Oxalobacter vibrioformis Details: NCBI 933080, gram-negative or unknown [species]

| DSM 5502| Oxalobacter vibrioformis| Oxalobacter vibrioformis Dehning and Schink 1990| strain WoOx3

1. Oxalate Metabolism: Oxalobacter vibrioformis is known to metabolize oxalate, converting it into formate and carbon dioxide. This metabolic activity may contribute to the regulation of oxalate levels in the gastrointestinal tract.

2. Potential Role in Kidney Stone Prevention: Oxalate is a key component of kidney stones. Some studies suggest that Oxalobacter species, including O. formigenes (closely related to O. vibrioformis), may play a role in reducing the risk of kidney stone formation by promoting the breakdown of oxalate in the gut. However, the specific impact of O. vibrioformis in this regard requires further research.

3. Association with Human Health: The relationship between Oxalobacter species and human health is an area of ongoing research. While some studies suggest a potential association between reduced levels of Oxalobacter and an increased risk of kidney stone formation, the evidence is not conclusive, and more research is needed.

4. Implications for Oxalate Absorption: Oxalobacter vibrioformis may influence the absorption of dietary oxalate in the intestine, potentially impacting the amount of oxalate that reaches the kidneys. This, in turn, could have implications for individuals prone to kidney stone formation.

Visuals of Interactions with other bacteria of the same rank

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Other Sources for more information:

• Immune Epitope Database
• The NCBI taxonomy database
• UniProt
• Immune Epitope Taxonomy Database (IEDB)
• AI Engines For more Details: Perplexity  Kagi Labs  You 

More Information

Statistics

NCBI

Data Punk

End Products Produced

Lab Reporting

Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.

Desired Levels Suggestions for Oxalobacter vibrioformis

• Frequency - how often do samples show this bacteria
• UD - An alternative statistical algorithm (which factors in the frequency)
• Kaltoft-Moldrup Heuristic Using uploaded data
• Lab Low and High are calculated using the formula that most labs use: Mean - 2 Standard Deviation to Mean + 2 Standard Deviation

These are values that are computed from lab specific samples (Patent Pending)

Lab	Frequency	UD-Low	UD-High	KM Low	KM High	Lab Low	Lab High	Mean	Median	Standard Deviation	Box Plot Low	Box Plot High	KM Percentile Low	KM Percentile High
Other Labs	0.22			1	593	0	638	126.4	13	260.9	1	593	14.3 %ile	71.4 %ile
biomesight	26.15	0	20	10	440	0	189	64.5	40	63.5	0	120	0 %ile	100 %ile
thryve	0.63			1	77	0	84	27.6	19	28.9	1	77	11.1 %ile	77.8 %ile

External Reference Ranges for Oxalobacter vibrioformis

Oxalobacter vibrioformis (NCBI 933080) per million

Source of Ranges	Low Boundary	High Boundary	Low Boundary %age	High Boundary %age

Statistic by Lab Source for Oxalobacter vibrioformis

These desired values are reported from the lab reports

Lab	Frequency Seen	Average	Standard Deviation	Sample Count	Lab Samples
BiomeSight	28.532 %	0.006 %	0.006 %	1331.0	4665
CerbaLab	66.667 %	0 %	0 %	2.0	3
Medivere	37.5 %	0.021 %	0.033 %	3.0	8
Thryve	0.454 %	0.003 %	0.004 %	7.0	1543

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Data Contradictions — Limits of Certainity

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General Substance	Specific Substance	Effect
Amino Acid and similar	2-Amino-5-(carbamoylamino)pentanoic acid {Citrulline}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Amino Acid and similar	Epicatechin {Green tea polyphenol}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Caffeine	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Citrus aurantiifolia {Lime}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Citrus limon {Lemon}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Coffee	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Cola aspartame {Diet Cola}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	green tea	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	oolong teas	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	tea	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	β-lactoglobulin {Whey}	1 Studies recorded. The consensus is Increases📓, Click for details.
Herb or Spice	Camellia Linnaeus {camellia}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics	bacillus subtilis {B.Subtilis }	1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics	bacillus,lactobacillus,streptococcus,saccharomyces probiotic	1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics	Lactobacillus plantarum {L. plantarum}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics	Saccharomyces cerevisiae var boulardii {S. boulardii}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Vitamins, Minerals and similar	ascorbic acid {Vitamin C}	1 Studies recorded. The consensus is Increases👶, Click for details.
Vitamins, Minerals and similar	Calcium {Calcium Supplements}	1 Studies recorded. The consensus is Increases👶, Click for details.
Vitamins, Minerals and similar	Magnesium Compounds {Magnesium supplements}	1 Studies recorded. The consensus is Increases👶, Click for details.