Atopobium Details: NCBI 1380, high G+C gram-positive [genus]

| Atopobium| Atopobium Collins and Wallbanks 1993 emend. Cools et al. 2014

1. Oral Microbiota: Atopobium species are part of the normal oral microbiota. They play a role in the microbial balance within the oral cavity. However, imbalances in the oral microbiota can contribute to oral health issues, including periodontal disease and dental caries.

2. Urogenital Microbiota: Atopobium vaginae, in particular, is a species associated with the urogenital tract, especially in women. It has been implicated in bacterial vaginosis (BV), a condition characterized by an imbalance in the vaginal microbiota. BV can lead to symptoms such as abnormal vaginal discharge and an increased risk of certain infections.

Visuals of Interactions with other bacteria of the same rank

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Other Sources for more information:

• Immune Epitope Database
• The NCBI taxonomy database
• UniProt
• Immune Epitope Taxonomy Database (IEDB)
• AI Engines For more Details: Perplexity  Kagi Labs  You 

More Information

Statistics

NCBI

Data Punk

End Products Produced

Lab Reporting

Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.

Desired Levels Suggestions for Atopobium

• Frequency - how often do samples show this bacteria
• UD - An alternative statistical algorithm (which factors in the frequency)
• Kaltoft-Moldrup Heuristic Using uploaded data
• Lab Low and High are calculated using the formula that most labs use: Mean - 2 Standard Deviation to Mean + 2 Standard Deviation

These are values that are computed from lab specific samples (Patent Pending)

Lab	Frequency	UD-Low	UD-High	KM Low	KM High	Lab Low	Lab High	Mean	Median	Standard Deviation	Box Plot Low	Box Plot High	KM Percentile Low	KM Percentile High
Other Labs	0.75			3	1947	0	1309	259.8	33	535.1	3	1947	0 %ile	100 %ile
biomesight	32.27	0	20	10	450	0	722	94.7	30	320	10	90	0 %ile	96.6 %ile
thorne	13.79			1	15	0	21	7	6	7.1	1	15	16.7 %ile	66.7 %ile
thryve	39.98	0	21	1	568	0	1283	127.1	32	589.5	10	108	0 %ile	97.1 %ile
ubiome	12.42	0		19	13930	0	3974	554.1	101	1744.8	0	553	0 %ile	100 %ile

External Reference Ranges for Atopobium

Atopobium (NCBI 1380) per million

Source of Ranges	Low Boundary	High Boundary	Low Boundary %age	High Boundary %age
PrecisionBiome	1.943089228007011E-05	0.00035969234886579216	0	0

Statistic by Lab Source for Atopobium

These desired values are reported from the lab reports

Lab	Frequency Seen	Average	Standard Deviation	Sample Count	Lab Samples
BiomeSight	32.682 %	0.01 %	0.062 %	1521.0	4654
BiomeSightRdp	9.677 %	0.003 %	0.001 %	3.0	31
CerbaLab	66.667 %	0.005 %	0.001 %	2.0	3
CosmosId	9.375 %	0.004 %	0.003 %	3.0	32
es-xenogene	6.25 %	0.001 %	0.001 %	2.0	32
Medivere	37.5 %	0.003 %	0.001 %	3.0	8
Microba	3.571 %	0.013 %	%	1.0	28
Precision	25 %	0 %	%	1.0	4
SequentiaBiotech	8.571 %	0.13 %	0.056 %	3.0	35
Thorne	4.124 %	0.001 %	0.001 %	12.0	291
Thryve	41.542 %	0.014 %	0.055 %	641.0	1543
uBiome	12.219 %	0.055 %	0.174 %	98.0	802

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Data Contradictions — Limits of Certainity

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General Substance	Specific Substance	Effect
Antibiotics, Antivirals etc	rifaximin	1 Studies recorded. The consensus is Increases👶, Click for details.
Common and OTC Supplements	long-term, moderate-intensity exercise {exercise}	1 Studies recorded. The consensus is Increases👶, Click for details.
Common and OTC Supplements	Tributyrin	1 Studies recorded. The consensus is Decreases👶, Click for details.
Diet Style	high-fat diets	1 Studies recorded. The consensus is Decreases📓, Click for details.
Diet Style	ketogenic diet	1 Studies recorded. The consensus is Increases👶, Click for details.
Diet Style	Slow digestible carbohydrates. {Low Glycemic}	3 Studies recorded. The consensus is Increases👶, Click for details.
Diet Style	whole-grain diet	2 Studies recorded. The consensus is Increases👶, Click for details.
Flavonoids, Polyphenols etc	2-(3,4-Dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one {Luteolin}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	5,7-Dihydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one {Apigenin }	1 Studies recorded. The consensus is Increases📓, Click for details.
Flavonoids, Polyphenols etc	Humulus lupulus compound {Xanthohumol}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	quebracho	1 Studies recorded. The consensus is Decreases👶, Click for details.
Food (excluding seasonings)	2-hydroxypropane-1,2,3-tricarboxylic acid {Citric acid}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Abstention from eating {Fasting}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	amaranthus {amaranth}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Avena sativa {Oats}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Avena sativa x Hordeum vulgare {barley,oat}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Bovine Milk Products {Dairy}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	henopodium quinoa {Quinoa}	3 Studies recorded. The consensus is Increases👶📓, Click for details.
Food (excluding seasonings)	Humulus lupulus {Hops}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Lupinus {Lupin[Warning]}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Outer Layers of Triticum aestivum {Wheat Bran}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	pectin {pectin}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	pseudo-cereals {amaranth,quinoa, taro,buckwheat}	2 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Pulses, Beans	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Rheum × hybridum {Rhubarb}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	wheat	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	yogurt	3 Studies recorded. The consensus is Increases👶, Click for details.
Herb or Spice	3,4-dihydroxyphenyllactic acid {Rosmarinic acid}	1 Studies recorded. The consensus is Increases📓, Click for details.
Herb or Spice	Citrus Fruit Extract	1 Studies recorded. The consensus is Decreases📓, Click for details.
Herb or Spice	Hypericum perforatum {St. John's Wort}	1 Studies recorded. The consensus is Increases📓, Click for details.
Herb or Spice	Pentadigalloylglucose {Tannic Acid}	1 Studies recorded. The consensus is Decreases👶, Click for details.
Prebiotics and similar	(2->1)-beta-D-fructofuranan {Inulin}	1 Studies recorded. The consensus is Increases👶, Click for details.
Prebiotics and similar	Human milk oligosaccharides (prebiotic, Holigos, Stachyose)	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	oligosaccharides {oligosaccharides}	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	ß-glucan {Beta-Glucan}	1 Studies recorded. The consensus is Increases👶, Click for details.
Prescription - Other	metformin (prescription)	1 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	bifidobacterium	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	Bifidobacterium animalis {B. animalis}	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	Bifidobacterium animalis subsp. lactis {B. Lactis}	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	bifidobacterium lactis,streptococcus thermophilus probiotic	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	enterococcus faecium {E. faecium}	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	Lacticaseibacillus casei {L. casei}	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	Lacticaseibacillus paracasei {L.paracasei}	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	Lacticaseibacillus paracasei shirota {Yakult}	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	lactobacillus paracasei,lactobacillus acidophilus,bifidobacterium animalis	2 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	lactobacillus rhamnosus gg,bifidobacterium animalis lactis ,lactobacillus paracasei {cvs maximum strength probiotic}	2 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	Latilactobacillus sakei {Lactobacillus sakei}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics	Probiotic Mixture 1 {Japanese Vet Probiotic}	1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics	Probiotic Mixture 2 {Vetafarm Probotic}	1 Studies recorded. The consensus is Increases👶, Click for details.
Sugar and similar	Agave salmiana {Agavins}	1 Studies recorded. The consensus is Increases👶, Click for details.
Vitamins, Minerals and similar	Sodium hypochlorite {Chlorinated Drinking Water}	1 Studies recorded. The consensus is Decreases👶, Click for details.

Food Groups Containing the Atopobium bacteria

This is base on Unexplored microbial diversity from 2,500 food metagenomes and links with the human microbiome. See that paper for details on foods groups.

1. alcohol : 100% of Highest

Foods Containing the Atopobium bacteria

Data comes from FoodMicrobionet. For the meaning of weight, see that site. The bacteria does not need to be alive to have an effect.

Swiss-Dutch-type cheese Weight: 2.011 Chinese fish sauce Weight: 0.01585 BZ Liqvan cheese cheese farm B Weight: 0.01076 Sausage, Cyprus: Limassol Weight: 0.002111