Actinomyces Details: NCBI 1654, high G+C gram-positive [genus]

Found in Oral Cavity

For the possible significance see Oral bacteria relative abundance in faeces increases due to gut microbiota depletion and is linked with patient outcomes, 2024


| "Actinocladothrix" Affanassieff and Schulz 1889| "Discomyces" Rivolta 1878| Actinocladothrix| Actinomyces| Actinomyces Harz 1877 (Approved Lists 1980) emend. Nouioui et al. 2018| Discomyces

  1. Normal Flora:

    • Many Actinomyces species are part of the normal microbial flora in the oral cavity, gastrointestinal tract, and genital tract of humans. In these settings, they contribute to the balance of the microbiota and may have beneficial roles.
  2. Pathogenic Potential:

    • While Actinomyces species are generally commensal, some can become opportunistic pathogens. Actinomyces species can cause infections, most notably actinomycosis. Actinomycosis is a chronic suppurative and granulomatous infection that can occur in various body sites, including the cervicofacial area, thorax, abdomen, and pelvis.
  3. Actinomycosis:

    • Actinomycosis is characterized by the formation of abscesses, draining sinuses, and the presence of characteristic sulfur granules in the affected tissues. The condition often arises due to disruption of mucosal barriers, allowing Actinomyces to invade deeper tissues. Cervicofacial actinomycosis is one of the more common forms.
  4. Dental Health:

    • Actinomyces species are commonly found in dental plaque and can be involved in dental caries and periodontal diseases. Maintaining good oral hygiene is important to prevent the overgrowth of potentially pathogenic bacteria.
  5. Pelvic Inflammatory Disease (PID):

    • In the genital tract, Actinomyces species have been associated with pelvic inflammatory disease (PID), particularly in women with intrauterine devices (IUDs). This is considered a rare complication.
  6. Endocarditis:

    • Actinomyces species have been implicated in infective endocarditis, particularly in individuals with pre-existing heart valve abnormalities.
  7. Treatment:

    • Actinomycosis is typically treated with prolonged courses of antibiotics, often involving penicillin or other beta-lactam antibiotics. Surgical drainage and debridement may be necessary in severe cases.

Visuals of Interactions with other bacteria of the same rank

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More Information
Statistics NCBI Data Punk End Products Produced

Lab Reporting

Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.

Desired Levels Suggestions for Actinomyces

These are values that are computed from lab specific samples (Patent Pending)
LabFrequencyUD-LowUD-HighKM LowKM HighLab LowLab HighMean MedianStandard DeviationBox Plot LowBox Plot High KM Percentile Low KM Percentile High
Other Labs 3 0 0 7 7130 0 2644 473.5 100 1107.6 0 836 0 %ile 100 %ile
biomesight 68.02 0 70 10 880 0 1531 172.7 60 692.8 0 180 2.3 %ile 97.4 %ile
thorne 100 36 378 0 294 133.5 98 82 72 294 0 %ile 100 %ile
thryve 78.7 0 119 18 789 0 1261 183.4 78 550 0 227 7.2 %ile 96.6 %ile
ubiome 73.38 0 196 15 1769 0 5355 585.5 146 2433.6 0 490 0 %ile 95.9 %ile

External Reference Ranges for Actinomyces

Actinomyces (NCBI 1654) per million
Source of Ranges Low Boundary High Boundary Low Boundary %age High Boundary %age
Thorne (20/80%ile) 0 80.71 0 0.0081
Lab Teletest 0 500 0 0.05
Metagenomics 0 10000 0 1
PrecisionBiome 0.00019181544485036284 0.008432741276919842 0 0
Statistic by Lab Source for Actinomyces
These desired values are reported from the lab reports
Lab Frequency Seen Average Standard Deviation Sample Count Lab Samples
AmericanGut 20 %   0.015 %  0.018 % 3.0 15
BiomeSight 68.888 %   0.016 %  0.086 % 3235.0 4696
BiomeSightRdp 29.032 %   0.011 %  0.02 % 9.0 31
bugspeak 100 %   0.016 %  % 1.0 1
CerbaLab 66.667 %   0.011 %  0.005 % 2.0 3
CosmosId 87.5 %   0.078 %  0.161 % 28.0 32
custom 10.39 %   0.003 %  0.002 % 8.0 77
es-xenogene 18.75 %   0.016 %  0.013 % 6.0 32
Medivere 87.5 %   0.004 %  0.002 % 7.0 8
Precision 100 %   0.002 %  0.002 % 4.0 4
SequentiaBiotech 28.571 %   0.079 %  0.062 % 10.0 35
Thorne 94.198 %   0.007 %  0.006 % 276.0 293
Thryve 79.78 %   0.018 %  0.07 % 1231.0 1543
Tiny 16.667 %   0.009 %  0.001 % 2.0 12
uBiome 72.195 %   0.059 %  0.243 % 579.0 802
vitract 100 %   0.008 %  0.007 % 2.0 2

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Data Contradictions — Limits of Certainity

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General Substance Specific Substance Effect
Amino Acid and similar 4-O-a-glucopyranosyl-D-sorbitol {maltitol} 3 Studies recorded. The consensus is Increases👶👪, Click for details.
Antibiotics, Antivirals etc azithromycin,[CFS] 1 Studies recorded. The consensus is Decreases👶, Click for details.
Antibiotics, Antivirals etc metronidazole [CFS] 1 Studies recorded. The consensus is Increases👶, Click for details.
Common and OTC Supplements 3,3',4',5,7-pentahydroxyflavone {Quercetin} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Common and OTC Supplements acetylsalicylic acid,aspirin 1 Studies recorded. The consensus is Increases👶, Click for details.
Common and OTC Supplements long-term, moderate-intensity exercise {exercise} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Diet Style dietary fiber 1 Studies recorded. The consensus is Decreases👪, Click for details.
Diet Style Fiber, total dietary 1 Studies recorded. The consensus is Decreases👪, Click for details.
Diet Style High-fibre diet {Whole food diet} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Diet Style low carbohydrate diet 1 Studies recorded. The consensus is Increases📓, Click for details.
Diet Style Slow digestible carbohydrates. {Low Glycemic} 3 Studies recorded. The consensus is Increases👶👪, Click for details.
Diet Style whole-grain diet 2 Studies recorded. The consensus is Increases👶, Click for details.
Flavonoids, Polyphenols etc Humulus lupulus compound {Xanthohumol} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Food (excluding seasonings) Avena sativa {Oats} 1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings) Avena sativa x Hordeum vulgare {barley,oat} 1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings) blueberry 1 Studies recorded. The consensus is Decreases👶, Click for details.
Food (excluding seasonings) Bovine Milk Products {Dairy} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Food (excluding seasonings) fruit 1 Studies recorded. The consensus is Decreases👪, Click for details.
Food (excluding seasonings) fruit/legume fibre 1 Studies recorded. The consensus is Decreases👪, Click for details.
Food (excluding seasonings) Honey {Honey } 1 Studies recorded. The consensus is Decreases👶, Click for details.
Food (excluding seasonings) Laurus nobilis {Bay Leaf} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Food (excluding seasonings) Lentinula edodes {Shiitake Mushroom} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Food (excluding seasonings) Nicotine, Nicotine Patch 1 Studies recorded. The consensus is Decreases👶, Click for details.
Food (excluding seasonings) pectin {pectin} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Food (excluding seasonings) Propolis {Bee glue} 2 Studies recorded. The consensus is Decreases👶👪, Click for details.
Food (excluding seasonings) Ribes nigrum {black currant} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Food (excluding seasonings) Vaccinium {Cranberry} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Food (excluding seasonings) yogurt 1 Studies recorded. The consensus is Decreases👶, Click for details.
Food Preservatives (3S,4R,5S)-1,3,4,5,6-Pentahydroxyhexan-2-one {Sorbose} 1 Studies recorded. The consensus is Increases👶, Click for details.
Food Preservatives 2H-1?6,2-benzothiazol-1,1,3-trione {Saccharin} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Herb or Spice 5,6-dihydro-9,10-dimethoxybenzo[g]-1,3-benzodioxolo[5,6-a]quinolizinium {Berberine} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Herb or Spice Boswellia serrata {Boswellia} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Herb or Spice coptis chinensis {Chinese goldthread } 1 Studies recorded. The consensus is Decreases👪, Click for details.
Herb or Spice Cymbopogon citratus {Lemongrass} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Herb or Spice Dendrobium officinale Kimura {Tiepishihu} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Herb or Spice Diferuloylmethane {Curcumin} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Herb or Spice Menta × piperita {peppermint} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Herb or Spice Mentha spicata {Spearmint} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Herb or Spice Metha family {Mint} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Herb or Spice Panax ... {Ginseng} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Herb or Spice Pimpinella anisum {Anise} 2 Studies recorded. The consensus is Decreases👪, Click for details.
Herb or Spice Rhus coriaria {Sumac} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Herb or Spice Thymus vulgaris {thyme} 2 Studies recorded. The consensus is Decreases👪, Click for details.
Miscellaneous, food additives, and other odd items Ethyl alcohol {Grain alcohol} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Miscellaneous, food additives, and other odd items Sleep apnea {partial sleep deprivation} 1 Studies recorded. The consensus is Increases👶, Click for details.
Miscellaneous, food additives, and other odd items Tobacco consumption {Smoking} 2 Studies recorded. The consensus is Increases👶, Click for details.
Not Classified Mycotoxins {Home Dampness} 1 Studies recorded. The consensus is Increases👪, Click for details.
Not Classified Nitrogen Oxide x Particulate Matter {Urban air pollutant} 1 Studies recorded. The consensus is Increases👶, Click for details.
Prebiotics and similar (2->1)-beta-D-fructofuranan {Inulin} 1 Studies recorded. The consensus is Increases👶, Click for details.
Prebiotics and similar Pistacia lentiscus {mastic gum} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Probiotics bacillus 1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics bacillus subtilis,lactobacillus acidophilus 1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics bacillus,lactobacillus,streptococcus,saccharomyces probiotic 1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics bifidobacterium 1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics Bifidobacterium animalis {B. animalis} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics Bifidobacterium animalis subsp. lactis {B. Lactis} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics bifidobacterium lactis,streptococcus thermophilus probiotic 1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics Lacticaseibacillus rhamnosus {l. rhamnosus} 1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics Lactobacillus gasseri {L.gasseri} 1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics lactobacillus helveticus,lactobacillus rhamnosus 1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics lactobacillus paracasei,lactobacillus acidophilus,bifidobacterium animalis 1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics lactobacillus rhamnosus gg,bifidobacterium animalis lactis ,lactobacillus paracasei {cvs maximum strength probiotic} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics Limosilactobacillus fermentum {L. fermentum} 1 Studies recorded. The consensus is Increases👶, Click for details.
Probiotics Limosilactobacillus reuteri {L. Reuteri} 1 Studies recorded. The consensus is Increases👶, Click for details.
Sugar and similar D-glucose {Glucose} 1 Studies recorded. The consensus is Decreases👶, Click for details.
Sugar and similar Sucralose {Splenda} 1 Studies recorded. The consensus is Decreases👪, Click for details.
Vitamins, Minerals and similar Zinc {Zinc Supplements} 1 Studies recorded. The consensus is Decreases👶, Click for details.

Food Groups Containing the Actinomyces bacteria

This is base on Unexplored microbial diversity from 2,500 food metagenomes and links with the human microbiome. See that paper for details on foods groups.

  1. fermented_fruits_and_vegetables : 100% of Highest
  2. other : 80.5639644% of Highest
  3. dairy : 28.6882669% of Highest
  4. fermented_tubers_and_roots : 17.8916672% of Highest
  5. fermented_meat : 0.5840353% of Highest

Foods Containing the Actinomyces bacteria

Data comes from FoodMicrobionet. For the meaning of weight, see that site. The bacteria does not need to be alive to have an effect.

Cheese with dietary fibers Weight: 3.772 Betlehem cheese Weight: 1.003 Colonial cheese, cow milk Weight: 0.6589 Passito wine Weight: 0.22 Malaysian fermented fish sauce Weight: 0.156 Curd cheese, cow milk Weight: 0.145 Caipira cheese Weight: 0.1354 Piedmont hard cheese Weight: 0.1277 Reblochon Cheese (France) Weight: 0.1204 Kefir grain Weight: 0.1145 Soumaintrain Cheese(France) Weight: 0.0688 Serrano cheese, cow milk Weight: 0.06614 Tej, Ethiopia Weight: 0.06014 Beer Sour Flanders Red Ale Weight: 0.05061 Cheese Weight: 0.04121 Campo das Vertentes cheese Weight: 0.03102 Dehulled maize dough fermented 12h, Ghana Weight: 0.02934 Swiss-Dutch-type cheese Weight: 0.02789 Trentingrana Cheese (Italy) Weight: 0.02775 fermented Hakarl Weight: 0.02342 Teff dough fermented Weight: 0.0227 Dehulled maize dough, Ghana Weight: 0.02243 Ham fermented for 4 years Weight: 0.02173 DZ Liqvan cheese cheese farm D Weight: 0.01519 Sausage, Cyprus: Limassol Weight: 0.009786 Ogi from maize, Nigeria Weight: 0.008714 Ghee, Uganda Weight: 0.007271 Fermented finger millet Weight: 0.007212 Paipa cheese Weight: 0.006381 Chinese fish sauce Weight: 0.005688 yoghurt fermentation Weight: 0.002454

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