thermococcus gammatolerans 1 1
species Thermococcus gorgonarius 1 1
species Thermococcus henrietii 1
species Thermococcus paralvinellae 4
species Thermococcus peptonophilus 1
species Thermococcus piezophilus 4
species Thermococcus profundus 4
species Thermococcus radiotolerans 4
species Thermococcus sibiricus 1
species Thermococcus sp. 4557 4
species Thermococcus sp. Bubb.Bath 1
species Thermocoleostomius sinensis 2
species Thermocrinis albus 1 2
species Thermocrinis minervae 28
species Thermocrinis ruber 1 1
species Thermodesulfatator atlanticus 460 2
species Thermodesulfatator indicus 1 2
species Thermodesulfobacterium commune 1 1
species Thermodesulfobacterium geofontis 1 1 1
species Thermodesulfobacterium sp. TA1 1 2
species Thermodesulfobium acidiphilum 2
species Thermodesulfobium narugense 32 2 2 1 1
species Thermodesulfomicrobium thermophilum 165 1
species Thermodesulforhabdus norvegica 18
species Thermodesulfovibrio aggregans 80 1
species Thermodesulfovibrio islandicus 6
species Thermodesulfovibrio thiophilus 926 18 1 6
species Thermodesulfovibrio yellowstonii 1 18 3 2
species Thermofilum pendens 2
species Thermofilum uzonense 1
species Thermoflexibacter ruber 109
species Thermoflexus hugenholtzii 4
species Thermogemmatispora argillosa 65
species Thermogemmatispora foliorum 22 1
species Thermogemmatispora onikobensis 45 1
species Thermogladius calderae 1
species Thermogutta hypogea 5
species Thermogutta terrifontis 33 4 1
species Thermogymnomonas acidicola 21
species Thermohalobacter berrensis 52
species Thermohydrogenium kirishiense 42
species Thermoleophilum album 1 1
species Thermoleptolyngbya sichuanensis 4
species Thermoleptolyngbya sp. PKUAC-SCTB121 1
species Thermolithobacter carboxydivorans 48
species Thermolithobacter ferrireducens 13
species Thermolongibacillus altinsuensis 101
species Thermolongibacillus kozakliensis 4
species Thermomarinilinea lacunifontana 53
species Thermomicrobium roseum 5 6 1 2
species Thermomonas aquatica 4 1
species Thermomonas brevis 3 2 2
species Thermomonas hydrothermalis 2
species Thermomonas sp. HDW16 6
species Thermomonospora amylolytica 33 1 1
species Thermomonospora curvata 84 4 2
species Thermonema lapsum 1
species Thermophagus xiamenensis 106
species Thermophilibacter immobilis 2
species Thermoplasma volcanium 1
species Thermoplasmata archaeon 1
species Thermoplasmatales archaeon BRNA1 8 1
species Thermopolyspora flexuosa 6
species Thermoproteus tenax 1
species Thermoproteus uzoniensis 1
species Thermorudis peleae 10
species Thermosediminibacter litoriperuensis 34 3
species Thermosediminibacter oceani 105 1 2
species Thermosinus carboxydivorans 10
species Thermosipho activus 1
species Thermosipho affectus 1
species Thermosipho africanus 9 1 1
species Thermosipho atlanticus 1
species Thermosipho ferriphilus 7
species Thermosipho ferrireducens 1
species Thermosipho melanesiensis 11 2
species Thermosphaera aggregans 1
species Thermospira aquatica 2
species Thermosporothrix hazakensis 21
species Thermosporothrix sp. COM3 9
species Thermostaphylospora chromogena 5
species Thermosulfidibacter takaii 4 1
species Thermosulfurimonas marina 20 2
species Thermosulfuriphilus ammonigenes 1 2
species Thermosynechococcus sp. NK55a 1
species Thermosynechococcus sp. TA-1 1
species Thermosynechococcus vestitus 1 1
species Thermotalea metallivorans 1
species Thermothelomyces thermophilus 2 8
species Thermothielavioides terrestris 1 9
species Thermotoga caldifontis 1 2
species Thermotoga petrophila 2
species Thermotoga profunda 2 1
species Thermotoga sp. RQ2 1
species Thermotoga sp. RQ7 1
species Thermotomaculum hydrothermale 16 1 2
species Thermovenabulum ferriorganovorum 294 29 6
species Thermovenabulum gondwanense 1
species Thermovibrio ammonificans 3 1 2
species Thermovibrio ruber 16 1
species Thermovirga lienii 3 3 2
species Thermovorax subterraneus 1
species Thermus aquaticus 33 1 1
species Thermus arciformis 4
species Thermus brockianus 2 1
species Thermus caldilimi 10
species Thermus kawarayensis 7
species Thermus oshimai 30 2
species Thermus parvatiensis 1 1
species Thermus rehai 13
species Thermus scotoductus 12 6 18 1
species Thermus sp. CCB_US3_UF1 1
species Thermus tengchongensis 1
species Thermus thermophilus 85 26 68 1
species Thioalbus denitrificans 2
species Thioalkalicoccus limnaeus 5
species Thioalkalispira microaerophila 9
species Thioalkalivibrio halophilus 2
species Thioalkalivibrio jannaschii 724 5
species Thioalkalivibrio nitratireducens 1 19 1 1
species Thioalkalivibrio nitratis 3
species Thioalkalivibrio paradoxus 1 7 3
species Thioalkalivibrio sp. K90mix 13 1 1
species Thioalkalivibrio sulfidiphilus 128 1 1
species Thioalkalivibrio thiocyanoxidans 2
species Thioalkalivibrio versutus 6 21 1
species Thiobacillus denitrificans 3 27 2 2
species Thiobacillus sajanensis 50 5
species Thiobacillus sp. 44
species Thiobacillus thioparus 1
species Thiobacillus thiophilus 653 1
species Thiobacter subterraneus 22 2
species Thiocapsa bogorovii 7 2
species Thiocapsa litoralis 5 4
species Thiocapsa marina 120 1
species Thiocapsa pendens 16
species Thiocapsa purpurea 2
species Thiocapsa roseopersicina 1
species Thioclava dalianensis 1
species Thioclava nitratireducens 6
species Thioclava pacifica 4
species Thiocystis violacea 7
species Thiocystis violascens 99 58 3 2
species Thiofaba tepidiphila 3
species Thiofilum flexile 5
species Thioflavicoccus mobilis 96 1 2
species Thiohalobacter sp. COW1 1
species Thiohalobacter thiocyanaticus 162 70
species Thiohalocapsa halophila 35
species Thiohalocapsa marina 87 1
species Thiohalomonas denitrificans 2
species Thiohalomonas nitratireducens 7
species Thiohalophilus thiocyanatoxydans 1
species Thiohalorhabdus denitrificans 2290 203 2 1
species Thiohalospira alkaliphila 12
species Thiohalospira halophila 1
species Thiolamprovum pedioforme 345
species Thiolapillus brandeum 28 1
species Thiolinea disciformis 2
species Thiomicrorhabdus aquaedulcis 1 1
species Thiomicrorhabdus chilensis 1 1
species Thiomicrorhabdus frisia 1
species Thiomicrorhabdus immobilis 2
species Thiomicrorhabdus indica 1
species Thiomicrorhabdus sediminis 6 2
species Thiomicrorhabdus xiamenensis 3 1
species Thiomicrospira aerophila 34 71 1
species Thiomicrospira cyclica 1
species Thiomicrospira microaerophila 1
species Thiomicrospira sibirica 440 1
species Thiomonas arsenitoxydans 17 1
species Thiomonas bhubaneswarensis 9
species Thiomonas delicata 2 1
species Thiomonas intermedia 45 52 2
species Thiomonas islandica 16
species Thiomonas perometabolis 73
species Thiomonas sp. X19 1
species Thiomonas thermosulfata 1063 1 1
species Thiophaeococcus mangrovi 17
species Thioploca ingrica 3
species Thiopseudomonas alkaliphila 6 2
species Thioreductor micantisoli 4
species Thiorhodococcus mannitoliphagus 189 6
species Thiorhodococcus modestalkaliphilus 8
species Thiorhodococcus pfennigii 668
species Thiorhodospira sibirica 5
species Thiorhodovibrio winogradskyi 86
species Thiospirochaeta perfilievii 1 8 1 2
species Thiosulfativibrio zosterae 2
species Thiothrix caldifontis 7 4
species Thiothrix defluvii 38
species Thiothrix eikelboomii 29
species Thiothrix fructosivorans 229 21
species Thiothrix lacustris 4 15
species Thiothrix litoralis 1
species Thiothrix nivea 40 1
species Thiothrix ramosa 279
species Thiothrix sp. 49
species Thiothrix subterranea 2
species Thiothrix unzii 1
species Thiothrix winogradskyi 1
species Thiovirga sulfuroxydans 1 93
species Thomasclavelia cocleata 1334 1 1 2 2
species Thomasclavelia ramosa 1064 482 38 18 19 8 23 5 8 3 1
species Thomasclavelia saccharogumia 621 4 8 20 2 2 1 2
species Thomasclavelia sp. 1
species Thomasclavelia spiroformis 1080 41 6 12 14 2 8 3 1
species Thorsellia anophelis 77
species Thyridium curvatum 1
species Tichowtungia aerotolerans 128 2
species Tidjanibacter massiliensis 3 2
species Tidjanibacter sp. 2
species Tilletiaria anomala 1
species Tilletiopsis washingtonensis 2 1
species Tindallia californiensis 19
species Tindallia magadiensis 3856 3 1 2
species Tindallia texcoconensis 8
species Tissierella carlieri 3
species Tissierella creatinini 4
species Tissierella creatinophila 51
species Tissierella praeacuta 9 3
species Tissierellia bacterium S7-1-4 1
species Tistlia consotensis 1 1
species Tistrella bauzanensis 1
species Tistrella mobilis 78 2 1
species TM7 phylum sp. oral clone CW040 2
species TM7 phylum sp. oral clone DR034 2
species TM7 phylum sp. oral clone FR058 2
species TM7 phylum sp. oral taxon 352 4
species Tolumonas auensis 1157 3 72 1 2 2
species Tolumonas osonensis 1
species Tomitella biformata 26
species Tomitella fengzijianii 40
species Tonsilliphilus suis 9
species Tortoise microvirus 40 8 1
species Toutatisvirus toutatis 141 1 1
species Toxoplasma gondii 5 1
species Trabulsiella guamensis 182
species Trabulsiella odontotermitis 507 1 1 2
species Trachelomonas grandis 1
species Tractidigestivibacter scatoligenes 190 3 1
species Trametes hirsuta 1 1
species Trametes versicolor 4
species Tranquillimonas alkanivorans 1
species Traorella massiliensis 1 4
species Trebouxia aggregata 1
species Treponema amylovorum 1 8
species Treponema berlinense 30 9
species Treponema brennaborense 5 198 1 5 3
species Treponema bryantii 8 10
species Treponema calligyrum 13
species Treponema denticola 4 106 1 4 2
species Treponema lecithinolyticum 4
species Treponema medium 3 1 2
species Treponema paraluiscuniculi 89
species Treponema parvum 2 3 3
species Treponema pectinovorum 1
species Treponema pedis 78 5 2
species Treponema peruense 1 2
species Treponema phagedenis 235 2
species Treponema porcinum 130 3 1
species Treponema primitia 123 1 2
species Treponema putidum 103 2
species Treponema refringens 113
species Treponema saccharophilum 5
species Treponema socranskii 6 7 201 1 1 2
species Treponema sp. B152 1
species Treponema sp. OMZ 305 2
species Treponema sp. OMZ 787 1
species Treponema sp. OMZ 788 1
species Treponema sp. OMZ 799 2
species Treponema sp. OMZ 838 76 1
species Treponema sp. OMZ 906 2
species Treponema succinifaciens 160 4 212 1 2 2
species Treponema vincentii 2 111 2
species Treponema zioleckii 52
species Trichlorobacter lovleyi 171 1 5 2
species Trichococcus flocculiformis 29 33
species Trichocoleus desertorum 2
species Trichoderma asperellum 1 1
species Trichoderma atroviride 1 1
species Trichoderma gamsii 1
species Trichoderma reesei 2 2
species Trichoderma simmonsii 1
species Trichoderma virens 1
species Trichodesmium erythraeum 3
species Trichodesmium havanum 31
species Trichodesmium hildebrandtii 1
species Trichodesmium tenue 1
species Trichomonas vaginalis 1
species Trichormus azollae 1 1 1
species Trichormus variabilis 1
species Trichosporon asahii 30
species Trichostrongylus tenuis 1
species Trieres chinensis 1
species Trinickia dabaoshanensis 2
species Trinickia soli 4
species Trinickia violacea 39 1 2
species Tritonibacter mobilis 2
species Tropheryma whipplei 84
species Truepera radiovictrix 24 79 2
species Trueperella bernardiae 60 5 1 1 2
species Trueperella bialowiezensis 1 47 2
species Trueperella bonasi 6
species Trueperella pecoris 2
species Trueperella pyogenes 6 4 1 251 1 4 2 2 1
species Tryblionella apiculata 1
species Trypanosoma congolense 1
species Trypanosoma conorhini 1
species Trypanosoma cruzi 1
species Tsukamurella paurometabola 1 59 4 2
species Tsukamurella pulmonis 2
species Tsukamurella soli 4
species Tsukamurella tyrosinosolvens 32 1
species Tsunamia transpacifica 1
species Tsuneonella amylolytica 8 1
species Tsuneonella dongtanensis 1 5 1
species Tsuneonella mangrovi 2 1 1
species Tsuneonella troitsensis 15
species Tuberibacillus calidus 27 1
species Tulasnella sp. CLM417 1
species Tumebacillus algifaecis 124 2
species Tumebacillus avium 192 1 1 2
species Tumebacillus flagellatus 5
species Tumebacillus ginsengisoli 1
species Tumebacillus permanentifrigoris 67
species Tunicatimonas pelagia 71
species Turicibacter bilis 2 3 2
species Turicibacter sanguinis 2033 966 468 247 8 6 10 2 4 3 2 3 4 2
species Turicibacter sp. 4
species Turicibacter sp. H121 267 6 4 3 1
species Turicibacter sp. HGF1 5 3
species Turicibacter sp. LA62 6
species Turicibacter sp. TJ11 2
species Turicimonas muris 3
species Turneriella parva 18 4 2 1 2
species Tuwongella immobilis 2 2
species Tychonema bourrellyi 434 1
species Tyzzerella sp. 4
species Tyzzerella sp. An114 3
species UAG-readthrough crAss clade sp. 1
species Uliginosibacterium gangwonense 551 112 3
species Ulva intestinalis 1
species Umboniibacter marinipuniceus 1
species Umezawaea tangerina 1
species Uncinocarpus reesii 1 1
species unclassified Ruminococcaceae (miscellaneous) 17 4 1 3
species uncultured Acetatifactor sp. 4
species uncultured Acetobacter sp. 1
species uncultured Acidaminococcus sp. 17
species uncultured Acidiphilium sp. 1
species uncultured Acidobacteriaceae bacterium 2
species uncultured Acidobacteriota bacterium 67 2
species uncultured Acinetobacter sp. 1
species uncultured Actinobacillus sp. 2
species uncultured Actinomyces sp. 1 4
species uncultured Actinomycetales bacterium 5
species uncultured Actinomycetes bacterium 37
species uncultured Adlercreutzia sp. 1 3
species uncultured Agathobacter sp. 4
species uncultured Agathobaculum sp. 4
species uncultured Aggregatibacter sp. 1
species uncultured Akkermansia sp. 3
species uncultured Akkermansia sp. SMG25 67
species uncultured Alicyclobacillus sp. 10
species uncultured Alistipes sp. 113 4 8 4
species uncultured Allisonella sp. 1
species uncultured Alphaproteobacteria bacterium 107 2
species uncultured anaerobic bacterium 1
species uncultured Anaerobutyricum sp. 4
species uncultured Anaerococcus sp. 3
species uncultured Anaeromassilibacillus sp. 4
species uncultured Anaeroplasmataceae bacterium 1
species uncultured Anaerosacchariphilus sp. 4
species uncultured Anaerostipes sp. 1 4
species uncultured Anaerotignum sp. 4
species uncultured Anaerotruncus sp. 3
species uncultured Angelakisella sp. 4
species uncultured archaeon 41 1
species uncultured Armatimonadetes bacterium 2
species uncultured Arsenophonus sp. 1
species uncultured Asaccharobacter sp. 2
species uncultured Atopobiaceae bacterium 3
species uncultured Atopobium sp. 1
species uncultured Atribacterota bacterium 4
species uncultured Azospirillum sp. 2
species uncultured Bacillales bacterium 1
species uncultured Bacilli bacterium 4
species uncultured Bacillus sp. 5
species uncultured bacterium 280 3 1 4
species uncultured bacterium (human infant) S2F 1
species uncultured bacterium 10o08 64
species uncultured bacterium 15d03 4
species uncultured bacterium 15m04 131 1
species uncultured bacterium 1i11 171
species uncultured bacterium 21f12 30
species uncultured bacterium 22g15 185
species uncultured bacterium 24i11 228
species uncultured bacterium 25H09 212
species uncultured bacterium 2M03 39
species uncultured bacterium 31i10a 128
species uncultured bacterium 31i10b 214 1
species uncultured bacterium 32o03 78 1
species uncultured bacterium 33g04 99 1
species uncultured bacterium 35i19 204 1
species uncultured bacterium 37b14 13
species uncultured bacterium 3b03 166 1
species uncultured bacterium 3e18 87
species uncultured bacterium 40k7 114 1
species uncultured bacterium 4h09 209
species uncultured bacterium 4L05 99
species uncultured bacterium 52B7 215 1
species uncultured bacterium 5G4 1
species uncultured bacterium 8j18 5
species uncultured bacterium BAC10G6 2
species uncultured bacterium BAC25G1 2
species uncultured bacterium Contig11 129
species uncultured bacterium Contig14 6
species uncultured bacterium Contig1477 10
species uncultured bacterium Contig1480 16
species uncultured bacterium Contig1490 16
species uncultured bacterium Contig1495 2
species uncultured bacterium Contig1500 27
species uncultured bacterium Contig1529 3
species uncultured bacterium Contig1549a 3
species uncultured bacterium Contig1578 2
species uncultured bacterium Contig1586 26
species uncultured bacterium Contig160 19
species uncultured bacterium Contig1604 66
species uncultured bacterium Contig1625 50
species uncultured bacterium Contig1756 4
species uncultured bacterium Contig1762 1
species uncultured bacterium Contig1795 1
species uncultured bacterium Contig1831 49
species uncultured bacterium Contig203 6
species uncultured bacterium Contig21 2
species uncultured bacterium Contig27 5
species uncultured bacterium Contig28b 6
species uncultured bacterium Contig29 2
species uncultured bacterium Contig33 5
species uncultured bacterium Contig3b 4
species uncultured bacterium Contig9 31
species uncultured bacterium Contig99 1
species uncultured bacterium DCM001Kan16 2
species uncultured bacterium DCM001Tet01 19
species uncultured bacterium DCM002Carb01 23
species uncultured bacterium DCM003Kan08 4
species uncultured bacterium DCM004Carb02 1
species uncultured bacterium DCM004Kan06 85
species uncultured bacterium DCM005Carb03 5
species uncultured bacterium DCM005Kan02 1
species uncultured bacterium DCM008Cm02 1
species uncultured bacterium EB1 239 1
species uncultured bacterium EB2 251 1
species uncultured bacterium EB3 7
species uncultured bacterium EB4 219
species uncultured bacterium EB5 220 1
species uncultured bacterium fosmid pJB92C9 6
species uncultured bacterium IN-02 32
species uncultured bacterium IN-04 5
species uncultured bacterium IN-05 34
species uncultured bacterium IN-06 11
species uncultured bacterium scaffold00056 69
species uncultured bacterium URE4 13
species uncultured bacterium X112 2
species uncultured bacterium zdt-25h14 2
species uncultured Bacteroidaceae bacterium 28 1
species uncultured Bacteroidales bacterium 175 1 4
species uncultured Bacteroides sp. 203 1 1 4
species uncultured Bacteroidetes bacterium 221 3
species uncultured Bariatricus sp. 4
species uncultured Barnesiella sp. 4
species uncultured Basidiomycota 1
species uncultured beta proteobacterium 55
species uncultured Bifidobacterium sp. 98 3
species uncultured Bilophila sp. 9 4
species uncultured Blautia sp. 185 1 4
species uncultured Bulleidia sp. 2
species uncultured Burkholderia sp. 1
species uncultured Burkholderiales bacterium 220 1
species uncultured Butyricicoccus sp. 4
species uncultured Butyricimonas sp. 4
species uncultured Butyrivibrio sp. 1
species uncultured candidate division SR1 bacterium 2
species uncultured Candidatus Melainabacteria bacterium 61 4
species uncultured Caudovirales phage 112 1
species uncultured Chloroflexota bacterium 8
species uncultured Christensenella sp. 3
species uncultured Christensenellaceae bacterium 2
species uncultured Chroococcidiopsis sp. 11
species uncultured Citrobacter sp. 3
species uncultured Cloacibacillus sp. 2
species uncultured Clostridia bacterium 23 4
species uncultured Clostridiaceae bacterium 33 1 4
species uncultured Clostridium sp. 100 1 4
species uncultured Collinsella sp. 117 1 3
species uncultured Collinsella sp. SMG3 159
species uncultured Coprobacillus sp. 39
species uncultured Coprobacter sp. 4
species uncultured Coprococcus sp. 10 4
species uncultured Coraliomargarita sp. 1
species uncultured Coriobacteriaceae bacterium 1 3
species uncultured Coriobacteriales bacterium 2
species uncultured Coriobacteriia bacterium 2
species uncultured Corynebacterium sp. 1
species uncultured crAssphage 55 8 4 1
species uncultured Cryomorphaceae bacterium 3
species uncultured Cryptobacterium sp. 1
species uncultured Cupriavidus sp. 2
species uncultured cyanobacterium 7
species uncultured delta proteobacterium 15
species uncultured denitrifying bacterium 1
species uncultured Desulfobacterium sp. 1
species uncultured Desulfovibrio sp. 4 2
species uncultured Desulfovibrionaceae bacterium 1
species uncultured Dialister sp. 8 1 2
species uncultured Dorea sp. 176 1 1 4
species uncultured Duodenibacillus sp. 3
species uncultured Dysosmobacter sp. 4
species uncultured Eggerthella sp. 16 1 4
species uncultured Eggerthella sp. SMG5 51
species uncultured Eggerthellaceae bacterium 4
species uncultured Eisenbergiella sp. 4
species uncultured Ellagibacter sp. 1
species uncultured Enorma sp. 1
species uncultured Enterobacter sp. 3
species uncultured Enterobacterales bacterium 1
species uncultured Enterobacteriaceae bacterium 3
species uncultured Enterocloster sp. 4
species uncultured Enterococcus sp. 12 2
species uncultured Erysipelotrichaceae bacterium 6 1 3
species uncultured Escherichia sp. 8 3
species uncultured Eubacteriales bacterium 53 1 4
species uncultured Eubacterium sp. 111 1 1 4
species uncultured eubacterium WCHB1-41 2
species uncultured eubacterium WD272 2
species uncultured Faecalibacillus sp. 4
species uncultured Faecalibacterium sp. 125 1 4
species uncultured Faecalicoccus sp. 1
species uncultured Finegoldia sp. 1
species uncultured Firmicutes bacterium 240 1 4
species uncultured Flavobacteriaceae bacterium 130
species uncultured Flavobacteriales bacterium 1
species uncultured Flavobacteriia bacterium 2
species uncultured Flavonifractor sp. 4
species uncultured Francisella sp. 1
species uncultured Frankia sp. 23
species uncultured fungus 27 1
species uncultured Fusicatenibacter sp. 4
species uncultured Fusobacterium sp. 1 1 1
species uncultured Gammaproteobacteria bacterium 35
species uncultured Gemmiger sp. 1 4
species uncultured Geobacter sp. 1
species uncultured Gordonibacter sp. 4
species uncultured Granulicatella sp. 1
species uncultured Haemophilus sp. 2
species uncultured Hafnia sp. 2
species uncultured Holdemanella sp. 3
species uncultured Holdemania sp. 1
species uncultured human fecal virus 209 1 12
species uncultured Intestinibacter sp. 3
species uncultured Intestinimonas sp. 4
species uncultured Klebsiella sp. 6
species uncultured Lachnoanaerobaculum sp. 1
species uncultured Lachnobacterium sp. 1 4
species uncultured Lachnoclostridium sp. 4
species uncultured Lachnospira sp. 1 4
species uncultured Lachnospiraceae bacterium 252 1 1 4
species uncultured Lacticaseibacillus sp. 1
species uncultured Lactobacillus sp. 42 1 3
species uncultured Lactococcus sp. 2
species uncultured Lentisphaeria bacterium 3
species uncultured Leuconostoc sp. 1
species uncultured Ligilactobacillus sp. 1
species uncultured Limnohabitans sp. 3
species uncultured Mailhella sp. 1
species uncultured marine bacterium 54
species uncultured marine thaumarchaeote KM3_41_D11 1
species uncultured marine virus 20
species uncultured Marvinbryantia sp. 4
species uncultured Massilimicrobiota sp. 1
species uncultured Mediterraneibacter sp. 4
species uncultured Merdibacter sp. 3
species uncultured Methanobrevibacter sp. 4
species uncultured methanogenic archaeon 3 1
species uncultured Methanosphaera sp. 3
species uncultured Mogibacterium sp. 1
species uncultured Mollicutes bacterium 1 1 3
species uncultured Moraxellaceae bacterium 1
species uncultured Mordavella sp. 1
species uncultured Muribaculaceae bacterium 4 1
species uncultured Muribaculum sp. 18
species uncultured murine large bowel bacterium BAC 31B 215 1
species uncultured murine large bowel bacterium BAC 54B 1
species uncultured Mycoplasma sp. 3
species uncultured Mycoplasmataceae bacterium 1
species uncultured Mycoplasmatota bacterium 1 1 4
species uncultured Negativibacillus sp. 1
species uncultured Neglectibacter sp. 2
species uncultured Nitrososphaerota archaeon 1
species uncultured Odoribacter sp. 1 4
species uncultured Olsenella sp. 2
species uncultured Opitutales bacterium 1
species uncultured Opitutia bacterium 1
species uncultured organism 1
species uncultured Oscillibacter sp. 1 4
species uncultured Oscillospira sp. 1
species uncultured Oscillospiraceae bacterium 20 1 1 4
species uncultured Oxalobacter sp. 2
species uncultured Parabacteroides sp. 88 1 4
species uncultured Paraprevotella sp. 3
species uncultured Parasutterella sp. 102 4
species uncultured Peptococcaceae bacterium 1
species uncultured Peptoniphilus sp. 3
species uncultured Peptostreptococcus sp. 1 1
species uncultured Phaeodactylum sp. 1
species uncultured phage 121
species uncultured Phascolarctobacterium sp. 15 1 4
species uncultured Phocaeicola sp. 4
species uncultured pig faeces bacterium 225 1
species uncultured Porphyromonadaceae bacterium 13 1 3
species uncultured Porphyromonas sp. 1
species uncultured Prevotella sp. 151 1 1 3
species uncultured Prevotellaceae bacterium 5 1 1
species uncultured Prochlorococcus sp. 71
species uncultured Propionigenium sp. 1
species uncultured Pseudobutyrivibrio sp. 1 3
species uncultured Pseudoflavonifractor sp. 26 1 1
species uncultured Pseudomonadota bacterium 2
species uncultured Pseudomonas sp. 5
species uncultured Pseudoxanthomonas sp. 1
species uncultured Pucciniomycotina 1
species uncultured Ralstonia sp. 1
species uncultured Rhizobium sp. 7
species uncultured Rickettsiales bacterium 1
species uncultured Robinsoniella sp. 1 1
species uncultured Romboutsia sp. 4
species uncultured Roseburia sp. 72 1 4
species uncultured Rothia sp. 1
species uncultured rumen bacterium 261 1
species uncultured Ruminiclostridium sp. 2
species uncultured Ruminococcaceae bacterium 1
species uncultured Ruminococcus sp. 195 1 1 4
species uncultured Ruthenibacterium sp. 4
species uncultured Salmonella sp. 2
species uncultured Sarcina sp. 1
species uncultured Schaedlerella sp. 2
species uncultured Selenomonadales bacterium 3
species uncultured Senegalimassilia sp. 2
species uncultured Shigella sp. 3
species uncultured Shuttleworthella sp. 3
species uncultured Slackia sp. 1 2
species uncultured sludge bacterium H2 2
species uncultured soil bacterium 58 2
species uncultured Solobacterium sp. 1 4
species uncultured Sphingobacteriales bacterium 2
species uncultured Sphingobacteriia bacterium 2
species uncultured Sphingopyxis sp. 6
species uncultured Staphylococcus sp. 1
species uncultured Streptococcus sp. 27 1 4
species uncultured Subdoligranulum sp. 4
species uncultured sulfate-reducing bacterium 8
species uncultured Sutterella sp. 18 1 4
species uncultured Sutterellaceae bacterium 1
species uncultured Termite group 1 bacterium 1
species uncultured Termite group 1 bacterium phylotype Rs-D17 1
species uncultured Terriglobales bacterium 2
species uncultured Terrisporobacter sp. 3
species uncultured Tidjanibacter sp. 2
species uncultured Tissierellia bacterium 2
species uncultured Tuber 1
species uncultured Turicibacter sp. 4
species uncultured Turicimonas sp. 1
species uncultured Veillonella sp. 1 1
species uncultured Verminephrobacter sp. 1
species uncultured Verrucomicrobiota bacterium 1
species uncultured Victivallales bacterium 3
species uncultured Victivallis sp. 3
species uncultured virus 1
species Undibacterium macrobrachii 17
species Undibacterium oligocarboniphilum 8
species Undibacterium parvum 3 2 2 1
species Undibacterium piscinae 4
species Undibacterium rivi 1
species Undibacterium sp. KW1 2 2
species Undibacterium sp. YM2 8 1
species unidentified bacterial endosymbiont 1
species unidentified low G+C gram-positive bacterium 1
species unidentified marine bacterioplankton 1 6
species unidentified plasmid 1
species unidentified Verrucomicrobium group OPB35 2
species unidentified virus 1
species Urbifossiella limnaea 1
species Ureaplasma canigenitalium 1
species Ureaplasma cati 2
species Ureaplasma diversum 1 1
species Ureaplasma felinum 2 7
species Ureaplasma gallorale 17 17 1
species Ureaplasma parvum 14 16 2
species Ureaplasma urealyticum 2 10 4 1 1
species Urechidicola croceus 4 1
species Ureibacillus defluvii 36
species Ureibacillus suwonensis 1
species Ureibacillus terrenus 18 21
species Ureibacillus thermophilus 110 84 1
species Ureibacillus thermosphaericus 2 46 2
species Urmitella timonensis 2 2
species Uronema confervicola 1
species Ursidibacter arcticus 77
species Uruburuella suis 2
species Uruburuella testudinis 1
species Usitatibacter palustris 31 1
species Usitatibacter rugosus 1
species Ustilaginoidea virens 1
species Ustilago bromivora 1 1
species Ustilago maydis 1
species Vaccinia virus 1
species Vaginimicrobium propionicum 238 2
species Vagococcus carniphilus 28 2
species Vagococcus coleopterorum 8 2
species Vagococcus entomophilus 26
species Vagococcus fluvialis 2 7 1 2
species Vagococcus hydrophili 67 1 2
species Vagococcus lutrae 35 2 2
species Vagococcus penaei 865 4 44 2 2
species Vagococcus salmoninarum 8 2
species Vagococcus sp. CY52-2 1 1
species Vagococcus teuberi 747 1 77 4 2
species Vagococcus xieshaowenii 70 1 2
species Vagococcus zengguangii 24 2
species Vallitalea guaymasensis 109 2 2 9 3
species Vallitalea pronyensis 30 3 1 2 3 3
species Vampirovibrio chlorellavorus 67 3
species Vanrija pseudolonga 1
species Varibaculum cambriense 273 392 43 1 4
species Varibaculum massiliense 1
species Varibaculum sp. 41 2
species Varibaculum sp. CCUG 45114 196
species Varibaculum sp. CCUG 45271 1
species Varibaculum sp. CCUG 61255 21
species Variibacter gotjawalensis 1 19 2 1
species Variovorax boronicumulans 25 8 3 1
species Variovorax dokdonensis 6 7
species Variovorax ginsengisoli 1
species Variovorax paradoxus 18 2 220 4 2
species Variovorax soli 22 1
species Variovorax sp. HW608 24 3
species Variovorax sp. PAMC 28711 11 2
species Variovorax sp. PAMC26660 1
species Variovorax sp. PAMC28562 1
species Variovorax sp. PBL-E5 3
species Variovorax sp. PBL-H6 7
species Variovorax sp. PBS-H4 10
species Variovorax sp. PDC80 1
species Variovorax sp. PMC12 14 3
species Variovorax sp. RA8 8 1
species Variovorax sp. SRS16 3 1
species Variovorax sp. WDL1 10 2
species Variovorax sp. WS11 1
species Varunaivibrio sulfuroxidans 2
species Veillonella atypica 2710 434 68 243 4 4 1 3 4 6 2 3
species Veillonella caviae 228 2
species Veillonella criceti 4144 103 1 1
species Veillonella denticariosi 617 3
species Veillonella dispar 2784 1015 2 227 5 11 8 1 5 2 2
species Veillonella infantium 1 1
species Veillonella magna 106 191 1
species Veillonella montpellierensis 2830 231 5 1 6
species Veillonella nakazawae 247 2
species Veillonella parvula 2291 3 264 267 11 3 9 24 1 6 3 1
species Veillonella ratti 434 3
species Veillonella rodentium 1 232 1 3 2
species Veillonella rogosae 47 1 1 1 2 1 2 1
species Veillonella seminalis 4 3
species Veillonella sp. 4 2
species Veillonella sp. 2011_Ileo_VSA_C12 1
species Veillonella sp. 2011_Ileo_VSA_E1 3
species Veillonella sp. 2011_Ileo_VSA_G9 2
species Veillonella sp. 2011_Oral_VSA_B12 33
species Veillonella sp. 2011_Oral_VSA_C12 1
species Veillonella sp. 2011_Oral_VSA_C9 3
species Veillonella sp. 2011_Oral_VSA_D12 21
species Veillonella sp. 2011_Oral_VSA_D3 303
species Veillonella sp. 3_1_44 1
species Veillonella sp. 6_1_27 5
species Veillonella sp. ACP1 1 2
species Veillonella sp. ADV 269.01 15
species Veillonella sp. ADV 3107.03 6
species Veillonella sp. AS16 32
species Veillonella sp. CM60 161
species Veillonella sp. HPA0037 2 2
species Veillonella sp. ICM51a 2
species Veillonella sp. JL-2 14
species Veillonella sp. MSA12 2 89
species Veillonella sp. OK1 4
species Veillonella sp. OK9 1
species Veillonella sp. oral taxon 158 1 7 1
species Veillonella sp. oral taxon 780 6
species Veillonella sp. R-32 1
species Veillonella sp. S101 1 1
species Veillonella sp. S12025-13 2
species Veillonella sp. S13053-19 1 1
species Veillonella sp. S4-AA2-6 1
species Veillonella sp. T34266-5 2
species Veillonella sp. VA141 1
species Veillonella tobetsuensis 3 1
species Veillonellaceae bacterium 1 1
species Venatoribacter cucullus 2
species Venustampulla echinocandica 1
species Vequintavirus APECc02 4
species Vequintavirus FFH2 4
species Vequintavirus FV3 4
species Vequintavirus JES2013 4
species Vequintavirus murica 4
species Vequintavirus slur16 1
species Vequintavirus V18 4
species Verminephrobacter aporrectodeae 39 2
species Verminephrobacter eiseniae 6 21 1 1
species Verrucomicrobia bacterium CAG:312_58_20 1
species Verrucomicrobia bacterium IMCC26134 39 1
species Verrucomicrobia bacterium S94 136 1
species Verrucomicrobiia bacterium 1
species Verrucomicrobiota bacterium 3
species Verrucomicrobium sp. GAS474 102
species Verrucomicrobium spinosum 120 2 1
species Verrucosispora sp. NA02020 10 1
species Verrucosispora sp. WMMC514 1
species Verticiella sediminum 1
species Verticillium dahliae 1
species Verticillium nonalfalfae 1
species Vescimonas coprocola 2 4 3 1
species Vescimonas fastidiosa 2 1 3 1
species Vespertiliibacter pulmonis 3 5
species Vibrio aerogenes 1
species Vibrio aestuarianus 9
species Vibrio alfacsensis 1 2
species Vibrio algicola 1 1
species Vibrio alginolyticus 1 1
species Vibrio anguillarum 27
species Vibrio aphrogenes 1
species Vibrio aquimaris 1
species Vibrio artabrorum 1
species Vibrio astriarenae 1 2
species Vibrio atlanticus 1 1
species Vibrio bivalvicida 2
species Vibrio breoganii 1 2
species Vibrio campbellii 3 2
species Vibrio caribbeanicus 7
species Vibrio casei 1 1
species Vibrio chagasii 1
species Vibrio cholerae 159 1 2
species Vibrio cidicii 2
species Vibrio cincinnatiensis 2
species Vibrio comitans 1
species Vibrio coralliilyticus 4 2 1
species Vibrio cortegadensis 1
species Vibrio crassostreae 1
species Vibrio diabolicus 1
species Vibrio europaeus 1
species Vibrio fluvialis 95 1 1
species Vibrio furnissii 22 1
species Vibrio gallaecicus 1
species Vibrio gallicus 1
species Vibrio gangliei 1
species Vibrio gazogenes 1 5 2 1 1
species Vibrio gigantis 1 2
species Vibrio harveyi 1 2
species Vibrio hippocampi 5
species Vibrio hispanicus 10
species Vibrio ishigakensis 2
species Vibrio jasicida 1
species Vibrio kanaloae 1
species Vibrio litoralis 14
species Vibrio mangrovi 1
species Vibrio maritimus 1
species Vibrio mediterranei 4
species Vibrio metoecus 4 2
species Vibrio metschnikovii 1 1 1
species Vibrio mimicus 5 1
species Vibrio natriegens 1
species Vibrio navarrensis 5 1
species Vibrio neonatus 7
species Vibrio nigripulchritudo 7 3 1
species Vibrio owensii 1
species Vibrio palustris 1
species Vibrio panuliri 1
species Vibrio parahaemolyticus 1 82 1 3 3
species Vibrio pelagius 1
species Vibrio pommerensis 21 1
species Vibrio porteresiae 57 23 2
species Vibrio rarus 1
species Vibrio ruber 1
species Vibrio rumoiensis 3 1 1
species Vibrio scophthalmi 2 1
species Vibrio sinaloensis 1
species Vibrio sp. B1FIG11 1
species Vibrio sp. B1FLJ16 1
species Vibrio sp. EJY3 1 2
species Vibrio sp. HDW18 1
species Vibrio sp. SCSIO 43135 1
species Vibrio sp. SCSIO 43136 1
species Vibrio sp. THAF190c 1
species Vibrio sp. VB16 1
species Vibrio spartinae 1
species Vibrio splendidus 2 2
species Vibrio stylophorae 2
species Vibrio syngnathi 1
species Vibrio taketomensis 17 1
species Vibrio tapetis 1
species Vibrio tarriae 1
species Vibrio tasmaniensis 1 1
species Vibrio toranzoniae 1
species Vibrio tritonius 2 3 2
species Vibrio tubiashii 1 1 1
species Vibrio variabilis 4
species Vibrio vulnificus 6 85 4 1
species Vibrio zhugei 1 1
species Vibrio zhuhaiensis 3
species Vibrio ziniensis 2 2
species Victivallaceae bacterium NML 080035 2
species Victivallales bacterium 3
species Victivallales bacterium CCUG 44730 238 1 1 1 3
species Victivallis lenta 1 3
species Victivallis sp. Marseille-Q1081 3
species Victivallis vadensis 388 103 1 5 2 4 4 2 1
species Virgibacillus byunsanensis 12 2
species Virgibacillus chiguensis 1
species Virgibacillus dokdonensis 1 1
species Virgibacillus halodenitrificans 29 2
species Virgibacillus halotolerans 31
species Virgibacillus kekensis 1
species Virgibacillus natechei 1 2
species Virgibacillus necropolis 25 3 2 1
species Virgibacillus pantothenticus 5 1 2
species Virgibacillus phasianinus 28 2 2
species Virgibacillus salexigens 199 22
species Virgibacillus soli 1
species Virgibacillus sp. 6R 29 1 2
species Virgibacillus sp. Bac330 1 1 1
species Virgibacillus sp. Bac332 21 2 2
species Virgibacillus sp. MSP4-1 80 2
species Virgibacillus sp. NKC19-16 2
species Virgibacillus sp. SK37 18 4 2
species Virgisporangium aurantiacum 1
species Viridibacillus arvi 138
species Viridibacillus neidei 760 24 2
species Viridibacillus sp. JNUCC-6 2
species virus sp. ctLpa4 1
species virus sp. ctmTa7 1
species virus sp. ctrcb4 1
species Vitreoscilla filiformis 22 1
species Vitreoscilla massiliensis 2
species Vitreoscilla sp. C1 1
species Vitreoscilla stercoraria 1 24 1
species Vogesella indigofera 5
species Vogesella lacus 2
species Vogesella perlucida 199
species Vogesella sp. LIG4 61
species Vogesella sp. XCS3 2
species Volucribacter amazonae 64
species Volucribacter psittacicida 13 23
species Volvox carteri 1
species Vreelandella glaciei 1
species Vreelandella hamiltonii 2
species Vreelandella neptunia 14 3
species Vreelandella piezotolerans 17
species Vreelandella profundi 1
species Vreelandella subglaciescola 48 2
species Vreelandella sulfidaeris 2
species Vreelandella titanicae 1 1
species Vulcanibacillus modesticaldus 19 1
species Vulcaniibacterium tengchongense 2
species Vulcaniibacterium thermophilum 10
species Vulcanisaeta distributa 1
species Vulcanisaeta moutnovskia 1 1
species Vulcanisaeta souniana 1
species Vulcanithermus mediatlanticus 18
species Vulgatibacter incomptus 100 2
species Waddlia chondrophila 1 1 1 2
species Wadgaonvirus wv5004651 1
species Wallemia mellicola 1
species Waltera intestinalis 6 4 1
species Waltera sp. CLA-AA-H273 4 1
species Wansuia hejianensis 2 4 3
species Webervirus GHK3 1
species Webervirus KLPN1 1
species Webervirus KOX1 2
species Webervirus KP36 1
species Webervirus KpCol1 1
species Webervirus KpKT21phi1 1
species Webervirus KpV522 1
species Webervirus mezzogao 1
species Webervirus N141 1
species Webervirus NJS1 1
species Webervirus PKP126 1
species Webervirus sin4 1
species Webervirus TAH8 2
species Webervirus TSK1 1
species Webervirus wv1513 1
species Weeksella virosa 7 7 2
species Weissella ceti 30 22 1
species Weissella cibaria 17 1 44 1 1 1 2 2
species Weissella coleopterorum 1
species Weissella confusa 17 22 54 1 2
species Weissella diestrammenae 11 1
species Weissella halotolerans 4 1
species Weissella hanii 21
species Weissella hellenica 25 3 12 1 1
species Weissella jogaejeotgali 1 2 2
species Weissella kandleri 5
species Weissella koreensis 27 8 2 7 1
species Weissella minor 82
species Weissella oryzae 1
species Weissella paramesenteroides 17 14 11 1
species Weissella salipiscis 86
species Weissella soli 97 3 1
species Weissella sp. 3229O2 1
species Weissella sp. F4 2
species Weissella sp. F9 1
species Weissella sp. H1a 2
species Weissella thailandensis 79 69 1
species Weissella uvarum 7
species Weissella viridescens 21 1 1
species Wenyingzhuangia fucanilytica 9 2 2
species Wenyingzhuangia gracilariae 1
species Wenyingzhuangia heitensis 1
species Wenyingzhuangia marina 9
species Wenzhouxiangella limi 1
species Wenzhouxiangella marina 59 20 1 1
species Westerdykella ornata 1
species whitefly endosymbionts 1 1
species Wickerhamomyces anomalus 1
species Wielerella bovis 2
species Wigglesworthia glossinidia 5
species Williamsia marianensis 2
species Williamsoniiplasma luminosum 8 3
species Williamsoniiplasma somnilux 6 1
species Wilmottia murrayi 37
species Winkia neuii 155 322 5 1 1
species Winogradskyella aquimaris 3
species Winogradskyella eckloniae 4
species Winogradskyella exilis 1 1
species Winogradskyella forsetii 1
species Winogradskyella poriferorum 1
species Winogradskyella schleiferi 1
species Winogradskyella sp. HaHa_3_26 1
species Winogradskyella sp. J14-2 4 1 1
species Winogradskyella sp. MH6 1
species Winogradskyella sp. PC-19 1
species Winogradskyella sp. PG-2 4 3 2
species Winogradskyella sp. RHA_55 1
species Winslowiella toletana 71
species Woeseia oceani 3 1
species Wohlfahrtiimonas chitiniclastica 1 1 2
species Wohlfahrtiimonas larvae 2
species Wolbachia endosymbiont of Cimex lectularius 1
species Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis 1
species Wolbachia endosymbiont of Folsomia candida 1
species Wolbachia endosymbiont of Onchocerca volvulus 1
species Wolbachia pipientis 2
species Wolinella succinogenes 1 2
species Woronichinia naegeliana 1
species Wujia chipingensis 2 1 3
species Xanthobacter autotrophicus 2 84 1
species Xanthobacter dioxanivorans 1
species Xanthobacter polyaromaticivorans 5 3
species Xanthobacter sp. YC-JY1 1
species Xanthomonas albilineans 1
species Xanthomonas arboricola 5 2 1
species Xanthomonas axonopodis 1
species Xanthomonas campestris 74 3 2
species Xanthomonas citri 68 1
species Xanthomonas fragariae 1
species Xanthomonas hortorum 25
species Xanthomonas hyacinthi 1
species Xanthomonas oryzae 15 43 14 4 2
species Xanthomonas sacchari 9 8 1
species Xanthomonas translucens 62 1 1
species Xanthomonas vasicola 1
species Xanthomonas vesicatoria 2 2 1
species Xaviernesmea oryzae 1
species Xenophilus aerolatus 1
species Xenophilus azovorans 5
species Xenorhabdus bovienii 14 1 1
species Xenorhabdus budapestensis 2
species Xenorhabdus cabanillasii 6
species Xenorhabdus doucetiae 11 2
species Xenorhabdus hominickii 2 3
species Xenorhabdus indica 61
species Xenorhabdus ishibashii 197
species Xenorhabdus kozodoii 1
species Xenorhabdus magdalenensis 17
species Xenorhabdus nematophila 18 8 12
species Xenorhabdus poinarii 5 1 1
species Xiamenia xianingshaonis 2 2
species Xiashengella succiniciproducens 1 2
species Xylanibacter brevis 2 732 1
species Xylanibacter oryzae 326 2
species Xylanibacter rarus 1
species Xylanibacter ruminicola 6 246 266 20 10 1 3 1
species Xylanimonas allomyrinae 19 1
species Xylanimonas cellulosilytica 11 1 2
species Xylanimonas protaetiae 5 1 1
species Xylella fastidiosa 1 2 1
species Xylophilus ampelinus 4
species Xylophilus rhododendri 80 1
species Yaniella halotolerans 2
species Yanshouia hominis 2
species Yarrowia lipolytica 3 8 8
species Yeguia hominis 4
species Yeosuana aromativorans 1
species Yersinia aldovae 14 3
species Yersinia aleksiciae 4 2 1
species Yersinia alsatica 1
species Yersinia canariae 5
species Yersinia enterocolitica 4 70 2
species Yersinia entomophaga 15
species Yersinia frederiksenii 122 13 2
species Yersinia hibernica 1
species Yersinia intermedia 5 1
species Yersinia kristensenii 6 8
species Yersinia massiliensis 27 1
species Yersinia mollaretii 10 1
species Yersinia nurmii 104
species Yersinia pestis 30 24 1
species Yersinia phage vB_YpM_23 1
species Yersinia pseudotuberculosis 3 15 1 2
species Yersinia rohdei 4 11 1
species Yersinia ruckeri 220 30 21 2 2
species Yersinia similis 19
species Yimella lutea 3
species Yimella sp. cx-51 1
species Yinghuangia sp. ASG 101 2
species Yokenella regensburgei 42 4 8 2
species Yoonia ponticola 8
species Yoonia vestfoldensis 12 1
species Youhaiella tibetensis 1
species Youxingia wuxianensis 4
species Zavarzinella formosa 2
species Zeaxanthinibacter enoshimensis 2
species Zhaonella formicivorans 2
species Zhenpiania hominis 1
species Zhihengliuella salsuginis 14
species Zhihengliuella somnathii 10
species Zhihengliuella sp. ISTPL4 3 1
species Zhongshania aliphaticivorans 1
species Zhouia amylolytica 7
species Zhouia spongiae 2
species Zobellella denitrificans 71 190 1 2 2
species Zobellia galactanivorans 2 19 2 1
species Zobellia laminariae 36 4
species Zoogloea caeni 1
species Zoogloea oryzae 8 2
species Zoogloea ramigera 1
species Zoogloea resiniphila 7 7
species Zoogloea sp. A5 1
species Zoogloeaceae bacteirum Par-f-2 2
species Zooshikella ganghwensis 4
species Zophobihabitans entericus 13 2
species Zunongwangia profunda 18 1 1
species Zunongwangia sp. HGR-M22 1 1
species Zunongwangia sp. SCSIO 43204 2
species Zygosaccharomyces bailii 4
species Zygosaccharomyces rouxii 8
species Zymobacter palmae 72 10
species Zymomonas mobilis 1 133 8 11 2
species Zymoseptoria tritici 8
species group [Pasteurella] aerogenes-[Pasteurella] mairii-[Actinobacillus] rossii complex 1807 7 8 2 3
species group 16SrI (Aster yellows group) 1
species group 16SrII (Peanut WB group) 1
species group 16SrIX (Pigeon pea witches'-broom group) 526 1
species group 16SrV (Elm yellows group) 1 1
species group 16SrVIII (Loofah witches'-broom group) 1
species group 16SrX (Apple proliferation group) 3424 2 1 1
species group 16SrXII (Stolbur group) 6 4
species group 16SrXV (Hibiscus witches'-broom group) 53 1
species group 16SrXXI (Pine shoot proliferation group) 276 1
species group Acinetobacter calcoaceticus/baumannii complex 42 25 4 33 8 5 3 11 1 1
species group Actinopolyspora alba group 4
species group Agrobacterium tumefaciens complex 32 89 1 3 2
species group Amycolatopsis japonica group 7 1
species group Amycolatopsis methanolica group 15 5 2 1
species group Bacillus altitudinis complex 11 25 3 2
species group Bacillus cereus group 30 6 1 87 1 5 14 1 2 1
species group Bacillus subtilis group 595 57 32 91 9 13 2 1
species group belli group 4 1
species group Burkholderia cepacia complex 64 11 61 1 4 2 1
species group canis group 1399 6 2 2 2 1
species group Citrobacter freundii complex 604 16 75 12 11 3 18 9 1 3 2
species group Cryptococcus neoformans species complex 1 8
species group Enterobacter cloacae complex 1238 11 35 93 11 3 3 22 3 1 7 2 3
species group Fusarium fujikuroi species complex 1 8 1
species group Fusarium oxysporum species complex 8 1
species group Fusarium sambucinum species complex 8
species group Geobacillus thermoleovorans group 21 37 1
species group Halopseudomonas pertucinogena group 4
species group Lactobacillus casei group 69 2 89 1 3 1 4 3 1 1
species group Leishmania braziliensis species complex 1
species group Leishmania donovani species complex 1
species group Leishmania guyanensis species complex 1
species group Leishmania major species complex 1
species group Leishmania mexicana species complex 1
species group Leptospirillum sp. Group I 18 2 1
species group Leptospirillum sp. Group II 2
species group Leptospirillum sp. Group III 2
species group Leuconostoc gelidum group 210 5 37 3 3 1 2 1
species group Mycobacterium avium complex (MAC) 10 3 1
species group Mycobacterium simiae complex 3 12 1 1
species group Mycobacterium tuberculosis complex 339 2 3 1
species group Mycobacterium ulcerans group 1
species group Mycoplasma mycoides group 13 3 2 2
species group Paenibacillus sonchi group 1 45 1 2
species group Pantoea agglomerans group 86 32 3 1 2
species group Pediococcus acidilactici group 82 3 1 28 1 1 2 1
species group pseudomallei group 25 20 5 2
species group Pseudomonas aeruginosa group 269 50 12 95 21 3 1 8 3 1 2 1
species group Pseudomonas chlororaphis group 222 17 60 1 5 2
species group Pseudomonas fluorescens group 201 66 1 93 1 5 1 2 1 1
species group Pseudomonas putida group 56 15 2 89 9 24 1 3 1
species group Pseudomonas syringae group 158 17 3 41 4 2 1
species group Rhodococcus erythropolis group 19 1 4 1 1
species group Sinorhizobium fredii group 62 4
species group spotted fever group 953 180 4 1 1
species group Staphylococcus intermedius group 63 48 1 3
species group Stenotrophomonas maltophilia group 16 19 88 4 2 1
species group Streptococcus anginosus group 1129 831 10 95 10 2 7 24 7 1 2 1 2
species group Streptococcus dysgalactiae group 41 83 22 94 1 1 2 2 1 1 2 2 1
species group Streptomyces albidoflavus group 2 1 1
species group Streptomyces aurantiacus group 5 1 2 1
species group Streptomyces griseus group 2 53 31 1 2
species group Streptomyces rochei group 1
species group Streptomyces violaceoruber group 2
species group Streptomyces violaceusniger group 2 3 2
species group Stutzerimonas stutzeri group 47 36 92 1 4 2
species group typhus group 1 4
species group Vibrio harveyi group 1 1 41 1 4 3
species group Vibrio oreintalis group 2 1 1 2
species group Xanthomonas citri group 28 1
species group Yersinia pseudotuberculosis complex 33 14 1 2
species subgroup Bacillus amyloliquefaciens group 221 57 1 62 1 4 2
species subgroup Bacillus mojavensis subgroup 330 10 1 2
species subgroup Pseudomonas nitroreducens/multiresinivorans group 7 1 2 2
species subgroup Pseudomonas oleovorans/pseudoalcaligenes group 9 9 4 3
species subgroup Pseudomonas syringae group genomosp. 1 18 3 40 3 2
species subgroup Pseudomonas syringae group genomosp. 2 5 17 1 3 1
species subgroup Rickettsia sibirica subgroup 2
species subgroup Streptomyces albovinaceus subgroup 8 1
species subgroup Streptomyces atroolivaceus subgroup 1
species subgroup Streptomyces griseus subgroup 42 31 1 2
species subgroup Streptomyces microflavus subgroup 2 4 1
species subgroup Stutzerimonas stutzeri subgroup 40 35 92 1 4 2
species subgroup Vibrio diabolicus subgroup 1
strain [Bacillus] selenitireducens MLS10 17 1
strain [Bacteroides] pectinophilus ATCC 43243 25
strain [Clostridium] aminophilum DSM 10710 5
strain [Clostridium] asparagiforme DSM 15981 2 20 1
strain [Clostridium] cf. saccharolyticum K10 53 1 11 1
strain [Clostridium] citroniae WAL-17108 22
strain [Clostridium] clostridioforme 90A7 9
strain [Clostridium] clostridioforme 90A8 5
strain [Clostridium] clostridioforme AGR2157 4
strain [Clostridium] clostridioforme CM201 3
strain [Clostridium] hylemonae DSM 15053 53 1 2 2
strain [Clostridium] innocuum 2959 16 1
strain [Clostridium] leptum CAG:27 1
strain [Clostridium] leptum DSM 753 1 23
strain [Clostridium] methylpentosum DSM 5476 10
strain [Clostridium] nexile DSM 1787 26 4 23 4
strain [Clostridium] saccharolyticum WM1 1 53 1 4 2
strain [Clostridium] scindens ATCC 35704 53 1 14 1
strain [Clostridium] symbiosum ATCC 14940 3
strain [Clostridium] symbiosum WAL-14163 2 1 14
strain [Clostridium] symbiosum WAL-14673 2
strain [Clostridium] ultunense Esp 36 2
strain [Enterobacter] lignolyticus SCF1 1
strain [Eubacterium] cellulosolvens 6 4 2
strain [Eubacterium] eligens ATCC 27750 53 1 29 2
strain [Eubacterium] siraeum 70/3 53 10 1
strain [Eubacterium] siraeum DSM 15702 1 1
strain [Eubacterium] siraeum V10Sc8a 53 2 8 1
strain [Mannheimia] succiniciproducens MBEL55E 1
strain [Ruminococcus] faecis JCM 15917 5 11
strain [Ruminococcus] lactaris ATCC 29176 10 24 3 2
strain [Ruminococcus] lactaris CC59_002D 22
strain [Ruminococcus] torques ATCC 27756 18 7
strain [Ruminococcus] torques L2-14 53 9 22 1
strain Abiotrophia defectiva ATCC 49176 2
strain Acanthamoeba castellanii str. Neff 1
strain Acaryochloris marina MBIC11017 2
strain Acetivibrio clariflavus DSM 19732 1 47 1 6
strain Acetobacter aceti NBRC 14818 1
strain Acetobacter pasteurianus NBRC 101655 1
strain Acetobacterium woodii DSM 1030 33 1 1
strain Acetohalobium arabaticum DSM 5501 24 3
strain Acetomicrobium mobile DSM 13181 1
strain Achromobacter xylosoxidans A8 2 1
strain Acidaminococcus fermentans DSM 20731 1 53 5
strain Acidaminococcus intestini RyC-MR95 19 2
strain Acidimicrobium ferrooxidans DSM 10331 1
strain Acidiphilium cryptum JF-5 1
strain Acidipropionibacterium acidipropionici ATCC 4875 1
strain Acidithiobacillus caldus ATCC 51756 1
strain Acidithiobacillus ferrivorans SS3 1 1
strain Acidithiobacillus ferrooxidans ATCC 53993 1
strain Acidobacterium capsulatum ATCC 51196 15 3
strain Acidothermus cellulolyticus 11B 3 1
strain Acinetobacter lwoffii WJ10621 1
strain Acinetobacter pittii PHEA-2 2
strain Acinetobacter venetianus VE-C3 1
strain Actinobacillus succinogenes 130Z 6
strain Actinobaculum sp. oral taxon 183 str. F0552 6
strain Actinomyces dentalis DSM 19115 4
strain Actinomyces gerencseriae DSM 6844 3
strain Actinomyces graevenitzii C83 3
strain Actinomyces graevenitzii F0530 11
strain Actinomyces johnsonii F0510 2
strain Actinomyces johnsonii F0542 2
strain Actinomyces massiliensis 4401292 2
strain Actinomyces massiliensis F0489 1
strain Actinomyces naeslundii str. Howell 279 14
strain Actinomyces oris K20 3
strain Actinomyces sp. oral taxon 170 str. F0386 1
strain Actinomyces sp. oral taxon 171 str. F0337 49
strain Actinomyces sp. oral taxon 172 str. F0311 1
strain Actinomyces sp. oral taxon 180 str. F0310 1
strain Actinomyces sp. oral taxon 848 str. F0332 22
strain Actinomyces timonensis DSM 23838 2
strain Actinomyces viscosus C505 6
strain Actinoplanes missouriensis 431 6 1
strain Actinoplanes teichomyceticus ATCC 31121 4 1
strain Adlercreutzia caecimuris B7 11
strain Adlercreutzia equolifaciens DSM 19450 53 1 17 2
strain Adlercreutzia mucosicola DSM 19490 9
strain Advenella kashmirensis WT001 1
strain Advenella mimigardefordensis DPN7 14 2
strain Aequorivita sublithincola DSM 14238 2 1
strain Aerococcus urinae ACS-120-V-Col10a 22 1
strain Aeromicrobium marinum DSM 15272 1
strain Aeromonas caviae Ae398 1
strain Aeromonas hydrophila 4AK4 1
strain Aeromonas salmonicida subsp. pectinolytica 34mel 1
strain Aeromonas salmonicida subsp. salmonicida A449 1
strain Agathobacter rectalis ATCC 33656 2 1
strain Agathobacter rectalis DSM 17629 53 1 24 1
strain Agathobacter rectalis M104/1 53 1 3 1
strain Agathobaculum desmolans ATCC 43058 15
strain Aggregatibacter actinomycetemcomitans NUM4039 1
strain Aggregatibacter aphrophilus ATCC 33389 18
strain Aggregatibacter aphrophilus NJ8700 20
strain Aggregatibacter segnis ATCC 33393 26 1 1
strain Aggregatibacter sp. oral taxon 458 str. W10330 1
strain Agrobacterium fabrum str. C58 1
strain Agrobacterium radiobacter DSM 30147 1
strain Akkermansia muciniphila ATCC BAA-835 3 7
strain Aliarcobacter butzleri 7h1h 1
strain Aliarcobacter butzleri ED-1 1
strain Aliarcobacter cryaerophilus ATCC 43158 1
strain Aliarcobacter cryaerophilus D2610 1
strain Aliarcobacter skirrowii CCUG 10374 1
strain Aliarcobacter thereius LMG 24486 3
strain Aliarcobacter trophiarum LMG 25534 1
strain Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 14
strain Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 21 3
strain Aliivibrio fischeri MJ11 1
strain Aliivibrio fischeri SR5 1
strain Alistipes finegoldii DSM 17242 53 22 23 30
strain Alistipes ihumii AP11 14 10 2
strain Alistipes indistinctus YIT 12060 2 15 1
strain Alistipes onderdonkii WAL 8169 = DSM 19147 20
strain Alistipes putredinis DSM 17216 25
strain Alistipes senegalensis JC50 18
strain Alistipes shahii WAL 8301 52 9 25 29
strain Alistipes timonensis JC136 13
strain Alkalihalobacillus alcalophilus ATCC 27647 = CGMCC 1.3604 1
strain Alkalihalophilus pseudofirmus OF4 19 1
strain Alkalilimnicola ehrlichii MLHE-1 17 1
strain Alkaliphilus metalliredigens QYMF 38 1 3
strain Alkaliphilus oremlandii OhILAs 50 1 2
strain Alloalcanivorax dieselolei B5 3 1
strain Allochromatium vinosum DSM 180 19 1
strain Allocoleopsis franciscana PCC 7113 1
strain Allomeiothermus silvanus DSM 9946 1 2
strain Allomuricauda ruestringensis DSM 13258 2 1
strain Allorhizobium ampelinum S4 3
strain Alloscardovia omnicolens DSM 21503 1
strain Alloscardovia omnicolens F0580 1
strain Alteracholeplasma palmae J233 2
strain Alteromonas macleodii str. 'Black Sea 11' 1
strain Alteromonas mediterranea MED64 1
strain Amedibacillus dolichus DSM 3991 10
strain Aminobacterium colombiense DSM 12261 2 2
strain Aminomonas paucivorans DSM 12260 4
strain Ammonifex degensii KC4 23
strain Amorphoplanes friuliensis DSM 7358 4 1
strain Amphibacillus xylanus NBRC 15112 20 5
strain Amycolatopsis methanolica 239 4 2
strain Anabaena cylindrica PCC 7122 3
strain Anabaenopsis circularis NIES-21 1
strain Anaerobutyricum hallii DSM 3353 27
strain Anaerococcus prevotii DSM 20548 52 4
strain Anaerococcus vaginalis ATCC 51170 6
strain Anaerofustis stercorihominis DSM 17244 7
strain Anaerolinea thermophila UNI-1 12 1 2
strain Anaeromyxobacter dehalogenans 2CP-C 8 1
strain Anaerosporobacter mobilis DSM 15930 1
strain Anaerostipes caccae L1-92 3 1
strain Anaerostipes hadrus ATCC 29173 = JCM 17467 12 1
strain Anaerotignum lactatifermentans DSM 14214 6
strain Anaerotignum propionicum DSM 1682 53 1 5
strain Anaerotruncus colihominis DSM 17241 1 16
strain Anaplasma centrale str. Israel 2
strain Ancylobacter novellus DSM 506 1
strain Anoxybacillus ayderensis G10 1
strain Anoxybacillus flavithermus WK1 1
strain Aquiflexum balticum DSM 16537 5 1
strain Arachnia propionica F0230a 2
strain Arcobacter nitrofigilis DSM 7299 1 2
strain Arcobacter suis CECT 7833 1 3
strain Aromatoleum aromaticum EbN1 11 1
strain Arthrospira platensis C1 1
strain Asaia bogorensis NBRC 16594 3 1
strain Aspergillus clavatus NRRL 1 1
strain Aspergillus fijiensis CBS 313.89 1
strain Aspergillus homomorphus CBS 101889 1
strain Aspergillus uvarum CBS 121591 1
strain Aspergillus wentii DTO 134E9 1
strain Aster yellows witches'-broom phytoplasma AYWB 1
strain Asticcacaulis excentricus CB 48 5
strain Azorhizobium caulinodans ORS 571 11
strain Azospira oryzae PS 3 1
strain Azospirillum lipoferum 4B 2 4
strain Azotobacter chroococcum NCIMB 8003 1
strain Bacillus amyloliquefaciens DSM 7 = ATCC 23350 1
strain Bacillus amyloliquefaciens UMAF6639 1
strain Bacillus amyloliquefaciens XH7 1
strain Bacillus atrophaeus UCMB-5137 1
strain Bacillus cereus AH1271 3
strain Bacillus cereus AH676 1
strain Bacillus cereus ATCC 4342 1
strain Bacillus cereus E33L 1
strain Bacillus cereus F 1
strain Bacillus cereus F65185 1
strain Bacillus cereus FRI-35 2
strain Bacillus cereus m1293 1
strain Bacillus cereus Rock3-44 1
strain Bacillus cereus Rock4-18 1
strain Bacillus cereus Rock4-2 1
strain Bacillus infantis NRRL B-14911 30 1 2
strain Bacillus methanolicus MGA3 13 3
strain Bacillus mycoides KBAB4 1
strain Bacillus pseudomycoides DSM 12442 1
strain Bacillus thuringiensis LM1212 1
strain Bacillus thuringiensis MC28 2 1
strain Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 1
strain Bacillus thuringiensis serovar chinensis CT-43 1
strain Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 1
strain Bacillus thuringiensis serovar pulsiensis BGSC 4CC1 1
strain Bacillus thuringiensis YBT-1518 1
strain Bacteroides acidifaciens JCM 10556 15
strain Bacteroides caccae ATCC 43185 15
strain Bacteroides caccae CL03T12C61 9 2
strain Bacteroides cellulosilyticus CL02T12C19 5
strain Bacteroides cellulosilyticus DSM 14838 6
strain Bacteroides cellulosilyticus WH2 1
strain Bacteroides clarus YIT 12056 17 13
strain Bacteroides coprosuis DSM 18011 4
strain Bacteroides eggerthii 1_2_48FAA 13
strain Bacteroides eggerthii DSM 20697 12 4
strain Bacteroides faecichinchillae JCM 17102 6
strain Bacteroides faecis MAJ27 10 17
strain Bacteroides finegoldii CL09T03C10 3
strain Bacteroides finegoldii DSM 17565 12 20 1
strain Bacteroides fluxus YIT 12057 7
strain Bacteroides fragilis 638R 53 1 5
strain Bacteroides fragilis CL03T12C07 1
strain Bacteroides fragilis HMW 615 1
strain Bacteroides fragilis NCTC 9343 2 4
strain Bacteroides fragilis str. 3397 T10 7
strain Bacteroides fragilis str. 3725 D9 ii 5
strain Bacteroides fragilis str. 3976T8 1
strain Bacteroides fragilis str. 3988T(B)14 2
strain Bacteroides fragilis str. 3998 T(B) 4 1
strain Bacteroides fragilis str. 3-F-2 #6 2
strain Bacteroides fragilis str. I1345 1
strain Bacteroides fragilis YCH46 52 1 1 5
strain Bacteroides gallinarum DSM 18171 = JCM 13658 9
strain Bacteroides helcogenes P 36-108 1 53 1 1 6
strain Bacteroides intestinalis DSM 17393 1 6 10
strain Bacteroides nordii CL02T12C05 2
strain Bacteroides nordii WAL 11050 = JCM 12987 10 3
strain Bacteroides oleiciplenus YIT 12058 8
strain Bacteroides ovatus 3_8_47FAA 2
strain Bacteroides ovatus ATCC 8483 3
strain Bacteroides ovatus CL02T12C04 1 7
strain Bacteroides ovatus CL03T12C18 4
strain Bacteroides ovatus SD CMC 3f 9
strain Bacteroides ovatus str. 3725 D1 iv 1
strain Bacteroides ovatus V975 45 1 4
strain Bacteroides pyogenes JCM 10003 3
strain Bacteroides rodentium JCM 16496 22 20
strain Bacteroides salyersiae CL02T12C01 10
strain Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 2
strain Bacteroides stercorirosoris JCM 17103 6
strain Bacteroides stercoris ATCC 43183 32 1 7 2
strain Bacteroides stercoris CC31F 6
strain Bacteroides thetaiotaomicron dnLKV9 6
strain Bacteroides thetaiotaomicron VPI-5482 53 3 19 4
strain Bacteroides uniformis ATCC 8492 9
strain Bacteroides uniformis CL03T00C23 2
strain Bacteroides uniformis CL03T12C37 5 2
strain Bacteroides uniformis dnLKV2 4
strain Bacteroides uniformis str. 3978 T3 i 2
strain Bacteroides uniformis str. 3978 T3 ii 5
strain Bacteroides xylanisolvens CL03T12C04 11
strain Bacteroides xylanisolvens SD CC 2a 1
strain Bacteroides xylanisolvens XB1A 53 1 11 1
strain Barnesiella intestinihominis YIT 11860 1 11
strain Barnesiella viscericola DSM 18177 53 1 4 5
strain Bartonella birtlesii IBS 325 1
strain Bartonella clarridgeiae 73 1
strain Bartonella grahamii as4aup 2
strain Basilea psittacipulmonis DSM 24701 1
strain Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 1
strain Bdellovibrio bacteriovorus str. Tiberius 1
strain Bdellovibrio bacteriovorus W 1
strain Beauveria bassiana ARSEF 2860 1
strain Beijerinckia indica subsp. indica ATCC 9039 1 1
strain Belliella baltica DSM 15883 2 3
strain Bernardetia litoralis DSM 6794 7 1
strain Beutenbergia cavernae DSM 12333 4 1
strain Bifidobacterium [indicum] DSM 20214 = LMG 11587 3
strain Bifidobacterium actinocoloniiforme DSM 22766 23
strain Bifidobacterium adolescentis ATCC 15703 1 21 2 1
strain Bifidobacterium adolescentis JCM 15918 1704 8
strain Bifidobacterium adolescentis L2-32 2
strain Bifidobacterium angulatum DSM 20098 = JCM 7096 32
strain Bifidobacterium animalis subsp. lactis ATCC 27673 14
strain Bifidobacterium animalis subsp. lactis KLDS2.0603 1 1
strain Bifidobacterium bifidum BGN4 11 1
strain Bifidobacterium bifidum LMG 13195 11 1
strain Bifidobacterium bifidum PRL2010 1 21 1 2
strain Bifidobacterium bifidum S17 5 3 1
strain Bifidobacterium breve 12L 1
strain Bifidobacterium breve 689b 51 1 1
strain Bifidobacterium breve ACS-071-V-Sch8b 18 1
strain Bifidobacterium breve DPC 6330 1
strain Bifidobacterium breve HPH0326 5
strain Bifidobacterium breve JCM 7017 12
strain Bifidobacterium breve JCM 7019 16 1 1
strain Bifidobacterium breve S27 2
strain Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 47 6 10 1
strain Bifidobacterium catenulatum PV20-2 1679 3 33 2 1
strain Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854 24 9 2
strain Bifidobacterium dentium ATCC 27679 2
strain Bifidobacterium longum DJO10A 1 29 1 1 1
strain Bifidobacterium longum NCC2705 24 1 1
strain Bifidobacterium longum subsp. infantis 157F 24 1
strain Bifidobacterium longum subsp. infantis EK3 1
strain Bifidobacterium longum subsp. longum 1-6B 3 2 1
strain Bifidobacterium longum subsp. longum 2-2B 3
strain Bifidobacterium longum subsp. longum ATCC 55813 3
strain Bifidobacterium longum subsp. longum BBMN68 19 2
strain Bifidobacterium longum subsp. longum EK13 1
strain Bifidobacterium longum subsp. longum F8 39 1
strain Bifidobacterium longum subsp. longum GT15 25 2
strain Bifidobacterium longum subsp. longum KACC 91563 24 4
strain Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 43 1 3 3
strain Bifidobacterium pseudocatenulatum IPLA36007 10
strain Bifidobacterium pseudolongum PV8-2 6
strain Bifidobacterium pseudolongum subsp. globosum DSM 20092 11 3
strain Bifidobacterium pullorum subsp. saeculare DSM 6531 = LMG 14934 3
strain Bifidobacterium scardovii JCM 12489 = DSM 13734 50 1 1
strain Bifidobacterium thermophilum RBL67 1
strain Bilophila wadsworthia 3_1_6 9
strain Bilophila wadsworthia ATCC 49260 10
strain Blastococcus saxobsidens DD2 1 1
strain Blastomyces dermatitidis ER-3 1
strain Blastomyces gilchristii SLH14081 1
strain Blattabacterium cuenoti BPAY 1
strain Blattabacterium cuenoti STAT 1
strain Blattabacterium sp. (Blattella germanica) str. Bge 1
strain Blattabacterium sp. (Periplaneta americana) str. BPLAN 1
strain Blautia hansenii DSM 20583 4 8 17 11
strain Blautia hydrogenotrophica DSM 10507 13 1 14
strain Blautia luti DSM 14534 = JCM 17040 6
strain Blautia obeum A2-162 53 1 9 3 1
strain Blautia obeum ATCC 29174 37 1 24 2
strain Blautia producta ATCC 27340 = DSM 2950 53 1 11
strain Blautia schinkii DSM 10518 5
strain Blautia wexlerae DSM 19850 28 2
strain Bordetella parapertussis Bpp5 1
strain Borrelia crocidurae DOU 1
strain Borrelia crocidurae str. Achema 1
strain Borrelia duttonii Ly 1
strain Borrelia hermsii YBT 1
strain Borrelia turcica IST7 1
strain Borreliella valaisiana VS116 1
strain Botrytis cinerea B05.10 1
strain Botrytis cinerea T4 1
strain Brachybacterium faecium DSM 4810 11 1
strain Brachyspira hyodysenteriae ATCC 27164 1
strain Brachyspira hyodysenteriae WA1 1
strain Brachyspira intermedia PWS/A 7 4
strain Brachyspira murdochii DSM 12563 7 2
strain Brachyspira pilosicoli 95/1000 2 1
strain Brachyspira pilosicoli B2904 3 1
strain Brachyspira pilosicoli P43/6/78 2 1
strain Brachyspira pilosicoli SP16 2
strain Brachyspira pilosicoli WesB 5 1
strain Bradyrhizobium elkanii USDA 61 12
strain Bradyrhizobium oligotrophicum S58 1
strain Brenneria nigrifluens DSM 30175 = ATCC 13028 7 1
strain Brevibacillus brevis NBRC 100599 4 1
strain Brevibacillus brevis X23 1
strain Brevibacillus laterosporus DSM 25 1
strain Brevibacterium mcbrellneri ATCC 49030 1
strain Brevibacterium ravenspurgense 5401308 = CCUG 53855 1
strain Brucella abortus 2308 1
strain Brucella anthropi ATCC 49188 2
strain Buchnera aphidicola BCc 1
strain Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) 1
strain Buchnera aphidicola str. APS (Acyrthosiphon pisum) 1
strain Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) 1
strain Buchnera aphidicola str. Ua (Uroleucon ambrosiae) 1
strain Burkholderia cepacia GG4 1
strain Burkholderia gladioli BSR3 1
strain Burkholderia multivorans ATCC 17616 1
strain Burkholderia oklahomensis C6786 1
strain Butyricicoccus pullicaecorum 1.2 17
strain Butyricimonas synergistica DSM 23225 1
strain Butyricimonas virosa DSM 23226 9
strain Butyrivibrio crossotus DSM 2876 1 24
strain Butyrivibrio fibrisolvens 16/4 53 1 1
strain Butyrivibrio proteoclasticus B316 53 9 22
strain Caldalkalibacillus thermarum TA2.A1 1
strain Caldanaerobacter subterraneus subsp. tengcongensis MB4 28 2
strain Caldicellulosiruptor bescii DSM 6725 3
strain Caldicellulosiruptor hydrothermalis 108 2 1
strain Caldicellulosiruptor kronotskyensis 2002 1
strain Caldicellulosiruptor obsidiansis OB47 5 1
strain Caldicellulosiruptor owensensis OL 6 4
strain Caldicellulosiruptor saccharolyticus DSM 8903 2 1
strain Caldilinea aerophila DSM 14535 = NBRC 104270 8 3
strain Caldisericum exile AZM16c01 1 1
strain Calditerrivibrio nitroreducens DSM 19672 1 1
strain Caldithrix abyssi DSM 13497 16 1
strain Caloramator fervidus DSM 5463 1
strain Calothrix brevissima NIES-22 1
strain Calothrix parasitica NIES-267 2
strain Caminibacter mediatlanticus TB-2 2
strain Campylobacter avium LMG 24591 4
strain Campylobacter coli 76339 1
strain Campylobacter coli RM4661 1
strain Campylobacter coli RM5611 2
strain Campylobacter concisus 13826 9 1
strain Campylobacter cuniculorum DSM 23162 = LMG 24588 1 1
strain Campylobacter curvus 525.92 1
strain Campylobacter fetus subsp. venerealis str. 84-112 2
strain Campylobacter hominis ATCC BAA-381 22 1
strain Campylobacter jejuni subsp. jejuni CG8421 4
strain Campylobacter lanienae NCTC 13004 1
strain Campylobacter lari RM16712 3 1
strain Campylobacter lari RM2100 1
strain Campylobacter lari subsp. concheus LMG 11760 1
strain Campylobacter peloridis LMG 23910 1 4
strain Campylobacter sputorum aubsp. sputorum RM3237 1
strain Campylobacter ureolyticus ACS-301-V-Sch3b 7
strain Campylobacter ureolyticus RIGS 9880 29 1
strain Candida dubliniensis CD36 2
strain Candida orthopsilosis Co 90-125 1
strain Candidatus Amoebophilus asiaticus 5a2 1
strain Candidatus Blochmanniella chromaiodes str. 640 1
strain Candidatus Blochmanniella pennsylvanica str. BPEN 1
strain Candidatus Blochmanniella vafra str. BVAF 1
strain Candidatus Carsonella ruddii PV 1
strain Candidatus Cloacimonas acidaminovorans str. Evry 1 2
strain Candidatus Endolissoclinum faulkneri L2 1
strain Candidatus Endolissoclinum faulkneri L5 1
strain Candidatus Forterrea multitransposorum CG_2015-17_Forterrea_25_41 1
strain Candidatus Hepatoplasma crinochetorum Av 1
strain Candidatus Ishikawaella capsulata Mpkobe 1
strain Candidatus Karelsulcia muelleri PSPU 2
strain Candidatus Kinetoplastibacterium desouzaii TCC079E 1
strain Candidatus Kinetoplastibacterium galatii TCC219 1
strain Candidatus Kinetoplastibacterium oncopeltii TCC290E 1
strain Candidatus Liberibacter africanus PTSAPSY 1
strain Candidatus Liberibacter solanacearum CLso-ZC1 1
strain Candidatus Midichloria mitochondrii IricVA 1
strain Candidatus Nucleicultrix amoebiphila FS5 1
strain Candidatus Pelagibacter ubique HTCC1062 1
strain Candidatus Protochlamydia amoebophila UWE25 1
strain Candidatus Puniceispirillum marinum IMCC1322 1
strain Candidatus Sodalis pierantonius str. SOPE 1 1
strain Candidatus Stoquefichus massiliensis AP9 3
strain Candidatus Symbiobacter mobilis CR 5 1
strain Candidatus Uzinura diaspidicola str. ASNER 1
strain Capnocytophaga ochracea DSM 7271 3 1
strain Carboxydothermus hydrogenoformans Z-2901 1 3
strain Carnobacterium maltaromaticum LMA28 1
strain Castellaniella defragrans 65Phen 9 1
strain Catenibacterium mitsuokai DSM 15897 7
strain Catenulispora acidiphila DSM 44928 8 5
strain Catonella morbi ATCC 51271 1
strain Cellulomonas carbonis T26 1
strain Cellulomonas flavigena DSM 20109 2
strain Cellulomonas gilvus ATCC 13127 4
strain Cellulophaga algicola DSM 14237 3
strain Cellulophaga baltica 18 1
strain Cellulophaga baltica NN016038 1
strain Cellulophaga lytica DSM 7489 1
strain Cellulosilyticum lentocellum DSM 5427 28 1 5
strain Cellvibrio japonicus Ueda107 3
strain Chamaesiphon minutus PCC 6605 3
strain Chania multitudinisentens RB-25 3 3
strain Chitinophaga pinensis DSM 2588 35 5
strain Chlamydia felis Fe/C-56 1
strain Chloracidobacterium thermophilum B 2 3
strain Chlorobaculum parvum NCIB 8327 27 1
strain Chlorobaculum tepidum TLS 18 1
strain Chlorobium chlorochromatii CaD3 3
strain Chlorobium limicola DSM 245 9 1
strain Chlorobium phaeobacteroides BS1 1
strain Chlorobium phaeobacteroides DSM 266 2 1
strain Chlorobium phaeovibrioides DSM 265 1
strain Chloroflexus aggregans DSM 9485 2 2
strain Chloroherpeton thalassium ATCC 35110 4
strain Christiangramia flava JLT2011 5 1
strain Christiangramia forsetii KT0803 8
strain Chromohalobacter israelensis DSM 3043 3 1
strain Chroococcidiopsis thermalis PCC 7203 1
strain Chthonomonas calidirosea T49 2 3
strain Citrifermentans bemidjiense Bem 14
strain Citrobacter amalonaticus Y19 3 1
strain Citrobacter freundii str. ballerup 7851/39 1
strain Citrobacter werkmanii NBRC 105721 1
strain Citrobacter youngae ATCC 29220 1
strain Cloacibacillus evryensis DSM 19522 1
strain Clostridioides difficile 2007855 7
strain Clostridioides difficile ATCC 43255 4
strain Clostridioides difficile BI9 7
strain Clostridioides difficile BJ08 40 1
strain Clostridioides difficile F501 15
strain Clostridioides difficile M120 27 1
strain Clostridioides difficile P28 4
strain Clostridioides difficile P29 2
strain Clostridioides difficile P38 1
strain Clostridioides difficile P51 2
strain Clostridioides difficile QCD-23m63 4
strain Clostridioides difficile QCD-37x79 1
strain Clostridioides difficile QCD-63q42 1
strain Clostridioides difficile QCD-76w55 1
strain Clostridium autoethanogenum DSM 10061 13 1 1
strain Clostridium baratii str. Sullivan 30 1 3
strain Clostridium beijerinckii NCIMB 8052 4
strain Clostridium beijerinckii NRRL B-598 1 1 1
strain Clostridium botulinum 202F 7 1 3
strain Clostridium botulinum A str. ATCC 3502 1
strain Clostridium botulinum A3 str. Loch Maree 3
strain Clostridium botulinum B str. Eklund 17B (NRP) 15 1 5
strain Clostridium botulinum B1 3
strain Clostridium botulinum Ba4 str. 657 1
strain Clostridium botulinum BKT015925 36 1 5
strain Clostridium botulinum CDC_1436 1
strain Clostridium botulinum F str. 230613 1
strain Clostridium botulinum H04402 065 1
strain Clostridium butyricum 60E.3 2
strain Clostridium carboxidivorans P7 48 1 5
strain Clostridium celatum DSM 1785 8
strain Clostridium cellulovorans 743B 52 1 5
strain Clostridium ljungdahlii DSM 13528 1
strain Clostridium novyi NT 41 1 6
strain Clostridium paraputrificum AGR2156 4
strain Clostridium pasteurianum BC1 42 1 6
strain Clostridium perfringens ATCC 13124 1
strain Clostridium perfringens F262 1
strain Clostridium perfringens SM101 6 1
strain Clostridium perfringens str. 13 1
strain Clostridium saccharoperbutylacetonicum N1-4 23 1 3
strain Clostridium sp. ASF502 1
strain Clostridium sporogenes ATCC 15579 4
strain Clostridium tetani 12124569 21 1 2
strain Colletotrichum higginsianum IMI 349063 1
strain Collimonas fungivorans Ter331 1 2
strain Collinsella aerofaciens ATCC 25986 53 1 18 2
strain Collinsella intestinalis DSM 13280 2
strain Collinsella stercoris DSM 13279 3
strain Collinsella tanakaei YIT 12063 4 5
strain Colwellia psychrerythraea 34H 4
strain Comamonas terrigena NBRC 13299 16
strain Comamonas testosteroni TK102 1
strain Companilactobacillus alimentarius DSM 20249 1
strain Companilactobacillus farciminis KCTC 3681 = DSM 20184 1
strain Conexibacter woesei DSM 14684 15 3
strain Coniophora puteana RWD-64-598 SS2 1
strain Coprobacter fastidiosus NSB1 = JCM 33896 1 2 7 8
strain Coprococcus catus GD/7 53 1 28 1
strain Coprococcus comes ATCC 27758 1 28
strain Coprococcus eutactus ATCC 27759 14 1
strain Coraliomargarita akajimensis DSM 45221 3 1
strain Corallococcus coralloides DSM 2259 9 1
strain Corallococcus macrosporus DSM 14697 1
strain Coriobacterium glomerans PW2 37 3 3
strain Corynebacterium accolens ATCC 49725 1
strain Corynebacterium amycolatum SK46 2
strain Corynebacterium aquilae DSM 44791 38
strain Corynebacterium argentoratense DSM 44202 27 1
strain Corynebacterium aurimucosum ATCC 700975 48
strain Corynebacterium callunae DSM 20147 29
strain Corynebacterium casei LMG S-19264 40
strain Corynebacterium deserti GIMN1.010 33 1
strain Corynebacterium diphtheriae 31A 11
strain Corynebacterium diphtheriae BH8 1
strain Corynebacterium diphtheriae CDCE 8392 8
strain Corynebacterium diphtheriae HC02 8
strain Corynebacterium diphtheriae HC03 1
strain Corynebacterium diphtheriae HC04 2
strain Corynebacterium diphtheriae INCA 402 12
strain Corynebacterium diphtheriae VA01 2
strain Corynebacterium doosanense CAU 212 = DSM 45436 41
strain Corynebacterium durum F0235 12
strain Corynebacterium efficiens YS-314 41 1
strain Corynebacterium falsenii DSM 44353 44 1 1
strain Corynebacterium frankenforstense DSM 45800 46 1
strain Corynebacterium genitalium ATCC 33030 1
strain Corynebacterium glutamicum R 2
strain Corynebacterium glyciniphilum AJ 3170 24 1
strain Corynebacterium halotolerans YIM 70093 = DSM 44683 40
strain Corynebacterium humireducens NBRC 106098 = DSM 45392 37
strain Corynebacterium jeikeium K411 32
strain Corynebacterium kroppenstedtii DSM 44385 29 1
strain Corynebacterium lactis RW2-5 34 1
strain Corynebacterium marinum DSM 44953 37 1
strain Corynebacterium maris DSM 45190 42 1
strain Corynebacterium nuruki S6-4 32
strain Corynebacterium pseudotuberculosis CIP 52.97 1
strain Corynebacterium ramonii FRC0011 1
strain Corynebacterium resistens DSM 45100 45
strain Corynebacterium sphenisci DSM 44792 29 1
strain Corynebacterium terpenotabidum Y-11 17 1
strain Corynebacterium urealyticum DSM 7111 15
strain Corynebacterium variabile DSM 44702 30 1
strain Corynebacterium vitaeruminis DSM 20294 48 3
strain Crinalium epipsammum PCC 9333 1
strain Croceibacter atlanticus HTCC2559 1 1
strain Cronobacter condimenti 1330 3
strain Cronobacter dublinensis subsp. dublinensis LMG 23823 3 1
strain Cronobacter sakazakii ATCC BAA-894 1
strain Cronobacter turicensis z3032 2 1
strain Cronobacter universalis NCTC 9529 1 1
strain Cryptobacterium curtum DSM 15641 31 1 2
strain Cucurbitaria berberidis CBS 394.84 1
strain Cupriavidus gilardii CR3 1
strain Cupriavidus necator N-1 1
strain Cupriavidus pinatubonensis JMP134 5 1
strain Cutibacterium acnes TypeIA2 P.acn17 1
strain Cutibacterium acnes TypeIA2 P.acn31 1
strain Cutibacterium acnes TypeIA2 P.acn33 1
strain Cutibacterium avidum 44067 46
strain Cyanobacterium aponinum PCC 10605 3
strain Cyanobium gracile PCC 6307 15 1
strain Cyberlindnera jadinii NBRC 0988 4
strain Cyberlindnera jadinii NRRL Y-1542 4
strain Cyclobacterium marinum DSM 745 1
strain Cyphellophora europaea CBS 101466 1
strain Cytobacillus oceanisediminis 2691 4
strain Cytophaga hutchinsonii ATCC 33406 19 1
strain Dactylococcopsis salina PCC 8305 3
strain Dechloromonas aromatica RCB 17
strain Deferribacter desulfuricans SSM1 3 4
strain Dehalobacter restrictus DSM 9455 1
strain Dehalococcoides mccartyi 195 33 1 1
strain Dehalococcoides mccartyi BTF08 1
strain Dehalogenimonas lykanthroporepellens BL-DC-9 6 4
strain Deinococcus deserti VCD115 13 1
strain Deinococcus geothermalis DSM 11300 11
strain Deinococcus gobiensis I-0 10 1
strain Deinococcus maricopensis DSM 21211 8 1
strain Deinococcus peraridilitoris DSM 19664 7 1
strain Deinococcus proteolyticus MRP 39 1
strain Deinococcus wulumuqiensis R12 3
strain Denitrovibrio acetiphilus DSM 12809 10 3
strain Desulfarculus baarsii DSM 2075 29 1
strain Desulfatibacillum alkenivorans AK-01 1
strain Desulfitobacterium dehalogenans ATCC 51507 19
strain Desulfitobacterium dichloroeliminans LMG P-21439 20 1 1
strain Desulfitobacterium hafniense DCB-2 1
strain Desulfitobacterium hafniense Y51 5 3
strain Desulfitobacterium metallireducens DSM 15288 1 23 1 2
strain Desulfobacca acetoxidans DSM 11109 2 1
strain Desulfobacula toluolica Tol2 12 3
strain Desulfobulbus propionicus DSM 2032 34
strain Desulfocapsa sulfexigens DSM 10523 9 1
strain Desulfocurvibacter africanus subsp. africanus str. Walvis Bay 37 1
strain Desulfofarcimen acetoxidans DSM 771 17 4
strain Desulfofundulus kuznetsovii DSM 6115 37
strain Desulfoglaeba alkanexedens ALDC 11
strain Desulfohalobium retbaense DSM 5692 8 3
strain Desulfolutivibrio sulfodismutans DSM 3696 40 1
strain Desulfomicrobium baculatum DSM 4028 39 4
strain Desulfomicrobium orale DSM 12838 42 1
strain Desulfomonile tiedjei DSM 6799 6 1
strain Desulforamulus reducens MI-1 1
strain Desulforamulus ruminis DSM 2154 1 5
strain Desulforapulum autotrophicum HRM2 23 1
strain Desulfoscipio gibsoniae DSM 7213 41 1 1
strain Desulfosporosinus acidiphilus SJ4 33 1 2
strain Desulfosporosinus meridiei DSM 13257 1 12 1 1
strain Desulfosporosinus orientis DSM 765 39 1 4
strain Desulfosporosinus youngiae DSM 17734 1
strain Desulfosudis oleivorans Hxd3 26 4
strain Desulfotalea psychrophila LSv54 1
strain Desulfotomaculum nigrificans CO-1-SRB 36 4
strain Desulfovibrio desulfuricans ATCC 27774 2
strain Desulfovibrio piger ATCC 29098 4 4
strain Desulfurella acetivorans A63 3 1
strain Desulfurispirillum indicum S5 17 1
strain Desulfurivibrio alkaliphilus AHT 2 24 1
strain Desulfurobacterium thermolithotrophum DSM 11699 3 1
strain Dethiobacter alkaliphilus AHT 1 1 2
strain Dialister invisus DSM 15470 9 7
strain Dialister succinatiphilus YIT 11850 2
strain Dickeya chrysanthemi Ech1591 4
strain Dickeya parazeae Ech586 1 1
strain Dickeya zeae EC1 1
strain Dickeya zeae MK19 1
strain Dictyoglomus thermophilum H-6-12 2
strain Dictyoglomus turgidum DSM 6724 1
strain Dictyostelium discoideum AX4 2
strain Dinoroseobacter shibae DFL 12 = DSM 16493 5 1
strain Dokdonella koreensis DS-123 3 1
strain Dokdonia donghaensis DSW-1 1
strain Dolichospermum compactum NIES-806 1
strain Dorea formicigenerans 4_6_53AFAA 2
strain Dorea formicigenerans ATCC 27755 26
strain Dorea longicatena AGR2136 15
strain Dorea longicatena DSM 13814 14
strain Dyadobacter fermentans DSM 18053 29 5
strain Dyella japonica A8 3 1
strain Echinicola vietnamensis DSM 17526 5 4
strain Eggerthella lenta 1_1_60AFAA 12
strain Eggerthella lenta DSM 2243 52 1 15 4
strain Ehrlichia chaffeensis str. Jax 1
strain Ehrlichia ruminantium str. Gardel 1
strain Ehrlichia ruminantium str. Welgevonden 1
strain Elizabethkingia anophelis FMS-007 1
strain Elusimicrobium minutum Pei191 2
strain Emiliania huxleyi CCMP1516 1
strain Empedobacter brevis NBRC 14943 = ATCC 43319 1
strain Emticicia oligotrophica DSM 17448 21 1
strain Endozoicomonas montiporae CL-33 5 1
strain Enorma massiliensis phI 1
strain Ensifer adhaerens OV14 1 1
strain Enterobacter asburiae L1 1
strain Enterobacter asburiae LF7a 1
strain Enterobacter cloacae subsp. cloacae NCTC 9394 1
strain Enterobacter cloacae subsp. cloacae SY-70 1
strain Enterobacter cloacae subsp. dissolvens SDM 1
strain Enterocloster bolteae 90A5 2
strain Enterocloster bolteae 90A9 2
strain Enterocloster bolteae 90B3 2
strain Enterocloster bolteae 90B8 2
strain Enterocloster bolteae ATCC BAA-613 9
strain Enterocloster bolteae CAG:59 1
strain Enterococcus avium ATCC 14025 1
strain Enterococcus canis NBRC 100695 1
strain Enterococcus casseliflavus EC20 6 1
strain Enterococcus faecalis ARO1/DG 1
strain Enterococcus faecalis ATCC 29212 2
strain Enterococcus faecalis D32 1 1
strain Enterococcus faecalis DENG1 1
strain Enterococcus faecalis EnGen0084 1
strain Enterococcus faecalis EnGen0285 1
strain Enterococcus faecalis R712 1
strain Enterococcus faecalis str. Symbioflor 1 1
strain Enterococcus faecalis V583 1
strain Enterococcus faecium ATCC 8459 = NRRL B-2354 1
strain Enterococcus faecium Aus0004 51 1 1 1
strain Enterococcus faecium Aus0085 14 1
strain Enterococcus faecium Com15 4
strain Enterococcus faecium E4453 10
strain Enterococcus faecium NEF1 2
strain Enterococcus hirae ATCC 9790 1
strain Enterococcus mundtii QU 25 1
strain Epichloe festucae Fl1 1
strain Erwinia tasmaniensis Et1/99 1
strain Erythrobacter litoralis HTCC2594 1 1
strain Escherichia coli 042 8
strain Escherichia coli 55989 1
strain Escherichia coli APEC IMT5155 3 3
strain Escherichia coli APEC O2-211 8 1
strain Escherichia coli CFT073 1
strain Escherichia coli D9 4
strain Escherichia coli DORA_A_5_14_21 1
strain Escherichia coli E110019 1
strain Escherichia coli ECC-1470 1
strain Escherichia coli ED1a 3 2
strain Escherichia coli FAP1 1
strain Escherichia coli HS 1
strain Escherichia coli HVH 154 (4-5636698) 1
strain Escherichia coli HVH 175 (4-3405184) 1
strain Escherichia coli IHE3034 8
strain Escherichia coli JJ1886 1
strain Escherichia coli K-12 22 9 26 2
strain Escherichia coli KO11FL 4
strain Escherichia coli LF82 8
strain Escherichia coli M12 9
strain Escherichia coli M8 2 2
strain Escherichia coli MS 107-1 4
strain Escherichia coli MS 115-1 1
strain Escherichia coli Nissle 1917 2
strain Escherichia coli O127:H6 str. E2348/69 2
strain Escherichia coli O139:H28 str. E24377A 5
strain Escherichia coli O15:H11 2
strain Escherichia coli O157:H16 9 1 2
strain Escherichia coli O169:H41 1 2
strain Escherichia coli O174:H46 2
strain Escherichia coli O22:H8 8
strain Escherichia coli O26:NM 2
strain Escherichia coli O55:H7 str. RM12579 1 1
strain Escherichia coli O7:K1 str. CE10 1
strain Escherichia coli O91:H21 2
strain Escherichia coli P12b 1
strain Escherichia coli PCN033 1 9
strain Escherichia coli SE11 8 16
strain Escherichia coli SE15 1 4
strain Escherichia coli STEC_DG131-3 1
strain Escherichia coli UM146 4
strain Escherichia coli UMEA 3271-1 1
strain Escherichia coli UMN026 8
strain Escherichia coli UMNF18 4
strain Escherichia coli VR50 1 9 1
strain Escherichia fergusonii ATCC 35469 1
strain Eubacterium brachy ATCC 33089 5
strain Eubacterium limosum KIST612 5
strain Eubacterium minutum ATCC 700079 47 1 4
strain Eubacterium ramulus ATCC 29099 2 27
strain Eubacterium sulci ATCC 35585 53 1 13 4
strain Eubacterium ventriosum ATCC 27560 26
strain Evansella cellulosilytica DSM 2522 2
strain Exiguobacterium antarcticum B7 2
strain Exiguobacterium sibiricum 255-15 1 1
strain Faecalibacterium cf. prausnitzii KLE1255 13
strain Faecalibacterium prausnitzii L2-6 53 8 4 19
strain Faecalibacterium prausnitzii M21/2 6 2
strain Faecalibacterium prausnitzii SL3/3 53 8 1 15
strain Faecalicoccus pleomorphus DSM 20574 1
strain Faecalitalea cylindroides ATCC 27803 10
strain Faecalitalea cylindroides T2-87 53 7 4
strain Ferrimonas balearica DSM 9799 19 2
strain Fervidobacterium nodosum Rt17-B1 3
strain Fervidobacterium pennivorans DSM 9078 1
strain Fibrella aestuarina BUZ 2 36 3
strain Fibrobacter succinogenes subsp. succinogenes S85 31 1
strain Filifactor alocis ATCC 35896 53 1 3
strain Fimbriimonas ginsengisoli Gsoil 348 10 2
strain Finegoldia magna ATCC 29328 53 3
strain Finegoldia magna ATCC 53516 1
strain Flavobacterium branchiophilum FL-15 1 3
strain Flavobacterium columnare ATCC 49512 1
strain Flavobacterium indicum GPTSA100-9 = DSM 17447 2 1
strain Flavobacterium johnsoniae UW101 1
strain Flavonifractor plautii 1_3_50AFAA 21
strain Flavonifractor plautii ATCC 29863 7
strain Flavonifractor plautii DSM 6740 1
strain Flexistipes sinusarabici DSM 4947 1
strain Fluoribacter dumoffii NY 23 1
strain Fluviicola taffensis DSM 16823 1 1
strain Formosa agariphila KMM 3901 1
strain Francisella persica ATCC VR-331 1
strain Frankia alni ACN14a 4 1
strain Frateuria aurantia DSM 6220 13 1
strain Fructilactobacillus sanfranciscensis TMW 1.1304 1
strain Fructobacillus fructosus KCTC 3544 1
strain Fusarium oxysporum NRRL 32931 1
strain Fusobacterium animalis 21_1A 1
strain Fusobacterium animalis 4_8 1
strain Fusobacterium animalis 7_1 1
strain Fusobacterium gonidiaformans ATCC 25563 23 3
strain Fusobacterium hwasookii ChDC F174 1 1
strain Fusobacterium hwasookii ChDC F206 1
strain Fusobacterium hwasookii ChDC F300 3
strain Fusobacterium mortiferum ATCC 9817 31 4
strain Fusobacterium nucleatum subsp. nucleatum ATCC 23726 3
strain Fusobacterium periodonticum 2_1_31 4
strain Fusobacterium ulcerans ATCC 49185 30 8 23
strain Fusobacterium varium ATCC 27725 1
strain Fusobacterium vincentii 3_1_27 2
strain Fusobacterium vincentii 3_1_36A2 1
strain Gallibacterium anatis UMN179 7 1
strain Gallionella capsiferriformans ES-2 5 1
strain Gardnerella vaginalis 409-05 12 1
strain Gardnerella vaginalis ATCC 14019 3
strain Gardnerella vaginalis HMP9231 7
strain Gemella haemolysans M341 1
strain Gemella sanguinis M325 4
strain Geminocystis herdmanii PCC 6308 1
strain Gemmatimonas aurantiaca T-27 7 1
strain Geobacter metallireducens GS-15 30 2
strain Geodermatophilus obscurus DSM 43160 6 2
strain Geotalea daltonii FRC-32 19 3
strain Geotalea uraniireducens Rf4 27 1
strain Glaciecola nitratireducens FR1064 3
strain Gloeobacter kilaueensis JS1 9 1
strain Gloeobacter violaceus PCC 7421 20 1
strain Gloeomargarita lithophora Alchichica-D10 1
strain Gluconacetobacter diazotrophicus PA1 5 5 1
strain Gluconobacter oxydans 621H 1
strain Gluconobacter oxydans DSM 3504 1
strain Glutamicibacter arilaitensis Re117 9
strain Gordonia polyisoprenivorans VH2 9 1
strain Gordonibacter pamelaeae 7-10-1-b 53 1 23 1
strain Gottschalkia acidurici 9a 39 6
strain Gracilinema caldarium DSM 7334 4 1
strain Granulicatella adiacens ATCC 49175 8
strain Granulicatella elegans ATCC 700633 1
strain Granulicella mallensis MP5ACTX8 8
strain Granulicella tundricola MP5ACTX9 16
strain Granulosicoccus antarcticus IMCC3135 7 1
strain Grosmannia clavigera kw1407 1
strain Gynuella sunshinyii YC6258 1
strain Haemophilus haemolyticus M19107 2
strain Haemophilus influenzae 10810 8 1
strain Haemophilus influenzae PittAA 1
strain Haemophilus parahaemolyticus G321 1
strain Haemophilus parainfluenzae ATCC 33392 12 2 5
strain Haemophilus parainfluenzae HK262 1
strain Haemophilus parainfluenzae T3T1 48 8 2
strain Haemophilus paraphrohaemolyticus HK411 1
strain Haemophilus pittmaniae HK 85 2
strain Haemophilus sputorum CCUG 13788 1
strain Haemophilus sputorum HK 2154 3
strain Hafnia alvei FB1 3
strain Hahella chejuensis KCTC 2396 2 3
strain Halalkalibacterium halodurans C-125 3
strain Halanaerobium praevalens DSM 2228 22 4
strain Haliangium ochraceum DSM 14365 18 3
strain Haliscomenobacter hydrossis DSM 1100 18 3
strain Halobacteroides halobius DSM 5150 10 1
strain Halobiforma lacisalsi AJ5 1
strain Halomicronema hongdechloris C2206 5 3
strain Halomonas elongata DSM 2581 4 1
strain Haloplasma contractile SSD-17B 1
strain Halorhabdus utahensis DSM 12940 2
strain Halorhodospira halophila SL1 7 1
strain Halorubrum lacusprofundi ATCC 49239 1
strain Haloterrigena turkmenica DSM 5511 1
strain Halothermothrix orenii H 168 4 2
strain Halothiobacillus neapolitanus c2 1
strain Helicobacter bizzozeronii CIII-1 1
strain Helicobacter canadensis MIT 98-5491 1
strain Helicobacter cetorum MIT 00-7128 1
strain Helicobacter cetorum MIT 99-5656 1
strain Helicobacter pylori 908 1
strain Helicobacter pylori Lithuania75 1
strain Helicobacter pylori oki112 1
strain Helicobacter pylori oki828 1
strain Helicobacter pylori SouthAfrica20 1
strain Helicobacter pylori v225d 1
strain Heliomicrobium modesticaldum Ice1 1 1
strain Herbaspirillum hiltneri N3 4
strain Heterostelium album PN500 1
strain Heyndrickxia coagulans 2-6 2
strain Hippea maritima DSM 10411 2
strain Histophilus somni 129PT 11 1
strain Histophilus somni 2336 3
strain Hoeflea phototrophica DFL-43 1
strain Holdemanella biformis DSM 3989 2 14
strain Holdemania filiformis DSM 12042 4 21
strain Holdemania massiliensis AP2 1 7
strain Hoylesella buccalis ATCC 35310 2
strain Hoylesella timonensis 4401737 = DSM 22865 = JCM 15640 9 2
strain Hoyosella subflava DQS3-9A1 6
strain Hungatella hathewayi 12489931 3
strain Hungatella hathewayi DSM 13479 13
strain Hungatella hathewayi VE202-04 1
strain Hungatella hathewayi WAL-18680 53 1 2 2
strain Hydrogenobacter thermophilus TK-6 3
strain Hydrogenovibrio crunogenus XCL-2 1
strain Hymenobacter swuensis DY53 22 1
strain Hyphomicrobium denitrificans 1NES1 6 1
strain Hyphomicrobium denitrificans ATCC 51888 6 1
strain Hyphomicrobium nitrativorans NL23 5 1
strain Hyphomonas neptunium ATCC 15444 5
strain Ignavibacterium album JCM 16511 15 1
strain Ilyobacter polytropus DSM 2926 26 5
strain Imtechella halotolerans K1 1
strain Intestinibacter bartlettii DSM 16795 2 20
strain Isoalcanivorax pacificus W11-5 15 1
strain Isoptericola dokdonensis DS-3 3
strain Isoptericola variabilis 225 3
strain Isosphaera pallida ATCC 43644 4
strain Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 2 1
strain Johnsonella ignava ATCC 51276 12
strain Jonquetella anthropi DSM 22815 1
strain Kangiella koreensis DSM 16069 1
strain Kineococcus radiotolerans SRS30216 = ATCC BAA-149 4 1
strain Kitasatospora setae KM-6054 3 3
strain Klebsiella oxytoca G54 1
strain Klebsiella oxytoca KONIH1 2
strain Klebsiella pneumoniae JM45 1
strain Klebsiella pneumoniae KP-1 1
strain Klebsiella pneumoniae subsp. pneumoniae 1084 1
strain Klebsiella pneumoniae subsp. pneumoniae KP5-1 1
strain Klebsiella pneumoniae subsp. pneumoniae KPNIH27 1
strain Klebsiella pneumoniae subsp. pneumoniae LZ 1
strain Klebsiella pneumoniae subsp. pneumoniae MGH 78578 1
strain Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 1
strain Klebsiella quasipneumoniae subsp. similipneumoniae MGH 44 1
strain Klebsiella variicola At-22 1
strain Klebsiella variicola BIDMC 61 1
strain Klebsiella variicola MGH 80 1
strain Komagataeibacter medellinensis NBRC 3288 2
strain Komagataeibacter xylinus E25 2 1
strain Kosakonia cowanii JCM 10956 = DSM 18146 1 1
strain Kosakonia radicincitans DSM 16656 1
strain Kribbella flavida DSM 17836 6 1
strain Kutzneria albida DSM 43870 7 1
strain Kyrpidia tusciae DSM 2912 1
strain Kytococcus sedentarius DSM 20547 15 1
strain Lachnoclostridium phytofermentans ISDg 53 1 6
strain Lachnospira multipara ATCC 19207 11 1 1
strain Lachnospira multipara LB2003 1
strain Lachnospiraceae bacterium oral taxon 082 str. F0431 1
strain Lachnospiraceae oral taxon 107 str. F0167 2
strain Lacrimispora sphenoides JCM 1415 53 1 4
strain Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 8
strain Lacticaseibacillus casei UW4 1
strain Lacticaseibacillus paracasei ATCC 334 7
strain Lacticaseibacillus paracasei N1115 5
strain Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130 5
strain Lacticaseibacillus paracasei subsp. paracasei Lpp120 1
strain Lacticaseibacillus paracasei subsp. paracasei Lpp122 1
strain Lacticaseibacillus rhamnosus CRL1505 1
strain Lacticaseibacillus rhamnosus GG 5 4
strain Lacticaseibacillus rhamnosus HN001 1
strain Lacticaseibacillus rhamnosus Lc 705 1
strain Lactiplantibacillus plantarum UCMA 3037 1
strain Lactiplantibacillus plantarum WCFS1 1
strain Lactobacillus acidophilus La-14 1
strain Lactobacillus amylovorus DSM 20531 1 1
strain Lactobacillus amylovorus GRL 1112 3
strain Lactobacillus amylovorus GRL1118 1
strain Lactobacillus crispatus ST1 5
strain Lactobacillus delbrueckii subsp. bulgaricus 2038 1
strain Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 1 1
strain Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1632 1
strain Lactobacillus delbrueckii subsp. bulgaricus ND02 6 2
strain Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 1
strain Lactobacillus equicursoris 66c 3
strain Lactobacillus gasseri 202-4 1
strain Lactobacillus gasseri ATCC 33323 = JCM 1131 7 1
strain Lactobacillus gasseri DSM 14869 8 1
strain Lactobacillus helveticus CNRZ32 1
strain Lactobacillus helveticus H10 1
strain Lactobacillus helveticus H9 1
strain Lactobacillus jensenii JV-V16 1
strain Lactobacillus johnsonii FI9785 1
strain Lactobacillus johnsonii NCC 533 1
strain Lactobacillus kefiranofaciens ZW3 1
strain Lactobacillus paragasseri JV-V03 2
strain Lactobacillus paragasseri K7 1
strain Lactococcus cremoris subsp. cremoris A76 45 5
strain Lactococcus cremoris subsp. cremoris KW2 10
strain Lactococcus cremoris subsp. cremoris MG1363 4
strain Lactococcus cremoris subsp. cremoris NZ9000 1
strain Lactococcus cremoris subsp. cremoris UC509.9 1 1
strain Lactococcus lactis subsp. lactis CV56 7 1
strain Lactococcus lactis subsp. lactis IO-1 13 2
strain Lactococcus lactis subsp. lactis KF147 1
strain Lactococcus lactis subsp. lactis KLDS 4.0325 21 1
strain Lactococcus lactis subsp. lactis NCDO 2118 1
strain Lactococcus piscium MKFS47 1 3
strain Lancefieldella parvula DNF00906 1
strain Lancefieldella parvula DSM 20469 8 2
strain Laribacter hongkongensis HLHK9 1
strain Latilactobacillus sakei subsp. sakei 23K 2
strain Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 1
strain Latilactobacillus sakei subsp. sakei LS25 1
strain Leadbettera azotonutricia ZAS-9 32 1
strain Leadbetterella byssophila DSM 17132 6 3
strain Legionella fallonii LLAP-10 1 1
strain Legionella oakridgensis ATCC 33761 = DSM 21215 1
strain Leifsonia xyli subsp. cynodontis DSM 46306 1 2
strain Leifsonia xyli subsp. xyli str. CTCB07 3
strain Leishmania braziliensis MHOM/BR/75/M2904 1
strain Leisingera methylohalidivorans DSM 14336 1
strain Lentilactobacillus buchneri subsp. silagei CD034 1
strain Lentilactobacillus otakiensis DSM 19908 = JCM 15040 1
strain Leptospira interrogans serovar Linhai str. 56609 1
strain Leptospirillum ferrooxidans C2-3 2
strain Leptothrix cholodnii SP-6 10
strain Leptotrichia buccalis C-1013-b 3 1
strain Leuconostoc carnosum JB16 2 3
strain Leuconostoc gasicomitatum KG16-1 1 3
strain Leuconostoc gasicomitatum LMG 18811 2
strain Leuconostoc gelidum JB7 6 1 1
strain Leuconostoc gelidum subsp. gelidum KCTC 3527 2
strain Leuconostoc kimchii IMSNU 11154 1
strain Leuconostoc mesenteroides KFRI-MG 1
strain Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 1
strain Levilactobacillus brevis BSO 464 1
strain Leyella stercorea DSM 18206 4 2 2
strain Ligilactobacillus ruminis ATCC 25644 1
strain Ligilactobacillus ruminis ATCC 27782 49 1 5
strain Ligilactobacillus salivarius CECT 5713 1
strain Ligilactobacillus salivarius DSM 20555 = ATCC 11741 3
strain Ligilactobacillus salivarius str. Ren 3 1
strain Ligilactobacillus salivarius UCC118 3
strain Limosilactobacillus fermentum 3872 2
strain Limosilactobacillus mucosae LM1 4
strain Limosilactobacillus reuteri SD2112 1
strain Listeria innocua Clip11262 1
strain Listeria monocytogenes FSL J1-208 1
strain Listeria seeligeri serovar 1/2b str. SLCC3954 1
strain Luteibacter rhizovicinus DSM 16549 10 2
strain Mageeibacillus indolicus UPII9-5 49 1 2
strain Magnetococcus marinus MC-1 10 1
strain Mahella australiensis 50-1 BON 27
strain Malaciobacter molluscorum LMG 25693 2 2
strain Malaciobacter mytili LMG 24559 1 4
strain Malacoplasma penetrans HF-2 3 1
strain Mannheimia varigena USDA-ARS-USMARC-1312 1
strain Maricaulis maris MCS10 1
strain Marichromatium purpuratum 984 10
strain Maridesulfovibrio hydrothermalis AM13 = DSM 14728 13 1
strain Maridesulfovibrio salexigens DSM 2638 44 3
strain Marinithermus hydrothermalis DSM 14884 10
strain Marinobacter nauticus ATCC 49840 1
strain Marinomonas mediterranea MMB-1 1
strain Marinomonas posidonica IVIA-Po-181 1
strain Marinovum algicola DG 898 4 1
strain Marivirga tractuosa DSM 4126 1
strain Martelella mediterranea DSM 17316 6 1
strain Marvinbryantia formatexigens DSM 14469 14 2
strain Mediterraneibacter gnavus AGR2154 4
strain Mediterraneibacter gnavus ATCC 29149 53 20 19 15
strain Mediterraneibacter gnavus CC55_001C 1 4
strain Mediterraneibacter gnavus E1 46 12
strain Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 43 1
strain Megamonas funiformis YIT 11815 1
strain Megamonas hypermegale ART12/1 14
strain Megasphaera elsdenii 14-14 17 1
strain Megasphaera elsdenii DSM 20460 25 3
strain Megasphaera micronuciformis F0359 1
strain Meiothermus ruber DSM 1279 6
strain Meiothermus taiwanensis WR-220 3
strain Melioribacter roseus P3M-2 3 2 4
strain Melittangium boletus DSM 14713 18 1
strain Mesoplasma lactucae ATCC 49193 2 4
strain Mesorhizobium amorphae CCNWGS0123 2 3
strain Mesorhizobium australicum WSM2073 3
strain Mesorhizobium ciceri ca181 1
strain Mesorhizobium loti R88b 1
strain Mesorhizobium opportunistum WSM2075 1
strain Mesotoga prima MesG1.Ag.4.2 1 1
strain Methanobrevibacter ruminantium M1 8 1
strain Methanobrevibacter smithii ATCC 35061 1 2
strain Methanobrevibacter smithii DSM 2375 1
strain Methanococcoides burtonii DSM 6242 1
strain Methanococcus aeolicus Nankai-3 1
strain Methanocorpusculum labreanum Z 4 3
strain Methanolacinia petrolearia DSM 11571 2
strain Methanosarcina acetivorans C2A 4 3
strain Methanosarcina barkeri 3 2
strain Methanosarcina horonobensis HB-1 = JCM 15518 1
strain Methanosarcina lacustris Z-7289 1
strain Methanosphaera stadtmanae DSM 3091 2
strain Methanothermococcus okinawensis IH1 1
strain Methylacidiphilum fumariolicum SolV 1
strain Methylibium petroleiphilum PM1 3 1
strain Methylobacillus flagellatus KT 9
strain Methylobacterium mesophilicum SR1.6/6 8
strain Methylobacterium nodulans ORS 2060 10 1
strain Methylocella silvestris BL2 1
strain Methylococcus capsulatus str. Bath 4
strain Methylogaea oryzae JCM 16910 1 2
strain Methylomonas methanica MC09 4 1
strain Methylorubrum extorquens AM1 4 1
strain Methylorubrum extorquens CM4 5
strain Methylorubrum extorquens PA1 4
strain Methylorubrum populi BJ001 6 1
strain Methylosinus trichosporium OB3b 1 3
strain Methylotenera versatilis 301 1
strain Methylotuvimicrobium alcaliphilum 20Z 1
strain Micavibrio aeruginosavorus ARL-13 2 1
strain Micavibrio aeruginosavorus EPB 1
strain Microbacterium testaceum StLB037 3
strain Microchaete diplosiphon NIES-3275 2
strain Microcystis aeruginosa NIES-843 1
strain Microcystis aeruginosa PCC 7806 1
strain Microcystis panniformis FACHB-1757 1
strain Microlunatus phosphovorus NM-1 7 1
strain Micromonas pusilla CCMP1545 1
strain Micromonospora maris AB-18-032 5 1
strain Mitsuokella jalaludinii DSM 13811 1
strain Mobiluncus curtisii ATCC 43063 40 3
strain Monosiga brevicollis MX1 1
strain Moorena producens JHB 4
strain Moorena producens PAL-8-15-08-1 1
strain Mucilaginibacter paludis DSM 18603 3
strain Musicola paradisiaca Ech703 5
strain Musicola paradisiaca NCPPB 2511 1
strain Mycetohabitans rhizoxinica HKI 454 4
strain Mycobacterium canettii CIPT 140070008 1
strain Mycobacterium canettii CIPT 140070010 1
strain Mycobacterium canettii CIPT 140070017 1 3
strain Mycobacterium colombiense CECT 3035 4 3
strain Mycobacterium haemophilum DSM 44634 3 1
strain Mycobacteroides abscessus subsp. bolletii 50594 1
strain Mycolicibacterium chubuense NBB4 2 1
strain Mycolicibacterium gilvum PYR-GCK 3
strain Mycolicibacterium gilvum Spyr1 1
strain Mycolicibacterium hassiacum DSM 44199 5 1
strain Mycolicibacterium rhodesiae NBB3 3 1
strain Mycolicibacterium vaccae 95051 7 1
strain Mycolicibacterium vanbaalenii PYR-1 3 1
strain Mycoplasma capricolum subsp. capricolum ATCC 27343 1
strain Mycoplasma crocodyli MP145 1
strain Mycoplasma haemocanis str. Illinois 1
strain Mycoplasma haemofelis str. Langford 1 1
strain Mycoplasma leachii 99/014/6 1
strain Mycoplasma mobile 163K 1
strain Mycoplasma mycoides subsp. capri LC str. 95010 1
strain Mycoplasma ovis str. Michigan 1
strain Mycoplasma parvum str. Indiana 1
strain Mycoplasma wenyonii str. Massachusetts 1
strain Mycoplasma yeatsii GM274B 1 1
strain Mycoplasmoides gallisepticum str. R 1
strain Myroides odoratus DSM 2801 1
strain Myxococcus fulvus 124B02 14 1
strain Myxococcus stipitatus DSM 14675 16 1
strain Myxococcus xanthus DK 1622 1
strain Nakamurella multipartita DSM 44233 7 1
strain Natranaerobius thermophilus JW/NM-WN-LF 10 1
strain Natrialba magadii ATCC 43099 1
strain Nautilia profundicola AmH 11 1
strain Negativicoccus succinicivorans DORA_17_25 3
strain Neisseria lactamica 020-06 1
strain Neisseria meningitidis alpha14 1
strain Neisseria sp. oral taxon 014 str. F0314 3
strain Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 3 1
strain Neorhizobium galegae bv. orientalis str. HAMBI 540 1 4
strain Neorickettsia helminthoeca str. Oregon 1
strain Niabella soli DSM 19437 17 3
strain Niastella koreensis GR20-10 22 2
strain Nitratidesulfovibrio vulgaris DP4 13
strain Nitratidesulfovibrio vulgaris str. 'Miyazaki F' 48 1
strain Nitratifractor salsuginis DSM 16511 13
strain Nitrobacter hamburgensis X14 1 1
strain Nitrosococcus halophilus Nc 4 1
strain Nitrosococcus oceani ATCC 19707 1
strain Nitrosococcus watsonii C-113 1
strain Nitrosomonas europaea ATCC 19718 1
strain Nitrosomonas eutropha C91 1
strain Nitrosospira briensis C-128 1
strain Nitrosospira multiformis ATCC 25196 1
strain Nitrospirillum viridazoti CBAmc 15 2
strain Nocardia brasiliensis ATCC 700358 4
strain Nocardia cyriacigeorgica GUH-2 6 3
strain Nocardia farcinica IFM 10152 1
strain Nocardia nova SH22a 9 1
strain Nocardioides dokdonensis FR1436 3 3
strain Nocardiopsis alba ATCC BAA-2165 9 1
strain Nocardiopsis gilva YIM 90087 7 1
strain Nodularia spumigena CCY9414 1
strain Nonlabens dokdonensis DSW-6 1
strain Nonlabens marinus S1-08 1
strain 'Nostoc azollae' 0708 1
strain Nostoc carneum NIES-2107 1
strain Nostoc flagelliforme CCNUN1 1
strain Nostoc linckia NIES-25 1
strain Nostoc punctiforme PCC 73102 1
strain Novacetimonas hansenii ATCC 23769 1
strain Novosphingobium aromaticivorans DSM 12444 4 1
strain Novosphingobium pentaromativorans US6-1 1
strain Oceanithermus profundus DSM 14977 17 1
strain Oceanobacillus iheyensis HTE831 8 1
strain Oceanobacillus kimchii X50 1
strain Oceanobacillus massiliensis str. N'diop 1
strain Octadecabacter antarcticus 307 1
strain Octadecabacter arcticus 238 1
strain Odoribacter laneus YIT 12061 2 2 2 4
strain Odoribacter splanchnicus DSM 20712 18 1 20 4
strain Oenococcus kitaharae DSM 17330 1
strain Oenococcus oeni PSU-1 1
strain Oleidesulfovibrio alaskensis G20 47 4
strain Oleispira antarctica RB-8 1
strain Olsenella uli DSM 7084 48 5 10
strain Onion yellows phytoplasma OY-M 1
strain Opitutus terrae PB90-1 19 1
strain Orientia tsutsugamushi str. Boryong 1
strain Ornithobacterium rhinotracheale ORT-UMN 88 29 1 4
strain Oscillatoria acuminata PCC 6304 3
strain Oscillatoria nigro-viridis PCC 7112 1
strain Oscillibacter ruminantium GH1 2 5
strain Oscillibacter valericigenes Sjm18-20 53 9 3 20
strain Ostreococcus lucimarinus CCE9901 2
strain Owenweeksia hongkongensis DSM 17368 1
strain Oxalobacter formigenes OXCC13 4 1
strain Oxynema aestuarii AP17 2
strain Paenarthrobacter aurescens TC1 1 1
strain Paenibacillus durus ATCC 35681 17 1
strain Paenibacillus mucilaginosus K02 2
strain Paenibacillus mucilaginosus KNP414 1
strain Paenibacillus polymyxa CR1 2
strain Paenibacillus riograndensis SBR5 26 1
strain Paenibacillus sabinae T27 29 1
strain Paenibacillus terrae HPL-003 25 1 1
strain Paenibacillus uliginis N3/975 27 1
strain Palaeococcus pacificus DY20341 1
strain Paludibacter propionicigenes WB4 47 1 5
strain Pannonibacter phragmitetus BB 1
strain Pantoea stewartii subsp. stewartii DC283 1
strain Pantoea vagans C9-1 1
strain Parabacteroides distasonis ATCC 8503 53 1 7 6
strain Parabacteroides distasonis CL03T12C09 3 1
strain Parabacteroides distasonis CL09T03C24 7
strain Parabacteroides distasonis str. 3776 D15 iv 1
strain Parabacteroides distasonis str. 3999B T(B) 4 3
strain Parabacteroides distasonis str. 3999B T(B) 6 1
strain Parabacteroides goldsteinii CL02T12C30 4
strain Parabacteroides goldsteinii DSM 19448 = WAL 12034 6
strain Parabacteroides johnsonii CL02T12C29 1 1
strain Parabacteroides johnsonii DSM 18315 10 13
strain Parabacteroides merdae ATCC 43184 12 1
strain Parabacteroides merdae CL03T12C32 8
strain Parabacteroides merdae CL09T00C40 1 2
strain Paraburkholderia phenoliruptrix BR3459a 10 1
strain Paraburkholderia phymatum STM815 5 1
strain Paraburkholderia phytofirmans OLGA172 8
strain Paraburkholderia phytofirmans PsJN 2 1
strain Paraburkholderia sprentiae WSM5005 6 1
strain Paraburkholderia xenovorans LB400 1
strain Parachlamydia acanthamoebae UV-7 1
strain Paracoccus aminophilus JCM 7686 3 1
strain Paraglaciecola psychrophila 170 1
strain Paramagnetospirillum magneticum AMB-1 11 1
strain Paramecium tetraurelia strain d4-2 1
strain Paraprevotella clara YIT 11840 8
strain Paraprevotella xylaniphila YIT 11841 53 1 7 6
strain Pararhodospirillum photometricum DSM 122 17 1
strain Parascardovia denticolens DSM 10105 = JCM 12538 38 1
strain Parasphaerochaeta coccoides DSM 17374 15 1
strain Parasutterella excrementihominis YIT 11859 22
strain Parvibaculum lavamentivorans DS-1 3
strain Parvimonas micra ATCC 33270 2
strain Parvularcula bermudensis HTCC2503 1
strain Pasteurella multocida subsp. multocida OH4807 10 4
strain Pasteurella multocida subsp. multocida P1062 1
strain Paucilactobacillus hokkaidonensis JCM 18461 2 2
strain Paucilactobacillus oligofermentans DSM 15707 = LMG 22743 1
strain Pectobacterium atrosepticum SCRI1043 1
strain Pectobacterium carotovorum subsp. carotovorum PC1 1 3
strain Pediococcus acidilactici 7_4 1
strain Pedobacter heparinus DSM 2366 12 1 5
strain Pelobacter propionicus DSM 2379 25 1
strain Pelodictyon luteolum DSM 273 13 1
strain Pelodictyon phaeoclathratiforme BU-1 1
strain Pelosinus fermentans JBW45 34 4
strain Pelotomaculum thermopropionicum SI 31
strain Penicillium rubens Wisconsin 54-1255 1
strain Peptoclostridium acidaminophilum DSM 3953 50 2
strain Peptoniphilus lacrimalis DNF00528 2
strain Peptostreptococcus anaerobius CC14N 4
strain Peptostreptococcus anaerobius VPI 4330 = DSM 2949 1
strain Peribacillus simplex NBRC 15720 = DSM 1321 1 1
strain Persephonella marina EX-H1 1
strain Petrotoga mobilis SJ95 1
strain Phascolarctobacterium succinatutens CAG:287 2
strain Phascolarctobacterium succinatutens YIT 12067 2 1 4
strain Phenylobacterium zucineum HLK1 3 3
strain Phocaeicola barnesiae DSM 18169 = JCM 13652 3
strain Phocaeicola coprocola DSM 17136 5
strain Phocaeicola coprophilus DSM 18228 = JCM 13818 5
strain Phocaeicola dorei 5_1_36/D4 3
strain Phocaeicola dorei CL02T12C06 2
strain Phocaeicola dorei CL03T12C01 53 1 6 6
strain Phocaeicola dorei DSM 17855 1
strain Phocaeicola massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 15 19
strain Phocaeicola paurosaccharolyticus JCM 15092 1 2
strain Phocaeicola plebeius DSM 17135 6
strain Phocaeicola salanitronis DSM 18170 53 1 3 6
strain Phocaeicola sartorii JCM 16497 12
strain Phocaeicola sartorii JCM 17136 = DSM 21941 4
strain Phocaeicola vulgatus ATCC 8482 1 53 6 6 5 5
strain Phocaeicola vulgatus PC510 9
strain Phocaeicola vulgatus str. 3775 SL(B) 10 (iv) 3
strain Phocaeicola vulgatus str. 3775 SR(B) 19 2
strain Phocaeicola vulgatus str. 3975 RP4 9
strain Photobacterium gaetbulicola Gung47 5 2
strain Photobacterium profundum SS9 10 1
strain Phycisphaera mikurensis NBRC 102666 19 1
strain Phycomyces blakesleeanus NRRL 1555(-) 1
strain Pirellula staleyi DSM 6068 1
strain Planctopirus limnophila DSM 3776 1
strain Planktothrix agardhii NIVA-CYA 126/8 3
strain Planococcus antarcticus DSM 14505 4 4
strain Plenodomus lingam JN3 1
strain Polaromonas naphthalenivorans CJ2 8 2
strain Polymorphum gilvum SL003B-26A1 1 3
strain Polynucleobacter asymbioticus QLW-P1DMWA-1 1
strain Polynucleobacter necessarius STIR1 1
strain Porphyromonas asaccharolytica DSM 20707 52 1 1 5
strain Porphyromonas asaccharolytica PR426713P-I 2
strain Porphyromonas gingivalis A7A1-28 7
strain Porphyromonas gingivalis AJW4 10
strain Porphyromonas levii DSM 23370 1
strain Porphyromonas somerae DSM 23386 4 3
strain Porphyromonas uenonis DSM 23387 = JCM 13868 2
strain Prevotella bivia DNF00650 1
strain Prevotella bivia DSM 20514 14
strain Prevotella corporis DSM 18810 = JCM 8529 2
strain Prevotella dentalis DSM 3688 53 1 5
strain Prevotella denticola F0289 52 2
strain Prevotella disiens FB035-09AN 1
strain Prevotella fusca JCM 17724 53 20 10
strain Prevotella intermedia ATCC 25611 = DSM 20706 48 2
strain Prevotella nigrescens F0103 1
strain Prevotella scopos JCM 17725 52 1 3
strain Prevotella sp. oral taxon 299 str. F0039 53 5
strain Priestia megaterium DSM 319 1
strain Priestia megaterium NBRC 15308 = ATCC 14581 1
strain Priestia megaterium NCT-2 1
strain Priestia megaterium Q3 1
strain Priestia megaterium WSH-002 1
strain Prochlorococcus marinus str. MIT 9211 1
strain Prochlorococcus marinus str. MIT 9215 1
strain Prochlorococcus marinus str. MIT 9301 1
strain Prochlorococcus marinus str. MIT 9312 1
strain Prochlorococcus marinus str. MIT 9313 1
strain Prochlorococcus marinus str. MIT 9515 1 1
strain Prochlorococcus marinus str. NATL1A 1
strain Prochlorococcus marinus str. NATL2A 1
strain Prochlorococcus marinus subsp. marinus str. CCMP1375 3
strain Prochlorococcus marinus subsp. pastoris str. CCMP1986 4
strain Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 3
strain Prosthecochloris aestuarii DSM 271 3 3
strain Providencia rettgeri DSM 1131 4
strain Providencia rustigianii DSM 4541 4
strain Providencia sneebia DSM 19967 1
strain Providencia stuartii ATCC 25827 4
strain Providencia stuartii MRSN 2154 1
strain Pseudarthrobacter chlorophenolicus A6 7
strain Pseudarthrobacter phenanthrenivorans Sphe3 12 1
strain Pseudoalteromonas arctica A 37-1-2 3
strain Pseudoalteromonas atlantica T6c 1
strain Pseudoalteromonas espejiana DSM 9414 1
strain Pseudoalteromonas spongiae UST010723-006 3
strain Pseudoalteromonas translucida KMM 520 1
strain Pseudobutyrivibrio ruminis CF1b 1
strain Pseudodesulfovibrio aespoeensis Aspo-2 39 3
strain Pseudodesulfovibrio piezophilus C1TLV30 10 1
strain Pseudoflavonifractor capillosus ATCC 29799 8 25
strain Pseudomonas [fluorescens] SBW25 2
strain Pseudomonas amygdali pv. lachrymans str. M301315 1
strain Pseudomonas cichorii JBC1 2 1
strain Pseudomonas fluorescens A506 1
strain Pseudomonas fluorescens NCIMB 11764 1 1
strain Pseudomonas fluorescens Pf0-1 1
strain Pseudomonas fluorescens Pf29Arp 1
strain Pseudomonas fluorescens Q2-87 1
strain Pseudomonas fluorescens R124 1
strain Pseudomonas fluorescens WH6 1
strain Pseudomonas fragi B25 1
strain Pseudomonas fulva 12-X 1
strain Pseudomonas knackmussii B13 1
strain Pseudomonas mendocina S5.2 1
strain Pseudomonas mendocina ymp 3
strain Pseudomonas moraviensis R28-S 1
strain Pseudomonas putida ND6 1
strain Pseudomonas putida S13.1.2 1
strain Pseudomonas putida W619 1
strain Pseudomonas resinovorans NBRC 106553 7 1
strain Pseudomonas syringae CC1557 1 1
strain Pseudomonas syringae pv. maculicola str. ES4326 2
strain Pseudomonas syringae pv. pisi str. PP1 2
strain Pseudomonas syringae pv. syringae SM 1
strain Pseudonocardia dioxanivorans CB1190 3 1
strain Pseudopedobacter saltans DSM 12145 20 2 2
strain Pseudothermotoga hypogea DSM 11164 = NBRC 106472 1
strain Pseudothermotoga lettingae TMO 1
strain Pseudothermotoga thermarum DSM 5069 3
strain Pseudoxanthomonas spadix BD-a59 2 3
strain Pseudoxanthomonas suwonensis 11-1 3 1
strain Pseudozyma hubeiensis SY62 1
strain Psychrobacter arcticus 273-4 1
strain Psychroflexus torquis ATCC 700755 3
strain Psychromonas ingrahamii 37 4
strain Punctularia strigosozonata HHB-11173 SS5 1
strain Pyramidobacter piscolens W5455 3
strain Rahnella aquatilis CIP 78.65 = ATCC 33071 3
strain Ralstonia pickettii 12D 7
strain Ralstonia pickettii DTP0602 3
strain Ralstonia solanacearum CMR15 1
strain Ramlibacter tataouinensis TTB310 15
strain Raoultella ornithinolytica B6 1
strain Raphidiopsis curvata NIES-932 1 3
strain Rathayibacter festucae DSM 15932 1
strain Rhizobium etli 8C-3 1
strain Rhizobium gallicum bv. gallicum R602sp 1
strain Rhizobium leguminosarum bv. trifolii CB782 1
strain Rhizobium leguminosarum bv. trifolii WSM1325 3
strain Rhizobium leguminosarum bv. trifolii WSM1689 1
strain Rhizobium leguminosarum bv. trifolii WSM2304 1
strain Rhizobium rhizogenes K84 7 1
strain Rhizobium tropici CIAT 899 1 1
strain Rhizorhabdus wittichii DC-6 1
strain Rhodobacter capsulatus SB 1003 8 1
strain Rhodococcoides fascians A21d2 2
strain Rhodococcoides fascians A25f 2
strain Rhodococcoides fascians D188 3
strain Rhodococcus erythropolis R138 1
strain Rhodococcus jostii RHA1 3
strain Rhodococcus opacus B4 3 1
strain Rhodococcus opacus PD630 1 1
strain Rhodoferax ferrireducens T118 11
strain Rhodomicrobium vannielii ATCC 17100 6 1
strain Rhodopirellula baltica SH 1 1
strain Rhodopseudomonas palustris BisA53 1
strain Rhodopseudomonas palustris BisB18 3 1
strain Rhodopseudomonas palustris BisB5 1
strain Rhodopseudomonas palustris CGA009 3
strain Rhodopseudomonas palustris DX-1 1
strain Rhodopseudomonas palustris HaA2 1
strain Rhodopseudomonas palustris TIE-1 1
strain Rhodospirillum centenum SW 8 3
strain Rhodothermus marinus DSM 4252 2 2
strain Rhodothermus marinus SG0.5JP17-172 5 1
strain Rickettsia akari str. Hartford 1
strain Rickettsia australis str. Cutlack 1
strain Rickettsia bellii OSU 85-389 1
strain Rickettsia felis URRWXCal2 1
strain Rickettsia massiliae MTU5 1
strain Rickettsia rhipicephali str. 3-7-female6-CWPP 1
strain Riemerella anatipestifer RA-CH-1 1
strain Rikenella microfusus DSM 15922 5
strain Robiginitalea biformata HTCC2501 21 1
strain Roseburia faecis M72/1 2
strain Roseburia hominis A2-183 2 26 4
strain Roseburia intestinalis L1-82 53 1 11 6
strain Roseburia intestinalis M50/1 53 1 8 1
strain Roseburia intestinalis XB6B4 53 1 8 1
strain Roseburia inulinivorans DSM 16841 49 1 26 1
strain Roseibacterium elongatum DSM 19469 1
strain Roseibium alexandrii DFL-11 1
strain Roseiflexus castenholzii DSM 13941 16
strain Roseobacter litoralis Och 149 1
strain Rothia dentocariosa ATCC 17931 38 2 1
strain Rothia dentocariosa M567 2
strain Rothia mucilaginosa ATCC 25296 3
strain Rothia mucilaginosa DY-18 51 1 5
strain Rothia mucilaginosa M508 2
strain Rubrivivax gelatinosus IL144 20 1
strain Rubrobacter xylanophilus DSM 9941 7 1
strain Ruegeria pomeroyi DSS-3 1
strain Ruminiclostridium cellulolyticum H10 51 1 5
strain Ruminiclostridium papyrosolvens DSM 2782 1
strain Ruminococcus albus 7 = DSM 20455 49 6
strain Ruminococcus albus 8 1
strain Ruminococcus bromii L2-63 18
strain Ruminococcus callidus ATCC 27760 8
strain Ruminococcus champanellensis 18P13 = JCM 17042 53 2 11 5
strain Ruminococcus flavefaciens FD-1 1 4
strain Ruminococcus gauvreauii DSM 19829 6
strain Runella slithyformis DSM 19594 17
strain Saccharomonospora glauca K62 1
strain Saccharomonospora marina XMU15 1
strain Saccharomonospora viridis DSM 43017 4 2
strain Saccharopolyspora erythraea NRRL 2338 4 1
strain Saccharothrix espanaensis DSM 44229 2 1
strain Salinispora arenicola CNS-205 2 1
strain Salinispora tropica CNB-440 5 1
strain Salmonella bongori N268-08 1
strain Salmonella enterica subsp. enterica serovar Antsalova str. S01-0511 3
strain Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 15
strain Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1900 1
strain Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791 1
strain Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K 3
strain Sanguibacter keddieii DSM 10542 6 1
strain Saprospira grandis str. Lewin 2 1
strain Scardovia inopinata JCM 12537 19 1
strain Schaalia cardiffensis F0333 30
strain Schaalia dentiphila ATCC 17982 1 5
strain Schaalia odontolytica F0309 1
strain Schaalia turicensis ACS-279-V-Col4 2
strain Sebaldella termitidis ATCC 33386 37 4
strain Sediminispirochaeta smaragdinae DSM 11293 14 1
strain Segatella buccae ATCC 33574 5
strain Segatella copri DSM 18205 7 3 2
strain Segniliparus rotundus DSM 44985 3 1
strain Selenomonas ruminantium subsp. lactilytica TAM6421 53 4
strain Selenomonas sputigena ATCC 35185 52 2
strain Senegalimassilia anaerobia JC110 2 3 10
strain Serinicoccus marinus DSM 15273 5
strain Serratia inhibens PRI-2C 1
strain Serratia liquefaciens ATCC 27592 1
strain Serratia plymuthica 4Rx13 1
strain Shewanella amazonensis SB2B 1
strain Shewanella denitrificans OS217 1
strain Shewanella frigidimarina NCIMB 400 2
strain Shewanella halifaxensis HAW-EB4 1
strain Shewanella loihica PV-4 2 1
strain Shewanella pealeana ATCC 700345 2 1
strain Shewanella piezotolerans WP3 1
strain Shewanella putrefaciens 200 1
strain Shewanella sediminis HAW-EB3 1
strain Shewanella violacea DSS12 3
strain Shewanella woodyi ATCC 51908 3
strain Shigella boydii ATCC 9905 1
strain Shigella flexneri 1235-66 1
strain Shigella sonnei Ss046 1
strain Shouchella clausii KSM-K16 1
strain Shouchella lehensis G1 1 2
strain Siansivirga zeaxanthinifaciens CC-SAMT-1 4 3
strain Sideroxydans lithotrophicus ES-1 7 1
strain Simiduia agarivorans SA1 = DSM 21679 3 1
strain Simkania negevensis Z 1
strain Simonsiella muelleri ATCC 29453 3 3
strain Singulisphaera acidiphila DSM 18658 12 3
strain Sinorhizobium americanum CCGM7 1
strain Sinorhizobium fredii CCBAU 45436 1
strain Sinorhizobium fredii NGR234 1 1
strain Sinorhizobium fredii USDA 257 3 1
strain Sinorhizobium medicae WSM419 3
strain Sinorhizobium sojae CCBAU 05684 1
strain Slackia piriformis YIT 12062 3
strain Snodgrassella alvi wkB2 8 1
strain Sodalis glossinidius str. 'morsitans' 2 4
strain Sodiomyces alkalinus F11 1
strain Solibacillus silvestris StLB046 1 4
strain Solidesulfovibrio magneticus RS-1 38 1
strain Solitalea canadensis DSM 3403 12 2
strain Solobacterium moorei F0204 3
strain Sorangium cellulosum So ce56 2 1
strain Sorangium cellulosum So0157-2 1
strain Sordaria macrospora k-hell 2
strain Spathaspora passalidarum NRRL Y-27907 1
strain Sphaerobacter thermophilus DSM 20745 20
strain Sphaerochaeta globosa str. Buddy 35 1
strain Sphaerochaeta pleomorpha str. Grapes 22 1
strain Sphaerospermopsis kisseleviana NIES-73 1
strain Sphingobium chlorophenolicum L-1 1
strain Sphingomonas melonis TY 4
strain Sphingomonas sanxanigenens DSM 19645 = NX02 2
strain Sphingopyxis alaskensis RB2256 2 1
strain Spiribacter salinus M19-40 2 2 1
strain Spirochaeta africana DSM 8902 15 1
strain Spirochaeta thermophila DSM 6192 3
strain Spirochaeta thermophila DSM 6578 1
strain Spiroplasma apis B31 1 3
strain Spiroplasma chrysopicola DF-1 2
strain Spiroplasma culicicola AES-1 1
strain Spiroplasma diminutum CUAS-1 1 2
strain Spiroplasma floricola 23-6 1
strain Spiroplasma kunkelii CR2-3x 1
strain Spiroplasma monobiae MQ-1 1
strain Spiroplasma phoeniceum P40 1
strain Spiroplasma sabaudiense Ar-1343 2
strain Spiroplasma syrphidicola EA-1 1
strain Spiroplasma taiwanense CT-1 1 1
strain Spirosoma linguale DSM 74 11
strain Stackebrandtia nassauensis DSM 44728 9 1
strain Stanieria cyanosphaera PCC 7437 1
strain Staphylococcus aureus SK6575 1
strain Staphylococcus capitis CR01 6
strain Staphylococcus epidermidis ATCC 12228 5
strain Staphylococcus epidermidis PM221 3 1
strain Staphylococcus haemolyticus JCSC1435 8
strain Staphylococcus pasteuri SP1 1
strain Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 2
strain Stereum hirsutum FP-91666 SS1 1
strain Stigmatella aurantiaca DW4/3-1 11 1
strain Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 1
strain Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 2
strain Streptococcus agalactiae 18RS21 4
strain Streptococcus agalactiae ILRI112 20
strain Streptococcus agalactiae MRI Z1-039 3
strain Streptococcus anginosus C1051 13
strain Streptococcus anginosus C238 29 1
strain Streptococcus anginosus DORA_7 2
strain Streptococcus anginosus F0211 1
strain Streptococcus anginosus subsp. whileyi MAS624 19 1
strain Streptococcus anginosus T5 2
strain Streptococcus australis ATCC 700641 11
strain Streptococcus cristatus ATCC 51100 46 1 1
strain Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 1
strain Streptococcus dysgalactiae subsp. equisimilis AC-2713 1
strain Streptococcus dysgalactiae subsp. equisimilis RE378 16
strain Streptococcus equi subsp. zooepidemicus ATCC 35246 1
strain Streptococcus equi subsp. zooepidemicus BHS5 1
strain Streptococcus equinus JB1 1
strain Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 1
strain Streptococcus gallolyticus UCN34 1
strain Streptococcus gordonii str. Challis 2
strain Streptococcus infantarius subsp. infantarius ATCC BAA-102 1
strain Streptococcus infantarius subsp. infantarius CJ18 5 1
strain Streptococcus infantis ATCC 700779 3
strain Streptococcus infantis SK1302 1
strain Streptococcus infantis SPAR10 1
strain Streptococcus intermedius B196 34 1
strain Streptococcus intermedius C270 14
strain Streptococcus intermedius F0395 2
strain Streptococcus lutetiensis 033 2 1
strain Streptococcus macedonicus ACA-DC 198 3 1
strain Streptococcus mitis 21/39 2
strain Streptococcus mitis 29/42 1
strain Streptococcus mitis B6 46
strain Streptococcus mitis SK1073 1
strain Streptococcus mitis SK569 1
strain Streptococcus mutans GS-5 1
strain Streptococcus mutans LJ23 1 1
strain Streptococcus mutans NLML5 1
strain Streptococcus oralis ATCC 35037 34 1
strain Streptococcus oralis subsp. dentisani 7746 1
strain Streptococcus oralis Uo5 39 1
strain Streptococcus parasanguinis ATCC 15912 53 1 3 2
strain Streptococcus parasanguinis ATCC 903 2
strain Streptococcus parasanguinis CC87K 6
strain Streptococcus parasanguinis DORA_23_24 1
strain Streptococcus parasanguinis F0405 2
strain Streptococcus parasanguinis F0449 1
strain Streptococcus parasanguinis FW213 49 1 2
strain Streptococcus parasanguinis SK236 1
strain Streptococcus parauberis KRS-02109 1
strain Streptococcus pasteurianus ATCC 43144 43 1 1
strain Streptococcus pneumoniae AP200 15
strain Streptococcus pneumoniae CGSP14 2
strain Streptococcus pneumoniae G54 1
strain Streptococcus pneumoniae Hungary19A-6 2
strain Streptococcus pneumoniae INV200 1
strain Streptococcus pneumoniae JJA 1
strain Streptococcus pneumoniae SPNA45 2
strain Streptococcus pneumoniae ST556 2
strain Streptococcus pseudopneumoniae IS7493 45 1 1
strain Streptococcus pseudoporcinus LQ 940-04 1
strain Streptococcus pyogenes MGAS10750 27
strain Streptococcus pyogenes MGAS2096 43 1 1
strain Streptococcus salivarius 57.I 38 1 3 1
strain Streptococcus salivarius CCHSS3 35 1 5 2
strain Streptococcus salivarius JIM8777 43 1 3 2
strain Streptococcus salivarius K12 4
strain Streptococcus salivarius M18 5
strain Streptococcus sanguinis SK353 1
strain Streptococcus sanguinis SK36 41 1 1 3
strain Streptococcus sanguinis SK405 1
strain Streptococcus sanguinis SK408 1
strain Streptococcus sanguinis SK678 1
strain Streptococcus sobrinus W1703 1
strain Streptococcus suis BM407 9 1
strain Streptococcus suis D12 1
strain Streptococcus suis GZ1 36 1 8 4
strain Streptococcus suis T15 8 1
strain Streptococcus thermophilus ASCC 1275 1
strain Streptococcus thermophilus CNRZ1066 1
strain Streptococcus thermophilus JIM 8232 25 1
strain Streptococcus thermophilus LMD-9 14 4
strain Streptococcus thermophilus LMG 18311 6
strain Streptococcus thermophilus M17PTZA496 1
strain Streptococcus thermophilus MN-ZLW-002 1
strain Streptococcus thermophilus MTH17CL396 1
strain Streptococcus thermophilus ND03 1
strain Streptococcus thermophilus TH1436 1
strain Streptococcus thermophilus TH982 1
strain Streptococcus thermophilus TH985 1
strain Streptococcus vestibularis ATCC 49124 1 5
strain Streptococcus vestibularis F0396 4
strain Streptomyces bingchenggensis BCW-1 5 1
strain Streptomyces chartreusis NRRL 3882 3
strain Streptomyces collinus Tu 365 1
strain Streptomyces davaonensis JCM 4913 1 1
strain Streptomyces griseus subsp. griseus NBRC 13350 2 1
strain Streptomyces microflavus DSM 40593 1
strain Streptomyces niveus NCIMB 11891 1
strain Streptomyces noursei ATCC 11455 1
strain Streptomyces peucetius subsp. caesius ATCC 27952 2 1
strain Streptomyces pratensis ATCC 33331 1
strain Streptomyces rapamycinicus NRRL 5491 1
strain Streptomyces roseochromogenus subsp. oscitans DS 12.976 1
strain Streptomyces scabiei 87.22 2 3
strain Streptomyces violaceusniger Tu 4113 3
strain Streptomyces viridosporus T7A 1
strain Streptomyces xinghaiensis S187 7 1
strain Streptosporangium roseum DSM 43021 12 1
strain Stutzerimonas balearica DSM 6083 1
strain Stutzerimonas stutzeri DSM 10701 1 1
strain Stutzerimonas stutzeri RCH2 1
strain Subdoligranulum variabile DSM 15176 22
strain Sulfuricella denitrificans skB26 13 1
strain Sulfuricurvum kujiense DSM 16994 4
strain Sulfurihydrogenibium azorense Az-Fu1 1
strain Sulfurimonas autotrophica DSM 16294 1
strain Sulfurimonas denitrificans DSM 1251 1
strain Sulfurimonas gotlandica GD1 1
strain Sulfuritalea hydrogenivorans sk43H 8 1
strain Sulfurospirillum barnesii SES-3 3
strain Sulfurospirillum deleyianum DSM 6946 1
strain Sulfurospirillum halorespirans DSM 13726 1
strain Sulfurospirillum multivorans DSM 12446 1
strain Sutterella wadsworthensis 2_1_59BFAA 3
strain Sutterella wadsworthensis 3_1_45B 7
strain Symbiobacterium thermophilum IAM 14863 43 4
strain Synechococcus elongatus PCC 11802 1
strain Synechococcus elongatus UTEX 3055 1
strain Syntrophobacter fumaroxidans MPOB 31 1
strain Syntrophobotulus glycolicus DSM 8271 40 1 1
strain Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 19 3
strain Syntrophotalea carbinolica DSM 2380 27 1
strain Syntrophothermus lipocalidus DSM 12680 1 1
strain Syntrophus aciditrophicus SB 7 4
strain Tannerella forsythia 3313 22
strain Tannerella forsythia 92A2 18 1 2
strain Tannerella forsythia KS16 41
strain Taylorella asinigenitalis MCE3 1
strain Tepidanaerobacter acetatoxydans Re1 17 1
strain Teredinibacter turnerae T7901 1
strain Terriglobus roseus DSM 18391 10 1
strain Terriglobus saanensis SP1PR4 2 3
strain Terrisporobacter glycolicus ATCC 14880 = DSM 1288 17 3
strain Tetrapisispora phaffii CBS 4417 1
strain Thalassospira xiamenensis M-5 = DSM 17429 5
strain Thauera aromatica K172 1 1
strain Thermacetogenium phaeum DSM 12270 16 1
strain Thermaerobacter marianensis DSM 12885 37 5
strain Thermanaeromonas toyohensis ToBE 1 3
strain Thermanaerovibrio acidaminovorans DSM 6589 18
strain Thermanaerovibrio velox DSM 12556 1
strain Thermincola potens JR 1 34 1 4
strain Thermoanaerobacter ethanolicus JW 200 1
strain Thermoanaerobacter italicus Ab9 1
strain Thermoanaerobacter mathranii subsp. mathranii str. A3 1
strain Thermoanaerobacter siderophilus SR4 1
strain Thermoanaerobacter wiegelii Rt8.B1 1
strain Thermoanaerobacterium thermosaccharolyticum DSM 571 1
strain Thermoanaerobacterium thermosaccharolyticum M0795 1
strain Thermoanaerobacterium xylanolyticum LX-11 10 2
strain Thermobacillus composti KWC4 38 1 1
strain Thermobaculum terrenum ATCC BAA-798 1
strain Thermobifida fusca YX 8 1
strain Thermobispora bispora DSM 43833 6 1
strain Thermochaetoides thermophila DSM 1495 1
strain Thermochromatium tepidum ATCC 43061 1
strain Thermococcus barophilus MP 4
strain Thermococcus gammatolerans EJ3 1
strain Thermocoleostomius sinensis A174 2
strain Thermocrinis albus DSM 14484 1
strain Thermodesulfatator indicus DSM 15286 1
strain Thermodesulfobacterium commune DSM 2178 1
strain Thermodesulfobacterium geofontis OPF15 1 1
strain Thermodesulfobium narugense DSM 14796 2
strain Thermodesulfovibrio yellowstonii DSM 11347 4 2
strain Thermoleptolyngbya sichuanensis A183 4
strain Thermomicrobium roseum DSM 5159 1
strain Thermomonospora curvata DSM 43183 19 4
strain Thermoplasma volcanium GSS1 1
strain Thermosediminibacter oceani DSM 16646 16 1
strain Thermosipho africanus TCF52B 1 1
strain Thermosynechococcus vestitus BP-1 1
strain Thermotoga caldifontis AZM44c09 1
strain Thermotoga profunda AZM34c06 2
strain Thermovibrio ammonificans HB-1 1 1
strain Thermovirga lienii DSM 17291 3
strain Thermus aquaticus Y51MC23 2 1
strain Thermus oshimai JL-2 8
strain Thermus scotoductus SA-01 3 1
strain Thioalkalivibrio nitratireducens DSM 14787 4 1
strain Thioalkalivibrio paradoxus ARh 1 3
strain Thioalkalivibrio sulfidiphilus HL-EbGr7 33
strain Thiobacillus denitrificans ATCC 25259 8 2
strain Thiocystis violascens DSM 198 14 3
strain Thioflavicoccus mobilis 8321 15 1
strain Thiomicrospira cyclica ALM1 1
strain Thomasclavelia ramosa DSM 1402 1 8
strain Thomasclavelia saccharogumia DSM 17460 19
strain Thomasclavelia spiroformis DSM 1552 13 13 2
strain Tistrella mobilis KA081020-065 11 2
strain Tolumonas auensis DSM 9187 31 1
strain Toxoplasma gondii VEG 1
strain Treponema brennaborense DSM 12168 38 5
strain Treponema denticola ATCC 35404 3
strain Treponema denticola ATCC 35405 10
strain Treponema denticola H1-T 3
strain Treponema denticola H-22 3
strain Treponema pedis str. T A4 16 4
strain Treponema primitia ZAS-2 27 1
strain Treponema succinifaciens DSM 2489 50 2
strain Trichlorobacter lovleyi SZ 37 5
strain Trichoderma virens FT-333 1
strain Trichodesmium erythraeum IMS101 3
strain Truepera radiovictrix DSM 17093 12
strain Trypanosoma congolense IL3000 1
strain Tsukamurella paurometabola DSM 20162 7 1
strain Turicibacter sanguinis PC909 10
strain Turneriella parva DSM 21527 1
strain Ureaplasma urealyticum serovar 10 str. ATCC 33699 1
strain Varibaculum cambriense DORA_20 3
strain Variovorax paradoxus B4 1 1
strain Variovorax paradoxus EPS 2 1
strain Variovorax paradoxus S110 1 3
strain Veillonella atypica ACS-134-V-Col7a 2
strain Veillonella atypica KON 1 2
strain Veillonella dispar ATCC 17748 6
strain Veillonella dispar DORA_11 4
strain Veillonella parvula ACS-068-V-Sch12 4
strain Veillonella parvula ATCC 17745 3
strain Veillonella parvula DSM 2008 1
strain Veillonella parvula HSIVP1 1 1
strain Veillonella rogosae JCM 15642 1
strain Veillonella sp. oral taxon 158 str. F0412 7
strain Verminephrobacter aporrectodeae subsp. tuberculatae At4 2
strain Verminephrobacter eiseniae EF01-2 3 1
strain Verrucomicrobium spinosum DSM 4136 = JCM 18804 1
strain Verticillium dahliae JR2 1
strain Vibrio atlanticus LGP32 1
strain Vibrio crassostreae 9CS106 1
strain Vibrio jasicida 090810c 1
strain Vibrio tubiashii ATCC 19109 1 1
strain Vibrio vulnificus NBRC 15645 = ATCC 27562 1
strain Waddlia chondrophila WSU 86-1044 1
strain Wallemia mellicola CBS 633.66 1
strain Weissella cibaria KACC 11862 1
strain Wickerhamomyces anomalus NRRL Y-366-8 1
strain Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon 1
strain Xanthobacter autotrophicus Py2 13 1
strain Xanthomonas albilineans GPE PC73 1
strain Xanthomonas oryzae pv. oryzicola BLS256 1
strain Xenorhabdus bovienii SS-2004 1
strain Xenorhabdus poinarii G6 1
strain Xylanibacter ruminicola 23 53 1 5
strain Xylanimonas cellulosilytica DSM 15894 5 1
strain Yersinia aldovae 670-83 1 3
strain Yersinia mollaretii ATCC 43969 3
strain Zunongwangia profunda SM-A87 2 1
subclass Actinobacteridae 3 313
subclass Agaricomycetidae 12 1 1 1
subclass Autobranchia 609 1
subclass Biddulphiophycidae 1
subclass Caenogastropoda 300 1 1
subclass Candidatus Actinomarinidae 3
subclass Chaetocerotophycidae 1
subclass Chaetothyriomycetidae 25 1 1 1
subclass Coccidia 2 5 2 1
subclass Corallinophycidae 1
subclass Digenea 2
subclass Dothideomycetidae 13 8 1
subclass Eucestoda 1 2
subclass Euglenophyceae 1
subclass Eurotiomycetidae 31 10 2 1 1 1
subclass Gregarinasina 1
subclass Hexacorallia 35 2 1
subclass Hypocreomycetidae 30 10 2 1 1 1
subclass Metakinetoplastina 1 1
subclass Nemaliophycidae 2 1
subclass Neopterygii 5
subclass Oscillatoriophycideae 3368 863 16 95 3 6 6 1 5 2 2 1
subclass Phallomycetidae 1
subclass Pleosporomycetidae 29 1 2 1 1
subclass Polyangia 726 132 1 83 1 4 4 1 2
subclass Pterygota 537 7 11 1 1 4 22 1
subclass Rhodymeniophycidae 1 8
subclass Sordariomycetidae 80 9 2
subclass Sphaerobacteridae 28 22 2
subclass Xylariomycetidae 1
subfamily Aglimvirinae 1
subfamily Aleocharinae 3
subfamily Aphidinae 7 22
subfamily Asinivirinae 1
subfamily Asteroideae 22
subfamily Azeredovirinae 2
subfamily Azotobacter group 17 2 59 2 1
subfamily Bacillinae 7 6 19 1 1
subfamily Betaherpesvirinae 1
subfamily Boletoideae 1
subfamily Boorivirinae 8 2
subfamily Bovinae 1
subfamily Bullavirinae 5 22
subfamily Bunaeinae 2
subfamily Chordopoxvirinae 1
subfamily Churivirinae 8 1
subfamily Crocidurinae 2
subfamily Crudevirinae 8
subfamily Cvivirinae 1
subfamily Diapheromerinae 1
subfamily Emmerichvirinae 1
subfamily Entiminae 1
subfamily Erigoninae 4
subfamily Euaesthetinae 4
subfamily Evacanthinae 1
subfamily Firstpapillomavirinae 1
subfamily Gammaherpesvirinae 7
subfamily Giardiinae 1 4
subfamily Gokushovirinae 3 1
subfamily Heteroderinae 1
subfamily Homininae 43 1 1
subfamily Leishmaniinae 1 1
subfamily Loutivirinae 8 1
subfamily Markadamsvirinae 1
subfamily Melobesioideae 1
subfamily Nemognathinae 2
subfamily Nepetoideae 14
subfamily Ounavirinae 1
subfamily Oxytelinae 5
subfamily Papilionoideae 1081 11 2 2 1 1 3
subfamily Parvovirinae 1
subfamily Peduovirinae 1
subfamily Peloderinae 1
subfamily Polysiphonioideae 1
subfamily Pomatiopsinae 2
subfamily Rakietenvirinae 2
subfamily Rhabditinae 1
subfamily Rotylenchulinae 1
subfamily Sepvirinae 1
subfamily Slopekvirinae 1
subfamily Solanoideae 3
subfamily Spounavirinae 1
subfamily Strigomonadinae 1
subfamily Studiervirinae 2
subfamily Tettigoniinae 1
subfamily Tevenvirinae 1 1
subfamily Theclinae 3
subfamily Trabyvirinae 4
subfamily Trapezitinae 20
subfamily Tylenchinae 1
subfamily Uncouvirinae 8 1
subfamily Unioninae 609 1
subfamily Vequintavirinae 1
subgenus Acetobacter subgen. Acetobacter 1 32 1 1 2
subgenus Aspergillus subgen. Circumdati 1 8 1 1
subgenus Aspergillus subgen. Cremei 1
subgenus Aspergillus subgen. Fumigati 1 8 1 1
subgenus Aspergillus subgen. Nidulantes 1 1
subgenus Leishmania 1
subgenus Nannomonas 1
subgenus Plasmodium (Haemamoeba) 4 1
subgenus Plasmodium (Laverania) 4 2
subgenus Plasmodium (Plasmodium) 5 2
subgenus Plasmodium (Vinckeia) 4 2
subgenus Schizotrypanum 1
subgenus Solanum subgen. Lycopersicon 1
subgenus Viannia 1
subkingdom Dikarya 96 14 12 2 10 2 6 3 3 1
suborder Actinomycineae 3 239
suborder Agaricineae 5
suborder Apansporoblastina 8
suborder Auchenorrhyncha 1
suborder Boletineae 1
suborder Candidatus Actinomarineae 3
suborder Caniformia 11 16
suborder Chloroflexineae 3 23 2 24 2 2
suborder Coniophorineae 1 1
suborder Coriobacterineae 3 341
suborder Cystobacterineae 176 604 91 1 1 5 1 2 1
suborder Eimeriorina 1 5 2 1
suborder Ensifera 1
suborder Gadoidei 6
suborder Glossata 20
suborder Halimedineae 1
suborder Haplorrhini 15 1 1
suborder Histionina 1
suborder Marasmiineae 1
suborder Massarineae 1
suborder Mucorineae 1 1
suborder Nannocystineae 314 63 19 3 3 1 1
suborder Ophryoglenina 1
suborder Ostreobineae 1
suborder Pleosporineae 11 2 1 1
suborder Polyphaga 3 9
suborder Rhabditina 1
suborder Roseiflexineae 2 23 61 1 2
suborder Ruminantia 1
suborder Schizophyllineae 6
suborder Sorangiineae 113 66 2 48 1 4 1 2
suborder Sphaerobacterineae 35 41 2
suborder Spirurina 1
suborder Sternorrhyncha 533 2 11 4 1 22
suborder Suillineae 1 1
suborder Terebratellidina 2
suborder Tylenchina 2
suborder Verophasmatodea 7 7 2 1 1
subphylum Agaricomycotina 37 10 1 10 1 3 1
subphylum Craniata 5 32 1 2 20
subphylum Glomeromycotina 1 1 2
subphylum Hexapoda 537 7 11 1 1 4 22 1
subphylum Intramacronucleata 1 1
subphylum Mortierellomycotina 1
subphylum Mucoromycotina 3 1
subphylum Pezizomycotina 95 10 2 2 1 1 1
subphylum Polyploviricotina 1 1
subphylum Pucciniomycotina 3 1 1
subphylum Rhynchonelliformea 2
subphylum Saccharomycotina 71 14 12 2 6 3
subphylum Streptophytina 1092 11 18 15 2 1 22 3 2
subphylum Taphrinomycotina 2 8 7
subphylum Ustilaginomycotina 19 8 2 1
subphylum Wallemiomycotina 1
subspecies [Actinomadura] parvosata subsp. kistnae 44 1 2
subspecies Acidovorax avenae subsp. avenae 15 3
subspecies Adlercreutzia equolifaciens subsp. celatus 1 9 9 9 6 3
subspecies Adlercreutzia equolifaciens subsp. equolifaciens 53 1 17 2
subspecies Aeromonas salmonicida subsp. pectinolytica 1
subspecies Aeromonas salmonicida subsp. salmonicida 1 1
subspecies Alicyclobacillus acidocaldarius subsp. acidocaldarius 40 3
subspecies Alistipes onderdonkii subsp. vulgaris 64 21 3 28 4
subspecies Bacillus subtilis subsp. subtilis 12 1
subspecies Beijerinckia indica subsp. indica 1 1
subspecies Bifidobacterium animalis subsp. animalis 37 1 1
subspecies Bifidobacterium animalis subsp. lactis 21 1 1
subspecies Bifidobacterium catenulatum subsp. kashiwanohense 942 3 60 64 12 5 1 3
subspecies Bifidobacterium longum subsp. infantis 63 9 1 26 8 3
subspecies Bifidobacterium longum subsp. longum 55 13 3 3
subspecies Bifidobacterium longum subsp. suillum 1 3
subspecies Bifidobacterium longum subsp. suis 3
subspecies Bifidobacterium pseudolongum subsp. globosum 12 3
subspecies Bifidobacterium pullorum subsp. gallinarum 5 249 246 1 2
subspecies Bifidobacterium pullorum subsp. saeculare 231 1 3
subspecies Burkholderia ubonensis subsp. mesacidophila 3
subspecies Caldanaerobacter subterraneus subsp. tengcongensis 36 2
subspecies Campylobacter fetus subsp. fetus 4
subspecies Campylobacter fetus subsp. testudinum 2 1
subspecies Campylobacter fetus subsp. venerealis 7
subspecies Campylobacter hyointestinalis subsp. lawsonii 1
subspecies Campylobacter jejuni subsp. doylei 1
subspecies Campylobacter jejuni subsp. jejuni 39 5
subspecies Campylobacter lari subsp. concheus 1
subspecies Campylobacter pinnipediorum subsp. caledonicus 1 1
subspecies Campylobacter pinnipediorum subsp. pinnipediorum 4 3
subspecies Candidatus Phytoplasma australasiaticum subsp. taiwanense 1
subspecies Carnobacterium inhibens subsp. gilichinskyi 7 3
subspecies Chryseobacterium aquaticum subsp. greenlandense 1
subspecies Clavibacter michiganensis subsp. insidiosus 1
subspecies Clavibacter michiganensis subsp. michiganensis 2
subspecies Clostridium estertheticum subsp. estertheticum 58 4
subspecies Coprobacter secundus subsp. similis 1 4
subspecies Corynebacterium afermentans subsp. afermentans 2
subspecies Corynebacterium afermentans subsp. lipophilum 3
subspecies Corynebacterium diphtheriae subsp. lausannense 42
subspecies Cronobacter dublinensis subsp. dublinensis 4 1
subspecies Cutibacterium acnes subsp. acnes 2 1
subspecies Desulfocurvibacter africanus subsp. africanus 45 1
subspecies Desulfosarcina ovata subsp. ovata 3
subspecies Desulfosarcina ovata subsp. sediminis 3
subspecies Dietzia kunjamensis subsp. schimae 5
subspecies Enterobacter cloacae subsp. cloacae 3 4 1 4
subspecies Enterobacter cloacae subsp. dissolvens 1
subspecies Enterobacter hormaechei subsp. hoffmannii 1 1
subspecies Enterobacter hormaechei subsp. hormaechei 8 1
subspecies Enterobacter hormaechei subsp. steigerwaltii 4
subspecies Faecalibacterium longum CLA-AA-H236 4
subspecies Faecalibacterium longum CLA-AA-H243 4
subspecies Fibrobacter succinogenes subsp. succinogenes 40 1
subspecies Fusobacterium necrophorum subsp. funduliforme 27 8 1
subspecies Fusobacterium necrophorum subsp. necrophorum 4
subspecies Fusobacterium nucleatum subsp. nucleatum 31 1
subspecies Geobacter sulfurreducens subsp. ethanolicus 1
subspecies Klebsiella pneumoniae subsp. pneumoniae 15 4 4 3
subspecies Klebsiella pneumoniae subsp. rhinoscleromatis 1
subspecies Klebsiella quasipneumoniae subsp. quasipneumoniae 2
subspecies Klebsiella quasipneumoniae subsp. similipneumoniae 2
subspecies Lacticaseibacillus paracasei subsp. paracasei 14 2 1
subspecies Lacticaseibacillus paracasei subsp. tolerans 1
subspecies Lactiplantibacillus plantarum subsp. plantarum 1
subspecies Lactobacillus delbrueckii subsp. allosunkii 1
subspecies Lactobacillus delbrueckii subsp. bulgaricus 16 9 3 7
subspecies Lactobacillus delbrueckii subsp. delbrueckii 2 1
subspecies Lactobacillus delbrueckii subsp. indicus 2
subspecies Lactobacillus delbrueckii subsp. lactis 9
subspecies Lactobacillus kefiranofaciens subsp. kefiranofaciens 3
subspecies Lactococcus cremoris subsp. cremoris 45 4 5
subspecies Lactococcus cremoris subsp. tructae 4
subspecies Lactococcus lactis subsp. hordniae 2
subspecies Lactococcus lactis subsp. lactis 48 8 6 15 3
subspecies Latilactobacillus sakei subsp. sakei 4 1
subspecies Legionella pneumophila subsp. pascullei 1
subspecies Legionella pneumophila subsp. pneumophila 1
subspecies Leifsonia xyli subsp. cynodontis 2 2
subspecies Leifsonia xyli subsp. xyli 4
subspecies Lentilactobacillus buchneri subsp. silagei 1 1
subspecies Leuconostoc gelidum subsp. gelidum 4 2
subspecies Leuconostoc mesenteroides subsp. cremoris 1 1
subspecies Leuconostoc mesenteroides subsp. dextranicum 1 1
subspecies Leuconostoc mesenteroides subsp. jonggajibkimchii 1 1
subspecies Leuconostoc mesenteroides subsp. mesenteroides 3 1 1
subspecies Leuconostoc mesenteroides subsp. sake 1
subspecies Levilactobacillus brevis subsp. gravesensis 5
subspecies Listeria ivanovii subsp. londoniensis 3
subspecies Mycobacterium intracellulare subsp. chimaera 1
subspecies Mycobacteroides abscessus subsp. bolletii 1
subspecies Mycoplasma capricolum subsp. capricolum 1
subspecies Mycoplasma capricolum subsp. capripneumoniae 1
subspecies Mycoplasma mycoides subsp. capri 1
subspecies Myroides odoratimimus subsp. xuanwuensis 1
subspecies Neisseria elongata subsp. glycolytica 2
subspecies Paenibacillus larvae subsp. larvae 1
subspecies Paenibacillus massiliensis subsp. panacisoli 1
subspecies Pantoea stewartii subsp. stewartii 1
subspecies Pasteurella multocida subsp. multocida 38 4
subspecies Pectobacterium carotovorum subsp. carotovorum 8 3
subspecies Photobacterium damselae subsp. piscicida 1
subspecies Photorhabdus laumondii subsp. laumondii 1
subspecies Plasmodium vinckei brucechwatti 1
subspecies Plasmodium yoelii killicki 1
subspecies Prochlorococcus marinus subsp. marinus 3
subspecies Prochlorococcus marinus subsp. pastoris 4
subspecies Propionibacterium freudenreichii subsp. freudenreichii 1
subspecies Propionibacterium freudenreichii subsp. shermanii 11 4 3
subspecies Proteus terrae subsp. cibarius 3 1
subspecies Pseudomonas chlororaphis subsp. aurantiaca 1
subspecies Pseudomonas chlororaphis subsp. piscium 1 1
subspecies Roseinatronobacter bogoriensis subsp. barguzinensis 8 1
subspecies Ruminiclostridium cellobioparum subsp. termitidis 3378 1 2 4
subspecies Salmonella enterica subsp. enterica 1 62 2 1 5 2
subspecies Salmonella enterica subsp. houtenae 2
subspecies Salmonella enterica subsp. salamae 4 3
subspecies Selenomonas ruminantium subsp. lactilytica 65 4
subspecies Staphylococcus capitis subsp. capitis 10
subspecies Staphylococcus hominis subsp. hominis 10 1
subspecies Staphylococcus saprophyticus ATCC 15305 2
subspecies Staphylococcus sciuri subsp. sciuri 1
subspecies Streptococcus anginosus subsp. anginosus 1
subspecies Streptococcus anginosus subsp. whileyi 23 1
subspecies Streptococcus constellatus subsp. constellatus 2
subspecies Streptococcus constellatus subsp. pharyngis 37 1
subspecies Streptococcus dysgalactiae subsp. dysgalactiae 48 1
subspecies Streptococcus dysgalactiae subsp. equisimilis 46 1
subspecies Streptococcus equi subsp. equi 5
subspecies Streptococcus equi subsp. zooepidemicus 63 1 1
subspecies Streptococcus gallolyticus subsp. gallolyticus 1 1
subspecies Streptococcus infantarius subsp. infantarius 7 2
subspecies Streptococcus oralis subsp. dentisani 44 1
subspecies Streptococcus oralis subsp. oralis 53
subspecies Streptococcus oralis subsp. tigurinus 2193 1 48 1 1 7
subspecies Streptomyces griseus subsp. griseus 5 1
subspecies Streptomyces hygroscopicus subsp. jinggangensis 1
subspecies Streptomyces lavendulae subsp. lavendulae 1 1
subspecies Streptomyces peucetius subsp. caesius 2 1
subspecies Streptomyces roseochromogenus subsp. oscitans 1
subspecies Streptoverticillium olivoreticuli subsp. olivoreticuli 4
subspecies Syntrophomonas wolfei subsp. wolfei 26 3
subspecies Thermoanaerobacter mathranii subsp. mathranii 1
subspecies Treponema socranskii subsp. buccale 44 1
subspecies Trypanosoma cruzi cruzi 1
subspecies Verminephrobacter aporrectodeae subsp. tuberculatae 2
subspecies Vibrio tapetis subsp. tapetis 1
subspecies Zymomonas mobilis subsp. mobilis 3 1
subtribe Ociminae 16
superclass Actinopterygii 5
superclass Sarcopterygii 5 35 1 2 20
superfamily Aphidoidea 7 22
superfamily Bacilloidea 7 6 4 1 1
superfamily Buccinoidea 7 1
superfamily Coccoidea 529 2 11 28 1 1
superfamily Curculionoidea 2
superfamily Filarioidea 1
superfamily Hesperioidea 20
superfamily Hominoidea 43 1 1
superfamily Laqueoidea 2
superfamily Membracoidea 1
superfamily Papilionoidea 3
superfamily Rhabditoidea 1
superfamily Salamandroidea 5 8 1 2
superfamily Schistosomatoidea 2
superfamily Staphylinoidea 3 8
superfamily Strongyloidoidea 2
superfamily Tettigonioidea 1
superfamily Trichostrongyloidea 2
superfamily Truncatelloidea 2
superfamily Tylenchoidea 1
superfamily Unionoidea 609 1
superfamily Viviparoidea 291 1 1
superkingdom Archaea 1199 361 229 39 36 18 3 24 17 4 9 1 7 6 2 2 2 1 1 1
superkingdom Bacteria 4653 1543 790 110 76 35 32 32 31 28 15 11 7 6 4 4 3 2 1 1
superkingdom Eukaryota 1677 16 32 79 20 3 16 25 12 3 6 3 3 2 1
superkingdom Viruses 35 10 1 12 23 4 7 3 1
superorder Amphiesmenoptera 20
superorder Atherinomorphae 1
superorder Batrachia 5 1 1 2
superorder Euarchontoglires 43 1 1
superorder Laurasiatheria 12 16
superorder Palaeoheterodonta 609 1
superphylum Chlamydiae/Verrucomicrobia group 3 246
superphylum Fibrobacteres/Acidobacteria group 1 116
TKR467 Streptomyces djakartensis 1
tribe Bacillini 7 6 19 1 1
tribe Buchnereae 12
tribe Celeuthetini 1
tribe Crotalarieae 1083 11 25 2 1 1 3
tribe Diapheromerini 1
tribe Evacanthini 1
tribe Halimedeae 1
tribe Herposiphonieae 1
tribe Liparocephalini 3
tribe Macrosiphini 7 22
tribe Millerieae 22
tribe Ocimeae 16
tribe Pterosiphonieae 1
tribe Rickettsieae 2799 285 70 4 11 6 1
tribe Sileneae 2
tribe Solaneae 3
tribe Theclini 3
tribe Wolbachieae 2 31 1 4 1

This is an Academic site. It generates theoretical models of what may benefit a specific microbiome results.

Explanations /Info /Descriptions are influenced by Large Language Models and may not be accurate and include some hallucinations.Please report any to us for correction.

Copyright 2016 - 2025 Lassesen Consulting, LLC[2007], DBA, Microbiome Prescription All rights served.
Permission to data scrap or reverse engineer is explicitly denied to all users.U.S.Code Title 18 PART I CHAPTER 47 § 1030, CETS No.185, CFAA
Use of data on this site is prohibited except under written license.There is no charge for individual personal use.Use for any commercial applications or research requires a written license.
Caveat emptor: Analysis and suggestions are based on modelling(and thus infererence ) based on studies.The data sources are usually given for those that wish to consider alternative inferences.theories and models.
Inventions /Methodologies on this site are Patent Pending.

Microbiome Prescription do not make any representations that data or analyses available on this site is suitable for human diagnostic purposes, for informing treatment decisions, or for any other purposes and accept no responsibility or liability whatsoever for such use.
This site is not in strict compliance with Personal Health Information Laws. [216.73.216 ]

Due to AI drones slamming this site, we have added IP blocking on excessive calls. Email us if you get blocked and send this [216.73.216 ]